Carg03889 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGTTCTTCAATCTATTCATTGTTTTATGGCTTCACCCCTTTTTGATTTTCAAATGTTTCTGTAATGCCCTAGAGAAATCGAGGGTTTCTGTTCTTTGAACGCCTCTTGCGGGTTTAATCTCTCCTCCGATTGCGTTTTCGTCTCTATTCTTGCGATTTCTCCGATTATCGATTGAAACTATTGGGGATTTTTACTTGTTTCTGCATTTTGAGCTTTGGTTTATGATTGTTCTTGAGATTTTTCATCTGGATATTGTCCATTTCAGTTGATTATTGATTCAAACTATTGGGGATTTTTAATGTGAAGTTGATCGAGACGAATGTTTCTGCATTTTGAGCTTTGGACTATGATTGTTCTTGAGACTTTTCATCTGGATATTGTCCATTTCAATCGATTATTGATTCAAACTATTGGGGATTTCTAATGTGAAGTTGATCGAGGCGAATGTTTCTACATTTCGCGCTTTGGATTATGATTGTTCTTGAGATTTTTCATGAGAACGTTTCTTTCGCTATTGGATCTCATTCTGCGTTTATATTTAGTTCCTAATCCCTAAAATGTTTCAATCTGTTCGTTTTCTTGTACTTCTGATTACATGAACTGTGTTCTTACCAATTAGTAGATACTAATAATGTTTGTATTTACATTGGTTTCTGCTGATTCTGGTGGATTTCTGAAACTATTTGTATTTGTCAATGAACACAAATGCCATTGATTCAGAACAAGAAGCTATGATTTTGCAGGGGTTGGTTTTTCAGAGTGGCAATTCGAAATAATGCTGAGAAAAAGAACAAGGTCGGTTCAGAACGATCAATATCGAATGAATCAGCTGAATGTTCCTTGTTCTAGTTCTATTTTCAAAAGATGTCACATGTTTACTGGCTTATCTCCTAAAGGTTTAGATTATGATTCAGCTAAAAGTCCCACTTCTCCTCTTGATTTTTGGGTATTCCCTCTTAAATCTCCTAGATCATTATCCAATGAGAGCCATAGAAGGAACTGGGATTGTAGTAAAGTAGGGCTTAGCATTGTAGATTCCTTAAACGACGATGACAATAAACTATTTGGGAAAGTTCTTCGATCATCGGATAGTAAGACCGTTCTTTTCAGACCTCGAATTGTCGCTAAGAACAACTTGGATCGTCCTTCAAGAGCTATTCTTTTTCAAGGACCTAAATCCTTGCCTAAAAACTATGTAACTTTCCCTTTATCAAAGACCAAATCTCCCATTGATCAGGGAAACTCTAATGTGATTTTTGAAATTGGAGAAACCCCGTTAGAATCCGAGCGTTTCAGGAACTACTCTCGATCGTTTGATTCCTATAGGTTGTTTGCTCCTCGTCCTGGTTTAACTGGTAACAGCCTTGGTAGTAGTTCTACTACTGAGAGCATTGATTCTCCATGGTTAGCTGAAGAATCTAGAGATTCAAATAAATGTCCCCTTGCGAAACCGTGTTCGAGTTCTTTGGGCGTATCTGTTGACAATGGATCTAAGATGCCTCTCTCAGCAAGTGAGATTGAGTTGTCTGAGGATTATACTTGTGTGATCTCACATGGTCCGAACCCGAAAACTACTCATATTTACGGTGACTGCATTTTAGAGAGTCGTAATTATTTGAGCTCTTCTTGTGAAAATGAAATGAAGGAGGGATTGTTCCATCCTCTTAAGAACATGGATATGGCCACTTCATATACCTTAAGTGACTTCTTAAGCTTCTGCCATTCTTGTCATGAGAAACTGGAAGAGGGAAAAGACATCTACATTTACAGGTTTGCCACAAGAAAAATCGACATTGTTCTTGTTTCTTGCATTCGTTTTTACGAGAATAACGAACTCGTGACCGTTGCAGGGGGGAGAAAGCTTTCTGCAGCCTTACGTGCCGTTCTCAGGAGATATCAATGGATGAAGAGCTCGAGAAATCCATCGAAAAAACCTCGGTGAGTTCTCCCAAGTCCAATGCTGACCGTGATGAGGATCTCTTCGGAACGAGCGTTGGTGGCTTTGCATAAGCAGTCGCCGTGTACGATGCCCGTTGAAGTTAACGGACACCCTTTTGGTCATCTGTTTGAAAAGAGCTGTTTTTATGTCCATTGGTGGCGGCCATGGATGATCATTTTTGTAAAATCATGGTGTCTACTGTCTTTGTTGCTTCACCATTTTTACATAAACCTGACTGTGAATGCCTTGTGAGCCTGTTTTTTGTGGCTCCTATTTTTGAGTTTCTTTCTGGCTTCATTTATGATTATGGCCAGAAAATAAGATGACGAATGGACCCGAAACTTTAGGAATTTATACTTTATCTTATCTCTAGTAGCCTCGTGAATTTTAATTTTTTTTTTGAATGGGTAAGAATTTATTAGAAGCATAAATGTAGATTCCACATCGGTTGGAGAGTAGAACGAAACATTTGTTATAAGGGCGTAAAAATCTCTCTTTAGTAGACACGTTTTAGGGAA