Carg03820 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg03820
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Bidirectional sugar transporter SWEET
Location	Cucurbita_argyrosperma_scaffold_011 : 191010 .. 191815 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCATCTTCTTCTTCTTCTTCTTCTTCTTTAAAACAATATCCTCCATCAAACACACAGAGAGAGGGCTTAGGGTTTGCTGCCCAAACCCACCCTCTGCTTTGTGCTTCACAACAACAACAACAACAAACAAACATCAACATCAACATCAACTCAACCCTCCTGTGCTGCTCTTCATTTGCTTGGAGGAAGAAACAATGGCCCTTTTTCACACTCCCCATCTCTTAGTTTTCACTTTTGGCATTCTTGGTACTCATTCAACCATTCCCTAAAACTATCCTAACCCACAAATATATCATTATTTTAAAATAAACTCTAATAATGCATTAATGGCTTCTCAACCAACTTAACTTAAAACCTTTTCATTTGCAGGTAACATCGTTTCCTTCTTCGTCTACTTGGCTCCTTTGTAACTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCTCTCCATATTTCCCTTTCAAATTCTTACTACACAAAATGTGTATATTTAGATGCTCTTCTTTTTTTACAAATTCCATTCTCTCTCAGGCCGACATTCAACAGAATATGGCGAAAGAAGTCGACGGAGGGCTTCCACGCGCTGCCGTATTTAGTAGCACTCTTCAGCTCCGCCCTGTGGCTCTTCTACGCCTTCCTCAAAACCAACACTTTCCTTCTCGTCACCATCAACTCCTTTGGCTGCGTCATCGAGTTTCTCTACTTCCTCCTCTTTATTCTATTCGCCACCAACCCAATTAGGGTCCGTTTTCATATCCAATTGCATTGCTACCATCTTAAATTACTGCCTTCTGAACAACTTCTGTGA

mRNA sequence

ATCATCTTCTTCTTCTTCTTCTTCTTCTTTAAAACAATATCCTCCATCAAACACACAGAGAGAGGGCTTAGGGTTTGCTGCCCAAACCCACCCTCTGCTTTGTGCTTCACAACAACAACAACAACAAACAAACATCAACATCAACATCAACTCAACCCTCCTGTGCTGCTCTTCATTTGCTTGGAGGAAGAAACAATGGCCCTTTTTCACACTCCCCATCTCTTAGTTTTCACTTTTGGCATTCTTGGTAACATCGTTTCCTTCTTCGTCTACTTGGCTCCTTTGCCGACATTCAACAGAATATGGCGAAAGAAGTCGACGGAGGGCTTCCACGCGCTGCCGTATTTAGTAGCACTCTTCAGCTCCGCCCTGTGGCTCTTCTACGCCTTCCTCAAAACCAACACTTTCCTTCTCGTCACCATCAACTCCTTTGGCTGCGTCATCGAGTTTCTCTACTTCCTCCTCTTTATTCTATTCGCCACCAACCCAATTAGGGTCCGTTTTCATATCCAATTGCATTGCTACCATCTTAAATTACTGCCTTCTGAACAACTTCTGTGA

Coding sequence (CDS)

ATGGCCCTTTTTCACACTCCCCATCTCTTAGTTTTCACTTTTGGCATTCTTGGTAACATCGTTTCCTTCTTCGTCTACTTGGCTCCTTTGCCGACATTCAACAGAATATGGCGAAAGAAGTCGACGGAGGGCTTCCACGCGCTGCCGTATTTAGTAGCACTCTTCAGCTCCGCCCTGTGGCTCTTCTACGCCTTCCTCAAAACCAACACTTTCCTTCTCGTCACCATCAACTCCTTTGGCTGCGTCATCGAGTTTCTCTACTTCCTCCTCTTTATTCTATTCGCCACCAACCCAATTAGGGTCCGTTTTCATATCCAATTGCATTGCTACCATCTTAAATTACTGCCTTCTGAACAACTTCTGTGA

