Carg03547 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg03547
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	protein FAR1-RELATED SEQUENCE 5
Location	Cucurbita_argyrosperma_scaffold_006 : 599091 .. 602952 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATAACTTTCAGATGGATTTGAGAGATAATAGTGAAAGATGTGTTCTGACAGTGGACGCAGATGCGGGAGAGGAAGGGATAGTGGGAGGATCATTCGAGAGTCCGGCGGGAACAGAATTAATTGAAGGTGATGGAGATATCATCCTTGAGCCTTATGAGGGCATGGAATTTGAGTCTGAAGATGCTGCCAAGATTTTCTATGATAAGTATGCCCGTCAAGTGGGATTTGTTATGCGTGTTATGTCTTGTCGTCGTTCTGAAAAAGATGGGAGGATACTTGCCCGAAGACTTGGATGCAACAAAGAAGGTTACTGTGTCAGCATCCGAGGTAAATTTGGGGCAGTTCGGAAGCCACGGCCAAGCACACGAGAAGGCTGTAAGGCAATGATTCATGTCAAATATGATAAGTCCGGGAAATGGGTGATAACTAAATTTGTAAAGGAACATAATCATCCTCTTGTGGTTTCTCCTCGTGAAGCTCGGCAGACCATGGTGCGTGTTTCTTCTCTTCCCCTACTTTTATCTTCTATCCAACATCATATATTACAATAAGACTGTCATTTGCTAGTATGCTTTCTAGTGAGGCCTAAGAATTAATAGGCTAGAATCTGCGAAGATGTTGTGGAATTTGCGATAATTGGAACATGTTTTGTGGAAACATATTTTGGCTCGTTGAAACCCGGGTTTCTTTAAACAAAGCAAGCTATTTGATGGATCGTTTAGTGAATCAATTTTGTTTTTTAGGGAGATGGAATTGAAAAGATCTTTTCCTCCTATATTGTGCCTTGGAAAACTACCTTTCTGATTGAATGTGGATGTGGATAAGTGGAGGACAGGATGGTTTTTGGTTGTGCATCCGTGCAGTTATGACTGGGCTCAGTGTTTTGTTGGGTTTGTTTTATATGCTCATGGTATTTGCACCATCTAGAATTATTCTGTTTTTGATATTGAAGCCATTGTTTCTTATCTAGAAAAGATAGGCAATTTGTGTATGTAGTTGAGTGTGGTATATCTTAACGTCTCAGATCGATGTTAGGAGAAATTATTTGGAGAGCCCGCCACAATATGACAAATAATTTTGAATGGTTGGTTGTATGAGAGAGAAATTGCTAAAGAAGTAGCGATTTTTCGTGAGAGATAGGAAGACTAGTGGTTCGAGAACTTGATCAATTTTTTAGCATTAAGGATTCTTTATCATTTATAATGTTTACATTAGTTGCAATATAATTAATGGTTTGTTAAAAAAGAAAAACAAAGATGAAGTTTATATGAAGTTTGTACAAAAATTAAATGTCACCTGGCACATCAAAACTGCTATTTTCTCATTTTCCATATTATCTATTCATTATGTTACACTAAATTTCAATTTTAGCAACTCTCACTCCCCAAGCCCACCGCTAGCAGATATTGTCCTTCTTGGGCTTTCCCTCAAGGTTTTTAAAACGTGTCTGCTAGGGAGAGGTTTCTACACCCTTATAAGGAATGCTTCGTTTTCCTCCCCAACCGATGTGGGATCTTACAATCTACTCCCTTCGGAGTCCAGCGTCCTCGTTGGCACTCGTTATCTTTTCTAATCGATGTAGGGTGTAATCATGATTTCAGTCAGTTGTGTTAGGAAGAAACCTGCCCTTTTAACTGACTAAAATGATATATCATTTACTTAGTTTAGCCAGCTATTGAGAACAGAAAGTCCACTTGGGCTAGGCTGCTTGGGTTTCGCAAAGCAAACGTTATATAGGTAATACTTGCTGACTTGTATGGATGAATTAAGGGGGAAAAATCCTGAAAGGAAGCAGAACTCATGCAGGCTAATTGCTTATAAGTAATCAATATTTACTCAATATGGCTGTATGGCCCTTGGCTTCTAGCAACACGATGTCTCCAAACAATTTATGTGACATGCCTGGCTAATTTTTGTTATGAAATTCTTTAGGATGACGTGCCTTTCTTGCTTCTATATCATGGAACAGATTACAATGGCAGAATCTCCTTGACCCTGCCATCCCTCCTGAGCCACCTTCTTCGCCATTTTCGAACTTCCTACATCTCATCTCTGTATCCTCTTTTGTTCCAGCAATTTGGGGTACAGTAACCAGATAGCTATAAACCCAGAACATGGTAACCAGATGACAAATCAATAGAACTATCACTCAGAGTTTACCGGTGACAAAACCCCATTAGTGATGGCTAGGAAAAGTAAAAACTTTTCTTGTTTACTAAATCGAGCTTCCCAGGCATGTCCGTCCCTTCTCAACTATTCCCCACTCTCTATCACTAGGAAAAGTAAAACATTTTGAGTACATGCTAGAGCTTCCCGGGCATGCCACCCCTTTTCAACCAATAACTTATTCCTTCCAACGCCTTGCCCGTTAGTTTTCTAGCCTTCTCGTTGTATAGGTGAATTGAATTGATCTTTTGTATATCCTAACATGTTTTGGTGCTTTCAGTTATGATGCCTAACGTGATATGGTCTCACCTGATCCAATTATCAATTGAAACAATTGAAATGTTTGGAATTTTCGCTCTAACTAAACGGTTGGAACCATTTGGAACACCCACCTAGCATACTTAGTTACTCATGAATAGTATACTATACTAGTTTATCCCTAGTTCGGGGAACTAGTAAACTTCCAAGAGATTGGGGGCTTTTTAACAAAAGATAACTTGAATTGAGAAGATACTAGAATTATTTGTCTGTTGATAGCTAAATCTTTTTTTTGGGTGGTTGACATGTATTTATATTTGTTATATCGTGATTAAAAACCATTGATTTTGGACTTCCCTTATAGGATGAAAAGGATAAACAAATACAGGAACTCACTATAGAGCTGCGGAATAAGAAACGGTTATGCTCCACATACCAAGAACAGCTTGCTGCATTTATGAAAATTGTTGAAGAGCATACCGACCAATTATCCAGAAAAGTTCAAAATGTAGTTACCAACCTTAAAGAGTTTGAGTCCATTGAGCAAGAACTATTGCATCCTAGATAGCCTAGCCACTGAGTGAGTATCTGATTGCTGACTTGACTCTTCTCTTTCACTTTGAGTTTGTTTTTTTTTTTTTTTTAACTGCATCAAAAGTATTTCTTATGCCATGTTCAATTAGATTCTTATGCAGTGCGGTCGGTGGCCATCGAGATTTCGAGGTTGGCAGTGCACGAAGAAGTACGACAACCCAAAAAGGCATTCTTTGCAATATAACCCGCCCCACTCTAAACTTGGAGCGAGCTACAGAAATGAGCATTGCAATATTTCCTCTGTTGTGTATCATAACAGCACTGGCATGAAGTAGAAGCACTTGCAGATATCTGAGCGGAGACACTATTTTTGAATGAAGAGTTAGATTTTATTCACCTCTATAAATAGATTTTATTGATCAACCAACGCAGTTTTTCAGAAAATTTGCTGAAATTTCCATTGCTTGTGTATACTTTTGCATCTGATACTACCACTGAACCATCCAAATCCCATCCTGGATGCCCACCATTTGCTATGGTGAGAAAAAGCAAGAATAAAATTGTTCCATTTTGCTTATTTTATTAGGATTTCTCGTGGTACTTAGGATTTAATATTCTACGAGCTTCTTAGCAACTCATCAGGGTAGGATTGGACGGTTATGTTATGAGAATAGTTGAGTTACATAGCTGGTTCGGACACTCGTCAATATTGAAAAACGTTGTATTGTTTGTGACTTTCATGCATAGAGAGATGTTGTATTGTTTGTGACTTTTATGGTAAATTGAAGGAAGTTTTTCTCCAATCATATATCATAGTATTGAAAAAATTGAAATAAAATTAGGCTTAACTTGCATCATGCATAACAGAGTGAATAAGATATCGCCCGTGAATAAGATATC

