Carg03920 (gene) Silver-seed gourd

Overview
NameCarg03920
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionEG45-like domain containing protein
LocationCucurbita_argyrosperma_scaffold_011 : 805654 .. 806186 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGTCCTCGTCGTCGTCTTCTTCTTCACGCACATTTCCATGGCTCGAGGAGACATTGGCACGGCCACAGCCTATGGCCCTCCATATCTACGTAAGTAAAGGATCAAATGATTTTAACGATAATTGAATGGTGATTGACATTTTAATGGGTGTTGTGTTGTAGCCACCCTATGTAATGGGAACCGCGTCGATCAGTTCCCACCTGGCAACCTCTTCGTGGCAGTGAATGAAGGGCTCTGGGACAACGGCGCTGCTTGCGGTCGACGTTATAGATTAAGATGTTTGAGCGGACGAAACCACCCATGCAAGACTGATATCATTGAAGTTCAGGTGGTGAACTTCTGCCCCAAGTCCCCGTGCCCCTCTTCCTTTCTCATGTCCAAAGAGGCCTTCGCAGCTATCTCTCGCCTCCCCAATGCTAGACTCAACGTCGAGTATATCGAGTACGTAATCTTCTCTCTTCTTCAACATCGAGATTAATTATACATAACTGATTTTGATTCATTTGTTGGTTTCTATGCAGAATATAA

mRNA sequence

ATGGCTGTCCTCGTCGTCGTCTTCTTCTTCACGCACATTTCCATGGCTCGAGGAGACATTGGCACGGCCACAGCCTATGGCCCTCCATATCTACCCACCCTATGTAATGGGAACCGCGTCGATCAGTTCCCACCTGGCAACCTCTTCGTGGCAGTGAATGAAGGGCTCTGGGACAACGGCGCTGCTTGCGGTCGACGTTATAGATTAAGATGTTTGAGCGGACGAAACCACCCATGCAAGACTGATATCATTGAAGTTCAGGTGGTGAACTTCTGCCCCAAGTCCCCGTGCCCCTCTTCCTTTCTCATGTCCAAAGAGGCCTTCGCAGCTATCTCTCGCCTCCCCAATGCTAGACTCAACGTCGAGTATATCGAAATATAA

Coding sequence (CDS)

ATGGCTGTCCTCGTCGTCGTCTTCTTCTTCACGCACATTTCCATGGCTCGAGGAGACATTGGCACGGCCACAGCCTATGGCCCTCCATATCTACCCACCCTATGTAATGGGAACCGCGTCGATCAGTTCCCACCTGGCAACCTCTTCGTGGCAGTGAATGAAGGGCTCTGGGACAACGGCGCTGCTTGCGGTCGACGTTATAGATTAAGATGTTTGAGCGGACGAAACCACCCATGCAAGACTGATATCATTGAAGTTCAGGTGGTGAACTTCTGCCCCAAGTCCCCGTGCCCCTCTTCCTTTCTCATGTCCAAAGAGGCCTTCGCAGCTATCTCTCGCCTCCCCAATGCTAGACTCAACGTCGAGTATATCGAAATATAA

Protein sequence

MAVLVVVFFFTHISMARGDIGTATAYGPPYLPTLCNGNRVDQFPPGNLFVAVNEGLWDNGAACGRRYRLRCLSGRNHPCKTDIIEVQVVNFCPKSPCPSSFLMSKEAFAAISRLPNARLNVEYIEI
Homology
[Close]
BLAST of Carg03920 vs. NCBI nr
Match: XP_022951412.1 (EG45-like domain containing protein [Cucurbita moschata])

HSP 1 Score: 264.6 bits (675), Expect = 1.7e-67
Identity = 124/126 (98.41%), Postives = 126/126 (100.00%), Query Frame = 0 

Query: 1   MAVLVVVFFFTHISMARGDIGTATAYGPPYLPTLCNGNRVDQFPPGNLFVAVNEGLWDNG 60
           MA+L+VVFFFTHISMARGDIGTATAYGPPYLPTLCNGNRVDQFPPGNLFVAVNEGLWDNG
Sbjct: 8   MALLLVVFFFTHISMARGDIGTATAYGPPYLPTLCNGNRVDQFPPGNLFVAVNEGLWDNG 67

