Carg03575 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGTAGACAGCTATTTCTTTTGTTCCTGTCTTTCTCATTAGCTGTGGAAGCACTCCATGCATTTATACAAGATGAATCTGAACACAAGTAAGTAGTTTCCATAAACAATAATTTGGAGACGAGATGTAATATAACTGTGATTCTTTATTAGAATACAATCTAGAAGCTTTTCCCCTGTCAATTCCTTGGTGGTAGTCTATTTTGCTGTTTTTAGGCTCTTGCCACTTATTGTTGTCGTATATTTAATGGTTTAGGTTTCTAATTTCTCTTTGTGTACCTTAGATGCCTTGGTTGGTAGGTGTTCCTGTTATGCAAAATTTTTAATTATTTTAATATATTTTTAATTTGTTTTTTTCATATTGTAATTTTTAGCTGGCAGAATTCATGTCCACAGGACATGTCTGTGGACTTGACACAGACATGGTGATTGATTCTACTAGGAAATATTGTTACAATATAAACAAACACCTTTGGGGAAGCATATATTTTATAAAACTATCAACTTATATATGTTTGTGTGTGTGTGTGTGTTTGCATATATAAGATACATTGCTGTTACGCTTACCATAAAAATGTCATGCATTTTTGTTGCTTAATATGATTGTGTGACAGTGTATTGGGATGTGTAGGTGTCCTAGACTCTTTCATTCAGATTCTCCTAGTATGTCTATATATTTAGATACTCTTAGTACGTCCAAATATTTAGATATTCGTAGTATGTCTATATATTTCGATACTCTTATTGTATCTAGGCTTTTTTGTAATAATGACCTTGATCTAATTTTGTATGTTTATTCATTTGAATGAGTTCTTGTGTTATATTTTATAGTGATTTACCATGATTTTAGTATACCTGATAATTATTTTCACCTTGCAGGCACTATTTAATTTTCTCAGCCGTAACAAATTTAATGGTCAATCTTATCGGTGTTTGGTTCTTCAGGAGCTATGCTCGCCTTAATCTTGGTGAGTCCCCTGTTTTAGGTTACATCATCTGGCATCATTGACAAGACTAGGCGCATGTGTTAGATTTAAGATAGTATGTATTAGATTTAATACTTTTTACAAGACTAGGCGTATGTGTTAGATTTAAGATAGTATGTATTAGATTTAATATTTTTCACAAGACTAGGCGTAGGACGTTGTAAATATCTAGAAACTACGTACTATTAGGTCATTTCGTCCATTGCTTTTGGAGTACATGATACAGACATATACTCTCTCCCAGCTTCCCATAATTTGTATAATATCTATAGTATTGATATAGTGTTCGTAAAAAAATATTTATTTAAGTGTGATTATATGATTGTATTTTCTGAACAATAATGTTCTCATACTTATAATAAAGCTCTAAACTGACATATTACCTCATTTTCAAGGGCAAATTTAAAAACTAATTGTGAAGAATATAAAATCATGGTAAAATTATAATTTTTCGTTCCACTTTTTGTCTATGTAGTCCTAATTTTTCTTTTTTTATCAAAAAATCAATTACTTTTTAAAACTTTGAATTATGGATCTATCAATGGGAATTTCATTATGGCATGTCCACTATAAAAATTGGTTGAATTGACATCAATATAGTAGATTATGTTGTATGAGTTCATCTGTGTCTGCCAAGACGATCTTCATATTTATTGGCTTATCATTCAAGCCGTCAGGTCCATGATTTTGATGATTGTCTCATCCCTAGATCTTTGCTTTTAGTGTACAGAAAAGCTGAAGATATGAACTACCATTCAATCTGCTTGCATGTTCTTGCAGATTCTATCCGCAGGTAAAATATATTTTCCTCTCTCTTCTTCTTTCACTTCTACATGCATGTTTGCTCTTCCAATAACTGCGTGTGAATATGTATGCCTTGTCTGAATATAAATCTTTTAGTGACATGTTTATCTTTGAATCATTTTTGCCAATGGTTCTCAGTGCAGGTCTGATATTGGCATCCTGGTTTTTGTCTCTTGGGTAAACTAACAATGCACAAATCGATCCTTTTTCTCAAGTTGTCTGCTTCAACTCTAATCTCACTTGCAACTTGCATTTCCTCCTTGGCAGGGTTCAAAATGCTGAAGTTTTGTGCTTAGGACTGGTTTCAGTTGCAGTCTTTATGATTGTCATGCCTCTCTTTAGAGCAACCAGTGGTGTTTTACTTCAAATGGCACCGCCTAGCATTCCAACTTCAGCATTAAGTAAATGTTGGAGACAGGTTTGTGCATAAGCATGCATTATATCATGTACCACGGAAGTTGTGAATTAAATTGGACCATGTGGACTTATTTCATATCTGTTTTATATTTTTTTCATTAAGTAGCGAGTTCCTTAACAATTCTTAAAGTTGTTTACATTTCTAAATTTGAAAAATTATGGAACTCTTTGACAATTATTTTGTCCTTTGTTTATAGATAACCGAGAGTACTTTTTATTGTTCATGATGTTACAAGAATGTTCATAGTTTTATACTTTTGACAGATTTCATCCCGTGAAGACATATTAGAAGTCACTCAAGCGCGATTTTGGGAATTAGTACCTGGTCAAGTTGTTGCCTCGCTCACTCTAATGGTAGAGTAACTAGTGTTAAGCATACTTGTATTCAGTCATTTCTAACATTATTATGCATCTGCAATCGTTGATAATCCTTTTAGTTATGATGTTACCTGGTAGTTTCATTCTGTATATTTGATTTTGGGAATTAATATCTGGTCAAGTTGTTGGCTCACTCTCTGCATAATTGTGTTCTGTCATTTCCAACATTGTTATGCATCTGCAATCGTTAATAATCCTTTTTGTTATGTTGTGATATCAACTGGTAGTTTC