mRNA sequence

ATGGATAACTTTCAGATGGATTTGAGAGATAATAGTGAAAGATGTGTTCTGACAGTGGACGCAGATGCGGGAGAGGAAGGGATAGTGGGAGGATCATTCGAGAGTCCGGCGGGAACAGAATTAATTGAAGGTGATGGAGATATCATCCTTGAGCCTTATGAGGGCATGGAATTTGAGTCTGAAGATGCTGCCAAGATTTTCTATGATAAGTATGCCCGTCAAGTGGGATTTGTTATGCGTGTTATGTCTTGTCGTCGTTCTGAAAAAGATGGGAGGATACTTGCCCGAAGACTTGGATGCAACAAAGAAGGTTACTGTGTCAGCATCCGAGGTAAATTTGGGGCAGTTCGGAAGCCACGGCCAAGCACACGAGAAGGCTGTAAGGCAATGATTCATGTCAAATATGATAAGTCCGGGAAATGGGTGATAACTAAATTTGTAAAGGAACATAATCATCCTCTTGTGGTTTCTCCTCGTGAAGCTCGGCAGACCATGGATGAAAAGGATAAACAAATACAGGAACTCACTATAGAGCTGCGGAATAAGAAACGGTTATGCTCCACATACCAAGAACAGCTTGCTGCATTTATGAAAATTGTTGAAGAGCATACCGACCAATTATCCAGAAAAGTTCAAAATGTAGTTACCAACCTTAAAGAGTTTGAGTCCATTGAGCAAGAACTATTGCATCCTAGATAGCCTAGCCACTGAATTCTTATGCAGTGCGGTCGGTGGCCATCGAGATTTCGAGGTTGGCAGTGCACGAAGAAGTACGACAACCCAAAAAGGCATTCTTTGCAATATAACCCGCCCCACTCTAAACTTGGAGCGAGCTACAGAAATGAGCATTGCAATATTTCCTCTGTTGTGTATCATAACAGCACTGGCATGAAGTAGAAGCACTTGCAGATATCTGAGCGGAGACACTATTTTTGAATGAAGAGTTAGATTTTATTCACCTCTATAAATAGATTTTATTGATCAACCAACGCAGTTTTTCAGAAAATTTGCTGAAATTTCCATTGCTTGTGTATACTTTTGCATCTGATACTACCACTGAACCATCCAAATCCCATCCTGGATGCCCACCATTTGCTATGGTGAGAAAAAGCAAGAATAAAATTGTTCCATTTTGCTTATTTTATTAGGATTTCTCGTGGTACTTAGGATTTAATATTCTACGAGCTTCTTAGCAACTCATCAGGGTAGGATTGGACGGTTATGTTATGAGAATAGTTGAGTTACATAGCTGGTTCGGACACTCGTCAATATTGAAAAACGTTGTATTGTTTGTGACTTTCATGCATAGAGAGATGTTGTATTGTTTGTGACTTTTATGGTAAATTGAAGGAAGTTTTTCTCCAATCATATATCATAGTATTGAAAAAATTGAAATAAAATTAGGCTTAACTTGCATCATGCATAACAGAGTGAATAAGATATCGCCCGTGAATAAGATATC

Coding sequence (CDS)

