Carg03770 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTCATTTTCTTTTTATAGGAGAATATGGCAACTAGGGGTCAAGGTGGTATCCAACAATTGCTTGCTGCAGAGCAAGAAGCTCAACACATTGTCAATGCTGCCAGAAATGGTAAACTTGCTCTTGGTTTATTTTATTTTGTTATATATGTTTAACATTCATATGCATGTAAAATTTGTTATTTGGTCCATATAGGTTGATTTCCTCGAATTGCATTTAGTTCCATACTTCAGTTCATAATTTGCTTGACATGAGTTTGTGAAGTGTGAAGAAGGATCATTATCATCTCCTCTTTTCCCGTTATTGATCTACTTTTTTCTCATTGCTTTATGAACCTGTTGAAGTTAGACATAATTTATAACTCAACAACTTGATTTTCCTTTTCTTTTAGCAAAATTGGCTAGACTGAAACAGGCCAAAGAAGAGGCTGAAAGGGAAATTGCTGCATATCGAGCCCAAGTCGAGTCTGAATTCCAAAGAAAACTCACTGAGGTTAGTATAGAATTATTATTACAAACACACATTGTCTCTTGTTGTGTAAAAACCATCCTGATATGTTAAAATATCCGCTAACTCTACTCTTGCTTCCCCATCTCATCTTCATCCTTTGATCATACAGAGTAGCGGAGATTCGGGAGCTAACGTTAAGCGGCTCGAAGTCGAGACAGACATAAAGATTCAAAACCTGAAAGAAGAGTCTGCTAGAATTTCACACGATGTTGTGAACATGCTCCTGAAGCATGTGACAACCGTGAAAAATTGAACTTCTTGATCTTAAAAGGTTGCAGTAAGAACCTCTAAATTATGCTATTCTTTTTGTGGTGCCTGGAAACGGCTTAAATTGCATGTGTATTATGGAGATGAAATCCTTTCCTTTGTATGGAATCAGTCAGCATTTTGCAGACTGCACTCTGTTGTTGAATAAAACATAATTTCATTCAATGTTCAGTGCTATGTTTTATC GTCATTTTCTTTTTATAGGAGAATATGGCAACTAGGGGTCAAGGTGGTATCCAACAATTGCTTGCTGCAGAGCAAGAAGCTCAACACATTGTCAATGCTGCCAGAAATGCAAAATTGGCTAGACTGAAACAGGCCAAAGAAGAGGCTGAAAGGGAAATTGCTGCATATCGAGCCCAAGTCGAGTCTGAATTCCAAAGAAAACTCACTGAGAGTAGCGGAGATTCGGGAGCTAACGTTAAGCGGCTCGAAGTCGAGACAGACATAAAGATTCAAAACCTGAAAGAAGAGTCTGCTAGAATTTCACACGATGTTGTGAACATGCTCCTGAAGCATGTGACAACCGTGAAAAATTGAACTTCTTGATCTTAAAAGGTTGCAGTAAGAACCTCTAAATTATGCTATTCTTTTTGTGGTGCCTGGAAACGGCTTAAATTGCATGTGTATTATGGAGATGAAATCCTTTCCTTTGTATGGAATCAGTCAGCATTTTGCAGACTGCACTCTGTTGTTGAATAAAACATAATTTCATTCAATGTTCAGTGCTATGTTTTATC ATGGCAACTAGGGGTCAAGGTGGTATCCAACAATTGCTTGCTGCAGAGCAAGAAGCTCAACACATTGTCAATGCTGCCAGAAATGCAAAATTGGCTAGACTGAAACAGGCCAAAGAAGAGGCTGAAAGGGAAATTGCTGCATATCGAGCCCAAGTCGAGTCTGAATTCCAAAGAAAACTCACTGAGAGTAGCGGAGATTCGGGAGCTAACGTTAAGCGGCTCGAAGTCGAGACAGACATAAAGATTCAAAACCTGAAAGAAGAGTCTGCTAGAATTTCACACGATGTTGTGAACATGCTCCTGAAGCATGTGACAACCGTGAAAAATTGA MATRGQGGIQQLLAAEQEAQHIVNAARNAKLARLKQAKEEAEREIAAYRAQVESEFQRKLTESSGDSGANVKRLEVETDIKIQNLKEESARISHDVVNMLLKHVTTVKN
BLAST of Carg03770 vs. NCBI nr
Match: XP_023528336.1 (V-type proton ATPase subunit G1-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 197.6 bits (501), Expect = 2.2e-47 Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0
BLAST of Carg03770 vs. NCBI nr
Match: XP_023528337.1 (V-type proton ATPase subunit G-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023528338.1 V-type proton ATPase subunit G-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 197.6 bits (501), Expect = 2.2e-47 Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0
BLAST of Carg03770 vs. NCBI nr
Match: XP_022934615.1 (V-type proton ATPase subunit G-like [Cucurbita moschata] >XP_022934616.1 V-type proton ATPase subunit G-like [Cucurbita moschata] >XP_022984083.1 V-type proton ATPase subunit G-like [Cucurbita maxima] >XP_022984085.1 V-type proton ATPase subunit G-like [Cucurbita maxima]) HSP 1 Score: 197.2 bits (500), Expect = 2.9e-47 Identity = 108/109 (99.08%), Postives = 109/109 (100.00%), Query Frame = 0
BLAST of Carg03770 vs. NCBI nr
Match: XP_022960312.1 (probable E3 ubiquitin-protein ligase LUL2 [Cucurbita moschata]) HSP 1 Score: 183.3 bits (464), Expect = 4.3e-43 Identity = 101/109 (92.66%), Postives = 107/109 (98.17%), Query Frame = 0
BLAST of Carg03770 vs. NCBI nr
Match: XP_023539424.1 (V-type proton ATPase subunit G-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 183.3 bits (464), Expect = 4.3e-43 Identity = 101/109 (92.66%), Postives = 107/109 (98.17%), Query Frame = 0
