Carg03653 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg03653
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	embryo defective 2735
Location	Cucurbita_argyrosperma_scaffold_006 : 1211797 .. 1215490 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATTAATTAAAAAAATTAAATACATTAAGTTAAACTTTACAATATAATAAAATTTATCGAGTAAAATAATAAAAACTTCTAAAATTTAAATAATTATAAACAACATTTTATTGATGCTTTAAAAAAAATAAAAGAATTAATATTCACTTCAAATTCTGATCAAATATCACACAAAATTGGATTATGGGCTTCGCTATTGACGGTTAACCGTCCAGCCCAAACTAAACCTAACCAGTGTTTTAGGTCCAATTTTTAGGGCCCGGCCCATCTGTCTTAGGATGAGAGTGAGCCGTTCGATCAGGTTAACTGAGGATCGTTTCCTCGCGCTCCGGAATTACCATTTCCCTCTTTTTCTCTGAATGACGTTTCGAGCCAATTTCTTGTTGGAACACAAGCTTGGAGCAGCAAATGCATGGAATGGTGAAATATAAGTCAGCTAATCTGTAGCAGGAATGAAGGCGAGGATCGTTTTAAGGAAGATTTATGACTACGTTCGGTATGATTTGAAGGAAATTGCATTTCCTTCGTCGTTGCCGGATCCTCCGCATTCAAAGAAGCGTCGAAAGCTTACATGGCGTGAACGATTCTTGGTAAACTATTATTCGTTGACGTTCTCGTTTTCTCTTGTTGGCTTTGCAGTTGTTCTACTCTCTCTTGCAAGTATTTAGGTACGGATTGATAAGTCCTAATCTGTGATTGAGAGGAAAAGATACTTGCTAGTGCTACGGGATTGACTGAAGTACTGTTCACTCGATTTCTAATCGAATCTATGATTATTATTTAACTGGTCATTGAAATTCGATTTTACTAAGCTCTTATTCTAAGTATGCTCGTATGTTGATTTTAGGTGTTGAAGGAGGCTTCCAGGTTATATGCTGCTAGCTGGGTGCGGGACATTGGTCCTGAACTGCGACCAAATGACTATAAGATGGAAGAAAGCGAAAACAAAAAGAATTCAGCAAAAAGTGCCCCTAAGGAGAAAGAACCTTCAACACTGGAAGATCTGGGTAACCAACCTTTGTGTTATAGTTTGATTCAGATGCTTTATACTGAAATGAAATATTTTCTTACACTTGTGATCACGTATTTATGATCGGGGGAAGTTCTTGTCTACTAACTTCTAGATTGGGGTGCCAATTGATTTTTACTTGGAACATGATTTTCAGTGCACTAGTGGTTGATGTATATTGTCTACTGACTTCTAGTTCCTGGTCAACCAAGCCTATTGATGCATGAGATAAAATTGCTTCAAGTTCAATAGCTGAATATTGAAATATTCCTTAATATTTAATGCTTGTGAAAGAAATAGTGATAGGTAATGCTTCATGGTTTTGTAATCTTGTCAAGCATGCCTTGCTATCAATGGAAAGAGATGAAGATGTGAATAGAATGGTCATAAGTATACTCAATATTTTAGTCCTTGTTTTCTGGTTATTCTTTGCTTCCCCTGTTTAAATTTGATATGGGACTGTGTTGGCAGAGAGGATTTCTTAGAACTAGATTATGATACTTATAAATTTATCTCTGTATTTAATTAGATTTAACTCTCATCTCATGGTTTTTGATGTTGATGAGATATCTAACAATCAATCCTCAGGATAGAAATAGCAGCCAAATAACATCAAACAATGATGCTGTGTGGTAATGGTATTCATTTGATTAGATTCTGCCCTTCATATTAAGCTTGTGGGATTATAAGTTGTGCTTGTGTCTCAAATTATATCTCCCTTACTCTTATGCAATACTTCTGAATTCTGAAACTCACTTTCACTCTCTTATTTAATTTTACTGTAGGTATAAGACATTATCGCCTCTTGTAATTTAGAAATCCTTCCATAATCCACTATCAAAAGGGGCACAAAGATATAGAATGCTCTGTTATGGTTTCTACATTTATTTTATCAACTAGGAGTTCTAGATTGCAGTTCACATTCCTACTTGTCGGTGTCAATCATTTATTATATCAAAAAGTTATTTAAAGCACAAAAGAGAGGTCAGACAAACAAGGGAACAAAAGAGCTAGAGTTGAATAAATGGAAAAAAGAACAACGAATAATATTTCAAGCAATATTGCTCATCGCAGACATTACCACCTTGGACTGGCCGTGGGACATACATTACTTTTCTCTACACTGTTTATCAGAAATTAAACTGCCGGTGTATCTCAGAAAAGAAGAGACTTGAAGTTCACAGTGATGTGTAGGAGTATGCAACACTCCTCCCACAGAATGCCTCTGTCCTCAAAGATCCTCTTATTCTTCTCGTGCAAAATACTTCACATGCCAAACAAATATTCCCTTTCCCACAAAAAGAGGACTCAGAATAACCTACAACAATCTCTATAATCTTGATTAGGAGCAAGGCTAAACTTAAAGTTTACTAGAATCTATTTTATATTCTTGTAAAAAAAACAAATATTGGCAAAATGTATGATTCCAATCCTCAACAGTTCGCCATTGAGGGGAAAGGGAAAACAAATAGACCATTAGGTAGAGTGTCTGTGTCAAAGTCAGTAGTGTCAATTCTCCCCAGAGCCACTTAATTTAGTAAAACCCTATCTCTCTCACAGAATATCTACATTTCAAAGCTGAGTAAAGAAATGAGAATTTGGTTGAAGGAGAGTTTCTCAGAACAATTCTCAGCACAATTTATGTATAATAGCCATTTTAGAAAATGTTGGGTTCAGTGTGAGAATATGGTTTAGTTGTATAACTTGAGCGTAAAATGGGAAAAATTAGTTTTCAGTAGCAGTGGACCAGTAATGGAGGTCGACAGTTAAAACTGCACACCAATGGCAATGGTTATCCCGGAGATCATGTAGGGTGGTTTAGACCCTAACAGTGTGTGTCTTATACTATATTGTGTGTGTTCCCCAATGTACTAAAGAACTCTGTACTTAAAAATTGAGGTCTCATCATGACAAACACCCCTATAAACCATCGTTTTCTTTATTTAAGTTAATCATGAATTTCAAGTTTTCTTATGCTGTTGTCTTTTCTTTAGCAGTACATTGATTTAGGTGCATCTTCTGTTGCAATTAGATTTTCTTTACGTTTTCTTTTCCTTTCAACCTGTTTTTACGATTTTTCCTATTTATTGGATTGGATTGTTCCTGATCAGATTGCCATTTTTCTTTTGTTGGAAAAATAAAAAAACCAGCCATGGCTGCAAGAGGAGGAATGGAAACATTAAAACCAGCTTTGCAGCGGGTGTATATGACTAAAGCTTCTGCATATAGAGACGCTCTGAAAAATTTTATAGATGGCTATCAAGAAGGTATTCAGCAAGTCATGGAGAAAAAGAAAATTTCTGATTCCGAGAAGGGAAGCGAAAAAATGAAATAAAAATTTCTGATCGTATTGATGTTTTATGTAAAAGCTACAGAATTGTGACTACACTAGTTTAGAGGATTGGGCAGTTCAATTTCTAGTTCTAAAACTTGGTTTAGATTTTTTGTGTCGTTTCCGTGGTGCAATTTGAAATTCATACTGTTTTAAGCACCACCTATTTATTCACACGAATACACACTGTCATAAGAAAGGGTAGCAAATTCAACCTTTATGTTCCCTACAGAACTAGTTGCATGATTTTTTTTAATTTTATTATTATTATTATTATTTCCCCTACTATTGTCAGTTATTTTGGAGTTCTTAGTGACTTAAATTTCTTACAAGAAGGCATGGAGATATTAGTG

