Carg03835 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg03835
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	lachrymatory-factor synthase
Location	Cucurbita_argyrosperma_scaffold_011 : 318309 .. 318794 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGAAAACTCAGCAGCAAAATGGGAAGGCCGAGTTTCAGAGGCCTTACAAGGCGCTACCGCGGACCAGATATGGCCGATGCTAAAGGATTTCTTCAATTTGCACAAATGGTTTCCAACCCTAGCCAACTGCTACGGACTTTCAGGCACTAACGGCGAGGTCGGCTGCGTTCGATTTTGCTCCGGCTTCTCGATTCCATCCACCGACGGCTCCGATAGCGTGGTTAGCTGGTCCAAAGAACGGCTGGTGGCGGTGGACGACGAGCGCCGCCGCATACGCTACGAGATCGTGGATAGCAACATCGGATTTAAATCGTACGTGTCGACGATCGAAGTCGTTGAGGGAGGAGACGGCGGCGTGATTGAATGGAGCTTTGTGGTTGAGGCGGTGGAAGGATTGAAACTGGAAGATCTGGTGAAGAAGTTCGAAACGGGATTGAAATCCATGGCCAGACGAATGGAGGTTGCGGTACAAAAAAATTAA

mRNA sequence

ATGGCGGAAAACTCAGCAGCAAAATGGGAAGGCCGAGTTTCAGAGGCCTTACAAGGCGCTACCGCGGACCAGATATGGCCGATGCTAAAGGATTTCTTCAATTTGCACAAATGGTTTCCAACCCTAGCCAACTGCTACGGACTTTCAGGCACTAACGGCGAGGTCGGCTGCGTTCGATTTTGCTCCGGCTTCTCGATTCCATCCACCGACGGCTCCGATAGCGTGGTTAGCTGGTCCAAAGAACGGCTGGTGGCGGTGGACGACGAGCGCCGCCGCATACGCTACGAGATCGTGGATAGCAACATCGGATTTAAATCGTACGTGTCGACGATCGAAGTCGTTGAGGGAGGAGACGGCGGCGTGATTGAATGGAGCTTTGTGGTTGAGGCGGTGGAAGGATTGAAACTGGAAGATCTGGTGAAGAAGTTCGAAACGGGATTGAAATCCATGGCCAGACGAATGGAGGTTGCGGTACAAAAAAATTAA

Coding sequence (CDS)

ATGGCGGAAAACTCAGCAGCAAAATGGGAAGGCCGAGTTTCAGAGGCCTTACAAGGCGCTACCGCGGACCAGATATGGCCGATGCTAAAGGATTTCTTCAATTTGCACAAATGGTTTCCAACCCTAGCCAACTGCTACGGACTTTCAGGCACTAACGGCGAGGTCGGCTGCGTTCGATTTTGCTCCGGCTTCTCGATTCCATCCACCGACGGCTCCGATAGCGTGGTTAGCTGGTCCAAAGAACGGCTGGTGGCGGTGGACGACGAGCGCCGCCGCATACGCTACGAGATCGTGGATAGCAACATCGGATTTAAATCGTACGTGTCGACGATCGAAGTCGTTGAGGGAGGAGACGGCGGCGTGATTGAATGGAGCTTTGTGGTTGAGGCGGTGGAAGGATTGAAACTGGAAGATCTGGTGAAGAAGTTCGAAACGGGATTGAAATCCATGGCCAGACGAATGGAGGTTGCGGTACAAAAAAATTAA

Protein sequence

MAENSAAKWEGRVSEALQGATADQIWPMLKDFFNLHKWFPTLANCYGLSGTNGEVGCVRFCSGFSIPSTDGSDSVVSWSKERLVAVDDERRRIRYEIVDSNIGFKSYVSTIEVVEGGDGGVIEWSFVVEAVEGLKLEDLVKKFETGLKSMARRMEVAVQKN

Homology

[Close]

BLAST of Carg03835 vs. NCBI nr
Match: XP_022951556.1 (lachrymatory-factor synthase [Cucurbita moschata])

HSP 1 Score: 323.2 bits (827), Expect = 5.1e-85
Identity = 160/161 (99.38%), Postives = 160/161 (99.38%), Query Frame = 0