ATGGATAACTTTCAGATGGATTTGAGAGATAATAGTGAAAGATGTGTTCTGACAGTGGACGCAGATGCGGGAGAGGAAGGGATAGTGGGAGGATCATTCGAGAGTCCGGCGGGAACAGAATTAATTGAAGGTGATGGAGATATCATCCTTGAGCCTTATGAGGGCATGGAATTTGAGTCTGAAGATGCTGCCAAGATTTTCTATGATAAGTATGCCCGTCAAGTGGGATTTGTTATGCGTGTTATGTCTTGTCGTCGTTCTGAAAAAGATGGGAGGATACTTGCCCGAAGACTTGGATGCAACAAAGAAGGTTACTGTGTCAGCATCCGAGGTAAATTTGGGGCAGTTCGGAAGCCACGGCCAAGCACACGAGAAGGCTGTAAGGCAATGATTCATGTCAAATATGATAAGTCCGGGAAATGGGTGATAACTAAATTTGTAAAGGAACATAATCATCCTCTTGTGGTTTCTCCTCGTGAAGCTCGGCAGACCATGGATGAAAAGGATAAACAAATACAGGAACTCACTATAGAGCTGCGGAATAAGAAACGGTTATGCTCCACATACCAAGAACAGCTTGCTGCATTTATGAAAATTGTTGAAGAGCATACCGACCAATTATCCAGAAAAGTTCAAAATGTAGTTACCAACCTTAAAGAGTTTGAGTCCATTGAGCAAGAACTATTGCATCCTAGATAG

Protein sequence

MDNFQMDLRDNSERCVLTVDADAGEEGIVGGSFESPAGTELIEGDGDIILEPYEGMEFESEDAAKIFYDKYARQVGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQELLHPR

Homology

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BLAST of Carg03547 vs. NCBI nr
Match: XP_022983095.1 (protein FAR1-RELATED SEQUENCE 5-like isoform X1 [Cucurbita maxima] >XP_022983096.1 protein FAR1-RELATED SEQUENCE 5-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 458.8 bits (1179), Expect = 1.1e-125
Identity = 230/232 (99.14%), Postives = 230/232 (99.14%), Query Frame = 0


Query: 1   MDNFQMDLRDNSERCVLTVDADAGEEGIVGGSFESPAGTELIEGDGDIILEPYEGMEFES 60
           MDNFQMDLRDNSERCVLTVDADA EEGI GGSFESPAGTELIEGDGDIILEPYEGMEFES
Sbjct: 1   MDNFQMDLRDNSERCVLTVDADAVEEGIEGGSFESPAGTELIEGDGDIILEPYEGMEFES 60

Query: 61  EDAAKIFYDKYARQVGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPR 120
           EDAAKIFYDKYARQVGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPR
Sbjct: 61  EDAAKIFYDKYARQVGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPR 120

Query: 121 PSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELR 180
           PSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELR
Sbjct: 121 PSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELR 180

Query: 181 NKKRLCSTYQEQLAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQELLHPR 233
           NKKRLCSTYQEQLAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQELLHPR
Sbjct: 181 NKKRLCSTYQEQLAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQELLHPR 232

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BLAST of Carg03547 vs. NCBI nr
Match: XP_023526121.1 (protein FAR1-RELATED SEQUENCE 5-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023526122.1 protein FAR1-RELATED SEQUENCE 5-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023526123.1 protein FAR1-RELATED SEQUENCE 5-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 451.8 bits (1161), Expect = 1.4e-123
Identity = 226/227 (99.56%), Postives = 226/227 (99.56%), Query Frame = 0


Query: 6   MDLRDNSERCVLTVDADAGEEGIVGGSFESPAGTELIEGDGDIILEPYEGMEFESEDAAK 65
           MDLRDNSERCVLTVDADAGEEGI GGSFESPAGTELIEGDGDIILEPYEGMEFESEDAAK
Sbjct: 1   MDLRDNSERCVLTVDADAGEEGIEGGSFESPAGTELIEGDGDIILEPYEGMEFESEDAAK 60

Query: 66  IFYDKYARQVGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTRE 125
           IFYDKYARQVGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTRE
Sbjct: 61  IFYDKYARQVGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTRE 120

Query: 126 GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRL 185
           GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRL
Sbjct: 121 GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRL 180

Query: 186 CSTYQEQLAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQELLHPR 233
           CSTYQEQLAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQELLHPR
Sbjct: 181 CSTYQEQLAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQELLHPR 227

[Close]

BLAST of Carg03547 vs. NCBI nr
Match: XP_022935696.1 (protein FAR1-RELATED SEQUENCE 5-like isoform X1 [Cucurbita moschata] >XP_022935697.1 protein FAR1-RELATED SEQUENCE 5-like isoform X1 [Cucurbita moschata] >XP_022935698.1 protein FAR1-RELATED SEQUENCE 5-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 449.5 bits (1155), Expect = 6.8e-123
Identity = 225/227 (99.12%), Postives = 225/227 (99.12%), Query Frame = 0


Query: 6   MDLRDNSERCVLTVDADAGEEGIVGGSFESPAGTELIEGDGDIILEPYEGMEFESEDAAK 65
           MDLRDNSERCVLTVDADAGEEGI GGSFESPAGTELIEGDGDIILEPYEGMEFESEDAAK
Sbjct: 1   MDLRDNSERCVLTVDADAGEEGIEGGSFESPAGTELIEGDGDIILEPYEGMEFESEDAAK 60

Query: 66  IFYDKYARQVGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTRE 125
           IFYDKYARQVGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTRE
Sbjct: 61  IFYDKYARQVGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTRE 120

Query: 126 GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRL 185
           GCKAMIHVKYDK GKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRL
Sbjct: 121 GCKAMIHVKYDKFGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRL 180

Query: 186 CSTYQEQLAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQELLHPR 233
           CSTYQEQLAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQELLHPR
Sbjct: 181 CSTYQEQLAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQELLHPR 227

[Close]

BLAST of Carg03547 vs. NCBI nr
Match: XP_022983097.1 (protein FAR1-RELATED SEQUENCE 5-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 448.4 bits (1152), Expect = 1.5e-122
Identity = 225/227 (99.12%), Postives = 225/227 (99.12%), Query Frame = 0


Query: 6   MDLRDNSERCVLTVDADAGEEGIVGGSFESPAGTELIEGDGDIILEPYEGMEFESEDAAK 65
           MDLRDNSERCVLTVDADA EEGI GGSFESPAGTELIEGDGDIILEPYEGMEFESEDAAK
Sbjct: 1   MDLRDNSERCVLTVDADAVEEGIEGGSFESPAGTELIEGDGDIILEPYEGMEFESEDAAK 60

