Carg03537 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg03537
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Villin
Location	Cucurbita_argyrosperma_scaffold_006 : 543123 .. 544681 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTGCGGCCCCGTCTTCTCCCATTCCGCTTTCTTGCGTTTCTTACTCACTCCTCTCTCCTCCACCCTTTGTTTCCAGAGGGTGTGGGAGATCTCCGTGCAGGTCAGCTGAATCAATTCGATTGCGCTTTGTTTATCGCTGATCTCGTCTTTAATCGCTAACCCCATGTGATTGTTCTTTTGATCTGGGTGTTTCTTCGTTTTGTTTTTTATTTTTTCATTCTGGGTTTTGTTTGTTTGTTCTTGTTGTGTTCATATCTGGTTCAGATGCCATCGAAGCTTTGATCTGATTGGGACATGCCACTTTGTGGTTTATTGTTGATCCTTTTATTGGTGATCTATAAATGTTTTGGACTTGTTCTATCTCATTTGTATGCGTTCTTACTGTGTACTTGAAGTTTGATATTGTAGTTCATCCATTATTTCCAGGAGAATCTAGCAACTTGGATATGGGTAATTGTTAGGCTAAGCAAATCTCCCAATTTAGAATTGATATCAATGCTTGATTACAGCAGCCGATATCGTCCAGTGCTAACAAAACAATGAGATTTGTTCTCTGGATTGTTCTTCCACATCTGAGATTTGGACTACAGCAGCTGACTTAATCTTAAAGAGCATACTGATTATAATTTTGAGGGTGGAAGAAGAATGCATTGTTCTTGGTAAAAAAACATGGATTGTCTCTTGTCAGAAGTTTTAAGGGAGTACTTTTGTCATTCATGTCTCCTAAACGATGTTTGCATCGGCATCGAGAAACTGAAATAGAAGAGCATCCTTGCTCATGGAATTCTCTAATGTGTGGTTATGTGGTGAAGATCAGTGACTGAACTTACATTGCCATGCTCAAAGGATTCTGTGAGATGAAGATCTAAGATGTTTGTTTGAGTGGCGATGTAAGGTCTAGCAAAGGGGAAAAATGCAAGAAAATACATTAAGAAATAGCTCATATTGTTTTGCTTGCATTGAATTTTATAAGTCTGTTCACGTATCTTTTATTTTCTTGTTTTCCACTGATTTATCACCATTGTACTCTGTTTGACACCCCTGTTTTCTCTCTTCTTGCAGTGAATTCTTGTGGCATATCCAGAGTTCAGATTCAGTAATTTAAAATCTGTCAGTTTCTCTTGAAAACTAAAGAGACAGTAGCAGAGAAATATTCTCCAATGTCTAGCTCTGCCAAAGCCTTGGATCCTGCATTTCAGGCAGTTGGACAAAGAGTGTATCCTTAGAAAACTTCGAAACTTGTTCGTCTGGAAAATAATGTTCTGTAATTCATTCGAGATTAGAGCTGTATACTTGTCGTGTTATTTGGATACTCATAATATGGAAGTGCGATTCGATAGAATATTTGACTGTAGTTTCTTGTATGTGATGGATTATATTTAGAGCATGTCTCAGAAGTTTTAGATGTTGAACTTAATTTCCTGTAGTGGAACAGAAATCTGGCGAATTGAGAACTTTCAGCCTGTTCCGTTGCCAAAGTCGGACCATGGGAAATTTTACATGGGGGATAGTTACATAATACTGCAGGCATTTCATTCTAGTTCTTCTCGTCTTTAA

mRNA sequence

CTCTGCGGCCCCGTCTTCTCCCATTCCGCTTTCTTGCGTTTCTTACTCACTCCTCTCTCCTCCACCCTTTGTTTCCAGAGGGTGTGGGAGATCTCCGTGCAGTTTCTCTTGAAAACTAAAGAGACAGTAGCAGAGAAATATTCTCCAATGTCTAGCTCTGCCAAAGCCTTGGATCCTGCATTTCAGGCAGTTGGACAAAGAGTTGGAACAGAAATCTGGCGAATTGAGAACTTTCAGCCTGTTCCGTTGCCAAAGTCGGACCATGGGAAATTTTACATGGGGGATAGTTACATAATACTGCAGGCATTTCATTCTAGTTCTTCTCGTCTTTAA

Coding sequence (CDS)

CTCTGCGGCCCCGTCTTCTCCCATTCCGCTTTCTTGCGTTTCTTACTCACTCCTCTCTCCTCCACCCTTTGTTTCCAGAGGGTGTGGGAGATCTCCGTGCAGTTTCTCTTGAAAACTAAAGAGACAGTAGCAGAGAAATATTCTCCAATGTCTAGCTCTGCCAAAGCCTTGGATCCTGCATTTCAGGCAGTTGGACAAAGAGTTGGAACAGAAATCTGGCGAATTGAGAACTTTCAGCCTGTTCCGTTGCCAAAGTCGGACCATGGGAAATTTTACATGGGGGATAGTTACATAATACTGCAGGCATTTCATTCTAGTTCTTCTCGTCTTTAA

Protein sequence

LCGPVFSHSAFLRFLLTPLSSTLCFQRVWEISVQFLLKTKETVAEKYSPMSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQAFHSSSSRL

Homology

[Close]

BLAST of Carg03537 vs. NCBI nr
Match: XP_022935422.1 (villin-3-like [Cucurbita moschata])

HSP 1 Score: 111.3 bits (277), Expect = 2.1e-21
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0


Query: 50  MSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ 102
           MSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ
Sbjct: 1   MSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ 52

[Close]

BLAST of Carg03537 vs. NCBI nr
Match: XP_022982830.1 (villin-3-like [Cucurbita maxima])

HSP 1 Score: 109.0 bits (271), Expect = 1.0e-20
Identity = 51/52 (98.08%), Postives = 52/52 (100.00%), Query Frame = 0


Query: 50  MSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ 102
           MSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSD+GKFYMGDSYIILQ
Sbjct: 1   MSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDYGKFYMGDSYIILQ 52

[Close]

BLAST of Carg03537 vs. NCBI nr
Match: XP_007145600.1 (hypothetical protein PHAVU_007G252400g [Phaseolus vulgaris] >ESW17594.1 hypothetical protein PHAVU_007G252400g [Phaseolus vulgaris])

HSP 1 Score: 108.2 bits (269), Expect = 1.8e-20
Identity = 50/52 (96.15%), Postives = 50/52 (96.15%), Query Frame = 0


Query: 50  MSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ 102
           MSSSAK LDPAFQ VGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ
Sbjct: 1   MSSSAKVLDPAFQGVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ 52

[Close]

BLAST of Carg03537 vs. NCBI nr
Match: XP_017414590.1 (PREDICTED: villin-3-like isoform X2 [Vigna angularis] >KOM34199.1 hypothetical protein LR48_Vigan02g034900 [Vigna angularis])

HSP 1 Score: 108.2 bits (269), Expect = 1.8e-20
Identity = 50/52 (96.15%), Postives = 50/52 (96.15%), Query Frame = 0


Query: 50  MSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ 102
           MSSSAK LDPAFQ VGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ
Sbjct: 1   MSSSAKVLDPAFQGVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ 52

[Close]

BLAST of Carg03537 vs. NCBI nr
Match: XP_014513542.1 (villin-3 isoform X1 [Vigna radiata var. radiata] >XP_022640594.1 villin-3 isoform X1 [Vigna radiata var. radiata])

HSP 1 Score: 108.2 bits (269), Expect = 1.8e-20
Identity = 50/52 (96.15%), Postives = 50/52 (96.15%), Query Frame = 0


