Carg03759 (gene) Silver-seed gourd

Overview
NameCarg03759
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionTSL-kinase interacting 1-like protein
LocationCucurbita_argyrosperma_scaffold_006 : 1739628 .. 1741739 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTGTTCTTTCACATCCTCAACTGTAGACGGCTGTCGGAAAATTTTCTCCGGTTCTCATCGTTTTCGTCTAATATTCGAAGCTTTTTGGCGTTACAGATTGTTCGATTTCTCGAATCTTTCTCAGGTATTGTCAGTTTTGTGTACAATTTCGTCTCGTTTGTTGATTTTCTGGAGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCAGTTGACCATGGGTGCAGTTCGAAACCCTAAATCATCTCTGGGGACCTAAAATGGAGCGGAGATTATTAGAATCTTTATTTCCAATTGTCTGTTAGGAATTTGGTTTAGAGGAATTTTAACGCAATTTGATTAATTAGATGTCTCATGCAAGGTTTAGGTGAGTGATCGTTATTCGGATTTAATTTCGGGTGAAGCGATTTGAATCAGTTGACAATTCTCAGCCGCCTGGAAATAATGAGTTTCTATCCGAAGTTCGGTTATTTACTCAATTTTAGTATGTGAGTTATAAGTTCATTTGGGGTAGGTATTTGATTGAATTACTGCAATTAGGTTTTGTTAGCATTTTTGTGCGACAGGATTTTGGATAAATAGGGATGCTTGCTAAGGCTATATATGAGTAATCATGAGTTCTGTTCTACTTAATTGGTCCAGTTTATTCTATTTGATGATCTATGAATTGATGAACGCAAGAAACTACTCTGTATGTTCTACTTTTGTTCTTAATTATTGGGAGCGTGAAGCCCTGTAGAAAACTCTACCGTTGTTAACACTTTTGGGGGCTTCTCCTGATGCTTATAAATGATTAGATTGGATAAAGACATTCTATTTATGAGTGCCATTCTTTCTCGAATATCTGATTCCTCTTGACTTTGAAACGATTACCCAATGTTGCAGTTGGTTTCTGATGCTTAGGAGCATCATCCGGAAGTCGATGAAGGACAAGAGTAAATAAGTTCATTAAAAAATATAAAATGCAGACAGATTTAATTGTCTCCTCCAACTCTGAGACACATCTTCATTCAGAGACTTTCGTTGCCCATGTTGGAGATCAAGGCATTGCAGCATCAACTCCCGATCATGTTATAGAACCACTGCCTGGTACTTTCTTGACGTTTTCTTTTACATTCTAAATCTGACAAATTTCCTGCCTCTAATTATTCTTTATTGGTTCATGCAGCCAAAAGGCCTACTCGACAATGGGCTGCTTGGACACGTGAAGAGGAGGAAAGTTTCTTCACTGCATTACGGCAAGTTGGCAAGGCATGTAGATGTCGCCTTACTTTGCATATTTGTTACTATGGATGCCTCCTGACTGCTTCATATTTTCTGTGCAGAATTTTGAAAAGATCACTTGTCATGTCCAAAGCAAAAACAAGGACCAGGTGCTTGTTATAGACGGTCTTCTGTTGGAAAGTTAATCCTTGGACTTGTACTCTAATCCCTTCTTGTGTATATATATTCTTCAATTTTTTTTCAACAGGTCAGACATTATTATTACCGTCTAGTAAGGCGTATGAATAAGCTGTTGGCTCCTGGGTTATGTCTGGATGCAAAAAACTCTAAGGATACTAATGCTGCAATGCTTCGATGGTAACAATTATTACTAGTTCTTCTGTTGCCATTCCTTCAATCTTACCTATGCTTTCCAAATGTGGGTGGTTATTTTCATTTGATTGATTGCTGGGTTTATGTGTGAAAAGTTATGAACATTAGTTTGGATTCTGCCATAAAGTCATATGACATCATTGTTGAGAATGTTGGCCTTTTTGCATCTGGAGAAGTCAGACTGATACTTGAGGGAATTTGTTATTTCTGTGTTAATTTAACGAGTTGTTATAATTTTCATTGTTCAGTCTAACTACTTTACATATAATATAAGAAAGCTATCTATTTTGAGAAAAATAGTATAACATGGATGTGATTTTTCTCACTATATTTGGCATGTCCAACAGGTGGTCGTTACTGGAAAAATATAGTTGTAAAGCTTCAAAACTTCACCTGAAACCACGGCGTTTCAAGATTTTTGTTGAAGCCTTGGTTAGTCAGAACTATCTAATCCATCCCATCCTTTGGTGCCTTTCTATGATTGAAACTCTTCTTCTTCATGTGCTGATGAACTGA