Protein sequence

MALFHTPHLLVFTFGILGNIVSFFVYLAPLPTFNRIWRKKSTEGFHALPYLVALFSSALWLFYAFLKTNTFLLVTINSFGCVIEFLYFLLFILFATNPIRVRFHIQLHCYHLKLLPSEQLL

Homology

[Close]

BLAST of Carg03820 vs. NCBI nr
Match: XP_022960350.1 (bidirectional sugar transporter N3-like [Cucurbita moschata])

HSP 1 Score: 198.4 bits (503), Expect = 1.4e-47
Identity = 99/101 (98.02%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MALFHTPHLLVFTFGILGNIVSFFVYLAPLPTFNRIWRKKSTEGFHALPYLVALFSSALW 60
           MALFHTPHLLVFTFGILGNIVSFFVYLAPLPTFNRIWRKKSTEGFHALPYLVALFSSALW
Sbjct: 1   MALFHTPHLLVFTFGILGNIVSFFVYLAPLPTFNRIWRKKSTEGFHALPYLVALFSSALW 60

Query: 61  LFYAFLKTNTFLLVTINSFGCVIEFLYFLLFILFATNPIRV 102
           LFYAFLKTNTFLL+TINSFGCVIEFLYFLLFILFATNPIR+
Sbjct: 61  LFYAFLKTNTFLLITINSFGCVIEFLYFLLFILFATNPIRM 101

[Close]

BLAST of Carg03820 vs. NCBI nr
Match: XP_023513923.1 (bidirectional sugar transporter N3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 198.4 bits (503), Expect = 1.4e-47
Identity = 99/101 (98.02%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MALFHTPHLLVFTFGILGNIVSFFVYLAPLPTFNRIWRKKSTEGFHALPYLVALFSSALW 60
           MALFHTPHLLVFTFGILGNIVSFFVYLAPLPTFNRIWRKKSTEGFHALPYLVALFSSALW
Sbjct: 1   MALFHTPHLLVFTFGILGNIVSFFVYLAPLPTFNRIWRKKSTEGFHALPYLVALFSSALW 60

Query: 61  LFYAFLKTNTFLLVTINSFGCVIEFLYFLLFILFATNPIRV 102
           LFYAFLKTNTFLL+TINSFGCVIEFLYFLLFILFATNPIR+
Sbjct: 61  LFYAFLKTNTFLLITINSFGCVIEFLYFLLFILFATNPIRM 101

[Close]

BLAST of Carg03820 vs. NCBI nr
Match: XP_023004306.1 (bidirectional sugar transporter N3-like [Cucurbita maxima])

HSP 1 Score: 196.4 bits (498), Expect = 5.4e-47
Identity = 98/101 (97.03%), Postives = 100/101 (99.01%), Query Frame = 0


Query: 1   MALFHTPHLLVFTFGILGNIVSFFVYLAPLPTFNRIWRKKSTEGFHALPYLVALFSSALW 60
           MA FHTPHLLVFTFGILGNIVSFFVYLAPLPTFNRIWRKKSTEGFHALPYLVALFSSALW
Sbjct: 1   MAPFHTPHLLVFTFGILGNIVSFFVYLAPLPTFNRIWRKKSTEGFHALPYLVALFSSALW 60

Query: 61  LFYAFLKTNTFLLVTINSFGCVIEFLYFLLFILFATNPIRV 102
           LFYAFLKTNTFLL+TINSFGCVIEFLYFLLFILFATNPIR+
Sbjct: 61  LFYAFLKTNTFLLITINSFGCVIEFLYFLLFILFATNPIRI 101

[Close]

BLAST of Carg03820 vs. NCBI nr
Match: XP_008459891.1 (PREDICTED: bidirectional sugar transporter N3 [Cucumis melo])

HSP 1 Score: 178.7 bits (452), Expect = 1.2e-41
Identity = 86/101 (85.15%), Postives = 97/101 (96.04%), Query Frame = 0


Query: 1   MALFHTPHLLVFTFGILGNIVSFFVYLAPLPTFNRIWRKKSTEGFHALPYLVALFSSALW 60
           MA+FH+PHLLVFTFG+LGNI+SFFVYLAPLPTF RIW+KKSTEGFHALPYLVALFSSALW
Sbjct: 1   MAIFHSPHLLVFTFGLLGNIISFFVYLAPLPTFYRIWQKKSTEGFHALPYLVALFSSALW 60