mRNA sequence

TATTAATTAAAAAAATTAAATACATTAAGTTAAACTTTACAATATAATAAAATTTATCGAGTAAAATAATAAAAACTTCTAAAATTTAAATAATTATAAACAACATTTTATTGATGCTTTAAAAAAAATAAAAGAATTAATATTCACTTCAAATTCTGATCAAATATCACACAAAATTGGATTATGGGCTTCGCTATTGACGGTTAACCGTCCAGCCCAAACTAAACCTAACCAGTGTTTTAGGTCCAATTTTTAGGGCCCGGCCCATCTGTCTTAGGATGAGAGTGAGCCGTTCGATCAGGTTAACTGAGGATCGTTTCCTCGCGCTCCGGAATTACCATTTCCCTCTTTTTCTCTGAATGACGTTTCGAGCCAATTTCTTGTTGGAACACAAGCTTGGAGCAGCAAATGCATGGAATGGTGAAATATAAGTCAGCTAATCTGTAGCAGGAATGAAGGCGAGGATCGTTTTAAGGAAGATTTATGACTACGTTCGGTATGATTTGAAGGAAATTGCATTTCCTTCGTCGTTGCCGGATCCTCCGCATTCAAAGAAGCGTCGAAAGCTTACATGGCGTGAACGATTCTTGGTGTTGAAGGAGGCTTCCAGGTTATATGCTGCTAGCTGGGTGCGGGACATTGGTCCTGAACTGCGACCAAATGACTATAAGATGGAAGAAAGCGAAAACAAAAAGAATTCAGCAAAAAGTGCCCCTAAGGAGAAAGAACCTTCAACACTGGAAGATCTGGCCATGGCTGCAAGAGGAGGAATGGAAACATTAAAACCAGCTTTGCAGCGGGTGTATATGACTAAAGCTTCTGCATATAGAGACGCTCTGAAAAATTTTATAGATGGCTATCAAGAAGGTATTCAGCAAGTCATGGAGAAAAAGAAAATTTCTGATTCCGAGAAGGGAAGCGAAAAAATGAAATAAAAATTTCTGATCGTATTGATGTTTTATGTAAAAGCTACAGAATTGTGACTACACTAGTTTAGAGGATTGGGCAGTTCAATTTCTAGTTCTAAAACTTGGTTTAGATTTTTTGTGTCGTTTCCGTGGTGCAATTTGAAATTCATACTGTTTTAAGCACCACCTATTTATTCACACGAATACACACTGTCATAAGAAAGGGTAGCAAATTCAACCTTTATGTTCCCTACAGAACTAGTTGCATGATTTTTTTTAATTTTATTATTATTATTATTATTTCCCCTACTATTGTCAGTTATTTTGGAGTTCTTAGTGACTTAAATTTCTTACAAGAAGGCATGGAGATATTAGTG

Coding sequence (CDS)

ATGAAGGCGAGGATCGTTTTAAGGAAGATTTATGACTACGTTCGGTATGATTTGAAGGAAATTGCATTTCCTTCGTCGTTGCCGGATCCTCCGCATTCAAAGAAGCGTCGAAAGCTTACATGGCGTGAACGATTCTTGGTGTTGAAGGAGGCTTCCAGGTTATATGCTGCTAGCTGGGTGCGGGACATTGGTCCTGAACTGCGACCAAATGACTATAAGATGGAAGAAAGCGAAAACAAAAAGAATTCAGCAAAAAGTGCCCCTAAGGAGAAAGAACCTTCAACACTGGAAGATCTGGCCATGGCTGCAAGAGGAGGAATGGAAACATTAAAACCAGCTTTGCAGCGGGTGTATATGACTAAAGCTTCTGCATATAGAGACGCTCTGAAAAATTTTATAGATGGCTATCAAGAAGGTATTCAGCAAGTCATGGAGAAAAAGAAAATTTCTGATTCCGAGAAGGGAAGCGAAAAAATGAAATAA

Protein sequence

MKARIVLRKIYDYVRYDLKEIAFPSSLPDPPHSKKRRKLTWRERFLVLKEASRLYAASWVRDIGPELRPNDYKMEESENKKNSAKSAPKEKEPSTLEDLAMAARGGMETLKPALQRVYMTKASAYRDALKNFIDGYQEGIQQVMEKKKISDSEKGSEKMK

Homology

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BLAST of Carg03653 vs. NCBI nr
Match: XP_022934670.1 (uncharacterized protein LOC111441792 [Cucurbita moschata])

HSP 1 Score: 308.5 bits (789), Expect = 1.3e-80
Identity = 159/160 (99.38%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 1   MKARIVLRKIYDYVRYDLKEIAFPSSLPDPPHSKKRRKLTWRERFLVLKEASRLYAASWV 60
           MKARIVLRKIYDYVRYDLKEIAFPSSLPDPPHSKKRRKLTWRERFLVLKEASRLYAASWV
Sbjct: 1   MKARIVLRKIYDYVRYDLKEIAFPSSLPDPPHSKKRRKLTWRERFLVLKEASRLYAASWV 60

Query: 61  RDIGPELRPNDYKMEESENKKNSAKSAPKEKEPSTLEDLAMAARGGMETLKPALQRVYMT 120
           RDIGPELRPNDYK+EESENKKNSAKSAPKEKEPSTLEDLAMAARGGMETLKPALQRVYMT
Sbjct: 61  RDIGPELRPNDYKVEESENKKNSAKSAPKEKEPSTLEDLAMAARGGMETLKPALQRVYMT 120