TGTTCTTCAATCTATTCATTGTTTTATGGCTTCACCCCTTTTTGATTTTCAAATGTTTCTGTAATGCCCTAGAGAAATCGAGGGTTTCTGTTCTTTGAACGCCTCTTGCGGGTTTAATCTCTCCTCCGATTGCGTTTTCGTCTCTATTCTTGCGATTTCTCCGATTATCGATTGAAACTATTGGGGATTTTTACTTGTTTCTGCATTTTGAGCTTTGGTTTATGATTGTTCTTGAGATTTTTCATCTGGATATTGTCCATTTCAGTTGATTATTGATTCAAACTATTGGGGATTTTTAATGTGAAGTTGATCGAGACGAATGTTTCTGCATTTTGAGCTTTGGACTATGATTGTTCTTGAGACTTTTCATCTGGATATTGTCCATTTCAATCGATTATTGATTCAAACTATTGGGGATTTCTAATGTGAAGTTGATCGAGGCGAATGTTTCTACATTTCGCGCTTTGGATTATGATTGTTCTTGAGATTTTTCATGAGAACGTTTCTTTCGCTATTGGATCTCATTCTGCGTTTATATTTAGTTCCTAATCCCTAAAATGTTTCAATCTGTTCGTTTTCTTGTACTTCTGATTACATGAACTGTGTTCTTACCAATTAGTAGATACTAATAATGTTTGTATTTACATTGGTTTCTGCTGATTCTGGTGGATTTCTGAAACTATTTGTATTTGTCAATGAACACAAATGCCATTGATTCAGAACAAGAAGCTATGATTTTGCAGGGGTTGGTTTTTCAGAGTGGCAATTCGAAATAATGCTGAGAAAAAGAACAAGGTCGGTTCAGAACGATCAATATCGAATGAATCAGCTGAATGTTCCTTGTTCTAGTTCTATTTTCAAAAGATGTCACATGTTTACTGGCTTATCTCCTAAAGGTTTAGATTATGATTCAGCTAAAAGTCCCACTTCTCCTCTTGATTTTTGGGTATTCCCTCTTAAATCTCCTAGATCATTATCCAATGAGAGCCATAGAAGGAACTGGGATTGTAGTAAAGTAGGGCTTAGCATTGTAGATTCCTTAAACGACGATGACAATAAACTATTTGGGAAAGTTCTTCGATCATCGGATAGTAAGACCGTTCTTTTCAGACCTCGAATTGTCGCTAAGAACAACTTGGATCGTCCTTCAAGAGCTATTCTTTTTCAAGGACCTAAATCCTTGCCTAAAAACTATGTAACTTTCCCTTTATCAAAGACCAAATCTCCCATTGATCAGGGAAACTCTAATGTGATTTTTGAAATTGGAGAAACCCCGTTAGAATCCGAGCGTTTCAGGAACTACTCTCGATCGTTTGATTCCTATAGGTTGTTTGCTCCTCGTCCTGGTTTAACTGGTAACAGCCTTGGTAGTAGTTCTACTACTGAGAGCATTGATTCTCCATGGTTAGCTGAAGAATCTAGAGATTCAAATAAATGTCCCCTTGCGAAACCGTGTTCGAGTTCTTTGGGCGTATCTGTTGACAATGGATCTAAGATGCCTCTCTCAGCAAGTGAGATTGAGTTGTCTGAGGATTATACTTGTGTGATCTCACATGGTCCGAACCCGAAAACTACTCATATTTACGGTGACTGCATTTTAGAGAGTCGTAATTATTTGAGCTCTTCTTGTGAAAATGAAATGAAGGAGGGATTGTTCCATCCTCTTAAGAACATGGATATGGCCACTTCATATACCTTAAGTGACTTCTTAAGCTTCTGCCATTCTTGTCATGAGAAACTGGAAGAGGGAAAAGACATCTACATTTACAGGGGGGAGAAAGCTTTCTGCAGCCTTACGTGCCGTTCTCAGGAGATATCAATGGATGAAGAGCTCGAGAAATCCATCGAAAAAACCTCGGTGAGTTCTCCCAAGTCCAATGCTGACCGTGATGAGGATCTCTTCGGAACGAGCGTTGGTGGCTTTGCATAAGCAGTCGCCGTGTACGATGCCCGTTGAAGTTAACGGACACCCTTTTGGTCATCTGTTTGAAAAGAGCTGTTTTTATGTCCATTGGTGGCGGCCATGGATGATCATTTTTGTAAAATCATGGTGTCTACTGTCTTTGTTGCTTCACCATTTTTACATAAACCTGACTGTGAATGCCTTGTGAGCCTGTTTTTTGTGGCTCCTATTTTTGAGTTTCTTTCTGGCTTCATTTATGATTATGGCCAGAAAATAAGATGACGAATGGACCCGAAACTTTAGGAATTTATACTTTATCTTATCTCTAGTAGCCTCGTGAATTTTAATTTTTTTTTTGAATGGGTAAGAATTTATTAGAAGCATAAATGTAGATTCCACATCGGTTGGAGAGTAGAACGAAACATTTGTTATAAGGGCGTAAAAATCTCTCTTTAGTAGACACGTTTTAGGGAA