Query: 1   MAENSAAKWEGRVSEALQGATADQIWPMLKDFFNLHKWFPTLANCYGLSGTNGEVGCVRF 60
           MAENSAAKWEGRVSEALQGATADQIWPMLKDFFNLHKWFPTLANCYGLSGTNGEVGCVRF
Sbjct: 1   MAENSAAKWEGRVSEALQGATADQIWPMLKDFFNLHKWFPTLANCYGLSGTNGEVGCVRF 60

Query: 61  CSGFSIPSTDGSDSVVSWSKERLVAVDDERRRIRYEIVDSNIGFKSYVSTIEVVEGGDGG 120
           CSGFSIPSTDGS SVVSWSKERLVAVDDERRRIRYEIVDSNIGFKSYVSTIEVVEGGDGG
Sbjct: 61  CSGFSIPSTDGSGSVVSWSKERLVAVDDERRRIRYEIVDSNIGFKSYVSTIEVVEGGDGG 120

Query: 121 VIEWSFVVEAVEGLKLEDLVKKFETGLKSMARRMEVAVQKN 162
           VIEWSFVVEAVEGLKLEDLVKKFETGLKSMARRMEVAVQKN
Sbjct: 121 VIEWSFVVEAVEGLKLEDLVKKFETGLKSMARRMEVAVQKN 161

[Close]

BLAST of Carg03835 vs. NCBI nr
Match: XP_023537781.1 (lachrymatory-factor synthase [Cucurbita pepo subsp. pepo])

HSP 1 Score: 319.3 bits (817), Expect = 7.4e-84
Identity = 157/159 (98.74%), Postives = 158/159 (99.37%), Query Frame = 0


Query: 1   MAENSAAKWEGRVSEALQGATADQIWPMLKDFFNLHKWFPTLANCYGLSGTNGEVGCVRF 60
           MAEN+AAKWEGRVSEALQGATADQIWPMLKDFFN HKWFPTLANCYGLSGTNGEVGCVRF
Sbjct: 1   MAENTAAKWEGRVSEALQGATADQIWPMLKDFFNFHKWFPTLANCYGLSGTNGEVGCVRF 60

Query: 61  CSGFSIPSTDGSDSVVSWSKERLVAVDDERRRIRYEIVDSNIGFKSYVSTIEVVEGGDGG 120
           CSGFSIPSTDGSDSVVSWSKERLVAVDDERRRIRYEIVDSNIGFKSYVSTIEVVEGGDGG
Sbjct: 61  CSGFSIPSTDGSDSVVSWSKERLVAVDDERRRIRYEIVDSNIGFKSYVSTIEVVEGGDGG 120

Query: 121 VIEWSFVVEAVEGLKLEDLVKKFETGLKSMARRMEVAVQ 160
           VIEWSFVVEAVEGLKLEDLVKKFETGLKSMARRMEVAVQ
Sbjct: 121 VIEWSFVVEAVEGLKLEDLVKKFETGLKSMARRMEVAVQ 159

[Close]

BLAST of Carg03835 vs. NCBI nr
Match: XP_023002531.1 (lachrymatory-factor synthase-like [Cucurbita maxima])

HSP 1 Score: 314.7 bits (805), Expect = 1.8e-82
Identity = 154/161 (95.65%), Postives = 157/161 (97.52%), Query Frame = 0


Query: 1   MAENSAAKWEGRVSEALQGATADQIWPMLKDFFNLHKWFPTLANCYGLSGTNGEVGCVRF 60
           MAENSAAKWEGRVSE LQGATADQIWPMLKDFFN HKWFPTLANCYGLSGTNGEVGCVRF
Sbjct: 1   MAENSAAKWEGRVSETLQGATADQIWPMLKDFFNFHKWFPTLANCYGLSGTNGEVGCVRF 60

Query: 61  CSGFSIPSTDGSDSVVSWSKERLVAVDDERRRIRYEIVDSNIGFKSYVSTIEVVEGGDGG 120
           CSGFSIPSTDGSDSVVSWSKERLV VDDERRRIRYEIVDSNIGFKSYVSTI+VVEGGDGG
Sbjct: 61  CSGFSIPSTDGSDSVVSWSKERLVTVDDERRRIRYEIVDSNIGFKSYVSTIKVVEGGDGG 120