Query: 121 KASAYRDALKNFIDGYQEGIQQVMEKKKISDSEKGSEKMK 161
           KASAYRDALKNFIDGYQEGIQQVMEKKKISDSEKGSEKMK
Sbjct: 121 KASAYRDALKNFIDGYQEGIQQVMEKKKISDSEKGSEKMK 160

[Close]

BLAST of Carg03653 vs. NCBI nr
Match: XP_023522298.1 (uncharacterized protein LOC111786187 [Cucurbita pepo subsp. pepo] >XP_023528947.1 uncharacterized protein LOC111791710 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 302.4 bits (773), Expect = 9.3e-79
Identity = 155/160 (96.88%), Postives = 159/160 (99.38%), Query Frame = 0


Query: 1   MKARIVLRKIYDYVRYDLKEIAFPSSLPDPPHSKKRRKLTWRERFLVLKEASRLYAASWV 60
           MKARIVLRKIYDYVRYDLKEIAFPSSLPDPPHSKKRRKLTW ERFLVLKEASRLYAASWV
Sbjct: 1   MKARIVLRKIYDYVRYDLKEIAFPSSLPDPPHSKKRRKLTWHERFLVLKEASRLYAASWV 60

Query: 61  RDIGPELRPNDYKMEESENKKNSAKSAPKEKEPSTLEDLAMAARGGMETLKPALQRVYMT 120
           RDIGPELRPNDYK+EESENKKNSAKSAPKEKEPSTLEDLA+AARGGMETLKPALQRVYMT
Sbjct: 61  RDIGPELRPNDYKVEESENKKNSAKSAPKEKEPSTLEDLAVAARGGMETLKPALQRVYMT 120

Query: 121 KASAYRDALKNFIDGYQEGIQQVMEKKKISDSEKGSEKMK 161
           KASAYRDALKNFIDGYQEGIQQVMEKK+ISDS+KGSEKMK
Sbjct: 121 KASAYRDALKNFIDGYQEGIQQVMEKKEISDSQKGSEKMK 160

[Close]

BLAST of Carg03653 vs. NCBI nr
Match: XP_022983134.1 (uncharacterized protein LOC111481775 [Cucurbita maxima])

HSP 1 Score: 298.5 bits (763), Expect = 1.3e-77
Identity = 153/160 (95.62%), Postives = 158/160 (98.75%), Query Frame = 0


Query: 1   MKARIVLRKIYDYVRYDLKEIAFPSSLPDPPHSKKRRKLTWRERFLVLKEASRLYAASWV 60
           MKARIVLRKIYDYVRYDLKEIAFPSSLPDPPHSKKRRKLTW ERFLVLKEASRLYAASWV
Sbjct: 1   MKARIVLRKIYDYVRYDLKEIAFPSSLPDPPHSKKRRKLTWLERFLVLKEASRLYAASWV 60

Query: 61  RDIGPELRPNDYKMEESENKKNSAKSAPKEKEPSTLEDLAMAARGGMETLKPALQRVYMT 120
           RDIGPELRPNDYK+EESENKKNSA+SAPKEKEPSTLEDLA+AARGGMETLKPALQRVYMT
Sbjct: 61  RDIGPELRPNDYKVEESENKKNSAESAPKEKEPSTLEDLAVAARGGMETLKPALQRVYMT 120

Query: 121 KASAYRDALKNFIDGYQEGIQQVMEKKKISDSEKGSEKMK 161
           KAS YRDALKNFIDGYQEGIQQVMEKK+ISDS+KGSEKMK
Sbjct: 121 KASGYRDALKNFIDGYQEGIQQVMEKKEISDSQKGSEKMK 160

[Close]

BLAST of Carg03653 vs. NCBI nr
Match: XP_022144745.1 (uncharacterized protein LOC111014361 [Momordica charantia] >XP_022144746.1 uncharacterized protein LOC111014361 [Momordica charantia])

HSP 1 Score: 283.5 bits (724), Expect = 4.5e-73
Identity = 142/160 (88.75%), Postives = 154/160 (96.25%), Query Frame = 0


Query: 1   MKARIVLRKIYDYVRYDLKEIAFPSSLPDPPHSKKRRKLTWRERFLVLKEASRLYAASWV 60
           MK RIVLRK+YDY+RYDLKEIAFPSSLPDPPH KKRRKLTW ERFLVLKEASRLYAASWV
Sbjct: 1   MKTRIVLRKLYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWV 60

