Carg03646 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTAGCAAAGAAGAAGAAGAAGAAGATGATGATGATGATGAAGCTCCCATCTCTCTTCAAATCCTCAGGACTCCACCACAACGACAAGTCGGCTTGGCCCTGGCCGTCATGTCGGCAGCCAAGAACCCTCTCTTTCAGGACCACCACCGCCGCCGCCGCAACAGAATCCTCGGACTCCTTTTTCACACTCTCCTCCGAGTCCTCCGGCAGCCTCTCGACGGCGTCCGAGTGCTCCGGCGGTGACCCAATTGAGAGAATGATTCGAGGCCTCAGGTCGACGGAGAGGCTCCTCTTCGAGCCAGCCGGAAAATCAAGGTCGATTTTAAAAGAGGAGAAGAAGAAGGCGGCCGTGCCGCCGCCATTGAAGGAAGGGACGACGGTGGTATCAATGGATTCCGATGATCCGTTTTGGGATTTTAGGAAATCAATGGAGGAAATGGTGGAGGCATATGGGCTGAGGGATTGGAAGAGCTTAGAGGAGCTTTTGAGTTGGTATTTGAGTGTTAATGGCAAAAACAACCATGGATTTATTCTTGGAGCTTTTCTTGATTTGCTTGTCTCTCTTGCAATGGCGGCGGCGGCGGCGGCGGCGGCTTCTTCATCTTCTTCATCAATTTCTTCTTCTTCTTCATTTTTACCTTGTGTATCATCATCCATGGAGATTGAGGACATCACTTCGTTAGATGAACATCATCATCATCATGTTTTCTTTTAATTTTCATTTTTTTTTTTTAATGTTTAATCGTTTTTAGAATGTAAATACAGCTTCCACCATGTGTTATAATATTAGCGGCTACAAAATTTATGTTTGA ATGTTAGCAAAGAAGAAGAAGAAGAAGATGATGATGATGATGAAGCTCCCATCTCTCTTCAAATCCTCAGGACTCCACCACAACGACAAGTCGGCTTGGCCCTGGCCGTCATGTCGGCAGCCAAGAACCCTCTCTTTCAGGACCACCACCGCCGCCGCCGCAACAGAATCCTCGGACTCCTTTTTCACACTCTCCTCCGAGTCCTCCGGCAGCCTCTCGACGGCGTCCGAGTGCTCCGGCGGTGACCCAATTGAGAGAATGATTCGAGGCCTCAGGTCGACGGAGAGGCTCCTCTTCGAGCCAGCCGGAAAATCAAGGTCGATTTTAAAAGAGGAGAAGAAGAAGGCGGCCGTGCCGCCGCCATTGAAGGAAGGGACGACGGTGGTATCAATGGATTCCGATGATCCGTTTTGGGATTTTAGGAAATCAATGGAGGAAATGGTGGAGGCATATGGGCTGAGGGATTGGAAGAGCTTAGAGGAGCTTTTGAGTTGGTATTTGAGTGTTAATGGCAAAAACAACCATGGATTTATTCTTGGAGCTTTTCTTGATTTGCTTGTCTCTCTTGCAATGGCGGCGGCGGCGGCGGCGGCGGCTTCTTCATCTTCTTCATCAATTTCTTCTTCTTCTTCATTTTTACCTTGTGTATCATCATCCATGGAGATTGAGGACATCACTTCGTTAGATGAACATCATCATCATCATAATGTAAATACAGCTTCCACCATGTGTTATAATATTAGCGGCTACAAAATTTATGTTTGA ATGTTAGCAAAGAAGAAGAAGAAGAAGATGATGATGATGATGAAGCTCCCATCTCTCTTCAAATCCTCAGGACTCCACCACAACGACAAGTCGGCTTGGCCCTGGCCGTCATGTCGGCAGCCAAGAACCCTCTCTTTCAGGACCACCACCGCCGCCGCCGCAACAGAATCCTCGGACTCCTTTTTCACACTCTCCTCCGAGTCCTCCGGCAGCCTCTCGACGGCGTCCGAGTGCTCCGGCGGTGACCCAATTGAGAGAATGATTCGAGGCCTCAGGTCGACGGAGAGGCTCCTCTTCGAGCCAGCCGGAAAATCAAGGTCGATTTTAAAAGAGGAGAAGAAGAAGGCGGCCGTGCCGCCGCCATTGAAGGAAGGGACGACGGTGGTATCAATGGATTCCGATGATCCGTTTTGGGATTTTAGGAAATCAATGGAGGAAATGGTGGAGGCATATGGGCTGAGGGATTGGAAGAGCTTAGAGGAGCTTTTGAGTTGGTATTTGAGTGTTAATGGCAAAAACAACCATGGATTTATTCTTGGAGCTTTTCTTGATTTGCTTGTCTCTCTTGCAATGGCGGCGGCGGCGGCGGCGGCGGCTTCTTCATCTTCTTCATCAATTTCTTCTTCTTCTTCATTTTTACCTTGTGTATCATCATCCATGGAGATTGAGGACATCACTTCGTTAGATGAACATCATCATCATCATAATGTAAATACAGCTTCCACCATGTGTTATAATATTAGCGGCTACAAAATTTATGTTTGA MLAKKKKKKMMMMMKLPSLFKSSGLHHNDKSAWPWPSCRQPRTLSFRTTTAAAATESSDSFFTLSSESSGSLSTASECSGGDPIERMIRGLRSTERLLFEPAGKSRSILKEEKKKAAVPPPLKEGTTVVSMDSDDPFWDFRKSMEEMVEAYGLRDWKSLEELLSWYLSVNGKNNHGFILGAFLDLLVSLAMAAAAAAAASSSSSSISSSSSFLPCVSSSMEIEDITSLDEHHHHHNVNTASTMCYNISGYKIYV