Query: 66  IFYDKYARQVGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTRE 125
           IFYDKYARQVGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTRE
Sbjct: 61  IFYDKYARQVGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTRE 120

Query: 126 GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRL 185
           GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRL
Sbjct: 121 GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRL 180

Query: 186 CSTYQEQLAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQELLHPR 233
           CSTYQEQLAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQELLHPR
Sbjct: 181 CSTYQEQLAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQELLHPR 227

[Close]

BLAST of Carg03547 vs. NCBI nr
Match: XP_022154282.1 (protein FAR1-RELATED SEQUENCE 5 [Momordica charantia])

HSP 1 Score: 443.0 bits (1138), Expect = 6.4e-121
Identity = 222/227 (97.80%), Postives = 223/227 (98.24%), Query Frame = 0


Query: 6   MDLRDNSERCVLTVDADAGEEGIVGGSFESPAGTELIEGDGDIILEPYEGMEFESEDAAK 65
           MDLRDNSERC+LTVDAD GEEGI GGSFESPAGTELIE DGDIILEPYEGMEFESED AK
Sbjct: 1   MDLRDNSERCLLTVDADEGEEGIEGGSFESPAGTELIECDGDIILEPYEGMEFESEDDAK 60

Query: 66  IFYDKYARQVGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTRE 125
           IFYDKYARQVGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTRE
Sbjct: 61  IFYDKYARQVGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTRE 120

Query: 126 GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRL 185
           GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRL
Sbjct: 121 GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRL 180

Query: 186 CSTYQEQLAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQELLHPR 233
           CSTYQEQLAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQELLHPR
Sbjct: 181 CSTYQEQLAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQELLHPR 227

[Close]

BLAST of Carg03547 vs. TAIR10
Match: AT2G43280.1 (Far-red impaired responsive (FAR1) family protein)

HSP 1 Score: 311.2 bits (796), Expect = 5.3e-85
Identity = 149/186 (80.11%), Postives = 170/186 (91.40%), Query Frame = 0


Query: 47  DIILEPYEGMEFESEDAAKIFYDKYARQVGFVMRVMSCRRSEKDGRILARRLGCNKEGYC 106
           D  +EP EG+ FESEDAAK+FYD Y+R++GFVMRVMSCRRSEKDGRILARR GCNKEG+C
Sbjct: 17  DFAIEPREGIIFESEDAAKMFYDDYSRRLGFVMRVMSCRRSEKDGRILARRFGCNKEGHC 76

Query: 107 VSIRGKFGAVRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMD 166
           VSIRGKFG+VRKPRPSTREGCKAMIHVKYD+SGKWVITKFVKEHNHPLVVSPREAR T+D
Sbjct: 77  VSIRGKFGSVRKPRPSTREGCKAMIHVKYDRSGKWVITKFVKEHNHPLVVSPREARHTLD 136

Query: 167 EKDKQIQELTIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQ 226
           EKDK+IQELTIELRNKKRLC+ Y+EQL AF KIVEEH++Q+++KV+NVV NLKEFE +E 
Sbjct: 137 EKDKRIQELTIELRNKKRLCAAYKEQLDAFAKIVEEHSNQIAKKVENVVNNLKEFEHLEH 196

Query: 227 ELLHPR 233
            LL  +
Sbjct: 197 ALLRSK 202

[Close]

BLAST of Carg03547 vs. TAIR10
Match: AT3G07500.1 (Far-red impaired responsive (FAR1) family protein)

HSP 1 Score: 173.3 bits (438), Expect = 1.7e-43
Identity = 93/181 (51.38%), Postives = 129/181 (71.27%), Query Frame = 0


Query: 49  ILEPYEGMEFESEDAAKIFYDKYARQVGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVS 108
           ++EP+ GMEFESE+AAK FYD YA  +GFVMRV + RRS +DG ++ RRL CNKEG+  S
Sbjct: 30  MVEPFIGMEFESEEAAKSFYDNYATCMGFVMRVDAFRRSMRDGTVVWRRLVCNKEGFRRS 89

Query: 109 IRGKFGAVRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLV-VSPREAR----- 168
            R +    RKPR  TREGCKA+I VK +KSG W++TKF KEHNHPL+ +SP   R     
Sbjct: 90  -RPRRSESRKPRAITREGCKALIVVKREKSGTWLVTKFEKEHNHPLLPLSPNVRRNFQLP 149

Query: 169 QTMDEKDKQIQELTIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLSRKVQNVVTNLKEFE 224
           QT DEKD +I+EL+ EL  ++R C+  Q+QL   +K +EEH++ L+  + +V+ ++++ E
Sbjct: 150 QTPDEKDAKIRELSAELSRERRRCTALQQQLDMVLKEMEEHSNHLTININSVIQSVRDIE 209

[Close]

BLAST of Carg03547 vs. TAIR10
Match: AT4G12850.1 (Far-red impaired responsive (FAR1) family protein)

HSP 1 Score: 159.8 bits (403), Expect = 2.0e-39
Identity = 83/178 (46.63%), Postives = 124/178 (69.66%), Query Frame = 0


Query: 46  GDIIL-EPYEGMEFESEDAAKIFYDKYARQVGFVMRVMSCRRSEKDGRILARRLGCNKEG 105
           GD+ L EPY G++FESE+ AK FY +Y++++GFV+R+M  RRS  DGR LARRLGCNK+G
Sbjct: 3   GDLKLDEPYVGLKFESEEEAKDFYVEYSKRLGFVVRMMQRRRSGIDGRTLARRLGCNKQG 62

Query: 106 YCVSIRGKFGAVRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQT 165
           +  + +             REGCKA I VK +KSGKWV+T+F+KEHNH L      +  +
Sbjct: 63  FGPNNQ----XXXXXXXXXREGCKATILVKMEKSGKWVVTRFIKEHNHSLQFIGSSSYDS 122