Query: 61  LFYAFLKTNTFLLVTINSFGCVIEFLYFLLFILFATNPIRV 102
           L YAFLKTNTFLL+TINSFGCVIEFLYF++FI+FA N +R+
Sbjct: 61  LCYAFLKTNTFLLITINSFGCVIEFLYFIVFIVFAANSVRM 101

[Close]

BLAST of Carg03820 vs. NCBI nr
Match: XP_004140547.1 (PREDICTED: bidirectional sugar transporter N3 [Cucumis sativus] >KGN46429.1 hypothetical protein Csa_6G092510 [Cucumis sativus])

HSP 1 Score: 177.2 bits (448), Expect = 3.4e-41
Identity = 85/101 (84.16%), Postives = 96/101 (95.05%), Query Frame = 0


Query: 1   MALFHTPHLLVFTFGILGNIVSFFVYLAPLPTFNRIWRKKSTEGFHALPYLVALFSSALW 60
           M +FH+PHLLVFTFG+LGNI+SFFVYLAPLPTF RIW+KKSTEGFHALPYLVALFSSALW
Sbjct: 1   MTIFHSPHLLVFTFGLLGNIISFFVYLAPLPTFYRIWQKKSTEGFHALPYLVALFSSALW 60

Query: 61  LFYAFLKTNTFLLVTINSFGCVIEFLYFLLFILFATNPIRV 102
           L YAFLKTNTFLL+TINSFGCVIEFLYF++FI+FA N +R+
Sbjct: 61  LCYAFLKTNTFLLITINSFGCVIEFLYFIVFIVFAANSVRM 101

[Close]

BLAST of Carg03820 vs. TAIR10
Match: AT3G48740.1 (Nodulin MtN3 family protein)

HSP 1 Score: 122.9 bits (307), Expect = 1.4e-28
Identity = 57/101 (56.44%), Postives = 80/101 (79.21%), Query Frame = 0


Query: 1   MALFHTPHLLVFTFGILGNIVSFFVYLAPLPTFNRIWRKKSTEGFHALPYLVALFSSALW 60
           M+LF+T +   F FG+LGN++SF V+L+P+PTF RIW+KK+TEGF ++PY+VALFS+ LW
Sbjct: 1   MSLFNTENTWAFVFGLLGNLISFAVFLSPVPTFYRIWKKKTTEGFQSIPYVVALFSATLW 60

Query: 61  LFYAFLKTNTFLLVTINSFGCVIEFLYFLLFILFATNPIRV 102
           L+YA  K + FLLVTIN+FGC IE +Y  +F+ +A  P R+
Sbjct: 61  LYYATQKKDVFLLVTINAFGCFIETIYISMFLAYAPKPARM 101

[Close]

BLAST of Carg03820 vs. TAIR10
Match: AT5G13170.1 (senescence-associated gene 29)

HSP 1 Score: 119.0 bits (297), Expect = 2.0e-27
Identity = 57/101 (56.44%), Postives = 75/101 (74.26%), Query Frame = 0


Query: 1   MALFHTPHLLVFTFGILGNIVSFFVYLAPLPTFNRIWRKKSTEGFHALPYLVALFSSALW 60
           M +    H L F FGILGN++SF V+LAP+PTF RI+++KSTE F +LPY V+LFS  LW
Sbjct: 1   MGVMINHHFLAFIFGILGNVISFLVFLAPVPTFYRIYKRKSTESFQSLPYQVSLFSCMLW 60

Query: 61  LFYAFLKTNTFLLVTINSFGCVIEFLYFLLFILFATNPIRV 102
           L+YA +K + FLL+TINSFGCV+E LY  +F  +AT   R+
Sbjct: 61  LYYALIKKDAFLLITINSFGCVVETLYIAMFFAYATREKRI 101

[Close]

BLAST of Carg03820 vs. TAIR10
Match: AT5G23660.1 (homolog of Medicago truncatula MTN3)