mRNA sequence

TTTGTTCTTTCACATCCTCAACTGTAGACGGCTGTCGGAAAATTTTCTCCGGTTCTCATCGTTTTCGTCTAATATTCGAAGCTTTTTGGCGTTACAGATTGTTCGATTTCTCGAATCTTTCTCAGTTGGTTTCTGATGCTTAGGAGCATCATCCGGAAGTCGATGAAGGACAAGAGTAAATAAGTTCATTAAAAAATATAAAATGCAGACAGATTTAATTGTCTCCTCCAACTCTGAGACACATCTTCATTCAGAGACTTTCGTTGCCCATGTTGGAGATCAAGGCATTGCAGCATCAACTCCCGATCATGTTATAGAACCACTGCCTGCCAAAAGGCCTACTCGACAATGGGCTGCTTGGACACGTGAAGAGGAGGAAAGTTTCTTCACTGCATTACGGCAAAATTTTGAAAAGATCACTTGTCATGTCCAAAGCAAAAACAAGGACCAGGTCAGACATTATTATTACCGTCTAGTAAGGCGTATGAATAAGCTGTTGGCTCCTGGGTTATGTCTGGATGCAAAAAACTCTAAGGATACTAATGCTGCAATGCTTCGATGGTGGTCGTTACTGGAAAAATATAGTTGTAAAGCTTCAAAACTTCACCTGAAACCACGGCGTTTCAAGATTTTTGTTGAAGCCTTGGTTAGTCAGAACTATCTAATCCATCCCATCCTTTGGTGCCTTTCTATGATTGAAACTCTTCTTCTTCATGTGCTGATGAACTGA

Coding sequence (CDS)

ATGCAGACAGATTTAATTGTCTCCTCCAACTCTGAGACACATCTTCATTCAGAGACTTTCGTTGCCCATGTTGGAGATCAAGGCATTGCAGCATCAACTCCCGATCATGTTATAGAACCACTGCCTGCCAAAAGGCCTACTCGACAATGGGCTGCTTGGACACGTGAAGAGGAGGAAAGTTTCTTCACTGCATTACGGCAAAATTTTGAAAAGATCACTTGTCATGTCCAAAGCAAAAACAAGGACCAGGTCAGACATTATTATTACCGTCTAGTAAGGCGTATGAATAAGCTGTTGGCTCCTGGGTTATGTCTGGATGCAAAAAACTCTAAGGATACTAATGCTGCAATGCTTCGATGGTGGTCGTTACTGGAAAAATATAGTTGTAAAGCTTCAAAACTTCACCTGAAACCACGGCGTTTCAAGATTTTTGTTGAAGCCTTGGTTAGTCAGAACTATCTAATCCATCCCATCCTTTGGTGCCTTTCTATGATTGAAACTCTTCTTCTTCATGTGCTGATGAACTGA

Protein sequence

MQTDLIVSSNSETHLHSETFVAHVGDQGIAASTPDHVIEPLPAKRPTRQWAAWTREEEESFFTALRQNFEKITCHVQSKNKDQVRHYYYRLVRRMNKLLAPGLCLDAKNSKDTNAAMLRWWSLLEKYSCKASKLHLKPRRFKIFVEALVSQNYLIHPILWCLSMIETLLLHVLMN
Homology
[Close]
BLAST of Carg03759 vs. NCBI nr
Match: XP_008442695.1 (PREDICTED: TSL-kinase interacting protein 1 isoform X1 [Cucumis melo] >XP_008442696.1 PREDICTED: TSL-kinase interacting protein 1 isoform X1 [Cucumis melo] >XP_008442697.1 PREDICTED: TSL-kinase interacting protein 1 isoform X1 [Cucumis melo] >XP_016899753.1 PREDICTED: TSL-kinase interacting protein 1 isoform X1 [Cucumis melo])

HSP 1 Score: 297.0 bits (759), Expect = 4.3e-77
Identity = 146/154 (94.81%), Postives = 148/154 (96.10%), Query Frame = 0 

Query: 1   MQTDLIVSSNSETHLHSETFVAHVGDQGIAASTPDHVIEPLPAKRPTRQWAAWTREEEES 60
           MQTDLIVSSNSETHLHSET +AHVGDQGIAASTPDHVIEPLPAK+PTRQWAAWTREEEES
Sbjct: 1   MQTDLIVSSNSETHLHSETIIAHVGDQGIAASTPDHVIEPLPAKKPTRQWAAWTREEEES 60

Query: 61  FFTALRQ---NFEKITCHVQSKNKDQVRHYYYRLVRRMNKLLAPGLCLDAKNSKDTNAAM 120
           FFTALRQ   NFEKITCHVQSKNKDQVRHYYYRLVRRMNKLLAPGLCLDAKNSKDTNAAM
Sbjct: 61  FFTALRQVGKNFEKITCHVQSKNKDQVRHYYYRLVRRMNKLLAPGLCLDAKNSKDTNAAM 120

Query: 121 LRWWSLLEKYSCKASKLHLKPRRFKIFVEALVSQ 152
           LRWWSLLEKYSCKASKLHLKPRRFKIFVEAL  Q
Sbjct: 121 LRWWSLLEKYSCKASKLHLKPRRFKIFVEALEHQ 154

[Close]
BLAST of Carg03759 vs. NCBI nr
Match: XP_008442698.1 (PREDICTED: TSL-kinase interacting protein 1 isoform X2 [Cucumis melo])

HSP 1 Score: 297.0 bits (759), Expect = 4.3e-77
Identity = 146/154 (94.81%), Postives = 148/154 (96.10%), Query Frame = 0 

Query: 1   MQTDLIVSSNSETHLHSETFVAHVGDQGIAASTPDHVIEPLPAKRPTRQWAAWTREEEES 60
           MQTDLIVSSNSETHLHSET +AHVGDQGIAASTPDHVIEPLPAK+PTRQWAAWTREEEES
Sbjct: 1   MQTDLIVSSNSETHLHSETIIAHVGDQGIAASTPDHVIEPLPAKKPTRQWAAWTREEEES 60

Query: 61  FFTALRQ---NFEKITCHVQSKNKDQVRHYYYRLVRRMNKLLAPGLCLDAKNSKDTNAAM 120
           FFTALRQ   NFEKITCHVQSKNKDQVRHYYYRLVRRMNKLLAPGLCLDAKNSKDTNAAM
Sbjct: 61  FFTALRQVGKNFEKITCHVQSKNKDQVRHYYYRLVRRMNKLLAPGLCLDAKNSKDTNAAM 120

Query: 121 LRWWSLLEKYSCKASKLHLKPRRFKIFVEALVSQ 152
           LRWWSLLEKYSCKASKLHLKPRRFKIFVEAL  Q
Sbjct: 121 LRWWSLLEKYSCKASKLHLKPRRFKIFVEALEHQ 154

[Close]
BLAST of Carg03759 vs. NCBI nr
Match: XP_022982849.1 (TSL-kinase interacting protein 1-like isoform X3 [Cucurbita maxima])

HSP 1 Score: 295.8 bits (756), Expect = 9.5e-77
Identity = 146/151 (96.69%), Postives = 147/151 (97.35%), Query Frame = 0 

Query: 1   MQTDLIVSSNSETHLHSETFVAHVGDQGIAASTPDHVIEPLPAKRPTRQWAAWTREEEES 60
           MQTDLIV+SNSETHLHSETFVAHVGDQGIAASTPDHVIEP PAKRPTRQWAAWTREEEES
Sbjct: 1   MQTDLIVASNSETHLHSETFVAHVGDQGIAASTPDHVIEPPPAKRPTRQWAAWTREEEES 60

Query: 61  FFTALRQ---NFEKITCHVQSKNKDQVRHYYYRLVRRMNKLLAPGLCLDAKNSKDTNAAM 120
           FFTALRQ   NFEKITCHVQSKNKDQVRHYYYRLVRRMNKLLAPGLCLDAKNSKDTNAAM
Sbjct: 61  FFTALRQVGKNFEKITCHVQSKNKDQVRHYYYRLVRRMNKLLAPGLCLDAKNSKDTNAAM 120

Query: 121 LRWWSLLEKYSCKASKLHLKPRRFKIFVEAL 149
           LRWWSLLEKYSCKASKLHLKPRRFKIFVEAL
Sbjct: 121 LRWWSLLEKYSCKASKLHLKPRRFKIFVEAL 151

[Close]
BLAST of Carg03759 vs. NCBI nr
Match: XP_022982848.1 (TSL-kinase interacting protein 1-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 295.8 bits (756), Expect = 9.5e-77
Identity = 146/151 (96.69%), Postives = 147/151 (97.35%), Query Frame = 0 

Query: 1   MQTDLIVSSNSETHLHSETFVAHVGDQGIAASTPDHVIEPLPAKRPTRQWAAWTREEEES 60
           MQTDLIV+SNSETHLHSETFVAHVGDQGIAASTPDHVIEP PAKRPTRQWAAWTREEEES
Sbjct: 1   MQTDLIVASNSETHLHSETFVAHVGDQGIAASTPDHVIEPPPAKRPTRQWAAWTREEEES 60

Query: 61  FFTALRQ---NFEKITCHVQSKNKDQVRHYYYRLVRRMNKLLAPGLCLDAKNSKDTNAAM 120
           FFTALRQ   NFEKITCHVQSKNKDQVRHYYYRLVRRMNKLLAPGLCLDAKNSKDTNAAM
Sbjct: 61  FFTALRQVGKNFEKITCHVQSKNKDQVRHYYYRLVRRMNKLLAPGLCLDAKNSKDTNAAM 120

Query: 121 LRWWSLLEKYSCKASKLHLKPRRFKIFVEAL 149
           LRWWSLLEKYSCKASKLHLKPRRFKIFVEAL
Sbjct: 121 LRWWSLLEKYSCKASKLHLKPRRFKIFVEAL 151

[Close]
BLAST of Carg03759 vs. NCBI nr
Match: XP_022982847.1 (TSL-kinase interacting protein 1-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 295.8 bits (756), Expect = 9.5e-77
Identity = 146/151 (96.69%), Postives = 147/151 (97.35%), Query Frame = 0 

Query: 1   MQTDLIVSSNSETHLHSETFVAHVGDQGIAASTPDHVIEPLPAKRPTRQWAAWTREEEES 60
           MQTDLIV+SNSETHLHSETFVAHVGDQGIAASTPDHVIEP PAKRPTRQWAAWTREEEES
Sbjct: 1   MQTDLIVASNSETHLHSETFVAHVGDQGIAASTPDHVIEPPPAKRPTRQWAAWTREEEES 60

Query: 61  FFTALRQ---NFEKITCHVQSKNKDQVRHYYYRLVRRMNKLLAPGLCLDAKNSKDTNAAM 120
           FFTALRQ   NFEKITCHVQSKNKDQVRHYYYRLVRRMNKLLAPGLCLDAKNSKDTNAAM
Sbjct: 61  FFTALRQVGKNFEKITCHVQSKNKDQVRHYYYRLVRRMNKLLAPGLCLDAKNSKDTNAAM 120

Query: 121 LRWWSLLEKYSCKASKLHLKPRRFKIFVEAL 149
           LRWWSLLEKYSCKASKLHLKPRRFKIFVEAL
Sbjct: 121 LRWWSLLEKYSCKASKLHLKPRRFKIFVEAL 151