Query: 61  RDIGPELRPNDYKMEESENKKNSAKSAPKEKEPSTLEDLAMAARGGMETLKPALQRVYMT 120
           RDIGP+LRPNDYK+EESENK N+AKSA KEKEPSTLEDLA+AARGGMETLKPALQRVYMT
Sbjct: 61  RDIGPDLRPNDYKVEESENKTNAAKSASKEKEPSTLEDLAVAARGGMETLKPALQRVYMT 120

Query: 121 KASAYRDALKNFIDGYQEGIQQVMEKKKISDSEKGSEKMK 161
           +ASAYRDALKNFIDGYQEG+QQVMEKK+ SDS+KGS+K+K
Sbjct: 121 RASAYRDALKNFIDGYQEGVQQVMEKKEASDSQKGSDKIK 160

[Close]

BLAST of Carg03653 vs. NCBI nr
Match: XP_004136494.1 (PREDICTED: uncharacterized protein LOC101202894 [Cucumis sativus] >KGN59162.1 hypothetical protein Csa_3G778190 [Cucumis sativus])

HSP 1 Score: 276.2 bits (705), Expect = 7.2e-71
Identity = 141/159 (88.68%), Postives = 150/159 (94.34%), Query Frame = 0


Query: 1   MKARIVLRKIYDYVRYDLKEIAFPSSLPDPPHSKKRRKLTWRERFLVLKEASRLYAASWV 60
           MKA+IVLRKIYDYVRYDLKEIAFPSSLPDPPH KKR KL+W ERFLVLKEASRLYAASWV
Sbjct: 1   MKAKIVLRKIYDYVRYDLKEIAFPSSLPDPPHIKKRGKLSWNERFLVLKEASRLYAASWV 60

Query: 61  RDIGPELRPNDYKMEESENKKNSAKSAPKEKEPSTLEDLAMAARGGMETLKPALQRVYMT 120
           RDIGPELRP DYK++ESENK NS K APKEKEPSTLEDLA+AARGGMETLKPALQRVYMT
Sbjct: 61  RDIGPELRPYDYKVKESENKPNSPKRAPKEKEPSTLEDLAVAARGGMETLKPALQRVYMT 120

Query: 121 KASAYRDALKNFIDGYQEGIQQVMEKKKISDSEKGSEKM 160
           +ASAYRDALKNFIDGYQEGIQQVMEKK  SDS+KGS+K+
Sbjct: 121 RASAYRDALKNFIDGYQEGIQQVMEKKNASDSQKGSDKI 159

[Close]

BLAST of Carg03653 vs. TAIR10
Match: AT5G06240.1 (embryo defective 2735)

HSP 1 Score: 209.9 bits (533), Expect = 1.1e-54
Identity = 107/152 (70.39%), Postives = 122/152 (80.26%), Query Frame = 0


Query: 1   MKARIVLRKIYDYVRYDLKEIAFPSSLPDPPHSKKRRKLTWRERFLVLKEASRLYAASWV 60
           MK ++V RK+ DY+ YDLKEI  PSSLPDPPH  KRRKLTW ERFLVLKEASRLYAASWV
Sbjct: 1   MKLKVVYRKVSDYICYDLKEIVLPSSLPDPPHVVKRRKLTWHERFLVLKEASRLYAASWV 60

Query: 61  RDIGPELRPNDYKMEESENKKNSAKSAPKEKEPSTLEDLAMAARGGMETLKPALQRVYMT 120
           RDIGPELRPNDYK +     K  AK A  E EPS LEDLA+AARGGMETL+PAL R+YMT
Sbjct: 61  RDIGPELRPNDYKKQGDAEPKKQAKEA--ENEPSVLEDLAVAARGGMETLRPALHRLYMT 120

Query: 121 KASAYRDALKNFIDGYQEGIQQVMEKKKISDS 153
           +AS Y+DAL +FI GY EG+QQVM+ K  S++
Sbjct: 121 RASNYKDALTSFIKGYHEGLQQVMQNKAESEA 150

[Close]

BLAST of Carg03653 vs. TrEMBL
Match: tr|A0A0A0LEN2|A0A0A0LEN2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G778190 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 4.7e-71
Identity = 141/159 (88.68%), Postives = 150/159 (94.34%), Query Frame = 0


Query: 1   MKARIVLRKIYDYVRYDLKEIAFPSSLPDPPHSKKRRKLTWRERFLVLKEASRLYAASWV 60
           MKA+IVLRKIYDYVRYDLKEIAFPSSLPDPPH KKR KL+W ERFLVLKEASRLYAASWV
Sbjct: 1   MKAKIVLRKIYDYVRYDLKEIAFPSSLPDPPHIKKRGKLSWNERFLVLKEASRLYAASWV 60