HSP 1 Score: 117.9 bits (294), Expect = 4.5e-27
Identity = 58/101 (57.43%), Postives = 78/101 (77.23%), Query Frame = 0


Query: 1   MALFHTPHLLVFTFGILGNIVSFFVYLAPLPTFNRIWRKKSTEGFHALPYLVALFSSALW 60
           MALF T +   F FG+LGN++SF V+L+P+PTF RI +KK+TEGF ++PY+VALFS+ LW
Sbjct: 1   MALFDTHNTWAFVFGLLGNLISFAVFLSPVPTFYRICKKKTTEGFQSIPYVVALFSAMLW 60

Query: 61  LFYAFLKTNTFLLVTINSFGCVIEFLYFLLFILFATNPIRV 102
           L+YA  K + FLLVTINSFGC IE +Y  +F+ FA+   R+
Sbjct: 61  LYYATQKKDVFLLVTINSFGCFIETIYISIFVAFASKKARM 101

[Close]

BLAST of Carg03820 vs. TAIR10
Match: AT5G50800.1 (Nodulin MtN3 family protein)

HSP 1 Score: 114.0 bits (284), Expect = 6.4e-26
Identity = 58/97 (59.79%), Postives = 75/97 (77.32%), Query Frame = 0


Query: 6   TPHLLVFTFGILGNIVSFFVYLAPLPTFNRIWRKKSTEGFHALPYLVALFSSALWLFYAF 65
           T +L  F FGILGNI+SF V+LAP+PTF RI +KKSTEGF +LPY+ ALFS+ LW++YA 
Sbjct: 4   TNNLWAFVFGILGNIISFVVFLAPVPTFVRICKKKSTEGFQSLPYVSALFSAMLWIYYAM 63

Query: 66  LKTNT-FLLVTINSFGCVIEFLYFLLFILFATNPIRV 102
            K  T FLL+TIN+FGCVIE +Y +LF+ +A    R+
Sbjct: 64  QKDGTAFLLITINAFGCVIETIYIVLFVSYANKKTRI 100

[Close]

BLAST of Carg03820 vs. TAIR10
Match: AT4G25010.1 (Nodulin MtN3 family protein)

HSP 1 Score: 106.7 bits (265), Expect = 1.0e-23
Identity = 54/97 (55.67%), Postives = 72/97 (74.23%), Query Frame = 0


Query: 6   TPHLLVFTFGILGNIVSFFVYLAPLPTFNRIWRKKSTEGFHALPYLVALFSSALWLFYAF 65
           T ++L  TFG+LGNI+SF V+LAP+PTF RI +KKS EGF +LPY+ ALFS+ LW++YA 
Sbjct: 4   THNVLAVTFGVLGNIISFIVFLAPVPTFVRICKKKSIEGFESLPYVSALFSAMLWIYYAL 63

Query: 66  LKTNT-FLLVTINSFGCVIEFLYFLLFILFATNPIRV 102
            K    FLL+TIN+ GC IE +Y +LFI +A    R+
Sbjct: 64  QKDGAGFLLITINAVGCFIETIYIILFITYANKKARI 100

[Close]

BLAST of Carg03820 vs. Swiss-Prot
Match: sp|P93332|NOD3_MEDTR (Bidirectional sugar transporter N3 OS=Medicago truncatula OX=3880 GN=N3 PE=2 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 6.6e-28
Identity = 62/100 (62.00%), Postives = 81/100 (81.00%), Query Frame = 0


Query: 1   MALFHTPHLLVFTFGILGNIVSFFVYLAPLPTFNRIWRKKSTEGFHALPYLVALFSSALW 60
           MA+ H  + L FTFG+LGN++SF V+LAP+ TF RI++KKSTEGF +LPYLVALFSS LW
Sbjct: 1   MAISH--NTLAFTFGMLGNVISFLVFLAPISTFYRIYKKKSTEGFQSLPYLVALFSSMLW 60

Query: 61  LFYAFLKTNTFLLVTINSFGCVIEFLYFLLFILFATNPIR 101
           L+YA LK + FLL+TINSFGCV+E +Y +L+I++A    R
Sbjct: 61  LYYALLKKDAFLLITINSFGCVVETIYIILYIIYAPRDAR 98

[Close]

BLAST of Carg03820 vs. Swiss-Prot
Match: sp|Q9SMM5|SWT11_ARATH (Bidirectional sugar transporter SWEET11 OS=Arabidopsis thaliana OX=3702 GN=SWEET11 PE=1 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 2.5e-27
Identity = 57/101 (56.44%), Postives = 80/101 (79.21%), Query Frame = 0


Query: 1   MALFHTPHLLVFTFGILGNIVSFFVYLAPLPTFNRIWRKKSTEGFHALPYLVALFSSALW 60
           M+LF+T +   F FG+LGN++SF V+L+P+PTF RIW+KK+TEGF ++PY+VALFS+ LW
Sbjct: 1   MSLFNTENTWAFVFGLLGNLISFAVFLSPVPTFYRIWKKKTTEGFQSIPYVVALFSATLW 60

Query: 61  LFYAFLKTNTFLLVTINSFGCVIEFLYFLLFILFATNPIRV 102
           L+YA  K + FLLVTIN+FGC IE +Y  +F+ +A  P R+
Sbjct: 61  LYYATQKKDVFLLVTINAFGCFIETIYISMFLAYAPKPARM 101

[Close]

BLAST of Carg03820 vs. Swiss-Prot
Match: sp|Q9FY94|SWT15_ARATH (Bidirectional sugar transporter SWEET15 OS=Arabidopsis thaliana OX=3702 GN=SWEET15 PE=1 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 3.6e-26
Identity = 57/101 (56.44%), Postives = 75/101 (74.26%), Query Frame = 0


Query: 1   MALFHTPHLLVFTFGILGNIVSFFVYLAPLPTFNRIWRKKSTEGFHALPYLVALFSSALW 60
           M +    H L F FGILGN++SF V+LAP+PTF RI+++KSTE F +LPY V+LFS  LW
Sbjct: 1   MGVMINHHFLAFIFGILGNVISFLVFLAPVPTFYRIYKRKSTESFQSLPYQVSLFSCMLW 60

Query: 61  LFYAFLKTNTFLLVTINSFGCVIEFLYFLLFILFATNPIRV 102
           L+YA +K + FLL+TINSFGCV+E LY  +F  +AT   R+
Sbjct: 61  LYYALIKKDAFLLITINSFGCVVETLYIAMFFAYATREKRI 101

[Close]

BLAST of Carg03820 vs. Swiss-Prot
Match: sp|O82587|SWT12_ARATH (Bidirectional sugar transporter SWEET12 OS=Arabidopsis thaliana OX=3702 GN=SWEET12 PE=1 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 8.1e-26
Identity = 58/101 (57.43%), Postives = 78/101 (77.23%), Query Frame = 0


Query: 1   MALFHTPHLLVFTFGILGNIVSFFVYLAPLPTFNRIWRKKSTEGFHALPYLVALFSSALW 60
           MALF T +   F FG+LGN++SF V+L+P+PTF RI +KK+TEGF ++PY+VALFS+ LW
Sbjct: 1   MALFDTHNTWAFVFGLLGNLISFAVFLSPVPTFYRICKKKTTEGFQSIPYVVALFSAMLW 60

Query: 61  LFYAFLKTNTFLLVTINSFGCVIEFLYFLLFILFATNPIRV 102
           L+YA  K + FLLVTINSFGC IE +Y  +F+ FA+   R+
Sbjct: 61  LYYATQKKDVFLLVTINSFGCFIETIYISIFVAFASKKARM 101

[Close]

BLAST of Carg03820 vs. Swiss-Prot
Match: sp|P0DKJ5|SWT15_VITVI (Bidirectional sugar transporter SWEET15 OS=Vitis vinifera OX=29760 GN=SWEET15 PE=3 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.1e-25
Identity = 57/88 (64.77%), Postives = 69/88 (78.41%), Query Frame = 0