[Close]
BLAST of Carg03759 vs. TAIR10
Match: AT2G36960.3 (TSL-kinase interacting protein 1)

HSP 1 Score: 198.7 bits (504), Expect = 2.9e-51
Identity = 98/117 (83.76%), Postives = 102/117 (87.18%), Query Frame = 0 

Query: 38  IEPLPAKRPTRQWAAWTREEEESFFTALRQ---NFEKITCHVQSKNKDQVRHYYYRLVRR 97
           I   PAK+PTRQWAAWT +EEESFFTALRQ   NFEKIT  VQSKNKDQVRHYYYRLVRR
Sbjct: 43  ITQFPAKKPTRQWAAWTHQEEESFFTALRQVGKNFEKITSRVQSKNKDQVRHYYYRLVRR 102

Query: 98  MNKLLAPGLCLDAKNSKDTNAAMLRWWSLLEKYSCKASKLHLKPRRFKIFVEALVSQ 152
           MNKLL P L LDAKN KDTNAAMLRWWSLLEKYSCKASKLHLKPRRFK+F+EAL  Q
Sbjct: 103 MNKLLGPDLSLDAKNPKDTNAAMLRWWSLLEKYSCKASKLHLKPRRFKLFIEALEHQ 159

[Close]
BLAST of Carg03759 vs. Swiss-Prot
Match: sp|Q8LJT8|TKI1_ARATH (TSL-kinase interacting protein 1 OS=Arabidopsis thaliana OX=3702 GN=TKI1 PE=1 SV=2)

HSP 1 Score: 198.7 bits (504), Expect = 5.2e-50
Identity = 98/117 (83.76%), Postives = 102/117 (87.18%), Query Frame = 0 

Query: 38  IEPLPAKRPTRQWAAWTREEEESFFTALRQ---NFEKITCHVQSKNKDQVRHYYYRLVRR 97
           I   PAK+PTRQWAAWT +EEESFFTALRQ   NFEKIT  VQSKNKDQVRHYYYRLVRR
Sbjct: 43  ITQFPAKKPTRQWAAWTHQEEESFFTALRQVGKNFEKITSRVQSKNKDQVRHYYYRLVRR 102

Query: 98  MNKLLAPGLCLDAKNSKDTNAAMLRWWSLLEKYSCKASKLHLKPRRFKIFVEALVSQ 152
           MNKLL P L LDAKN KDTNAAMLRWWSLLEKYSCKASKLHLKPRRFK+F+EAL  Q
Sbjct: 103 MNKLLGPDLSLDAKNPKDTNAAMLRWWSLLEKYSCKASKLHLKPRRFKLFIEALEHQ 159

[Close]
BLAST of Carg03759 vs. TrEMBL
Match: tr|A0A1S4DUV7|A0A1S4DUV7_CUCME (TSL-kinase interacting protein 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486493 PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 2.8e-77
Identity = 146/154 (94.81%), Postives = 148/154 (96.10%), Query Frame = 0 

Query: 1   MQTDLIVSSNSETHLHSETFVAHVGDQGIAASTPDHVIEPLPAKRPTRQWAAWTREEEES 60
           MQTDLIVSSNSETHLHSET +AHVGDQGIAASTPDHVIEPLPAK+PTRQWAAWTREEEES
Sbjct: 1   MQTDLIVSSNSETHLHSETIIAHVGDQGIAASTPDHVIEPLPAKKPTRQWAAWTREEEES 60

Query: 61  FFTALRQ---NFEKITCHVQSKNKDQVRHYYYRLVRRMNKLLAPGLCLDAKNSKDTNAAM 120
           FFTALRQ   NFEKITCHVQSKNKDQVRHYYYRLVRRMNKLLAPGLCLDAKNSKDTNAAM
Sbjct: 61  FFTALRQVGKNFEKITCHVQSKNKDQVRHYYYRLVRRMNKLLAPGLCLDAKNSKDTNAAM 120

Query: 121 LRWWSLLEKYSCKASKLHLKPRRFKIFVEALVSQ 152
           LRWWSLLEKYSCKASKLHLKPRRFKIFVEAL  Q
Sbjct: 121 LRWWSLLEKYSCKASKLHLKPRRFKIFVEALEHQ 154