Query: 61  RDIGPELRPNDYKMEESENKKNSAKSAPKEKEPSTLEDLAMAARGGMETLKPALQRVYMT 120
           RDIGPELRP DYK++ESENK NS K APKEKEPSTLEDLA+AARGGMETLKPALQRVYMT
Sbjct: 61  RDIGPELRPYDYKVKESENKPNSPKRAPKEKEPSTLEDLAVAARGGMETLKPALQRVYMT 120

Query: 121 KASAYRDALKNFIDGYQEGIQQVMEKKKISDSEKGSEKM 160
           +ASAYRDALKNFIDGYQEGIQQVMEKK  SDS+KGS+K+
Sbjct: 121 RASAYRDALKNFIDGYQEGIQQVMEKKNASDSQKGSDKI 159

[Close]

BLAST of Carg03653 vs. TrEMBL
Match: tr|A0A1S3B6Q8|A0A1S3B6Q8_CUCME (uncharacterized protein LOC103486641 OS=Cucumis melo OX=3656 GN=LOC103486641 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 1.8e-70
Identity = 139/159 (87.42%), Postives = 150/159 (94.34%), Query Frame = 0


Query: 1   MKARIVLRKIYDYVRYDLKEIAFPSSLPDPPHSKKRRKLTWRERFLVLKEASRLYAASWV 60
           MKA+IV RKIYDYVRYDLKEIAFPSSLPDPPH KKR KLTW +RFLVLKEASRLYAASWV
Sbjct: 1   MKAKIVFRKIYDYVRYDLKEIAFPSSLPDPPHVKKRPKLTWHDRFLVLKEASRLYAASWV 60

Query: 61  RDIGPELRPNDYKMEESENKKNSAKSAPKEKEPSTLEDLAMAARGGMETLKPALQRVYMT 120
           RDIGPELRP++YK+EESENK NS KSAPKEKEPSTLEDLA+AARGGMETLKPALQRVYMT
Sbjct: 61  RDIGPELRPHEYKVEESENKTNSPKSAPKEKEPSTLEDLAVAARGGMETLKPALQRVYMT 120

Query: 121 KASAYRDALKNFIDGYQEGIQQVMEKKKISDSEKGSEKM 160
           +A+AYRDALK FIDGYQEGIQQVMEKK  SDS+KGS+K+
Sbjct: 121 RAAAYRDALKKFIDGYQEGIQQVMEKKDASDSQKGSDKI 159

[Close]

BLAST of Carg03653 vs. TrEMBL
Match: tr|M5W3A7|M5W3A7_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G077900 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 9.6e-64
Identity = 129/158 (81.65%), Postives = 142/158 (89.87%), Query Frame = 0


Query: 1   MKARIVLRKIYDYVRYDLKEIAFPSSLPDPPHSKKRRKLTWRERFLVLKEASRLYAASWV 60
           MK R+V RK+YDYVRYDLKEIAFPSSLPDPPH KKRRKLTW ERFLVLKEASRLYAASWV
Sbjct: 1   MKVRVVCRKLYDYVRYDLKEIAFPSSLPDPPHIKKRRKLTWNERFLVLKEASRLYAASWV 60

Query: 61  RDIGPELRPNDYKMEESENKKNSAKSAPKEKEPSTLEDLAMAARGGMETLKPALQRVYMT 120
           RDIGPELRPND+K EESE+K    +   KEKEPSTLEDLA+AARGGMETLKPALQRVYMT
Sbjct: 61  RDIGPELRPNDFKDEESEDKPGRPQGPAKEKEPSTLEDLAVAARGGMETLKPALQRVYMT 120

Query: 121 KASAYRDALKNFIDGYQEGIQQVMEKKKISDSEKGSEK 159
           +ASAY+DAL++FI GYQEGIQQVMEKK+ S SE+ S+K
Sbjct: 121 RASAYKDALQSFIHGYQEGIQQVMEKKEDSKSEQESDK 158

[Close]

BLAST of Carg03653 vs. TrEMBL
Match: tr|A0A2P5EBG1|A0A2P5EBG1_9ROSA (Embryo defective OS=Trema orientalis OX=63057 GN=TorRG33x02_213060 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 1.8e-62
Identity = 128/159 (80.50%), Postives = 143/159 (89.94%), Query Frame = 0