Query: 61  AACGRRYRLRCLSGRNHPCKTDIIEVQVVNFCPKSPCPSSFLMSKEAFAAISRLPNARLN 120
           AACGRRYRLRCLSGRNHPCKTDIIEVQVVNFCPKSPCPSSFLMSKEAFAAISRLPNARLN
Sbjct: 68  AACGRRYRLRCLSGRNHPCKTDIIEVQVVNFCPKSPCPSSFLMSKEAFAAISRLPNARLN 127

Query: 121 VEYIEI 127
           VEYIEI
Sbjct: 128 VEYIEI 133

[Close]
BLAST of Carg03920 vs. NCBI nr
Match: XP_023537855.1 (EG45-like domain containing protein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 260.0 bits (663), Expect = 4.2e-66
Identity = 120/123 (97.56%), Postives = 123/123 (100.00%), Query Frame = 0 

Query: 3   VLVVVFFFTHISMARGDIGTATAYGPPYLPTLCNGNRVDQFPPGNLFVAVNEGLWDNGAA 62
           ++VVVFFFTH+SMARGDIGTATAYGPPYLPTLCNGNRVDQFPPGNLFVAVNEGLWDNGAA
Sbjct: 4   LIVVVFFFTHVSMARGDIGTATAYGPPYLPTLCNGNRVDQFPPGNLFVAVNEGLWDNGAA 63

Query: 63  CGRRYRLRCLSGRNHPCKTDIIEVQVVNFCPKSPCPSSFLMSKEAFAAISRLPNARLNVE 122
           CGRRYRLRCLSGRNHPCKTDIIEVQVVNFCPKSPCPSSFLMSKEAFAAISRLPNARLNVE
Sbjct: 64  CGRRYRLRCLSGRNHPCKTDIIEVQVVNFCPKSPCPSSFLMSKEAFAAISRLPNARLNVE 123

Query: 123 YIE 126
           YIE
Sbjct: 124 YIE 126

[Close]
BLAST of Carg03920 vs. NCBI nr
Match: XP_023002547.1 (EG45-like domain containing protein [Cucurbita maxima])

HSP 1 Score: 249.2 bits (635), Expect = 7.4e-63
Identity = 115/123 (93.50%), Postives = 118/123 (95.93%), Query Frame = 0 

Query: 4   LVVVFFFTHISMARGDIGTATAYGPPYLPTLCNGNRVDQFPPGNLFVAVNEGLWDNGAAC 63
           L+VVFFF HISMARGDIG AT YGPPYLPTLCNGNR+DQFPPGNLFVAVNEGLWDNGAAC
Sbjct: 10  LLVVFFFKHISMARGDIGMATTYGPPYLPTLCNGNRIDQFPPGNLFVAVNEGLWDNGAAC 69

Query: 64  GRRYRLRCLSGRNHPCKTDIIEVQVVNFCPKSPCPSSFLMSKEAFAAISRLPNARLNVEY 123
           GRRYR+RCLSGRNHPCKTDIIEVQVVN CPKSPCPSSFLMSKEAF AISRLPNARLNVEY
Sbjct: 70  GRRYRIRCLSGRNHPCKTDIIEVQVVNVCPKSPCPSSFLMSKEAFRAISRLPNARLNVEY 129

Query: 124 IEI 127
           IEI
Sbjct: 130 IEI 132

[Close]
BLAST of Carg03920 vs. NCBI nr
Match: XP_008445199.1 (PREDICTED: EG45-like domain containing protein [Cucumis melo])

HSP 1 Score: 229.9 bits (585), Expect = 4.6e-57
Identity = 104/117 (88.89%), Postives = 109/117 (93.16%), Query Frame = 0 

Query: 10  FTHISMARGDIGTATAYGPPYLPTLCNGNRVDQFPPGNLFVAVNEGLWDNGAACGRRYRL 69
           F H+SMA  DIGTAT YGPPYLPT CNGN ++QFPPGNLFVAVNEGLWDNGAACGRRYRL
Sbjct: 13  FKHVSMALADIGTATPYGPPYLPTQCNGNSIEQFPPGNLFVAVNEGLWDNGAACGRRYRL 72