Query: 8  HLLVFTFGILGNIVSFFVYLAPLPTFNRIWRKKSTEGFHALPYLVALFSSALWLFYAFLK 67
          H L   FGILGNI+SF VY AP PTF RI+++KS EGFH+LPY+VALFS+ LWL+YA LK
Sbjct: 9  HTLGLIFGILGNIISFLVYFAPAPTFYRIYKRKSAEGFHSLPYIVALFSAMLWLYYALLK 68

Query: 68 TNTFLLVTINSFGCVIEFLYFLLFILFA 96
           + FLL+TINSFGC IE  Y LL+  +A
Sbjct: 69 KDAFLLITINSFGCAIESFYILLYFFYA 96

[Close]

BLAST of Carg03820 vs. TrEMBL
Match: tr|A0A1S3CAR4|A0A1S3CAR4_CUCME (Bidirectional sugar transporter SWEET OS=Cucumis melo OX=3656 GN=LOC103498874 PE=3 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 7.8e-42
Identity = 86/101 (85.15%), Postives = 97/101 (96.04%), Query Frame = 0


Query: 1   MALFHTPHLLVFTFGILGNIVSFFVYLAPLPTFNRIWRKKSTEGFHALPYLVALFSSALW 60
           MA+FH+PHLLVFTFG+LGNI+SFFVYLAPLPTF RIW+KKSTEGFHALPYLVALFSSALW
Sbjct: 1   MAIFHSPHLLVFTFGLLGNIISFFVYLAPLPTFYRIWQKKSTEGFHALPYLVALFSSALW 60

Query: 61  LFYAFLKTNTFLLVTINSFGCVIEFLYFLLFILFATNPIRV 102
           L YAFLKTNTFLL+TINSFGCVIEFLYF++FI+FA N +R+
Sbjct: 61  LCYAFLKTNTFLLITINSFGCVIEFLYFIVFIVFAANSVRM 101

[Close]

BLAST of Carg03820 vs. TrEMBL
Match: tr|A0A0A0KC70|A0A0A0KC70_CUCSA (Bidirectional sugar transporter SWEET OS=Cucumis sativus OX=3659 GN=Csa_6G092510 PE=3 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 2.3e-41
Identity = 85/101 (84.16%), Postives = 96/101 (95.05%), Query Frame = 0


Query: 1   MALFHTPHLLVFTFGILGNIVSFFVYLAPLPTFNRIWRKKSTEGFHALPYLVALFSSALW 60
           M +FH+PHLLVFTFG+LGNI+SFFVYLAPLPTF RIW+KKSTEGFHALPYLVALFSSALW
Sbjct: 1   MTIFHSPHLLVFTFGLLGNIISFFVYLAPLPTFYRIWQKKSTEGFHALPYLVALFSSALW 60

Query: 61  LFYAFLKTNTFLLVTINSFGCVIEFLYFLLFILFATNPIRV 102
           L YAFLKTNTFLL+TINSFGCVIEFLYF++FI+FA N +R+
Sbjct: 61  LCYAFLKTNTFLLITINSFGCVIEFLYFIVFIVFAANSVRM 101

[Close]

BLAST of Carg03820 vs. TrEMBL
Match: tr|A0A2C9UUD2|A0A2C9UUD2_MANES (Bidirectional sugar transporter SWEET OS=Manihot esculenta OX=3983 GN=MANES_12G006700 PE=3 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 8.3e-28
Identity = 67/101 (66.34%), Postives = 81/101 (80.20%), Query Frame = 0


Query: 1   MALFHTPHLLVFTFGILGNIVSFFVYLAPLPTFNRIWRKKSTEGFHALPYLVALFSSALW 60
           MA+  T H L FTFGILGNI+S  VYLAP+PTF RI+RKKSTEGF +LPY+VALFSS LW
Sbjct: 1   MAVMDTHHPLAFTFGILGNIISVMVYLAPMPTFLRIYRKKSTEGFQSLPYVVALFSSMLW 60

Query: 61  LFYAFLKTNTFLLVTINSFGCVIEFLYFLLFILFATNPIRV 102
           L YA LK + FLL+TIN+FGCVIE +Y +L+I +AT   R+
Sbjct: 61  LHYAMLKGDAFLLITINTFGCVIETIYIILYITYATKENRI 101