Query: 1   MKARIVLRKIYDYVRYDLKEIAFPSSLPDPPHSKKRRKLTWRERFLVLKEASRLYAASWV 60
           MK R+V RK+YDYVRYDLKEIAFPSSLPDPPH KKRRKLTW ERFLVLKEASRLYAASWV
Sbjct: 1   MKVRVVCRKLYDYVRYDLKEIAFPSSLPDPPHIKKRRKLTWAERFLVLKEASRLYAASWV 60

Query: 61  RDIGPELRPNDY-KMEESENKKNSAKSAPKEKEPSTLEDLAMAARGGMETLKPALQRVYM 120
           RDIGP+LRPNDY K EE E+  N  KS  KEKEPSTLEDLA+AARGGMETL+PALQRVYM
Sbjct: 61  RDIGPDLRPNDYKKTEEDEDNPNKVKSQKKEKEPSTLEDLAVAARGGMETLRPALQRVYM 120

Query: 121 TKASAYRDALKNFIDGYQEGIQQVMEKKKISDSEKGSEK 159
           T+ASAYRDALK+FI+GYQEGIQQ+M++K+ S S+K S+K
Sbjct: 121 TRASAYRDALKSFIEGYQEGIQQIMDRKE-STSQKESDK 158

[Close]

BLAST of Carg03653 vs. TrEMBL
Match: tr|A0A059DJD7|A0A059DJD7_EUCGR (Uncharacterized protein (Fragment) OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_A02626 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 5.2e-62
Identity = 126/155 (81.29%), Postives = 139/155 (89.68%), Query Frame = 0


Query: 1   MKARIVLRKIYDYVRYDLKEIAFPSSLPDPPHSKKRRKLTWRERFLVLKEASRLYAASWV 60
           MK R+V RK+YDYVRYDLKEIAFPSSLPDPPH KKRRKLTW +RFLVLKEASRLYAASWV
Sbjct: 125 MKLRVVCRKLYDYVRYDLKEIAFPSSLPDPPHIKKRRKLTWHDRFLVLKEASRLYAASWV 184

Query: 61  RDIGPELRPNDYKM-EESENKKNSAKSAPKEKEPSTLEDLAMAARGGMETLKPALQRVYM 120
           RDIGPELRPNDYK  E+SE+K   AK   +EKEPSTLEDLA+AARGGMETLKPALQRVYM
Sbjct: 185 RDIGPELRPNDYKKDEDSEDKPRRAKKVAEEKEPSTLEDLAVAARGGMETLKPALQRVYM 244

Query: 121 TKASAYRDALKNFIDGYQEGIQQVMEKKKISDSEK 155
            +ASAYRDALK+FI+GYQEG+QQVMEKK  + S+K
Sbjct: 245 MRASAYRDALKSFIEGYQEGVQQVMEKKGDATSQK 279

The following BLAST results are available for this feature:

BLAST of Carg03653 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022934670.1	1.3e-80	99.38	uncharacterized protein LOC111441792 [Cucurbita moschata]	[more]
XP_023522298.1	9.3e-79	96.88	uncharacterized protein LOC111786187 [Cucurbita pepo subsp. pepo] >XP_023528947....	[more]
XP_022983134.1	1.3e-77	95.63	uncharacterized protein LOC111481775 [Cucurbita maxima]	[more]
XP_022144745.1	4.5e-73	88.75	uncharacterized protein LOC111014361 [Momordica charantia] >XP_022144746.1 uncha...	[more]
XP_004136494.1	7.2e-71	88.68	PREDICTED: uncharacterized protein LOC101202894 [Cucumis sativus] >KGN59162.1 hy...	[more]

BLAST of Carg03653 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G06240.1	1.1e-54	70.39	embryo defective 2735	[more]

BLAST of Carg03653 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg03653 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LEN2\|A0A0A0LEN2_CUCSA	4.7e-71	88.68	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G778190 PE=4 SV=1	[more]
tr\|A0A1S3B6Q8\|A0A1S3B6Q8_CUCME	1.8e-70	87.42	uncharacterized protein LOC103486641 OS=Cucumis melo OX=3656 GN=LOC103486641 PE=...	[more]
tr\|M5W3A7\|M5W3A7_PRUPE	9.6e-64	81.65	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G077900 PE=4 SV=1	[more]
tr\|A0A2P5EBG1\|A0A2P5EBG1_9ROSA	1.8e-62	80.50	Embryo defective OS=Trema orientalis OX=63057 GN=TorRG33x02_213060 PE=4 SV=1	[more]
tr\|A0A059DJD7\|A0A059DJD7_EUCGR	5.2e-62	81.29	Uncharacterized protein (Fragment) OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_A02...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg03653-RA	Carg03653-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..98
None	No IPR available	PANTHER	PTHR36064	FAMILY NOT NAMED	coord: 1..157