Query: 70  RCLSGRNHPCKTDIIEVQVVNFCPKSPCPSSFLMSKEAFAAISRLPNARLNVEYIEI 127
           RCLSGRN PCKTDIIEVQVVNFCPKSPCPSSFLMSKEAF+AISR PNA+LNVEYIEI
Sbjct: 73  RCLSGRNRPCKTDIIEVQVVNFCPKSPCPSSFLMSKEAFSAISRFPNAKLNVEYIEI 129

[Close]
BLAST of Carg03920 vs. NCBI nr
Match: XP_023545437.1 (EG45-like domain containing protein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 229.9 bits (585), Expect = 4.6e-57
Identity = 107/125 (85.60%), Postives = 114/125 (91.20%), Query Frame = 0 

Query: 4   LVVVFF--FTHISMARGDIGTATAYGPPYLPTLCNGNRVDQFPPGNLFVAVNEGLWDNGA 63
           + ++FF  F HIS AR DIGTA AYGPPYLPT CNGN +DQFPPGN FVAVNEGLWDNGA
Sbjct: 11  MALLFFLVFEHISTARADIGTAIAYGPPYLPTRCNGNNIDQFPPGNFFVAVNEGLWDNGA 70

Query: 64  ACGRRYRLRCLSGRNHPCKTDIIEVQVVNFCPKSPCPSSFLMSKEAFAAISRLPNARLNV 123
           ACGRRYRLRCLSGRNHPCKTDIIEVQVVNFCPKSPCPSSFLMSKEAF+AISRL +A+LNV
Sbjct: 71  ACGRRYRLRCLSGRNHPCKTDIIEVQVVNFCPKSPCPSSFLMSKEAFSAISRLSSAKLNV 130

Query: 124 EYIEI 127
           EYIEI
Sbjct: 131 EYIEI 135

[Close]
BLAST of Carg03920 vs. TAIR10
Match: AT2G18660.1 (plant natriuretic peptide A)

HSP 1 Score: 77.8 bits (190), Expect = 5.3e-15
Identity = 43/127 (33.86%), Postives = 63/127 (49.61%), Query Frame = 0 

Query: 3   VLVVVFFFTHISMARGDIGTATAYGPPYLPTLCNGNRVDQFPPGNLFVAVNEGLWDNGAA 62
           V+++VF      +A    G A  Y PPY  + C G + +      L V V   LW NG A
Sbjct: 10  VVMIVFAQILAPIAEAAQGKAVYYDPPYTRSACYGTQRE-----TLVVGVKNNLWQNGRA 69

Query: 63  CGRRYRLRCLSGR---NHPCKTDIIEVQVVNFCPKSPCPSSFLMSKEAFAAISRLPNARL 122
           CGRRYR+RC+      +  C    ++V+VV+FC + PC     +S++AF  I+      +
Sbjct: 70  CGRRYRVRCIGATYNFDRACTGRTVDVKVVDFC-REPCNGDLNLSRDAFRVIANTDAGNI 129

Query: 123 NVEYIEI 127
            V Y  I
Sbjct: 130 RVVYTPI 130

[Close]
BLAST of Carg03920 vs. TAIR10
Match: AT4G30380.1 (Barwin-related endoglucanase)

HSP 1 Score: 68.9 bits (167), Expect = 2.5e-12
Identity = 40/122 (32.79%), Postives = 62/122 (50.82%), Query Frame = 0 

Query: 5   VVVFFFTHISMARGDIGTATAYGPPYLPTLCNGNRVDQFPPGNLFVAVNEGLWDNGAACG 64
           V+VF F+      G     T+Y P Y  T            G +  A ++ LWDNG  CG
Sbjct: 11  VLVFLFSFSYATPGIATFYTSYTPCYRGT----------QEGVMIAAASDTLWDNGRVCG 70

Query: 65  RRYRLRCLSGRN---HPCKTDIIEVQVVNFCPKSPCPSSFLMSKEAFAAISRLPNARLNV 124
           + + ++C   RN   HPC    ++V++V+ CP S C S+  +S+EAFA I+      +N+
Sbjct: 71  KMFTVKCSGPRNAVPHPCTGKSVKVKIVDHCP-SGCASTLDLSREAFAQIANPVAGIINI 121

[Close]
BLAST of Carg03920 vs. Swiss-Prot
Match: sp|Q9ZP41|EGC_CITJA (EG45-like domain containing protein OS=Citrus jambhiri OX=64884 GN=CjBAp12 PE=1 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 7.9e-16
Identity = 39/114 (34.21%), Postives = 66/114 (57.89%), Query Frame = 0 