BLAST of Carg03646 vs. NCBI nr
Match: XP_022983094.1 (transcription repressor OFP15-like [Cucurbita maxima]) HSP 1 Score: 270.8 bits (691), Expect = 4.8e-69 Identity = 154/175 (88.00%), Postives = 154/175 (88.00%), Query Frame = 0
BLAST of Carg03646 vs. NCBI nr
Match: XP_022935216.1 (transcription repressor OFP15-like [Cucurbita moschata]) HSP 1 Score: 255.4 bits (651), Expect = 2.1e-64 Identity = 166/179 (92.74%), Postives = 167/179 (93.30%), Query Frame = 0
BLAST of Carg03646 vs. NCBI nr
Match: XP_023528403.1 (transcription repressor OFP15-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 239.6 bits (610), Expect = 1.2e-59 Identity = 144/177 (81.36%), Postives = 145/177 (81.92%), Query Frame = 0
BLAST of Carg03646 vs. NCBI nr
Match: XP_023540873.1 (transcription repressor OFP15-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 196.4 bits (498), Expect = 1.1e-46 Identity = 130/182 (71.43%), Postives = 140/182 (76.92%), Query Frame = 0
BLAST of Carg03646 vs. NCBI nr
Match: XP_004136703.2 (PREDICTED: transcription repressor OFP15-like [Cucumis sativus] >KGN59180.1 hypothetical protein Csa_3G778360 [Cucumis sativus]) HSP 1 Score: 181.4 bits (459), Expect = 3.8e-42 Identity = 106/177 (59.89%), Postives = 120/177 (67.80%), Query Frame = 0
BLAST of Carg03646 vs. TAIR10
Match: AT2G36050.1 (ovate family protein 15) HSP 1 Score: 100.1 bits (248), Expect = 2.0e-21 Identity = 63/110 (57.27%), Postives = 85/110 (77.27%), Query Frame = 0
BLAST of Carg03646 vs. TAIR10
Match: AT3G52540.1 (ovate family protein 18) HSP 1 Score: 89.4 bits (220), Expect = 3.6e-18 Identity = 59/110 (53.64%), Postives = 84/110 (76.36%), Query Frame = 0
BLAST of Carg03646 vs. TAIR10
Match: AT5G04820.1 (ovate family protein 13) HSP 1 Score: 87.8 bits (216), Expect = 1.0e-17 Identity = 48/124 (38.71%), Postives = 74/124 (59.68%), Query Frame = 0
BLAST of Carg03646 vs. TAIR10
Match: AT1G79960.1 (ovate family protein 14) HSP 1 Score: 58.9 bits (141), Expect = 5.2e-09 Identity = 31/62 (50.00%), Postives = 44/62 (70.97%), Query Frame = 0
BLAST of Carg03646 vs. TAIR10
Match: AT1G05420.1 (ovate family protein 12) HSP 1 Score: 57.8 bits (138), Expect = 1.2e-08 Identity = 31/63 (49.21%), Postives = 43/63 (68.25%), Query Frame = 0
BLAST of Carg03646 vs. Swiss-Prot
Match: sp|Q9SJ45|OPF15_ARATH (Transcription repressor OFP15 OS=Arabidopsis thaliana OX=3702 GN=OFP15 PE=1 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 3.6e-20 Identity = 63/110 (57.27%), Postives = 85/110 (77.27%), Query Frame = 0