[Close]

BLAST of Carg03820 vs. TrEMBL
Match: tr|A0A219UYT3|A0A219UYT3_MANES (Bidirectional sugar transporter SWEET OS=Manihot esculenta OX=3983 GN=SWEET5a PE=2 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.1e-27
Identity = 67/101 (66.34%), Postives = 81/101 (80.20%), Query Frame = 0


Query: 1   MALFHTPHLLVFTFGILGNIVSFFVYLAPLPTFNRIWRKKSTEGFHALPYLVALFSSALW 60
           MA+  T H L FTFGILGNI+S  VYLAP+PTF RI+RKKSTEGF +LPY+VALFSS LW
Sbjct: 1   MAVMDTHHPLAFTFGILGNIISVMVYLAPMPTFLRIYRKKSTEGFQSLPYVVALFSSMLW 60

Query: 61  LFYAFLKTNTFLLVTINSFGCVIEFLYFLLFILFATNPIRV 102
           L YA LK + FLL+TIN+FGCVIE +Y +L+I +AT   R+
Sbjct: 61  LHYAMLKGDAFLLITINTFGCVIETVYIILYITYATKENRI 101

[Close]

BLAST of Carg03820 vs. TrEMBL
Match: tr|B9RM94|B9RM94_RICCO (Bidirectional sugar transporter SWEET OS=Ricinus communis OX=3988 GN=RCOM_1078750 PE=3 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.4e-27
Identity = 67/101 (66.34%), Postives = 81/101 (80.20%), Query Frame = 0


Query: 1   MALFHTPHLLVFTFGILGNIVSFFVYLAPLPTFNRIWRKKSTEGFHALPYLVALFSSALW 60
           MA+  T   L F FGILGNI+S  VYLAP+PTF RI+RKKSTEGF +LPYLVALFSS LW
Sbjct: 1   MAIISTHPPLAFAFGILGNIISILVYLAPVPTFYRIYRKKSTEGFQSLPYLVALFSSMLW 60

Query: 61  LFYAFLKTNTFLLVTINSFGCVIEFLYFLLFILFATNPIRV 102
           L+YA LK + FLLVTIN+FGCVIE +Y +++I++AT   RV
Sbjct: 61  LYYAMLKKDVFLLVTINAFGCVIETIYIIMYIIYATKKNRV 101

The following BLAST results are available for this feature:

BLAST of Carg03820 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022960350.1	1.4e-47	98.02	bidirectional sugar transporter N3-like [Cucurbita moschata]	[more]
XP_023513923.1	1.4e-47	98.02	bidirectional sugar transporter N3-like [Cucurbita pepo subsp. pepo]	[more]
XP_023004306.1	5.4e-47	97.03	bidirectional sugar transporter N3-like [Cucurbita maxima]	[more]
XP_008459891.1	1.2e-41	85.15	PREDICTED: bidirectional sugar transporter N3 [Cucumis melo]	[more]
XP_004140547.1	3.4e-41	84.16	PREDICTED: bidirectional sugar transporter N3 [Cucumis sativus] >KGN46429.1 hypo...	[more]

BLAST of Carg03820 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G48740.1	1.4e-28	56.44	Nodulin MtN3 family protein	[more]
AT5G13170.1	2.0e-27	56.44	senescence-associated gene 29	[more]
AT5G23660.1	4.5e-27	57.43	homolog of Medicago truncatula MTN3	[more]
AT5G50800.1	6.4e-26	59.79	Nodulin MtN3 family protein	[more]
AT4G25010.1	1.0e-23	55.67	Nodulin MtN3 family protein	[more]