ATGTGTAGACAGCTATTTCTTTTGTTCCTGTCTTTCTCATTAGCTGTGGAAGCACTCCATGCATTTATACAAGATGAATCTGAACACAAGCACTATTTAATTTTCTCAGCCGTAACAAATTTAATGGTCAATCTTATCGGTGTTTGGTTCTTCAGGAGCTATGCTCGCCTTAATCTTGTGTACAGAAAAGCTGAAGATATGAACTACCATTCAATCTGCTTGCATGTTCTTGCAGATTCTATCCGCAGTGCAGGTCTGATATTGGCATCCTGGTTTTTGTCTCTTGGGGTTCAAAATGCTGAAGTTTTGTGCTTAGGACTGGTTTCAGTTGCAGTCTTTATGATTGTCATGCCTCTCTTTAGAGCAACCAGTGGTGTTTTACTTCAAATGGCACCGCCTAGCATTCCAACTTCAGCATTAAGTAAATGTTGGAGACAGATTTCATCCCGTGAAGACATATTAGAAGTCACTCAAGCGCGATTTTGGGAATTAGTACCTGGTCAAGTTGTTGCCTCGCTCACTCTAATGGTAGAGTAACTAGTGTTAAGCATACTTGTATTCAGTCATTTCTAACATTGTTATGCATCTGCAATCGTTAATAATCCTTTTTGTTATGTTGTGATATCAACTGGTAGTTTC ATGTGTAGACAGCTATTTCTTTTGTTCCTGTCTTTCTCATTAGCTGTGGAAGCACTCCATGCATTTATACAAGATGAATCTGAACACAAGCACTATTTAATTTTCTCAGCCGTAACAAATTTAATGGTCAATCTTATCGGTGTTTGGTTCTTCAGGAGCTATGCTCGCCTTAATCTTGTGTACAGAAAAGCTGAAGATATGAACTACCATTCAATCTGCTTGCATGTTCTTGCAGATTCTATCCGCAGTGCAGGTCTGATATTGGCATCCTGGTTTTTGTCTCTTGGGGTTCAAAATGCTGAAGTTTTGTGCTTAGGACTGGTTTCAGTTGCAGTCTTTATGATTGTCATGCCTCTCTTTAGAGCAACCAGTGGTGTTTTACTTCAAATGGCACCGCCTAGCATTCCAACTTCAGCATTAAGTAAATGTTGGAGACAGATTTCATCCCGTGAAGACATATTAGAAGTCACTCAAGCGCGATTTTGGGAATTAGTACCTGGTCAAGTTGTTGCCTCGCTCACTCTAATGGTAGAGTAA MCRQLFLLFLSFSLAVEALHAFIQDESEHKHYLIFSAVTNLMVNLIGVWFFRSYARLNLVYRKAEDMNYHSICLHVLADSIRSAGLILASWFLSLGVQNAEVLCLGLVSVAVFMIVMPLFRATSGVLLQMAPPSIPTSALSKCWRQISSREDILEVTQARFWELVPGQVVASLTLMVE
BLAST of Carg03575 vs. NCBI nr
Match: XP_023526148.1 (metal tolerance protein C2 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 327.8 bits (839), Expect = 2.3e-86 Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0
BLAST of Carg03575 vs. NCBI nr
Match: XP_022934284.1 (metal tolerance protein C2 isoform X1 [Cucurbita moschata]) HSP 1 Score: 326.2 bits (835), Expect = 6.7e-86 Identity = 170/171 (99.42%), Postives = 170/171 (99.42%), Query Frame = 0
BLAST of Carg03575 vs. NCBI nr
Match: XP_022982981.1 (metal tolerance protein C2 isoform X1 [Cucurbita maxima]) HSP 1 Score: 323.2 bits (827), Expect = 5.7e-85 Identity = 168/171 (98.25%), Postives = 169/171 (98.83%), Query Frame = 0
BLAST of Carg03575 vs. NCBI nr
Match: XP_008443044.1 (PREDICTED: metal tolerance protein C2 [Cucumis melo]) HSP 1 Score: 313.9 bits (803), Expect = 3.4e-82 Identity = 160/171 (93.57%), Postives = 168/171 (98.25%), Query Frame = 0
BLAST of Carg03575 vs. NCBI nr
Match: XP_004136564.1 (PREDICTED: metal tolerance protein C2 [Cucumis sativus] >KGN59295.1 hypothetical protein Csa_3G806270 [Cucumis sativus] >APM86800.1 metal tolerance protein 5 [Cucumis sativus]) HSP 1 Score: 312.8 bits (800), Expect = 7.7e-82 Identity = 158/171 (92.40%), Postives = 168/171 (98.25%), Query Frame = 0
BLAST of Carg03575 vs. TAIR10