[Close]
BLAST of Carg03759 vs. TrEMBL
Match: tr|A0A1S3B6B7|A0A1S3B6B7_CUCME (TSL-kinase interacting protein 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486493 PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 2.8e-77
Identity = 146/154 (94.81%), Postives = 148/154 (96.10%), Query Frame = 0 

Query: 1   MQTDLIVSSNSETHLHSETFVAHVGDQGIAASTPDHVIEPLPAKRPTRQWAAWTREEEES 60
           MQTDLIVSSNSETHLHSET +AHVGDQGIAASTPDHVIEPLPAK+PTRQWAAWTREEEES
Sbjct: 1   MQTDLIVSSNSETHLHSETIIAHVGDQGIAASTPDHVIEPLPAKKPTRQWAAWTREEEES 60

Query: 61  FFTALRQ---NFEKITCHVQSKNKDQVRHYYYRLVRRMNKLLAPGLCLDAKNSKDTNAAM 120
           FFTALRQ   NFEKITCHVQSKNKDQVRHYYYRLVRRMNKLLAPGLCLDAKNSKDTNAAM
Sbjct: 61  FFTALRQVGKNFEKITCHVQSKNKDQVRHYYYRLVRRMNKLLAPGLCLDAKNSKDTNAAM 120

Query: 121 LRWWSLLEKYSCKASKLHLKPRRFKIFVEALVSQ 152
           LRWWSLLEKYSCKASKLHLKPRRFKIFVEAL  Q
Sbjct: 121 LRWWSLLEKYSCKASKLHLKPRRFKIFVEALEHQ 154

[Close]
BLAST of Carg03759 vs. TrEMBL
Match: tr|A0A0A0LE12|A0A0A0LE12_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G740150 PE=4 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 1.1e-76
Identity = 146/154 (94.81%), Postives = 147/154 (95.45%), Query Frame = 0 

Query: 1   MQTDLIVSSNSETHLHSETFVAHVGDQGIAASTPDHVIEPLPAKRPTRQWAAWTREEEES 60
           MQTDLIVSSNSETHL SET +AHVGDQGIAASTPDHVIEPLPAKRPTRQWAAWTREEEES
Sbjct: 1   MQTDLIVSSNSETHLQSETIIAHVGDQGIAASTPDHVIEPLPAKRPTRQWAAWTREEEES 60

Query: 61  FFTALRQ---NFEKITCHVQSKNKDQVRHYYYRLVRRMNKLLAPGLCLDAKNSKDTNAAM 120
           FFTALRQ   NFEKITCHVQSKNKDQVRHYYYRLVRRMNKLLAPGLCLDAKNSKDTNAAM
Sbjct: 61  FFTALRQVGKNFEKITCHVQSKNKDQVRHYYYRLVRRMNKLLAPGLCLDAKNSKDTNAAM 120

Query: 121 LRWWSLLEKYSCKASKLHLKPRRFKIFVEALVSQ 152
           LRWWSLLEKYSCKASKLHLKPRRFKIFVEAL  Q
Sbjct: 121 LRWWSLLEKYSCKASKLHLKPRRFKIFVEALEHQ 154

[Close]
BLAST of Carg03759 vs. TrEMBL
Match: tr|A0A059DF81|A0A059DF81_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_A01690 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 5.4e-60
Identity = 120/154 (77.92%), Postives = 129/154 (83.77%), Query Frame = 0 

Query: 1   MQTDLIVSSNSETHLHSETFVAHVGDQGIAASTPDHVIEPLPAKRPTRQWAAWTREEEES 60
           MQ+++ +  NSET+ H E+ V   G  G+ AST D V+   PAKRPTRQWAAWTR+EEES
Sbjct: 1   MQSEVQIPLNSETNPHPESHVTQDGGAGLTASTMDPVLTQQPAKRPTRQWAAWTRQEEES 60