Query: 121 VIEWSFVVEAVEGLKLEDLVKKFETGLKSMARRMEVAVQKN 162
           VIEWSFVVEAVEGLKLEDLVKKFE GLKSMA+RMEVAVQ+N
Sbjct: 121 VIEWSFVVEAVEGLKLEDLVKKFERGLKSMAKRMEVAVQQN 161

[Close]

BLAST of Carg03835 vs. NCBI nr
Match: XP_022131917.1 (lachrymatory-factor synthase [Momordica charantia])

HSP 1 Score: 266.2 bits (679), Expect = 7.4e-68
Identity = 126/159 (79.25%), Postives = 140/159 (88.05%), Query Frame = 0


Query: 1   MAENSAAKWEGRVSEALQGATADQIWPMLKDFFNLHKWFPTLANCYGLSGTNGEVGCVRF 60
           MAE S AKWEGRVSEAL  A+ADQIWPMLKDFFN HKWFPTLA CYG++GTNGEVGCVRF
Sbjct: 1   MAETSPAKWEGRVSEALTVASADQIWPMLKDFFNFHKWFPTLATCYGIAGTNGEVGCVRF 60

Query: 61  CSGFSIPSTDGSDSVVSWSKERLVAVDDERRRIRYEIVDSNIGFKSYVSTIEVVEGGDGG 120
           CSGFSIPS DG+D VVSWSKERL+AVDD+ RRIRYEIVDSNIGFKSYV+TIE+  GG  G
Sbjct: 61  CSGFSIPSLDGADRVVSWSKERLLAVDDDSRRIRYEIVDSNIGFKSYVATIEIAPGGGDG 120

Query: 121 VIEWSFVVEAVEGLKLEDLVKKFETGLKSMARRMEVAVQ 160
           VIEW F VE VEGLKLEDLVKK++ GL+SM +RME A++
Sbjct: 121 VIEWRFAVEPVEGLKLEDLVKKYQEGLRSMVKRMEAALE 159

[Close]

BLAST of Carg03835 vs. NCBI nr
Match: XP_008445005.1 (PREDICTED: lachrymatory-factor synthase [Cucumis melo])

HSP 1 Score: 250.8 bits (639), Expect = 3.2e-63
Identity = 128/161 (79.50%), Postives = 139/161 (86.34%), Query Frame = 0


Query: 1   MAENSAAKWEGRVSEALQGATADQIWPMLKDFFNLHKWFPTLANCYGLSGT-NGEVGCVR 60
           MAEN A+KWEGRV++ L  AT DQIWPM+KDFFN HKWFPTLANCYGLSGT N EVG VR
Sbjct: 17  MAENPASKWEGRVTQTLTLATPDQIWPMIKDFFNFHKWFPTLANCYGLSGTNNAEVGSVR 76

Query: 61  FCSGFSIP-STDGSDSVVSWSKERLVAVDDERRRIRYEIVDSNIGFKSYVSTIEVVEGGD 120
           FCSGFSIP S+DGSD VVSWSKERLV VD+E RRI YE+VDSNIGFKSYV+T+EV EGG 
Sbjct: 77  FCSGFSIPSSSDGSDGVVSWSKERLVGVDEEHRRICYEMVDSNIGFKSYVATMEVGEGGG 136

Query: 121 GG-VIEWSFVVEAVEGLKLEDLVKKFETGLKSMARRMEVAV 159
           GG VIEW F VEAVEGLKLEDLVKK+E GL+SMA RME AV
Sbjct: 137 GGCVIEWRFEVEAVEGLKLEDLVKKYEVGLRSMANRMEAAV 177

[Close]

BLAST of Carg03835 vs. TAIR10
Match: AT2G25770.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein)

HSP 1 Score: 182.2 bits (461), Expect = 2.6e-46
Identity = 89/153 (58.17%), Postives = 112/153 (73.20%), Query Frame = 0