Match: AT3G12100.1 (Cation efflux family protein) HSP 1 Score: 286.2 bits (731), Expect = 1.4e-77 Identity = 142/174 (81.61%), Postives = 161/174 (92.53%), Query Frame = 0
BLAST of Carg03575 vs. Swiss-Prot
Match: sp|Q6ICY4|MTPC2_ARATH (Metal tolerance protein C2 OS=Arabidopsis thaliana OX=3702 GN=MTPC2 PE=2 SV=1) HSP 1 Score: 286.2 bits (731), Expect = 2.5e-76 Identity = 142/174 (81.61%), Postives = 161/174 (92.53%), Query Frame = 0
BLAST of Carg03575 vs. Swiss-Prot
Match: sp|Q55E98|Y9332_DICDI (Probable zinc transporter protein DDB_G0269332 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0269332 PE=3 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 1.2e-12 Identity = 48/175 (27.43%), Postives = 92/175 (52.57%), Query Frame = 0
BLAST of Carg03575 vs. Swiss-Prot
Match: sp|Q9JKN1|ZNT7_MOUSE (Zinc transporter 7 OS=Mus musculus OX=10090 GN=Slc30a7 PE=1 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 5.0e-08 Identity = 31/107 (28.97%), Postives = 65/107 (60.75%), Query Frame = 0
BLAST of Carg03575 vs. Swiss-Prot
Match: sp|Q5BJM8|ZNT7_RAT (Zinc transporter 7 OS=Rattus norvegicus OX=10116 GN=Slc30a7 PE=2 SV=2) HSP 1 Score: 59.3 bits (142), Expect = 5.0e-08 Identity = 31/107 (28.97%), Postives = 65/107 (60.75%), Query Frame = 0
BLAST of Carg03575 vs. Swiss-Prot
Match: sp|Q6NRI1|ZNT7B_XENLA (Zinc transporter 7-B OS=Xenopus laevis OX=8355 GN=slc30a7-b PE=2 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 8.5e-08 Identity = 28/107 (26.17%), Postives = 65/107 (60.75%), Query Frame = 0
BLAST of Carg03575 vs. TrEMBL
Match: tr|A0A1S3B7V4|A0A1S3B7V4_CUCME (metal tolerance protein C2 OS=Cucumis melo OX=3656 GN=LOC103486757 PE=4 SV=1) HSP 1 Score: 313.9 bits (803), Expect = 2.3e-82 Identity = 160/171 (93.57%), Postives = 168/171 (98.25%), Query Frame = 0
BLAST of Carg03575 vs. TrEMBL
Match: tr|A0A0A0LBA1|A0A0A0LBA1_CUCSA (Metal tolerance protein 5 OS=Cucumis sativus OX=3659 GN=MTP5 PE=2 SV=1) HSP 1 Score: 312.8 bits (800), Expect = 5.1e-82 Identity = 158/171 (92.40%), Postives = 168/171 (98.25%), Query Frame = 0
BLAST of Carg03575 vs. TrEMBL
Match: tr|V4SVW1|V4SVW1_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10011987mg PE=4 SV=1) HSP 1 Score: 300.1 bits (767), Expect = 3.4e-78 Identity = 150/174 (86.21%), Postives = 164/174 (94.25%), Query Frame = 0
BLAST of Carg03575 vs. TrEMBL
Match: tr|A0A067FU87|A0A067FU87_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g023355mg PE=4 SV=1) HSP 1 Score: 299.3 bits (765), Expect = 5.8e-78 Identity = 150/173 (86.71%), Postives = 163/173 (94.22%), Query Frame = 0
BLAST of Carg03575 vs. TrEMBL
Match: tr|M5VQK2|M5VQK2_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G077600 PE=4 SV=1) HSP 1 Score: 297.4 bits (760), Expect = 2.2e-77 Identity = 148/174 (85.06%), Postives = 165/174 (94.83%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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