Query: 166 MDEKDKQIQELTIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLSRKVQNVVTNLKEFE 223
             +K+++I+ELT E+  + RLC  Y+++L +F+  VE +T++LS KV+++V N+K+ E
Sbjct: 123 FADKERKIKELTEEIECQDRLCDVYRDRLVSFIDNVEHYTEELSLKVRDIVENVKKLE 176

[Close]

BLAST of Carg03547 vs. TAIR10
Match: AT3G59470.1 (Far-red impaired responsive (FAR1) family protein)

HSP 1 Score: 146.7 bits (369), Expect = 1.7e-35
Identity = 88/200 (44.00%), Postives = 120/200 (60.00%), Query Frame = 0


Query: 37  AGTELIEGDGDIILEPYEGMEFESEDAAKIFYDKYARQVGFVMRVMSCRRSEKDGRILAR 96
           A  ++ E  GD   EPY G EFESE AA  FY+ YA +VGFV+RV    RS  DG  + R
Sbjct: 58  AVADMTEAQGD---EPYVGQEFESEAAAHGFYNAYATKVGFVIRVSKLSRSRHDGSPIGR 117

Query: 97  RLGCNKEGYCVSIRGKFGAVRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVV 156
           +L CNKEGY   +  K   V + R  TR GCKAMI ++ + SGKWVITKFVKEHNH L+ 
Sbjct: 118 QLVCNKEGY--RLPSKRDKVIRQRAETRVGCKAMILIRKENSGKWVITKFVKEHNHSLM- 177

Query: 157 SPREAR------QTMDEKDKQIQELTIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLSRK 216
            P   R      Q  +E DK IQEL  +L  +K+  +TY+  L    + +E+H + LS++
Sbjct: 178 -PGRVRRGCIYDQYPNEHDK-IQELMQQLAAEKKRAATYKRHLEMLFEQIEQHNESLSKR 237

Query: 217 VQNVVTNLKEFESIEQELLH 231
           +Q++V N++  E  + +  H
Sbjct: 238 IQHIVDNVRNLEQRDHQQNH 249

[Close]

BLAST of Carg03547 vs. TAIR10
Match: AT4G38180.1 (FAR1-related sequence 5)

HSP 1 Score: 116.7 bits (291), Expect = 1.9e-26
Identity = 73/186 (39.25%), Postives = 102/186 (54.84%), Query Frame = 0


Query: 50  LEPYEGMEFESEDAAKIFYDKYARQVGFVMRVMSCRRSEKDGRILARRLGCNKEGY--CV 109
           LEPY+G+EFESE+AAK FY+ YAR++GF  RV S RRS +DG I+ R+  C KEG+    
Sbjct: 71  LEPYDGLEFESEEAAKAFYNSYARRIGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNMN 130

Query: 110 SIRGKFGAVRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSP-----REAR 169
             R K   +++PR  TR GCKA + VK   SGKW+++ FVK+HNH LV        R  R
Sbjct: 131 EKRTKDREIKRPRTITRVGCKASLSVKMQDSGKWLVSGFVKDHNHELVPPDQVHCLRSHR 190

Query: 170 QTMDEKDKQIQELTIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLSRKVQNVVTNLKEFE 229
           Q        I  L       +R+ S   ++     K+     D      +N + N ++ +
Sbjct: 191 QISGPAKTLIDTLQAAGMGPRRIMSALIKEYGGISKVGFTEVD-----CRNYMRNNRQ-K 250

[Close]

BLAST of Carg03547 vs. Swiss-Prot
Match: sp|Q9SZL8|FRS5_ARATH (Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=FRS5 PE=1 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 3.4e-25
Identity = 73/186 (39.25%), Postives = 102/186 (54.84%), Query Frame = 0


Query: 50  LEPYEGMEFESEDAAKIFYDKYARQVGFVMRVMSCRRSEKDGRILARRLGCNKEGY--CV 109
           LEPY+G+EFESE+AAK FY+ YAR++GF  RV S RRS +DG I+ R+  C KEG+    
Sbjct: 71  LEPYDGLEFESEEAAKAFYNSYARRIGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNMN 130

Query: 110 SIRGKFGAVRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSP-----REAR 169
             R K   +++PR  TR GCKA + VK   SGKW+++ FVK+HNH LV        R  R
Sbjct: 131 EKRTKDREIKRPRTITRVGCKASLSVKMQDSGKWLVSGFVKDHNHELVPPDQVHCLRSHR 190

Query: 170 QTMDEKDKQIQELTIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLSRKVQNVVTNLKEFE 229
           Q        I  L       +R+ S   ++     K+     D      +N + N ++ +
Sbjct: 191 QISGPAKTLIDTLQAAGMGPRRIMSALIKEYGGISKVGFTEVD-----CRNYMRNNRQ-K 250

[Close]

BLAST of Carg03547 vs. Swiss-Prot
Match: sp|Q9M8J3|FRS7_ARATH (Protein FAR1-RELATED SEQUENCE 7 OS=Arabidopsis thaliana OX=3702 GN=FRS7 PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.7e-16
Identity = 46/124 (37.10%), Postives = 69/124 (55.65%), Query Frame = 0


Query: 41  LIEGDGDIILEPYEGMEFESEDAAKIFYDKYARQVGFVMRVMSCRRSEKDGRILARRLGC 100
           + E +GD  LEPY G+EF++ + A+ +Y+ YA + GF +R     RS  DG + +RR  C
Sbjct: 17  IAENEGDSGLEPYVGLEFDTAEEARDYYNSYATRTGFKVRTGQLYRSRTDGTVSSRRFVC 76

Query: 101 NKEGYCVSIRGKFGAVRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPRE 160
           +KEG+              + ++R GC A I V+   +GKWV+ +  KEHNH L     E
Sbjct: 77  SKEGF--------------QLNSRTGCPAFIRVQRRDTGKWVLDQIQKEHNHDLGGHIEE 126

Query: 161 ARQT 165
           A+ T
Sbjct: 137 AQTT 126

[Close]

BLAST of Carg03547 vs. Swiss-Prot
Match: sp|Q9SWG3|FAR1_ARATH (Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=FAR1 PE=1 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 3.8e-16
Identity = 52/161 (32.30%), Postives = 86/161 (53.42%), Query Frame = 0