Query: 14  SMARGDIGTATAYGPPYLPTLCNGNRVDQFPPGNLFVAVNEGLWDNGAACGRRYRLRCLS 73
           S A    GTAT Y PPY+P+ CNG + D    G +  A +  +W+NGA C + +R++C  
Sbjct: 20  SAAYASEGTATFYTPPYVPSACNGYKND----GVMIAAASYAIWNNGAVCNKSFRVKCTG 79

Query: 74  GRN----HPCKTDIIEVQVVNFCPKSPCPSSFLMSKEAFAAISRLPNARLNVEY 124
             N    HPC+   + V++V+ CP + C ++  +S+EAF+ I+     ++ +E+
Sbjct: 80  ATNQGTPHPCRGGSVLVKIVDLCP-AGCQATIDLSQEAFSQIANPDAGKIKIEF 128

[Close]
BLAST of Carg03920 vs. Swiss-Prot
Match: sp|Q9ZV52|EGC2_ARATH (EG45-like domain containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=EGC2 PE=2 SV=2)

HSP 1 Score: 77.8 bits (190), Expect = 9.6e-14
Identity = 43/127 (33.86%), Postives = 63/127 (49.61%), Query Frame = 0 

Query: 3   VLVVVFFFTHISMARGDIGTATAYGPPYLPTLCNGNRVDQFPPGNLFVAVNEGLWDNGAA 62
           V+++VF      +A    G A  Y PPY  + C G + +      L V V   LW NG A
Sbjct: 10  VVMIVFAQILAPIAEAAQGKAVYYDPPYTRSACYGTQRE-----TLVVGVKNNLWQNGRA 69

Query: 63  CGRRYRLRCLSGR---NHPCKTDIIEVQVVNFCPKSPCPSSFLMSKEAFAAISRLPNARL 122
           CGRRYR+RC+      +  C    ++V+VV+FC + PC     +S++AF  I+      +
Sbjct: 70  CGRRYRVRCIGATYNFDRACTGRTVDVKVVDFC-REPCNGDLNLSRDAFRVIANTDAGNI 129

Query: 123 NVEYIEI 127
            V Y  I
Sbjct: 130 RVVYTPI 130

[Close]
BLAST of Carg03920 vs. Swiss-Prot
Match: sp|Q9M0C2|EGC1_ARATH (Putative EG45-like domain containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=EGC1 PE=3 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 4.5e-11
Identity = 40/122 (32.79%), Postives = 62/122 (50.82%), Query Frame = 0 

Query: 5   VVVFFFTHISMARGDIGTATAYGPPYLPTLCNGNRVDQFPPGNLFVAVNEGLWDNGAACG 64
           V+VF F+      G     T+Y P Y  T            G +  A ++ LWDNG  CG
Sbjct: 11  VLVFLFSFSYATPGIATFYTSYTPCYRGT----------QEGVMIAAASDTLWDNGRVCG 70

Query: 65  RRYRLRCLSGRN---HPCKTDIIEVQVVNFCPKSPCPSSFLMSKEAFAAISRLPNARLNV 124
           + + ++C   RN   HPC    ++V++V+ CP S C S+  +S+EAFA I+      +N+
Sbjct: 71  KMFTVKCSGPRNAVPHPCTGKSVKVKIVDHCP-SGCASTLDLSREAFAQIANPVAGIINI 121

[Close]
BLAST of Carg03920 vs. TrEMBL
Match: tr|A0A1S3BC30|A0A1S3BC30_CUCME (EG45-like domain containing protein OS=Cucumis melo OX=3656 GN=LOC103488301 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 3.1e-57
Identity = 104/117 (88.89%), Postives = 109/117 (93.16%), Query Frame = 0 

Query: 10  FTHISMARGDIGTATAYGPPYLPTLCNGNRVDQFPPGNLFVAVNEGLWDNGAACGRRYRL 69
           F H+SMA  DIGTAT YGPPYLPT CNGN ++QFPPGNLFVAVNEGLWDNGAACGRRYRL
Sbjct: 13  FKHVSMALADIGTATPYGPPYLPTQCNGNSIEQFPPGNLFVAVNEGLWDNGAACGRRYRL 72