Query: 4   NSAAKWEGRVSEALQGATADQIWPMLKDFFNLHKWFPTLANCYGLSGTNGEVGCVRFCSG 63
           +S  KW  +VS  L  A  D+IWP+  DFFNLHKW PTLA C+G+ G NGE GC+RFCSG
Sbjct: 5   SSPEKWLAKVSVTLTKAKPDEIWPLFTDFFNLHKWLPTLATCHGVHGNNGEQGCIRFCSG 64

Query: 64  FSIPSTDGSDSVVSWSKERLVAVDDERRRIRYEIVDSNIGFKSYVSTIEVV-EGGDGGVI 123
           FSI S +G DS   WSKE+LVAV+   R +RYEIV+SN GF+SYVST++++  G DG VI
Sbjct: 65  FSIGS-NGVDSAARWSKEKLVAVNPVERVMRYEIVESNTGFESYVSTVKILPRGEDGCVI 124

Query: 124 EWSFVVEAVEGLKLEDLVKKFETGLKSMARRME 156
           EWSF V+ V GL LE+LVKK+E  L+ + + ME
Sbjct: 125 EWSFTVDPVRGLSLENLVKKYEKALEIITKNME 156

[Close]

BLAST of Carg03835 vs. TAIR10
Match: AT4G32870.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein)

HSP 1 Score: 125.6 bits (314), Expect = 2.8e-29
Identity = 63/157 (40.13%), Postives = 99/157 (63.06%), Query Frame = 0


Query: 3   ENSAAKWEGRVSEALQGATADQIWPMLKDFFNLHKWFPTLANCYGLSGTNGEVGCVRFCS 62
           E  + KWEG+    + G TA+++W +  DF N+ +WFP++  CY + GT+G  G +R+CS
Sbjct: 4   ETVSFKWEGKKVAQVNGVTAEKVWSVFSDFCNVQEWFPSVDTCYRVQGTDGVPGLIRYCS 63

Query: 63  GFSIPSTDGSDSVVSWSKERLVAVDDERRRIRYEIVDSNIGFKSYVSTIEV--VEGGDG- 122
                +T   +    W+KE+LV +D   R + YEI+++N+GF+SYV+T++V  V+G D  
Sbjct: 64  -----TTKTKEEGSRWAKEKLVKIDPIGRCLSYEILENNVGFRSYVATVQVTPVDGEDQV 123

Query: 123 GVIEWSFVVEAVEGLKLEDLVKKFETGLKSMARRMEV 157
             IEWSFV + V+G K EDL    +  L+ MA +ME+
Sbjct: 124 SRIEWSFVADPVDGWKKEDLESYVDFCLQHMANKMEL 155

[Close]

BLAST of Carg03835 vs. Swiss-Prot
Match: sp|P59082|LFS_ALLCE (Lachrymatory-factor synthase OS=Allium cepa OX=4679 GN=LFS PE=1 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 3.3e-19
Identity = 48/133 (36.09%), Postives = 73/133 (54.89%), Query Frame = 0


Query: 4   NSAAKWEGRVSEALQGATADQIWPMLKDFFNLHKWFPTLANCYGLSGTNGEVGCVRFCSG 63
           N A KW G+V   L     +Q W +LKDF NLHK  P+L+ C  + G    VGCVR+  G
Sbjct: 16  NGARKWSGKVHALLPNTKPEQAWTLLKDFINLHKVMPSLSVCELVEGEANVVGCVRYVKG 75

Query: 64  FSIPSTDGSDSVVSWSKERLVAVDDERRRIRYEIVDSNIGFKSYVSTIEVVEGGD--GGV 123
              P  +       W+KE+LVA+D++     Y   +   G++ Y +T+++VEG +  G  
Sbjct: 76  IMHPIEE-----EFWAKEKLVALDNKNMSYSYIFTECFTGYEDYTATMQIVEGPEHKGSR 135

Query: 124 IEWSFVVEAVEGL 135
            +WSF  + +EG+
Sbjct: 136 FDWSFQCKYIEGM 143

[Close]

BLAST of Carg03835 vs. TrEMBL
Match: tr|A0A1S3BB80|A0A1S3BB80_CUCME (lachrymatory-factor synthase OS=Cucumis melo OX=3656 GN=LOC103488175 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 2.1e-63
Identity = 128/161 (79.50%), Postives = 139/161 (86.34%), Query Frame = 0