ATGCTGAGAAAAAGAACAAGGTCGGTTCAGAACGATCAATATCGAATGAATCAGCTGAATGTTCCTTGTTCTAGTTCTATTTTCAAAAGATGTCACATGTTTACTGGCTTATCTCCTAAAGGTTTAGATTATGATTCAGCTAAAAGTCCCACTTCTCCTCTTGATTTTTGGGTATTCCCTCTTAAATCTCCTAGATCATTATCCAATGAGAGCCATAGAAGGAACTGGGATTGTAGTAAAGTAGGGCTTAGCATTGTAGATTCCTTAAACGACGATGACAATAAACTATTTGGGAAAGTTCTTCGATCATCGGATAGTAAGACCGTTCTTTTCAGACCTCGAATTGTCGCTAAGAACAACTTGGATCGTCCTTCAAGAGCTATTCTTTTTCAAGGACCTAAATCCTTGCCTAAAAACTATGTAACTTTCCCTTTATCAAAGACCAAATCTCCCATTGATCAGGGAAACTCTAATGTGATTTTTGAAATTGGAGAAACCCCGTTAGAATCCGAGCGTTTCAGGAACTACTCTCGATCGTTTGATTCCTATAGGTTGTTTGCTCCTCGTCCTGGTTTAACTGGTAACAGCCTTGGTAGTAGTTCTACTACTGAGAGCATTGATTCTCCATGGTTAGCTGAAGAATCTAGAGATTCAAATAAATGTCCCCTTGCGAAACCGTGTTCGAGTTCTTTGGGCGTATCTGTTGACAATGGATCTAAGATGCCTCTCTCAGCAAGTGAGATTGAGTTGTCTGAGGATTATACTTGTGTGATCTCACATGGTCCGAACCCGAAAACTACTCATATTTACGGTGACTGCATTTTAGAGAGTCGTAATTATTTGAGCTCTTCTTGTGAAAATGAAATGAAGGAGGGATTGTTCCATCCTCTTAAGAACATGGATATGGCCACTTCATATACCTTAAGTGACTTCTTAAGCTTCTGCCATTCTTGTCATGAGAAACTGGAAGAGGGAAAAGACATCTACATTTACAGGGGGGAGAAAGCTTTCTGCAGCCTTACGTGCCGTTCTCAGGAGATATCAATGGATGAAGAGCTCGAGAAATCCATCGAAAAAACCTCGGTGAGTTCTCCCAAGTCCAATGCTGACCGTGATGAGGATCTCTTCGGAACGAGCGTTGGTGGCTTTGCATAA MLRKRTRSVQNDQYRMNQLNVPCSSSIFKRCHMFTGLSPKGLDYDSAKSPTSPLDFWVFPLKSPRSLSNESHRRNWDCSKVGLSIVDSLNDDDNKLFGKVLRSSDSKTVLFRPRIVAKNNLDRPSRAILFQGPKSLPKNYVTFPLSKTKSPIDQGNSNVIFEIGETPLESERFRNYSRSFDSYRLFAPRPGLTGNSLGSSSTTESIDSPWLAEESRDSNKCPLAKPCSSSLGVSVDNGSKMPLSASEIELSEDYTCVISHGPNPKTTHIYGDCILESRNYLSSSCENEMKEGLFHPLKNMDMATSYTLSDFLSFCHSCHEKLEEGKDIYIYRGEKAFCSLTCRSQEISMDEELEKSIEKTSVSSPKSNADRDEDLFGTSVGGFA
BLAST of Carg03889 vs. NCBI nr
Match: XP_022951990.1 (uncharacterized protein LOC111454706 [Cucurbita moschata]) HSP 1 Score: 759.6 bits (1960), Expect = 5.1e-216 Identity = 378/384 (98.44%), Postives = 378/384 (98.44%), Query Frame = 0
BLAST of Carg03889 vs. NCBI nr
Match: XP_023538528.1 (uncharacterized protein LOC111799279 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 755.7 bits (1950), Expect = 7.4e-215 Identity = 376/384 (97.92%), Postives = 377/384 (98.18%), Query Frame = 0
BLAST of Carg03889 vs. NCBI nr
Match: XP_023522742.1 (uncharacterized protein LOC111786744 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 749.6 bits (1934), Expect = 5.3e-213 Identity = 374/384 (97.40%), Postives = 375/384 (97.66%), Query Frame = 0
BLAST of Carg03889 vs. NCBI nr
Match: XP_023002380.1 (uncharacterized protein LOC111496237 [Cucurbita maxima]) HSP 1 Score: 731.9 bits (1888), Expect = 1.1e-207 Identity = 366/384 (95.31%), Postives = 370/384 (96.35%), Query Frame = 0
BLAST of Carg03889 vs. NCBI nr
Match: XP_022131381.1 (uncharacterized protein LOC111004616 isoform X2 [Momordica charantia]) HSP 1 Score: 588.6 bits (1516), Expect = 1.6e-164 Identity = 312/401 (77.81%), Postives = 341/401 (85.04%), Query Frame = 0
BLAST of Carg03889 vs. TAIR10