Query: 61  FFTALRQ---NFEKITCHVQSKNKDQVRHYYYRLVRRMNKLLAPGLCLDAKNSKDTNAAM 120
           FF ALRQ   NFEKITC VQSKNKDQVRHYYYRLVRRMNKLL PGLCLDAKNSKDTNAAM
Sbjct: 61  FFAALRQVGKNFEKITCRVQSKNKDQVRHYYYRLVRRMNKLLGPGLCLDAKNSKDTNAAM 120

Query: 121 LRWWSLLEKYSCKASKLHLKPRRFKIFVEALVSQ 152
           LRWWSLLEKYSCKASKLHLKPRRFKIFVEAL  Q
Sbjct: 121 LRWWSLLEKYSCKASKLHLKPRRFKIFVEALEHQ 154

[Close]
BLAST of Carg03759 vs. TrEMBL
Match: tr|A0A061EU00|A0A061EU00_THECC (TSL-kinase interacting protein 1, putative isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_022207 PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 1.2e-59
Identity = 118/154 (76.62%), Postives = 129/154 (83.77%), Query Frame = 0 

Query: 1   MQTDLIVSSNSETHLHSETFVAHVGDQGIAASTPDHVIEPLPAKRPTRQWAAWTREEEES 60
           MQT+  VS  SE + H E     +GD  +A+STP++ +   PAK+PTRQWAAWTR+EEES
Sbjct: 1   MQTESQVSLASEANCHQEHIPIQIGDPCVASSTPNNAVPEQPAKKPTRQWAAWTRQEEES 60

Query: 61  FFTALRQ---NFEKITCHVQSKNKDQVRHYYYRLVRRMNKLLAPGLCLDAKNSKDTNAAM 120
           FFTALRQ   NFEKITC VQSKNKDQVRHYYYRLVRRMNKLL PGLCLDAKNSKDTNAAM
Sbjct: 61  FFTALRQVGKNFEKITCRVQSKNKDQVRHYYYRLVRRMNKLLGPGLCLDAKNSKDTNAAM 120

Query: 121 LRWWSLLEKYSCKASKLHLKPRRFKIFVEALVSQ 152
           LRWWSLLEKYSC+ASKLHLKPRRFKIFVEAL  Q
Sbjct: 121 LRWWSLLEKYSCRASKLHLKPRRFKIFVEALEHQ 154

The following BLAST results are available for this feature:
BLAST of Carg03759 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008442695.14.3e-7794.81PREDICTED: TSL-kinase interacting protein 1 isoform X1 [Cucumis melo] >XP_008442... [more]
XP_008442698.14.3e-7794.81PREDICTED: TSL-kinase interacting protein 1 isoform X2 [Cucumis melo][more]
XP_022982849.19.5e-7796.69TSL-kinase interacting protein 1-like isoform X3 [Cucurbita maxima][more]
XP_022982848.19.5e-7796.69TSL-kinase interacting protein 1-like isoform X2 [Cucurbita maxima][more]
XP_022982847.19.5e-7796.69TSL-kinase interacting protein 1-like isoform X1 [Cucurbita maxima][more]
BLAST of Carg03759 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G36960.32.9e-5183.76TSL-kinase interacting protein 1[more]
BLAST of Carg03759 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q8LJT8|TKI1_ARATH5.2e-5083.76TSL-kinase interacting protein 1 OS=Arabidopsis thaliana OX=3702 GN=TKI1 PE=1 SV... [more]
BLAST of Carg03759 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S4DUV7|A0A1S4DUV7_CUCME2.8e-7794.81TSL-kinase interacting protein 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486... [more]
tr|A0A1S3B6B7|A0A1S3B6B7_CUCME2.8e-7794.81TSL-kinase interacting protein 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486... [more]
tr|A0A0A0LE12|A0A0A0LE12_CUCSA1.1e-7694.81Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G740150 PE=4 SV=1[more]
tr|A0A059DF81|A0A059DF81_EUCGR5.4e-6077.92Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_A01690 PE=4 SV... [more]
tr|A0A061EU00|A0A061EU00_THECC1.2e-5976.62TSL-kinase interacting protein 1, putative isoform 1 OS=Theobroma cacao OX=3641 ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR009057Homeobox-like_sf
IPR001005SANT/Myb
IPR017884SANT_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg03759-RACarg03759-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:1.20.58.1880coord: 14..99
e-value: 1.5E-7
score: 33.6
NoneNo IPR availablePANTHERPTHR21677:SF1PROTEIN CRAMPED-LIKEcoord: 35..151
NoneNo IPR availablePANTHERPTHR21677CRAMPED PROTEINcoord: 35..151
IPR017884SANT domainPROSITEPS51293SANTcoord: 48..96
score: 9.072
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 52..92
e-value: 3.00241E-4
score: 35.629
IPR009057Homeobox-like domain superfamilySUPERFAMILYSSF46689Homeodomain-likecoord: 44..96