Query: 1   MAENSAAKWEGRVSEALQGATADQIWPMLKDFFNLHKWFPTLANCYGLSGT-NGEVGCVR 60
           MAEN A+KWEGRV++ L  AT DQIWPM+KDFFN HKWFPTLANCYGLSGT N EVG VR
Sbjct: 17  MAENPASKWEGRVTQTLTLATPDQIWPMIKDFFNFHKWFPTLANCYGLSGTNNAEVGSVR 76

Query: 61  FCSGFSIP-STDGSDSVVSWSKERLVAVDDERRRIRYEIVDSNIGFKSYVSTIEVVEGGD 120
           FCSGFSIP S+DGSD VVSWSKERLV VD+E RRI YE+VDSNIGFKSYV+T+EV EGG 
Sbjct: 77  FCSGFSIPSSSDGSDGVVSWSKERLVGVDEEHRRICYEMVDSNIGFKSYVATMEVGEGGG 136

Query: 121 GG-VIEWSFVVEAVEGLKLEDLVKKFETGLKSMARRMEVAV 159
           GG VIEW F VEAVEGLKLEDLVKK+E GL+SMA RME AV
Sbjct: 137 GGCVIEWRFEVEAVEGLKLEDLVKKYEVGLRSMANRMEAAV 177

[Close]

BLAST of Carg03835 vs. TrEMBL
Match: tr|A0A0A0LPR8|A0A0A0LPR8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G373500 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 3.7e-63
Identity = 126/158 (79.75%), Postives = 136/158 (86.08%), Query Frame = 0


Query: 6   AAKWEGRVSEALQGATADQIWPMLKDFFNLHKWFPTLANCYGLSGTNGEVGCVRFCSGFS 65
           AAKWEGRV+E L  AT DQIWPM+KDFFN HKWFPTLANCYGLSGTN EVG VRFCSGFS
Sbjct: 18  AAKWEGRVTETLTVATPDQIWPMIKDFFNFHKWFPTLANCYGLSGTNAEVGSVRFCSGFS 77

Query: 66  IPSTDGSDSVVSWSKERLVAVDDERRRIRYEIVDSNIGFKSYVSTIEV--VEGGDGGVIE 125
           IPS+DGSD VVSWSKERLV VD+E RRI YEIVDSNIGFKSYV+T+EV  V GG G +IE
Sbjct: 78  IPSSDGSDGVVSWSKERLVGVDEEHRRICYEIVDSNIGFKSYVATMEVGSVSGG-GCMIE 137

Query: 126 WSFVVEAVEGLKLEDLVKKFETGLKSMARRMEVAVQKN 162
           W F VEAVEGLKLEDLVKK+E GL+SMA RME AV +N
Sbjct: 138 WRFEVEAVEGLKLEDLVKKYEVGLRSMANRMEAAVVEN 174

[Close]

BLAST of Carg03835 vs. TrEMBL
Match: tr|A0A2P4H3T8|A0A2P4H3T8_QUESU (Lachrymatory-factor synthase OS=Quercus suber OX=58331 GN=CFP56_31093 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 5.3e-54
Identity = 101/156 (64.74%), Postives = 123/156 (78.85%), Query Frame = 0


Query: 1   MAENSAAKWEGRVSEALQGATADQIWPMLKDFFNLHKWFPTLANCYGLSGTNGEVGCVRF 60
           M   S +KWEG+    L  ATADQ+W + KDFFN HKWFP+LA CYG+ GTNGE GC+R+
Sbjct: 1   MESKSNSKWEGKACTKLTNATADQVWLLYKDFFNFHKWFPSLATCYGIHGTNGEPGCIRY 60

Query: 61  CSGFSIPSTDGSDSVVSWSKERLVAVDDERRRIRYEIVDSNIGFKSYVSTIEVVEGGDGG 120
           C+GFSIPS DG +  VSWSKERL+AVDD+ RR+ YEIVDSNIGFKSYVST+++V  GD G
Sbjct: 61  CAGFSIPSNDGDNKPVSWSKERLIAVDDDERRLSYEIVDSNIGFKSYVSTVKIVPQGDEG 120