Query: 6   MDLRDNSERCVLTVDADAGEEGIVGGSFESPAGTEL-------IEGD----GDIILEPYE 65
           MDL++N       + +DAG++ +V    E  +  ++       I GD    GD+ LEP  
Sbjct: 1   MDLQEN-------LVSDAGDDHMVDIVVEPHSNRDIGIVDEFNIGGDVGFSGDLDLEPRN 60

Query: 66  GMEFESEDAAKIFYDKYARQVGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFG 125
           G++F++ +AA IFY +YA+ +GF   + + RRS+K    +  +  C++ G         G
Sbjct: 61  GIDFDTHEAAYIFYQEYAKSMGFTTSIKNSRRSKKTKDFIDAKFACSRYGVTPESESS-G 120

Query: 126 AVRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLV 156
           +  +     +  CKA +HVK    GKW+I +FVK+HNH L+
Sbjct: 121 SSSRRSTVKKTDCKASMHVKRRPDGKWIIHEFVKDHNHELL 153

[Close]

BLAST of Carg03547 vs. Swiss-Prot
Match: sp|Q3EBQ3|FRS2_ARATH (Protein FAR1-RELATED SEQUENCE 2 OS=Arabidopsis thaliana OX=3702 GN=FRS2 PE=1 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 8.5e-16
Identity = 57/162 (35.19%), Postives = 91/162 (56.17%), Query Frame = 0


Query: 49  ILEPYEGMEFESEDAAKIFYDKYARQVGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVS 108
           + E   GM+FES++AA  FY +YAR VGF + + + RRS++ G+ +  ++ C++ G   +
Sbjct: 35  VSELRNGMDFESKEAAYYFYREYARSVGFGITIKASRRSKRSGKFIDVKIACSRFG---T 94

Query: 109 IRGKFGAVRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEK 168
            R K  A+  PR   + GCKA +H+K  +  KWVI  FVKEHNH   + P +   ++  K
Sbjct: 95  KREKATAI-NPRSCPKTGCKAGLHMKRKEDEKWVIYNFVKEHNHE--ICPDDFYVSVRGK 154

Query: 169 DKQIQELTIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLSRK 211
           +K    L I    KK L    +E+    +K++ EH  ++  K
Sbjct: 155 NKPAGALAI----KKGLQLALEEE---DLKLLLEHFMEMQDK 183

[Close]

BLAST of Carg03547 vs. Swiss-Prot
Match: sp|Q9LIE5|FHY3_ARATH (Protein FAR-RED ELONGATED HYPOCOTYL 3 OS=Arabidopsis thaliana OX=3702 GN=FHY3 PE=1 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.2e-14
Identity = 51/141 (36.17%), Postives = 68/141 (48.23%), Query Frame = 0


Query: 36  PAGTELIEGDGDIILEPYEGMEFESEDAAKIFYDKYARQVGFVMRVMSCRRSEKDGRILA 95
           P G EL+E    + LEP  GMEFES   A  FY +Y+R +GF   + + RRS+     + 
Sbjct: 55  PTG-ELVEYTEGMNLEPLNGMEFESHGEAYSFYQEYSRAMGFNTAIQNSRRSKTTREFID 114

Query: 96  RRLGCNKEG----YCVSIRGKFGAVRKPRPSTREG--------CKAMIHVKYDKSGKWVI 155
            +  C++ G    Y  S         K  P    G        CKA +HVK    GKWVI
Sbjct: 115 AKFACSRYGTKREYDKSFNRPRARQSKQDPENMAGRRTCAKTDCKASMHVKRRPDGKWVI 174

Query: 156 TKFVKEHNHPLVVSPREARQT 165
             FV+EHNH L+ +   + QT
Sbjct: 175 HSFVREHNHELLPAQAVSEQT 194

[Close]

BLAST of Carg03547 vs. TrEMBL
Match: tr|A0A1S3B7B4|A0A1S3B7B4_CUCME (protein FAR1-RELATED SEQUENCE 5 OS=Cucumis melo OX=3656 GN=LOC103486797 PE=4 SV=1)

HSP 1 Score: 427.2 bits (1097), Expect = 2.4e-116
Identity = 215/227 (94.71%), Postives = 219/227 (96.48%), Query Frame = 0


Query: 6   MDLRDNSERCVLTVDADAGEEGIVGGSFESPAGTELIEGDGDIILEPYEGMEFESEDAAK 65
           MDLRDNSERC+L VDAD GEEGI GGS ESPAGTEL + DGDIILEPYEGMEFESEDAAK
Sbjct: 1   MDLRDNSERCLLAVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAK 60

Query: 66  IFYDKYARQVGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTRE 125
           IFYDKYARQ+GFVMRVMSCRRSEKDGRILARRLGCNKEG+CVSIRGKFGAVRKPRPSTRE
Sbjct: 61  IFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTRE 120

Query: 126 GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRL 185
           GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVS REARQTMDEKDKQIQELTIELRNKKRL
Sbjct: 121 GCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSAREARQTMDEKDKQIQELTIELRNKKRL 180

Query: 186 CSTYQEQLAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQELLHPR 233
           CSTYQEQLAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQELLH R
Sbjct: 181 CSTYQEQLAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQELLHLR 227

[Close]

BLAST of Carg03547 vs. TrEMBL
Match: tr|A0A0A0LBE0|A0A0A0LBE0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G811580 PE=4 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 2.0e-110
Identity = 204/217 (94.01%), Postives = 210/217 (96.77%), Query Frame = 0


Query: 16  VLTVDADAGEEGIVGGSFESPAGTELIEGDGDIILEPYEGMEFESEDAAKIFYDKYARQV 75
           ++ VDAD GEE I GGS ESPAGTEL + DGDIILEPYEGMEFESEDAAKIFYDKYARQ+
Sbjct: 67  LINVDADEGEEVIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAKIFYDKYARQL 126