Match: AT5G11460.1 (Protein of unknown function (DUF581)) HSP 1 Score: 166.4 bits (420), Expect = 3.5e-41 Identity = 126/349 (36.10%), Postives = 176/349 (50.43%), Query Frame = 0
BLAST of Carg03889 vs. TAIR10
Match: AT2G25690.1 (Protein of unknown function (DUF581)) HSP 1 Score: 123.2 bits (308), Expect = 3.4e-28 Identity = 105/323 (32.51%), Postives = 143/323 (44.27%), Query Frame = 0
BLAST of Carg03889 vs. TAIR10
Match: AT3G22550.1 (Protein of unknown function (DUF581)) HSP 1 Score: 96.3 bits (238), Expect = 4.4e-20 Identity = 77/220 (35.00%), Postives = 103/220 (46.82%), Query Frame = 0
BLAST of Carg03889 vs. TAIR10
Match: AT3G63210.1 (Protein of unknown function (DUF581)) HSP 1 Score: 88.6 bits (218), Expect = 9.2e-18 Identity = 49/109 (44.95%), Postives = 63/109 (57.80%), Query Frame = 0
BLAST of Carg03889 vs. TAIR10
Match: AT1G79970.1 (unknown protein) HSP 1 Score: 80.9 bits (198), Expect = 1.9e-15 Identity = 72/239 (30.13%), Postives = 96/239 (40.17%), Query Frame = 0
BLAST of Carg03889 vs. Swiss-Prot
Match: sp|Q8LGS1|MARD1_ARATH (Protein MARD1 OS=Arabidopsis thaliana OX=3702 GN=MARD1 PE=2 SV=2) HSP 1 Score: 88.6 bits (218), Expect = 1.7e-16 Identity = 49/109 (44.95%), Postives = 63/109 (57.80%), Query Frame = 0
BLAST of Carg03889 vs. TrEMBL
Match: tr|A0A1S3BBG4|A0A1S3BBG4_CUCME (uncharacterized protein LOC103488251 OS=Cucumis melo OX=3656 GN=LOC103488251 PE=4 SV=1) HSP 1 Score: 567.8 bits (1462), Expect = 1.9e-158 Identity = 299/400 (74.75%), Postives = 331/400 (82.75%), Query Frame = 0
BLAST of Carg03889 vs. TrEMBL
Match: tr|A0A0A0LPE0|A0A0A0LPE0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G379200 PE=4 SV=1) HSP 1 Score: 563.1 bits (1450), Expect = 4.7e-157 Identity = 296/400 (74.00%), Postives = 331/400 (82.75%), Query Frame = 0
BLAST of Carg03889 vs. TrEMBL
Match: tr|B9H9E3|B9H9E3_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_006G245200v3 PE=4 SV=2) HSP 1 Score: 317.8 bits (813), Expect = 3.4e-83 Identity = 209/413 (50.61%), Postives = 259/413 (62.71%), Query Frame = 0
BLAST of Carg03889 vs. TrEMBL
Match: tr|M5XS85|M5XS85_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G464800 PE=4 SV=1) HSP 1 Score: 310.1 bits (793), Expect = 7.1e-81 Identity = 197/400 (49.25%), Postives = 253/400 (63.25%), Query Frame = 0
BLAST of Carg03889 vs. TrEMBL
Match: tr|F6H3G9|F6H3G9_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_04s0008g04490 PE=4 SV=1) HSP 1 Score: 306.6 bits (784), Expect = 7.8e-80 Identity = 203/416 (48.80%), Postives = 251/416 (60.34%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|