Query: 70  RCLSGRNHPCKTDIIEVQVVNFCPKSPCPSSFLMSKEAFAAISRLPNARLNVEYIEI 127
           RCLSGRN PCKTDIIEVQVVNFCPKSPCPSSFLMSKEAF+AISR PNA+LNVEYIEI
Sbjct: 73  RCLSGRNRPCKTDIIEVQVVNFCPKSPCPSSFLMSKEAFSAISRFPNAKLNVEYIEI 129

[Close]
BLAST of Carg03920 vs. TrEMBL
Match: tr|A0A0A0LSH0|A0A0A0LSH0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G381670 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 9.2e-54
Identity = 100/112 (89.29%), Postives = 104/112 (92.86%), Query Frame = 0 

Query: 15  MARGDIGTATAYGPPYLPTLCNGNRVDQFPPGNLFVAVNEGLWDNGAACGRRYRLRCLSG 74
           MA  DIGTA++YGPPYLPT CNGN V+QFPPGNLFVAVNEGLWDNGAACGRRYRLRCLSG
Sbjct: 1   MALADIGTASSYGPPYLPTQCNGNSVEQFPPGNLFVAVNEGLWDNGAACGRRYRLRCLSG 60

Query: 75  RNHPCKTDIIEVQVVNFCPKSPCPSSFLMSKEAFAAISRLPNARLNVEYIEI 127
           RN PCKTDIIEVQVVNFCPKSPCPSSFLMSKEAF AISR P A+LNVEYIEI
Sbjct: 61  RNRPCKTDIIEVQVVNFCPKSPCPSSFLMSKEAFFAISRFPTAKLNVEYIEI 112

[Close]
BLAST of Carg03920 vs. TrEMBL
Match: tr|A0A068UZ18|A0A068UZ18_COFCA (Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00038453001 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 4.6e-45
Identity = 84/128 (65.62%), Postives = 106/128 (82.81%), Query Frame = 0 

Query: 1   MAVLVVVFFFTHISMARGDIGTATAYGPPYLPTLCNGNRVDQFPPGNLFVAVNEGLWDNG 60
           +A L++  F + IS+ RGDIGTAT+Y PPY+PT CNGNR DQFP GNLFVAV+EGLWDNG
Sbjct: 6   VATLLISLFCSEISLVRGDIGTATSYSPPYIPTRCNGNRPDQFPAGNLFVAVSEGLWDNG 65

Query: 61  AACGRRYRLRCLSGRNHPCKT--DIIEVQVVNFCPKSPCPSSFLMSKEAFAAISRLPNAR 120
           AACGRRYRLRCLSG N PCK     I+V+VV+FCP+ PCPS+ L+S +AFAAI+  P+A+
Sbjct: 66  AACGRRYRLRCLSGNNKPCKNVGTTIDVRVVDFCPRRPCPSTILLSTDAFAAIAHSPHAK 125

Query: 121 LNVEYIEI 127
           +N+EYI++
Sbjct: 126 INIEYIQV 133

[Close]
BLAST of Carg03920 vs. TrEMBL
Match: tr|A0A2P4HUQ0|A0A2P4HUQ0_QUESU (Eg45-like domain containing protein OS=Quercus suber OX=58331 GN=CFP56_03630 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 7.8e-45
Identity = 84/124 (67.74%), Postives = 101/124 (81.45%), Query Frame = 0 

Query: 3   VLVVVFFFTHISMARGDIGTATAYGPPYLPTLCNGNRVDQFPPGNLFVAVNEGLWDNGAA 62
           V++ +   + I +  GDI TA +YGPPY+PT CNGNR DQFPPGNLFVAV+EGLWDNGAA
Sbjct: 5   VILAIVVLSLIGLVLGDICTAASYGPPYIPTRCNGNRQDQFPPGNLFVAVSEGLWDNGAA 64

Query: 63  CGRRYRLRCLSGRNHPCKTDIIEVQVVNFCPKSPCPSSFLMSKEAFAAISRLPNARLNVE 122
           CGRRYRLRCLSG N PCK   I+V+VV++CP+SPCPS+ LMS  AFAAIS  P A++NVE
Sbjct: 65  CGRRYRLRCLSGNNKPCKDGTIDVKVVDYCPRSPCPSTLLMSTNAFAAISNSPTAKINVE 124