Query: 121 -VIEWSFVVEAVEGLKLEDLVKKFETGLKSMARRME 156
            +IEWSF V+ VEG  L+DLVKK+E GL+ M +RME
Sbjct: 121 CMIEWSFTVDKVEGWVLDDLVKKYEVGLQRMVKRME 156

[Close]

BLAST of Carg03835 vs. TrEMBL
Match: tr|A0A2N9GID2|A0A2N9GID2_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS27071 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 3.2e-51
Identity = 99/160 (61.88%), Postives = 123/160 (76.88%), Query Frame = 0


Query: 1   MAENSAAKWEGRVSEALQGATADQIWPMLKDFFNLHKWFPTLANCYGLSGTNGEVGCVRF 60
           M + S  KWEG+V   L  ATADQ+W + KDFFN HKWFP+LA CYG+ GTN E GC+R+
Sbjct: 1   MEQMSQPKWEGKVCTTLTNATADQVWHLYKDFFNFHKWFPSLATCYGIHGTNSEPGCIRY 60

Query: 61  CSGFSIPSTDGSDSVVSWSKERLVAVDDERRRIRYEIVDSNIGFKSYVSTIEVVEGGDGG 120
           C+GFSIPS DG D  VSWSKERL+AVDD+RR + YEIVDSNIGF+SYVST+++V  GD G
Sbjct: 61  CAGFSIPSNDG-DKPVSWSKERLIAVDDDRRSLSYEIVDSNIGFESYVSTVKIVPQGDEG 120

Query: 121 -----VIEWSFVVEAVEGLKLEDLVKKFETGLKSMARRME 156
                +IEWSF +  +EG  L+DLV+K+E GL+ MA+RME
Sbjct: 121 DQDGCMIEWSFTLNKMEGWVLDDLVRKYEVGLQRMAKRME 159

[Close]

BLAST of Carg03835 vs. TrEMBL
Match: tr|A0A2I4GNM7|A0A2I4GNM7_9ROSI (lachrymatory-factor synthase OS=Juglans regia OX=51240 GN=LOC109009473 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 7.1e-51
Identity = 99/157 (63.06%), Postives = 122/157 (77.71%), Query Frame = 0


Query: 8   KWEGRVSEALQGATADQIWPMLKDFFNLHKWFPTLANCYGLSGTNGEVGCVRFCSGFSIP 67
           KWEG+VS  L GA ADQIWP+ KDFFN HKWFP LA CYG+ GTNGE GC+R C+GFSIP
Sbjct: 11  KWEGKVSARLNGAVADQIWPLFKDFFNFHKWFPGLATCYGIHGTNGEPGCIRDCAGFSIP 70

Query: 68  STDGSDSVVSWSKERLVAVDDERRRIRYEIVDSNIGFKSYVSTIEVVEGGDGG----VIE 127
           S  G DS VSWS ERL+AVDD+ R + YEIVD NIGF+SYV+T+++V  GD G    VIE
Sbjct: 71  SDSGGDS-VSWSNERLIAVDDDSRSLSYEIVDCNIGFESYVATVKIVPQGDDGQAGCVIE 130

Query: 128 WSFVVEAVEGLKLEDLVKKFETGLKSMARRMEVAVQK 161
           WSF V+ VEG   +DLV+++E GL+ MA+RME A+++
Sbjct: 131 WSFTVDPVEGWARDDLVRRYEVGLQRMAQRMEDALRE 166

The following BLAST results are available for this feature:

BLAST of Carg03835 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022951556.1	5.1e-85	99.38	lachrymatory-factor synthase [Cucurbita moschata]	[more]
XP_023537781.1	7.4e-84	98.74	lachrymatory-factor synthase [Cucurbita pepo subsp. pepo]	[more]
XP_023002531.1	1.8e-82	95.65	lachrymatory-factor synthase-like [Cucurbita maxima]	[more]
XP_022131917.1	7.4e-68	79.25	lachrymatory-factor synthase [Momordica charantia]	[more]
XP_008445005.1	3.2e-63	79.50	PREDICTED: lachrymatory-factor synthase [Cucumis melo]	[more]