Query: 76  GFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTREGCKAMIHVKY 135
           GFVMRVMSCRRSEKDGRILARRLGCNKEG+CVSIRGKFGAVRKPRPSTREGCKAMIHVKY
Sbjct: 127 GFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTREGCKAMIHVKY 186

Query: 136 DKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRLCSTYQEQLAA 195
           DKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRLCSTYQEQLAA
Sbjct: 187 DKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRLCSTYQEQLAA 246

Query: 196 FMKIVEEHTDQLSRKVQNVVTNLKEFESIEQELLHPR 233
           FMKIVEEHTDQLS+KVQNVVTNLKEFESIEQELLHPR
Sbjct: 247 FMKIVEEHTDQLSKKVQNVVTNLKEFESIEQELLHPR 283

[Close]

BLAST of Carg03547 vs. TrEMBL
Match: tr|A0A2P5ESY1|A0A2P5ESY1_9ROSA (Uncharacterized protein (Fragment) OS=Trema orientalis OX=63057 GN=TorRG33x02_155640 PE=4 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 9.2e-92
Identity = 172/215 (80.00%), Postives = 193/215 (89.77%), Query Frame = 0


Query: 18  TVDADAGEEGIVGGSFESPAGTELIEGDGDIILEPYEGMEFESEDAAKIFYDKYARQVGF 77
           ++D D G      G+ ES AG EL+  +GD  LEPYEGMEF+SEDAAKIFYD+YARQVGF
Sbjct: 71  SMDLDEG-----AGAVESSAGQELVTYEGDANLEPYEGMEFDSEDAAKIFYDEYARQVGF 130

Query: 78  VMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTREGCKAMIHVKYDK 137
           VMRVMSCRRSE+DGRILARRLGCNKEG+CVSIRGKFG VRKPRPSTREGCKAMIHVKYDK
Sbjct: 131 VMRVMSCRRSERDGRILARRLGCNKEGHCVSIRGKFGPVRKPRPSTREGCKAMIHVKYDK 190

Query: 138 SGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRLCSTYQEQLAAFM 197
           SGKWVITKFVKEHNHPLV SPREARQTMDEKDK+IQELT ELRNKKRLC+TYQEQL+AF+
Sbjct: 191 SGKWVITKFVKEHNHPLVFSPREARQTMDEKDKKIQELTAELRNKKRLCTTYQEQLSAFI 250

Query: 198 KIVEEHTDQLSRKVQNVVTNLKEFESIEQELLHPR 233
           +IVEEH+++LS+KVQNVV+NLKEFE I+Q+L   R
Sbjct: 251 RIVEEHSNELSKKVQNVVSNLKEFEPIDQDLSQHR 280

[Close]

BLAST of Carg03547 vs. TrEMBL
Match: tr|A0A2P5CSI0|A0A2P5CSI0_PARAD (FHY3/FAR1 family OS=Parasponia andersonii OX=3476 GN=PanWU01x14_127670 PE=4 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 1.2e-91
Identity = 171/215 (79.53%), Postives = 194/215 (90.23%), Query Frame = 0


Query: 18  TVDADAGEEGIVGGSFESPAGTELIEGDGDIILEPYEGMEFESEDAAKIFYDKYARQVGF 77
           ++D D G      G+ ES AG EL+  +GD ILEP+EGMEF+SEDAAKIFYD+YARQVGF
Sbjct: 76  SMDLDEG-----AGAVESSAGQELVTYEGDAILEPFEGMEFDSEDAAKIFYDEYARQVGF 135

Query: 78  VMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTREGCKAMIHVKYDK 137
           VMRVMSCRRSE+DGRILARRLGCNKEG+CVSIRGKFG VRKPRPSTREGCKAMIHVKYDK
Sbjct: 136 VMRVMSCRRSERDGRILARRLGCNKEGHCVSIRGKFGPVRKPRPSTREGCKAMIHVKYDK 195

Query: 138 SGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRLCSTYQEQLAAFM 197
           SGKWVITKFVKEHNHPLV SPREARQTMDEKDK+IQELT ELRNKKRLC+TYQEQL+AF+
Sbjct: 196 SGKWVITKFVKEHNHPLVFSPREARQTMDEKDKKIQELTAELRNKKRLCTTYQEQLSAFI 255

Query: 198 KIVEEHTDQLSRKVQNVVTNLKEFESIEQELLHPR 233
           +IVEEH+++LS+KVQNVV+NLK+FE I+Q+L   R
Sbjct: 256 RIVEEHSNELSKKVQNVVSNLKKFEPIDQDLSQHR 285

[Close]

BLAST of Carg03547 vs. TrEMBL
Match: tr|W9RFJ0|W9RFJ0_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_012164 PE=4 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 1.7e-90
Identity = 172/214 (80.37%), Postives = 190/214 (88.79%), Query Frame = 0


Query: 19  VDADAGEEGIVGGSFESPAGTELIEGDGDIILEPYEGMEFESEDAAKIFYDKYARQVGFV 78
           VD+D G      G+ ES A   L+  +GD ILEP EGMEF+SEDAAKIFYD+YAR++GFV
Sbjct: 22  VDSDEG-----AGAVESSAVHPLVPYEGDTILEPCEGMEFDSEDAAKIFYDEYARRLGFV 81

Query: 79  MRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTREGCKAMIHVKYDKS 138
           MRVMSCRRSE+DGRILARRLGCNKEGYCVSIRGKFG VRKPRPSTREGCKAMIHVKYDKS
Sbjct: 82  MRVMSCRRSERDGRILARRLGCNKEGYCVSIRGKFGPVRKPRPSTREGCKAMIHVKYDKS 141

Query: 139 GKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRLCSTYQEQLAAFMK 198
           GKWVITKFVK+HNHPLVVS REARQTMDEKDK+IQELT+ELRNKKRLCSTYQEQL AF+K
Sbjct: 142 GKWVITKFVKDHNHPLVVSTREARQTMDEKDKKIQELTVELRNKKRLCSTYQEQLTAFIK 201

Query: 199 IVEEHTDQLSRKVQNVVTNLKEFESIEQELLHPR 233
           IVEEH+DQLS+KVQNVV+NLKE E I+Q+L   R
Sbjct: 202 IVEEHSDQLSKKVQNVVSNLKEIEPIDQDLSQRR 230