BLAST of Carg03770 vs. TAIR10
Match: AT3G01390.1 (vacuolar membrane ATPase 10) HSP 1 Score: 154.8 bits (390), Expect = 3.0e-38 Identity = 85/108 (78.70%), Postives = 94/108 (87.04%), Query Frame = 0
BLAST of Carg03770 vs. TAIR10
Match: AT4G23710.1 (vacuolar ATP synthase subunit G2) HSP 1 Score: 129.8 bits (325), Expect = 1.0e-30 Identity = 73/102 (71.57%), Postives = 83/102 (81.37%), Query Frame = 0
BLAST of Carg03770 vs. TAIR10
Match: AT4G25950.1 (vacuolar ATP synthase G3) HSP 1 Score: 110.5 bits (275), Expect = 6.4e-25 Identity = 61/103 (59.22%), Postives = 82/103 (79.61%), Query Frame = 0
BLAST of Carg03770 vs. Swiss-Prot
Match: sp|Q9SP55|VATG_CITLI (V-type proton ATPase subunit G OS=Citrus limon OX=2708 GN=VATG PE=3 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 3.1e-37 Identity = 86/108 (79.63%), Postives = 94/108 (87.04%), Query Frame = 0
BLAST of Carg03770 vs. Swiss-Prot
Match: sp|O82628|VATG1_ARATH (V-type proton ATPase subunit G1 OS=Arabidopsis thaliana OX=3702 GN=VHA-G1 PE=1 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 5.4e-37 Identity = 85/108 (78.70%), Postives = 94/108 (87.04%), Query Frame = 0
BLAST of Carg03770 vs. Swiss-Prot
Match: sp|O82702|VATG1_TOBAC (V-type proton ATPase subunit G 1 OS=Nicotiana tabacum OX=4097 GN=VATG1 PE=3 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 7.2e-34 Identity = 80/108 (74.07%), Postives = 93/108 (86.11%), Query Frame = 0
BLAST of Carg03770 vs. Swiss-Prot
Match: sp|O82703|VATG2_TOBAC (V-type proton ATPase subunit G 2 OS=Nicotiana tabacum OX=4097 GN=VATG2 PE=3 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 1.3e-30 Identity = 75/104 (72.12%), Postives = 86/104 (82.69%), Query Frame = 0
BLAST of Carg03770 vs. Swiss-Prot
Match: sp|O82629|VATG2_ARATH (V-type proton ATPase subunit G2 OS=Arabidopsis thaliana OX=3702 GN=VHA-G2 PE=1 SV=2) HSP 1 Score: 129.8 bits (325), Expect = 1.8e-29 Identity = 73/102 (71.57%), Postives = 83/102 (81.37%), Query Frame = 0
BLAST of Carg03770 vs. TrEMBL
Match: tr|A0A1S3B690|A0A1S3B690_CUCME (V-type proton ATPase subunit G OS=Cucumis melo OX=3656 GN=LOC103486476 PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 8.3e-43 Identity = 100/109 (91.74%), Postives = 105/109 (96.33%), Query Frame = 0
BLAST of Carg03770 vs. TrEMBL
Match: tr|A0A0A0LFS1|A0A0A0LFS1_CUCSA (V-type proton ATPase subunit G OS=Cucumis sativus OX=3659 GN=Csa_3G739020 PE=3 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 9.1e-42 Identity = 99/109 (90.83%), Postives = 104/109 (95.41%), Query Frame = 0
BLAST of Carg03770 vs. TrEMBL
Match: tr|B3U2B1|B3U2B1_CUCSA (Zinc finger RING-type protein OS=Cucumis sativus OX=3659 PE=4 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 5.5e-39 Identity = 94/103 (91.26%), Postives = 98/103 (95.15%), Query Frame = 0
BLAST of Carg03770 vs. TrEMBL
Match: tr|A0A1R3HQE5|A0A1R3HQE5_COCAP (Vacuolar (H+)-ATPase G subunit OS=Corchorus capsularis OX=210143 GN=CCACVL1_17748 PE=4 SV=1) HSP 1 Score: 168.7 bits (426), Expect = 7.2e-39 Identity = 92/108 (85.19%), Postives = 100/108 (92.59%), Query Frame = 0
BLAST of Carg03770 vs. TrEMBL
Match: tr|A0A1R3KD43|A0A1R3KD43_COCAP (V-type proton ATPase subunit G OS=Corchorus capsularis OX=210143 GN=CCACVL1_02076 PE=3 SV=1) HSP 1 Score: 166.8 bits (421), Expect = 2.8e-38 Identity = 90/108 (83.33%), Postives = 100/108 (92.59%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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