BLAST of Carg03820 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P93332\|NOD3_MEDTR	6.6e-28	62.00	Bidirectional sugar transporter N3 OS=Medicago truncatula OX=3880 GN=N3 PE=2 SV=...	[more]
sp\|Q9SMM5\|SWT11_ARATH	2.5e-27	56.44	Bidirectional sugar transporter SWEET11 OS=Arabidopsis thaliana OX=3702 GN=SWEET...	[more]
sp\|Q9FY94\|SWT15_ARATH	3.6e-26	56.44	Bidirectional sugar transporter SWEET15 OS=Arabidopsis thaliana OX=3702 GN=SWEET...	[more]
sp\|O82587\|SWT12_ARATH	8.1e-26	57.43	Bidirectional sugar transporter SWEET12 OS=Arabidopsis thaliana OX=3702 GN=SWEET...	[more]
sp\|P0DKJ5\|SWT15_VITVI	1.1e-25	64.77	Bidirectional sugar transporter SWEET15 OS=Vitis vinifera OX=29760 GN=SWEET15 PE...	[more]

BLAST of Carg03820 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CAR4\|A0A1S3CAR4_CUCME	7.8e-42	85.15	Bidirectional sugar transporter SWEET OS=Cucumis melo OX=3656 GN=LOC103498874 PE...	[more]
tr\|A0A0A0KC70\|A0A0A0KC70_CUCSA	2.3e-41	84.16	Bidirectional sugar transporter SWEET OS=Cucumis sativus OX=3659 GN=Csa_6G092510...	[more]
tr\|A0A2C9UUD2\|A0A2C9UUD2_MANES	8.3e-28	66.34	Bidirectional sugar transporter SWEET OS=Manihot esculenta OX=3983 GN=MANES_12G0...	[more]
tr\|A0A219UYT3\|A0A219UYT3_MANES	1.1e-27	66.34	Bidirectional sugar transporter SWEET OS=Manihot esculenta OX=3983 GN=SWEET5a PE...	[more]
tr\|B9RM94\|B9RM94_RICCO	1.4e-27	66.34	Bidirectional sugar transporter SWEET OS=Ricinus communis OX=3988 GN=RCOM_107875...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR004316	SWEET_sugar_transpr

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg03820-RA	Carg03820-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004316	SWEET sugar transporter	PFAM	PF03083	MtN3_slv	coord: 13..97 e-value: 7.7E-26 score: 89.9
None	No IPR available	GENE3D	G3DSA:1.20.1280.290		coord: 15..104 e-value: 3.0E-15 score: 58.2
None	No IPR available	PANTHER	PTHR10791	RAG1-ACTIVATING PROTEIN 1	coord: 1..101
None	No IPR available	PANTHER	PTHR10791:SF34	BIDIRECTIONAL SUGAR TRANSPORTER SWEET15	coord: 1..101

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg03820	Csa6G092510	Cucumber (Chinese Long) v2	carcuB0995
Carg03820	ClCG06G001880	Watermelon (Charleston Gray)	carwcgB0956
Carg03820	CSPI06G07530	Wild cucumber (PI 183967)	carcpiB1018
Carg03820	Cucsa.349380	Cucumber (Gy14) v1	carcgyB1099
Carg03820	CmaCh17G014190	Cucurbita maxima (Rimu)	carcmaB1351
Carg03820	CmoCh17G013660	Cucurbita moschata (Rifu)	carcmoB1312
Carg03820	Lsi09G017530	Bottle gourd (USVL1VR-Ls)	carlsiB890
Carg03820	CsGy6G007600	Cucumber (Gy14) v2	carcgybB0968
Carg03820	CsaV3_6G007930	Cucumber (Chinese Long) v3	carcucB1024
Carg03820	Cla97C06G111200	Watermelon (97103) v2	carwmbB1032
Carg03820	Bhi12G002144	Wax gourd	carwgoB1141

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg03820	Carg11577	Silver-seed gourd	carcarB014

The following block(s) are covering this gene:


Gene	Organism	Block
Carg03820	Cucurbita maxima (Rimu)	carcmaB1361
Carg03820	Cucurbita moschata (Rifu)	carcmoB1322
Carg03820	Cucurbita pepo (Zucchini)	carcpeB1355
Carg03820	Cucurbita pepo (Zucchini)	carcpeB1359
Carg03820	Melon (DHL92) v3.5.1	carmeB0951
Carg03820	Melon (DHL92) v3.6.1	carmedB0957
Carg03820	Watermelon (97103) v1	carwmB0986