The following BLAST results are available for this feature:

BLAST of Carg03547 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022983095.1	1.1e-125	99.14	protein FAR1-RELATED SEQUENCE 5-like isoform X1 [Cucurbita maxima] >XP_022983096...	[more]
XP_023526121.1	1.4e-123	99.56	protein FAR1-RELATED SEQUENCE 5-like isoform X1 [Cucurbita pepo subsp. pepo] >XP...	[more]
XP_022935696.1	6.8e-123	99.12	protein FAR1-RELATED SEQUENCE 5-like isoform X1 [Cucurbita moschata] >XP_0229356...	[more]
XP_022983097.1	1.5e-122	99.12	protein FAR1-RELATED SEQUENCE 5-like isoform X2 [Cucurbita maxima]	[more]
XP_022154282.1	6.4e-121	97.80	protein FAR1-RELATED SEQUENCE 5 [Momordica charantia]	[more]

BLAST of Carg03547 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G43280.1	5.3e-85	80.11	Far-red impaired responsive (FAR1) family protein	[more]
AT3G07500.1	1.7e-43	51.38	Far-red impaired responsive (FAR1) family protein	[more]
AT4G12850.1	2.0e-39	46.63	Far-red impaired responsive (FAR1) family protein	[more]
AT3G59470.1	1.7e-35	44.00	Far-red impaired responsive (FAR1) family protein	[more]
AT4G38180.1	1.9e-26	39.25	FAR1-related sequence 5	[more]

BLAST of Carg03547 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SZL8\|FRS5_ARATH	3.4e-25	39.25	Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=FRS5 PE=1 SV=...	[more]
sp\|Q9M8J3\|FRS7_ARATH	1.7e-16	37.10	Protein FAR1-RELATED SEQUENCE 7 OS=Arabidopsis thaliana OX=3702 GN=FRS7 PE=2 SV=...	[more]
sp\|Q9SWG3\|FAR1_ARATH	3.8e-16	32.30	Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=FAR1 PE=1...	[more]
sp\|Q3EBQ3\|FRS2_ARATH	8.5e-16	35.19	Protein FAR1-RELATED SEQUENCE 2 OS=Arabidopsis thaliana OX=3702 GN=FRS2 PE=1 SV=...	[more]
sp\|Q9LIE5\|FHY3_ARATH	1.2e-14	36.17	Protein FAR-RED ELONGATED HYPOCOTYL 3 OS=Arabidopsis thaliana OX=3702 GN=FHY3 PE...	[more]

BLAST of Carg03547 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B7B4\|A0A1S3B7B4_CUCME	2.4e-116	94.71	protein FAR1-RELATED SEQUENCE 5 OS=Cucumis melo OX=3656 GN=LOC103486797 PE=4 SV=...	[more]
tr\|A0A0A0LBE0\|A0A0A0LBE0_CUCSA	2.0e-110	94.01	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G811580 PE=4 SV=1	[more]
tr\|A0A2P5ESY1\|A0A2P5ESY1_9ROSA	9.2e-92	80.00	Uncharacterized protein (Fragment) OS=Trema orientalis OX=63057 GN=TorRG33x02_15...	[more]
tr\|A0A2P5CSI0\|A0A2P5CSI0_PARAD	1.2e-91	79.53	FHY3/FAR1 family OS=Parasponia andersonii OX=3476 GN=PanWU01x14_127670 PE=4 SV=1	[more]
tr\|W9RFJ0\|W9RFJ0_9ROSA	1.7e-90	80.37	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_012164 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR031052	FHY3/FAR1
IPR004330	FAR1_DNA_bnd_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg03547-RA	Carg03547-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 165..192
None	No IPR available	PANTHER	PTHR31669:SF46	FAR-RED IMPAIRED RESPONSIVE 1-LIKE PROTEIN	coord: 29..230
IPR004330	FAR1 DNA binding domain	PFAM	PF03101	FAR1	coord: 67..155 e-value: 6.1E-29 score: 100.5
IPR031052	FHY3/FAR1 family	PANTHER	PTHR31669	FAMILY NOT NAMED	coord: 29..230

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg03547	Cla017511	Watermelon (97103) v1	carwmB0237
Carg03547	Csa3G811580	Cucumber (Chinese Long) v2	carcuB0276
Carg03547	ClCG10G017250	Watermelon (Charleston Gray)	carwcgB0240
Carg03547	CSPI03G36810	Wild cucumber (PI 183967)	carcpiB0280
Carg03547	Cucsa.242980	Cucumber (Gy14) v1	carcgyB0294
Carg03547	CmaCh06G000790	Cucurbita maxima (Rimu)	carcmaB0349
Carg03547	CmoCh06G000710	Cucurbita moschata (Rifu)	carcmoB0350
Carg03547	CmoCh14G004480	Cucurbita moschata (Rifu)	carcmoB0347
Carg03547	Lsi03G017040	Bottle gourd (USVL1VR-Ls)	carlsiB225
Carg03547	Cp4.1LG08g13910	Cucurbita pepo (Zucchini)	carcpeB0355
Carg03547	Cp4.1LG03g03750	Cucurbita pepo (Zucchini)	carcpeB0353
Carg03547	CsGy3G034230	Cucumber (Gy14) v2	carcgybB0263
Carg03547	CsaV3_3G039150	Cucumber (Chinese Long) v3	carcucB0279
Carg03547	Cla97C10G200080	Watermelon (97103) v2	carwmbB0254
Carg03547	Bhi11G002227	Wax gourd	carwgoB0320

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg03547	Carg01245	Silver-seed gourd	carcarB182

The following block(s) are covering this gene:


Gene	Organism	Block
Carg03547	Melon (DHL92) v3.5.1	carmeB0251
Carg03547	Melon (DHL92) v3.6.1	carmedB0261
Carg03547	Silver-seed gourd	carcarB288
Carg03547	Cucurbita maxima (Rimu)	carcmaB0343
Carg03547	Cucurbita maxima (Rimu)	carcmaB0344