BLAST of Carg03646 vs. Swiss-Prot
Match: sp|Q9SVD5|OFP18_ARATH (Transcription repressor OFP18 OS=Arabidopsis thaliana OX=3702 GN=OFP18 PE=2 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 6.4e-17 Identity = 59/110 (53.64%), Postives = 84/110 (76.36%), Query Frame = 0
BLAST of Carg03646 vs. Swiss-Prot
Match: sp|Q9FMC8|OPF13_ARATH (Transcription repressor OFP13 OS=Arabidopsis thaliana OX=3702 GN=OFP13 PE=1 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 1.9e-16 Identity = 48/124 (38.71%), Postives = 74/124 (59.68%), Query Frame = 0
BLAST of Carg03646 vs. Swiss-Prot
Match: sp|Q9S7T5|OFP14_ARATH (Transcription repressor OFP14 OS=Arabidopsis thaliana OX=3702 GN=OFP14 PE=1 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 9.3e-08 Identity = 31/62 (50.00%), Postives = 44/62 (70.97%), Query Frame = 0
BLAST of Carg03646 vs. Swiss-Prot
Match: sp|F4I8R6|OFP12_ARATH (Transcription repressor OFP12 OS=Arabidopsis thaliana OX=3702 GN=OFP12 PE=1 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 2.1e-07 Identity = 31/63 (49.21%), Postives = 43/63 (68.25%), Query Frame = 0
BLAST of Carg03646 vs. TrEMBL
Match: tr|A0A0A0LB05|A0A0A0LB05_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G778360 PE=4 SV=1) HSP 1 Score: 181.4 bits (459), Expect = 2.5e-42 Identity = 106/177 (59.89%), Postives = 120/177 (67.80%), Query Frame = 0
BLAST of Carg03646 vs. TrEMBL
Match: tr|A0A1S3B6U9|A0A1S3B6U9_CUCME (transcription repressor OFP15-like OS=Cucumis melo OX=3656 GN=LOC103486657 PE=4 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 2.4e-37 Identity = 98/171 (57.31%), Postives = 113/171 (66.08%), Query Frame = 0
BLAST of Carg03646 vs. TrEMBL
Match: tr|A0A061ETM5|A0A061ETM5_THECC (Ovate family protein 13, putative OS=Theobroma cacao OX=3641 GN=TCM_022847 PE=4 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 4.6e-36 Identity = 92/172 (53.49%), Postives = 107/172 (62.21%), Query Frame = 0
BLAST of Carg03646 vs. TrEMBL
Match: tr|M5W320|M5W320_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa010050mg PE=4 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 4.8e-33 Identity = 94/198 (47.47%), Postives = 110/198 (55.56%), Query Frame = 0
BLAST of Carg03646 vs. TrEMBL
Match: tr|A0A251N9F7|A0A251N9F7_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G098500 PE=4 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 4.8e-33 Identity = 94/198 (47.47%), Postives = 110/198 (55.56%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |