Carg03537 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.CTCTGCGGCCCCGTCTTCTCCCATTCCGCTTTCTTGCGTTTCTTACTCACTCCTCTCTCCTCCACCCTTTGTTTCCAGAGGGTGTGGGAGATCTCCGTGCAGGTCAGCTGAATCAATTCGATTGCGCTTTGTTTATCGCTGATCTCGTCTTTAATCGCTAACCCCATGTGATTGTTCTTTTGATCTGGGTGTTTCTTCGTTTTGTTTTTTATTTTTTCATTCTGGGTTTTGTTTGTTTGTTCTTGTTGTGTTCATATCTGGTTCAGATGCCATCGAAGCTTTGATCTGATTGGGACATGCCACTTTGTGGTTTATTGTTGATCCTTTTATTGGTGATCTATAAATGTTTTGGACTTGTTCTATCTCATTTGTATGCGTTCTTACTGTGTACTTGAAGTTTGATATTGTAGTTCATCCATTATTTCCAGGAGAATCTAGCAACTTGGATATGGGTAATTGTTAGGCTAAGCAAATCTCCCAATTTAGAATTGATATCAATGCTTGATTACAGCAGCCGATATCGTCCAGTGCTAACAAAACAATGAGATTTGTTCTCTGGATTGTTCTTCCACATCTGAGATTTGGACTACAGCAGCTGACTTAATCTTAAAGAGCATACTGATTATAATTTTGAGGGTGGAAGAAGAATGCATTGTTCTTGGTAAAAAAACATGGATTGTCTCTTGTCAGAAGTTTTAAGGGAGTACTTTTGTCATTCATGTCTCCTAAACGATGTTTGCATCGGCATCGAGAAACTGAAATAGAAGAGCATCCTTGCTCATGGAATTCTCTAATGTGTGGTTATGTGGTGAAGATCAGTGACTGAACTTACATTGCCATGCTCAAAGGATTCTGTGAGATGAAGATCTAAGATGTTTGTTTGAGTGGCGATGTAAGGTCTAGCAAAGGGGAAAAATGCAAGAAAATACATTAAGAAATAGCTCATATTGTTTTGCTTGCATTGAATTTTATAAGTCTGTTCACGTATCTTTTATTTTCTTGTTTTCCACTGATTTATCACCATTGTACTCTGTTTGACACCCCTGTTTTCTCTCTTCTTGCAGTGAATTCTTGTGGCATATCCAGAGTTCAGATTCAGTAATTTAAAATCTGTCAGTTTCTCTTGAAAACTAAAGAGACAGTAGCAGAGAAATATTCTCCAATGTCTAGCTCTGCCAAAGCCTTGGATCCTGCATTTCAGGCAGTTGGACAAAGAGTGTATCCTTAGAAAACTTCGAAACTTGTTCGTCTGGAAAATAATGTTCTGTAATTCATTCGAGATTAGAGCTGTATACTTGTCGTGTTATTTGGATACTCATAATATGGAAGTGCGATTCGATAGAATATTTGACTGTAGTTTCTTGTATGTGATGGATTATATTTAGAGCATGTCTCAGAAGTTTTAGATGTTGAACTTAATTTCCTGTAGTGGAACAGAAATCTGGCGAATTGAGAACTTTCAGCCTGTTCCGTTGCCAAAGTCGGACCATGGGAAATTTTACATGGGGGATAGTTACATAATACTGCAGGCATTTCATTCTAGTTCTTCTCGTCTTTAA CTCTGCGGCCCCGTCTTCTCCCATTCCGCTTTCTTGCGTTTCTTACTCACTCCTCTCTCCTCCACCCTTTGTTTCCAGAGGGTGTGGGAGATCTCCGTGCAGTTTCTCTTGAAAACTAAAGAGACAGTAGCAGAGAAATATTCTCCAATGTCTAGCTCTGCCAAAGCCTTGGATCCTGCATTTCAGGCAGTTGGACAAAGAGTTGGAACAGAAATCTGGCGAATTGAGAACTTTCAGCCTGTTCCGTTGCCAAAGTCGGACCATGGGAAATTTTACATGGGGGATAGTTACATAATACTGCAGGCATTTCATTCTAGTTCTTCTCGTCTTTAA CTCTGCGGCCCCGTCTTCTCCCATTCCGCTTTCTTGCGTTTCTTACTCACTCCTCTCTCCTCCACCCTTTGTTTCCAGAGGGTGTGGGAGATCTCCGTGCAGTTTCTCTTGAAAACTAAAGAGACAGTAGCAGAGAAATATTCTCCAATGTCTAGCTCTGCCAAAGCCTTGGATCCTGCATTTCAGGCAGTTGGACAAAGAGTTGGAACAGAAATCTGGCGAATTGAGAACTTTCAGCCTGTTCCGTTGCCAAAGTCGGACCATGGGAAATTTTACATGGGGGATAGTTACATAATACTGCAGGCATTTCATTCTAGTTCTTCTCGTCTTTAA LCGPVFSHSAFLRFLLTPLSSTLCFQRVWEISVQFLLKTKETVAEKYSPMSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQAFHSSSSRL
BLAST of Carg03537 vs. NCBI nr
Match: XP_022935422.1 (villin-3-like [Cucurbita moschata]) HSP 1 Score: 111.3 bits (277), Expect = 2.1e-21 Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0
BLAST of Carg03537 vs. NCBI nr
Match: XP_022982830.1 (villin-3-like [Cucurbita maxima]) HSP 1 Score: 109.0 bits (271), Expect = 1.0e-20 Identity = 51/52 (98.08%), Postives = 52/52 (100.00%), Query Frame = 0
BLAST of Carg03537 vs. NCBI nr
Match: XP_007145600.1 (hypothetical protein PHAVU_007G252400g [Phaseolus vulgaris] >ESW17594.1 hypothetical protein PHAVU_007G252400g [Phaseolus vulgaris]) HSP 1 Score: 108.2 bits (269), Expect = 1.8e-20 Identity = 50/52 (96.15%), Postives = 50/52 (96.15%), Query Frame = 0
BLAST of Carg03537 vs. NCBI nr
Match: XP_017414590.1 (PREDICTED: villin-3-like isoform X2 [Vigna angularis] >KOM34199.1 hypothetical protein LR48_Vigan02g034900 [Vigna angularis]) HSP 1 Score: 108.2 bits (269), Expect = 1.8e-20 Identity = 50/52 (96.15%), Postives = 50/52 (96.15%), Query Frame = 0
BLAST of Carg03537 vs. NCBI nr
Match: XP_014513542.1 (villin-3 isoform X1 [Vigna radiata var. radiata] >XP_022640594.1 villin-3 isoform X1 [Vigna radiata var. radiata]) HSP 1 Score: 108.2 bits (269), Expect = 1.8e-20 Identity = 50/52 (96.15%), Postives = 50/52 (96.15%), Query Frame = 0
BLAST of Carg03537 vs. TAIR10
Match: AT3G57410.1 (villin 3) HSP 1 Score: 96.3 bits (238), Expect = 1.3e-20 Identity = 41/52 (78.85%), Postives = 47/52 (90.38%), Query Frame = 0
BLAST of Carg03537 vs. TAIR10
Match: AT2G41740.1 (villin 2) HSP 1 Score: 88.6 bits (218), Expect = 2.6e-18 Identity = 37/49 (75.51%), Postives = 43/49 (87.76%), Query Frame = 0
BLAST of Carg03537 vs. TAIR10
Match: AT4G30160.2 (villin 4) HSP 1 Score: 77.8 bits (190), Expect = 4.7e-15 Identity = 34/52 (65.38%), Postives = 40/52 (76.92%), Query Frame = 0
BLAST of Carg03537 vs. TAIR10
Match: AT5G57320.1 (villin, putative) HSP 1 Score: 73.2 bits (178), Expect = 1.1e-13 Identity = 33/61 (54.10%), Postives = 42/61 (68.85%), Query Frame = 0
BLAST of Carg03537 vs. TAIR10
Match: AT2G29890.3 (villin-like 1) HSP 1 Score: 58.9 bits (141), Expect = 2.2e-09 Identity = 25/54 (46.30%), Postives = 37/54 (68.52%), Query Frame = 0
BLAST of Carg03537 vs. Swiss-Prot
Match: sp|O81645|VILI3_ARATH (Villin-3 OS=Arabidopsis thaliana OX=3702 GN=VLN3 PE=1 SV=2) HSP 1 Score: 96.3 bits (238), Expect = 2.3e-19 Identity = 41/52 (78.85%), Postives = 47/52 (90.38%), Query Frame = 0
BLAST of Carg03537 vs. Swiss-Prot
Match: sp|O81644|VILI2_ARATH (Villin-2 OS=Arabidopsis thaliana OX=3702 GN=VLN2 PE=1 SV=2) HSP 1 Score: 88.6 bits (218), Expect = 4.8e-17 Identity = 37/49 (75.51%), Postives = 43/49 (87.76%), Query Frame = 0
BLAST of Carg03537 vs. Swiss-Prot
Match: sp|Q10L71|VLN2_ORYSJ (Villin-2 OS=Oryza sativa subsp. japonica OX=39947 GN=VLN2 PE=2 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 6.2e-17 Identity = 38/52 (73.08%), Postives = 46/52 (88.46%), Query Frame = 0
BLAST of Carg03537 vs. Swiss-Prot
Match: sp|B8ATT7|VLN4_ORYSI (Villin-4 OS=Oryza sativa subsp. indica OX=39946 GN=VLN4 PE=3 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 5.3e-16 Identity = 37/52 (71.15%), Postives = 44/52 (84.62%), Query Frame = 0
BLAST of Carg03537 vs. Swiss-Prot
Match: sp|Q0JAD9|VLN4_ORYSJ (Villin-4 OS=Oryza sativa subsp. japonica OX=39947 GN=VLN4 PE=3 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 5.3e-16 Identity = 37/52 (71.15%), Postives = 44/52 (84.62%), Query Frame = 0
BLAST of Carg03537 vs. TrEMBL
Match: tr|A0A1S3V5S8|A0A1S3V5S8_VIGRR (villin-3-like isoform X1 OS=Vigna radiata var. radiata OX=3916 GN=LOC106771972 PE=4 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 1.2e-20 Identity = 50/52 (96.15%), Postives = 50/52 (96.15%), Query Frame = 0
BLAST of Carg03537 vs. TrEMBL
Match: tr|A0A1S3V5B3|A0A1S3V5B3_VIGRR (villin-3-like isoform X2 OS=Vigna radiata var. radiata OX=3916 GN=LOC106771972 PE=4 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 1.2e-20 Identity = 50/52 (96.15%), Postives = 50/52 (96.15%), Query Frame = 0
BLAST of Carg03537 vs. TrEMBL
Match: tr|A0A0L9TVI9|A0A0L9TVI9_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan02g034900 PE=4 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 1.2e-20 Identity = 50/52 (96.15%), Postives = 50/52 (96.15%), Query Frame = 0
BLAST of Carg03537 vs. TrEMBL
Match: tr|A0A0S3SU61|A0A0S3SU61_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.08G328900 PE=4 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 1.2e-20 Identity = 50/52 (96.15%), Postives = 50/52 (96.15%), Query Frame = 0
BLAST of Carg03537 vs. TrEMBL
Match: tr|V7BI54|V7BI54_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_007G252400g PE=4 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 1.2e-20 Identity = 50/52 (96.15%), Postives = 50/52 (96.15%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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