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg03653	Cla017665	Watermelon (97103) v1	carwmB0237
Carg03653	Csa3G778190	Cucumber (Chinese Long) v2	carcuB0276
Carg03653	MELO3C009499	Melon (DHL92) v3.5.1	carmeB0251
Carg03653	ClCG10G018670	Watermelon (Charleston Gray)	carwcgB0240
Carg03653	CSPI03G35200	Wild cucumber (PI 183967)	carcpiB0280
Carg03653	Cucsa.241430	Cucumber (Gy14) v1	carcgyB0294
Carg03653	CmaCh14G003310	Cucurbita maxima (Rimu)	carcmaB0343
Carg03653	CmoCh14G003250	Cucurbita moschata (Rifu)	carcmoB0347
Carg03653	Lsi03G018640	Bottle gourd (USVL1VR-Ls)	carlsiB225
Carg03653	Cp4.1LG03g00770	Cucurbita pepo (Zucchini)	carcpeB0353
Carg03653	MELO3C009499.2	Melon (DHL92) v3.6.1	carmedB0261
Carg03653	CsaV3_3G037560	Cucumber (Chinese Long) v3	carcucB0279
Carg03653	Cla97C10G201710	Watermelon (97103) v2	carwmbB0254
Carg03653	Bhi11G001953	Wax gourd	carwgoB0322

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg03653	Silver-seed gourd	carcarB276
Carg03653	Silver-seed gourd	carcarB289
Carg03653	Silver-seed gourd	carcarB290
Carg03653	Silver-seed gourd	carcarB292
Carg03653	Silver-seed gourd	carcarB294
Carg03653	Cucumber (Gy14) v2	carcgybB0263
Carg03653	Cucumber (Gy14) v2	carcgybB0267
Carg03653	Cucumber (Gy14) v1	carcgyB0291
Carg03653	Cucumber (Gy14) v1	carcgyB0293
Carg03653	Cucurbita maxima (Rimu)	carcmaB0345
Carg03653	Cucurbita maxima (Rimu)	carcmaB0347
Carg03653	Cucurbita maxima (Rimu)	carcmaB0348
Carg03653	Cucurbita maxima (Rimu)	carcmaB0350
Carg03653	Cucurbita maxima (Rimu)	carcmaB0351
Carg03653	Cucurbita moschata (Rifu)	carcmoB0348
Carg03653	Cucurbita moschata (Rifu)	carcmoB0349
Carg03653	Cucurbita moschata (Rifu)	carcmoB0351
Carg03653	Cucurbita moschata (Rifu)	carcmoB0352
Carg03653	Cucurbita pepo (Zucchini)	carcpeB0348
Carg03653	Cucurbita pepo (Zucchini)	carcpeB0350
Carg03653	Cucurbita pepo (Zucchini)	carcpeB0351
Carg03653	Cucurbita pepo (Zucchini)	carcpeB0354
Carg03653	Wild cucumber (PI 183967)	carcpiB0282
Carg03653	Wild cucumber (PI 183967)	carcpiB0284
Carg03653	Cucumber (Chinese Long) v2	carcuB0278
Carg03653	Cucumber (Chinese Long) v2	carcuB0280
Carg03653	Cucumber (Chinese Long) v3	carcucB0280
Carg03653	Cucumber (Chinese Long) v3	carcucB0282
Carg03653	Bottle gourd (USVL1VR-Ls)	carlsiB222
Carg03653	Bottle gourd (USVL1VR-Ls)	carlsiB223
Carg03653	Melon (DHL92) v3.5.1	carmeB0252
Carg03653	Melon (DHL92) v3.5.1	carmeB0253
Carg03653	Melon (DHL92) v3.6.1	carmedB0262
Carg03653	Melon (DHL92) v3.6.1	carmedB0263
Carg03653	Watermelon (Charleston Gray)	carwcgB0241
Carg03653	Watermelon (Charleston Gray)	carwcgB0242
Carg03653	Watermelon (97103) v1	carwmB0238
Carg03653	Watermelon (97103) v1	carwmB0239
Carg03653	Watermelon (97103) v2	carwmbB0255
Carg03653	Watermelon (97103) v2	carwmbB0256
Carg03653	Wax gourd	carwgoB0317
Carg03653	Wax gourd	carwgoB0328
Carg03653	Wax gourd	carwgoB0330