Query: 123 YIEI 127
           YI+I
Sbjct: 125 YIQI 128

[Close]
BLAST of Carg03920 vs. TrEMBL
Match: tr|A0A0S3RCE0|A0A0S3RCE0_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.02G082000 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 7.8e-45
Identity = 80/119 (67.23%), Postives = 97/119 (81.51%), Query Frame = 0 

Query: 8   FFFTHISMARGDIGTATAYGPPYLPTLCNGNRVDQFPPGNLFVAVNEGLWDNGAACGRRY 67
           FF   +S+  GD+GTA +YGPPY+PT C GNR  QFPPGNLF AVNEGLWDNGAACGRRY
Sbjct: 13  FFLRRVSLVIGDVGTAASYGPPYIPTACGGNRAGQFPPGNLFAAVNEGLWDNGAACGRRY 72

Query: 68  RLRCLSGRNHPCKTDIIEVQVVNFCPKSPCPSSFLMSKEAFAAISRLPNARLNVEYIEI 127
           R+RC+SG N PCK   I+V+VV+ CP SPCP+S LMS +AFAAISR P+A++N+EY +I
Sbjct: 73  RIRCVSGNNRPCKGGSIDVKVVDSCPGSPCPNSLLMSNDAFAAISRFPHAKINIEYTQI 131

The following BLAST results are available for this feature:
BLAST of Carg03920 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022951412.11.7e-6798.41EG45-like domain containing protein [Cucurbita moschata][more]
XP_023537855.14.2e-6697.56EG45-like domain containing protein [Cucurbita pepo subsp. pepo][more]
XP_023002547.17.4e-6393.50EG45-like domain containing protein [Cucurbita maxima][more]
XP_008445199.14.6e-5788.89PREDICTED: EG45-like domain containing protein [Cucumis melo][more]
XP_023545437.14.6e-5785.60EG45-like domain containing protein [Cucurbita pepo subsp. pepo][more]
BLAST of Carg03920 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G18660.15.3e-1533.86plant natriuretic peptide A[more]
AT4G30380.12.5e-1232.79Barwin-related endoglucanase[more]
BLAST of Carg03920 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9ZP41|EGC_CITJA7.9e-1634.21EG45-like domain containing protein OS=Citrus jambhiri OX=64884 GN=CjBAp12 PE=1 ... [more]
sp|Q9ZV52|EGC2_ARATH9.6e-1433.86EG45-like domain containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=EGC2 PE... [more]
sp|Q9M0C2|EGC1_ARATH4.5e-1132.79Putative EG45-like domain containing protein 1 OS=Arabidopsis thaliana OX=3702 G... [more]
BLAST of Carg03920 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BC30|A0A1S3BC30_CUCME3.1e-5788.89EG45-like domain containing protein OS=Cucumis melo OX=3656 GN=LOC103488301 PE=4... [more]
tr|A0A0A0LSH0|A0A0A0LSH0_CUCSA9.2e-5489.29Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G381670 PE=4 SV=1[more]
tr|A0A068UZ18|A0A068UZ18_COFCA4.6e-4565.63Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00038453001 PE=4 ... [more]
tr|A0A2P4HUQ0|A0A2P4HUQ0_QUESU7.8e-4567.74Eg45-like domain containing protein OS=Quercus suber OX=58331 GN=CFP56_03630 PE=... [more]
tr|A0A0S3RCE0|A0A0S3RCE0_PHAAN7.8e-4567.23Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.02G... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR009009RlpA-like_DPBB
IPR036908RlpA-like_sf
IPR007112Expansin/allergen_DPBB_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg03920-RACarg03920-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007112Expansin/pollen allergen, DPBB domainSMARTSM00837dpbb_1coord: 50..123
e-value: 0.006
score: 20.3
IPR007112Expansin/pollen allergen, DPBB domainPROSITEPS50842EXPANSIN_EG45coord: 21..126
score: 12.403
IPR036908RlpA-like domain superfamilyGENE3DG3DSA:2.40.40.10coord: 19..126
e-value: 7.4E-21
score: 76.6
IPR036908RlpA-like domain superfamilySUPERFAMILYSSF50685Barwin-like endoglucanasescoord: 7..123
IPR009009RlpA-like protein, double-psi beta-barrel domainPFAMPF03330DPBB_1coord: 51..123
e-value: 2.3E-9
score: 37.3
NoneNo IPR availablePANTHERPTHR22595:SF73SUBFAMILY NOT NAMEDcoord: 2..126
NoneNo IPR availablePANTHERPTHR22595CHITINASE-RELATEDcoord: 2..126