BLAST of Carg03835 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G25770.1	2.6e-46	58.17	Polyketide cyclase/dehydrase and lipid transport superfamily protein	[more]
AT4G32870.1	2.8e-29	40.13	Polyketide cyclase/dehydrase and lipid transport superfamily protein	[more]

BLAST of Carg03835 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P59082\|LFS_ALLCE	3.3e-19	36.09	Lachrymatory-factor synthase OS=Allium cepa OX=4679 GN=LFS PE=1 SV=1	[more]

BLAST of Carg03835 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BB80\|A0A1S3BB80_CUCME	2.1e-63	79.50	lachrymatory-factor synthase OS=Cucumis melo OX=3656 GN=LOC103488175 PE=4 SV=1	[more]
tr\|A0A0A0LPR8\|A0A0A0LPR8_CUCSA	3.7e-63	79.75	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G373500 PE=4 SV=1	[more]
tr\|A0A2P4H3T8\|A0A2P4H3T8_QUESU	5.3e-54	64.74	Lachrymatory-factor synthase OS=Quercus suber OX=58331 GN=CFP56_31093 PE=4 SV=1	[more]
tr\|A0A2N9GID2\|A0A2N9GID2_FAGSY	3.2e-51	61.88	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS27071 PE=4 SV=1	[more]
tr\|A0A2I4GNM7\|A0A2I4GNM7_9ROSI	7.1e-51	63.06	lachrymatory-factor synthase OS=Juglans regia OX=51240 GN=LOC109009473 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR023393	START-like_dom_sf
IPR019587	Polyketide_cyclase/dehydratase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg03835-RA	Carg03835-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 154..161
None	No IPR available	PANTHER	PTHR33789	FAMILY NOT NAMED	coord: 3..160
None	No IPR available	PANTHER	PTHR33789:SF3	SUBFAMILY NOT NAMED	coord: 3..160
None	No IPR available	CDD	cd07821	PYR_PYL_RCAR_like	coord: 9..155 e-value: 2.44084E-34 score: 118.195
None	No IPR available	SUPERFAMILY	SSF55961	Bet v1-like	coord: 19..160
IPR019587	Polyketide cyclase/dehydrase	PFAM	PF10604	Polyketide_cyc2	coord: 18..155 e-value: 2.6E-25 score: 89.3
IPR023393	START-like domain superfamily	GENE3D	G3DSA:3.30.530.20		coord: 3..160 e-value: 4.5E-48 score: 165.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg03835	Cla022203	Watermelon (97103) v1	carwmB0978
Carg03835	Csa2G373480	Cucumber (Chinese Long) v2	carcuB0987
Carg03835	MELO3C011134	Melon (DHL92) v3.5.1	carmeB0955
Carg03835	ClCG08G012160	Watermelon (Charleston Gray)	carwcgB0958
Carg03835	CSPI02G22150	Wild cucumber (PI 183967)	carcpiB1010
Carg03835	Cucsa.161200	Cucumber (Gy14) v1	carcgyB1091
Carg03835	CmaCh05G005870	Cucurbita maxima (Rimu)	carcmaB1356
Carg03835	CmaCh12G002450	Cucurbita maxima (Rimu)	carcmaB1349
Carg03835	CmoCh05G006120	Cucurbita moschata (Rifu)	carcmoB1318
Carg03835	Lsi08G010770	Bottle gourd (USVL1VR-Ls)	carlsiB898
Carg03835	Cp4.1LG11g05210	Cucurbita pepo (Zucchini)	carcpeB1351
Carg03835	Cp4.1LG07g02380	Cucurbita pepo (Zucchini)	carcpeB1368
Carg03835	CsGy2G021890	Cucumber (Gy14) v2	carcgybB0960
Carg03835	MELO3C011134.2	Melon (DHL92) v3.6.1	carmedB0961
Carg03835	CsaV3_2G030780	Cucumber (Chinese Long) v3	carcucB1015
Carg03835	Cla97C08G155310	Watermelon (97103) v2	carwmbB1034
Carg03835	Bhi04G000706	Wax gourd	carwgoB1147

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg03835	Carg08274	Silver-seed gourd	carcarB071

The following block(s) are covering this gene:


Gene	Organism	Block
Carg03835	Cucurbita moschata (Rifu)	carcmoB1310