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg03759Cla017807Watermelon (97103) v1carwmB0237
Carg03759Csa3G740150Cucumber (Chinese Long) v2carcuB0277
Carg03759MELO3C009350Melon (DHL92) v3.5.1carmeB0251
Carg03759ClCG10G020190Watermelon (Charleston Gray)carwcgB0240
Carg03759CSPI03G33320Wild cucumber (PI 183967)carcpiB0281
Carg03759Cucsa.306790Cucumber (Gy14) v1carcgyB0295
Carg03759CmaCh06G003880Cucurbita maxima (Rimu)carcmaB0350
Carg03759CmaCh14G002190Cucurbita maxima (Rimu)carcmaB0343
Carg03759CmoCh06G003820Cucurbita moschata (Rifu)carcmoB0351
Carg03759CmoCh14G002100Cucurbita moschata (Rifu)carcmoB0347
Carg03759Cp4.1LG03g01630Cucurbita pepo (Zucchini)carcpeB0353
Carg03759Cp4.1LG08g10830Cucurbita pepo (Zucchini)carcpeB0354
Carg03759MELO3C009350.2Melon (DHL92) v3.6.1carmedB0261
Carg03759CsaV3_3G035910Cucumber (Chinese Long) v3carcucB0279
Carg03759Cla97C10G203320Watermelon (97103) v2carwmbB0254
Carg03759Bhi11G001769Wax gourdcarwgoB0316
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg03759Carg00971Silver-seed gourdcarcarB180
The following block(s) are covering this gene:
GeneOrganismBlock
Carg03759Wax gourdcarwgoB0326
Carg03759Wax gourdcarwgoB0329
Carg03759Silver-seed gourdcarcarB276
Carg03759Silver-seed gourdcarcarB287
Carg03759Cucumber (Gy14) v2carcgybB0263
Carg03759Cucumber (Gy14) v2carcgybB0264
Carg03759Cucumber (Gy14) v1carcgyB0292
Carg03759Cucurbita maxima (Rimu)carcmaB0348
Carg03759Cucurbita maxima (Rimu)carcmaB0351
Carg03759Cucurbita moschata (Rifu)carcmoB0349
Carg03759Cucurbita moschata (Rifu)carcmoB0352
Carg03759Cucurbita pepo (Zucchini)carcpeB0348
Carg03759Cucurbita pepo (Zucchini)carcpeB0351
Carg03759Wild cucumber (PI 183967)carcpiB0282
Carg03759Cucumber (Chinese Long) v2carcuB0278
Carg03759Cucumber (Chinese Long) v3carcucB0280
Carg03759Bottle gourd (USVL1VR-Ls)carlsiB222
Carg03759Bottle gourd (USVL1VR-Ls)carlsiB223
Carg03759Bottle gourd (USVL1VR-Ls)carlsiB225
Carg03759Melon (DHL92) v3.5.1carmeB0253
Carg03759Melon (DHL92) v3.6.1carmedB0263
Carg03759Watermelon (Charleston Gray)carwcgB0241
Carg03759Watermelon (Charleston Gray)carwcgB0242
Carg03759Watermelon (97103) v1carwmB0238
Carg03759Watermelon (97103) v1carwmB0239
Carg03759Watermelon (97103) v2carwmbB0255
Carg03759Watermelon (97103) v2carwmbB0256
Carg03759Watermelon (97103) v2carwmbB0257