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg03920Cla022317Watermelon (97103) v1carwmB0978
Carg03920Csa2G381670Cucumber (Chinese Long) v2carcuB0987
Carg03920MELO3C011252Melon (DHL92) v3.5.1carmeB0955
Carg03920ClCG08G013250Watermelon (Charleston Gray)carwcgB0958
Carg03920CSPI02G23430Wild cucumber (PI 183967)carcpiB1010
Carg03920Cucsa.162380Cucumber (Gy14) v1carcgyB1091
Carg03920CmaCh05G003880Cucurbita maxima (Rimu)carcmaB1357
Carg03920CmaCh12G003320Cucurbita maxima (Rimu)carcmaB1349
Carg03920CmoCh05G003870Cucurbita moschata (Rifu)carcmoB1319
Carg03920CmoCh12G002810Cucurbita moschata (Rifu)carcmoB1310
Carg03920Lsi08G011950Bottle gourd (USVL1VR-Ls)carlsiB898
Carg03920Cp4.1LG11g03260Cucurbita pepo (Zucchini)carcpeB1352
Carg03920Cp4.1LG07g02880Cucurbita pepo (Zucchini)carcpeB1368
Carg03920CsGy2G023190Cucumber (Gy14) v2carcgybB0960
Carg03920MELO3C011252.2Melon (DHL92) v3.6.1carmedB0961
Carg03920CsaV3_2G031980Cucumber (Chinese Long) v3carcucB1015
Carg03920Cla97C08G156640Watermelon (97103) v2carwmbB1034
Carg03920Bhi04G000794Wax gourdcarwgoB1145
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg03920Carg09330Silver-seed gourdcarcarB168
The following block(s) are covering this gene:
GeneOrganismBlock
Carg03920Silver-seed gourdcarcarB239
Carg03920Silver-seed gourdcarcarB529
Carg03920Silver-seed gourdcarcarB558
Carg03920Silver-seed gourdcarcarB572
Carg03920Cucumber (Gy14) v2carcgybB0961
Carg03920Cucumber (Gy14) v2carcgybB0965
Carg03920Cucumber (Gy14) v1carcgyB1096
Carg03920Cucurbita maxima (Rimu)carcmaB1347
Carg03920Cucurbita maxima (Rimu)carcmaB1350
Carg03920Cucurbita maxima (Rimu)carcmaB1353
Carg03920Cucurbita maxima (Rimu)carcmaB1359
Carg03920Cucurbita moschata (Rifu)carcmoB1308
Carg03920Cucurbita moschata (Rifu)carcmoB1311
Carg03920Cucurbita moschata (Rifu)carcmoB1313
Carg03920Cucurbita moschata (Rifu)carcmoB1315
Carg03920Cucurbita pepo (Zucchini)carcpeB1354
Carg03920Cucurbita pepo (Zucchini)carcpeB1356
Carg03920Cucurbita pepo (Zucchini)carcpeB1363
Carg03920Cucurbita pepo (Zucchini)carcpeB1366
Carg03920Wild cucumber (PI 183967)carcpiB1011
Carg03920Wild cucumber (PI 183967)carcpiB1016
Carg03920Cucumber (Chinese Long) v2carcuB0988
Carg03920Cucumber (Chinese Long) v2carcuB0993
Carg03920Cucumber (Chinese Long) v3carcucB1016
Carg03920Cucumber (Chinese Long) v3carcucB1021
Carg03920Bottle gourd (USVL1VR-Ls)carlsiB895
Carg03920Melon (DHL92) v3.5.1carmeB0957
Carg03920Melon (DHL92) v3.6.1carmedB0963
Carg03920Watermelon (Charleston Gray)carwcgB0957
Carg03920Watermelon (Charleston Gray)carwcgB0951
Carg03920Watermelon (Charleston Gray)carwcgB0955
Carg03920Watermelon (97103) v1carwmB0980
Carg03920Watermelon (97103) v1carwmB0982
Carg03920Watermelon (97103) v2carwmbB1031
Carg03920Watermelon (97103) v2carwmbB1033
Carg03920Wax gourdcarwgoB1151