Query: 50  MSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ 102
           MSSSAK LDPAFQ VGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ
Sbjct: 1   MSSSAKVLDPAFQGVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ 52

[Close]

BLAST of Carg03537 vs. TAIR10
Match: AT3G57410.1 (villin 3)

HSP 1 Score: 96.3 bits (238), Expect = 1.3e-20
Identity = 41/52 (78.85%), Postives = 47/52 (90.38%), Query Frame = 0


Query: 50  MSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ 102
           MS S K LDPAFQ VGQ+ GTEIWRIENF+PVP+PKS+HGKFYMGD+YI+LQ
Sbjct: 1   MSGSTKVLDPAFQGVGQKPGTEIWRIENFEPVPVPKSEHGKFYMGDTYIVLQ 52

[Close]

BLAST of Carg03537 vs. TAIR10
Match: AT2G41740.1 (villin 2)

HSP 1 Score: 88.6 bits (218), Expect = 2.6e-18
Identity = 37/49 (75.51%), Postives = 43/49 (87.76%), Query Frame = 0


Query: 53  SAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ 102
           S K LDPAFQ  GQ+ GTEIWRIENF+ VP+PKS+HGKFYMGD+YI+LQ
Sbjct: 2   STKVLDPAFQGAGQKPGTEIWRIENFEAVPVPKSEHGKFYMGDTYIVLQ 50

[Close]

BLAST of Carg03537 vs. TAIR10
Match: AT4G30160.2 (villin 4)

HSP 1 Score: 77.8 bits (190), Expect = 4.7e-15
Identity = 34/52 (65.38%), Postives = 40/52 (76.92%), Query Frame = 0


Query: 50  MSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ 102
           MS S + LDPAFQ  GQ+ G EIWRIENF P P+PKS  GKF+ GDSYI+L+
Sbjct: 1   MSVSMRDLDPAFQGAGQKAGIEIWRIENFIPTPIPKSSIGKFFTGDSYIVLK 52

[Close]

BLAST of Carg03537 vs. TAIR10
Match: AT5G57320.1 (villin, putative)

HSP 1 Score: 73.2 bits (178), Expect = 1.1e-13
Identity = 33/61 (54.10%), Postives = 42/61 (68.85%), Query Frame = 0


Query: 50  MSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQAFHSSSSR 109
           M+ S + LD A Q  GQ+ G EIWRIENF+PV +P+  HGKF+ GDSYI+L+   S S  
Sbjct: 1   MTFSMRDLDQALQGAGQKSGIEIWRIENFKPVTVPQESHGKFFTGDSYIVLKTTASRSGS 60

Query: 110 L 111
           L
Sbjct: 61  L 61

[Close]

BLAST of Carg03537 vs. TAIR10
Match: AT2G29890.3 (villin-like 1)

HSP 1 Score: 58.9 bits (141), Expect = 2.2e-09
Identity = 25/54 (46.30%), Postives = 37/54 (68.52%), Query Frame = 0


Query: 50  MSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQAF 104
           MS  +K +D AFQ VG + G EIW + N Q + +PKS  GKF+ G++Y++L+ F
Sbjct: 1   MSRLSKDIDSAFQGVGTKSGLEIWCVYNKQLISIPKSSFGKFHSGNAYLVLRTF 54

[Close]

BLAST of Carg03537 vs. Swiss-Prot
Match: sp|O81645|VILI3_ARATH (Villin-3 OS=Arabidopsis thaliana OX=3702 GN=VLN3 PE=1 SV=2)

HSP 1 Score: 96.3 bits (238), Expect = 2.3e-19
Identity = 41/52 (78.85%), Postives = 47/52 (90.38%), Query Frame = 0


Query: 50  MSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ 102
           MS S K LDPAFQ VGQ+ GTEIWRIENF+PVP+PKS+HGKFYMGD+YI+LQ
Sbjct: 1   MSGSTKVLDPAFQGVGQKPGTEIWRIENFEPVPVPKSEHGKFYMGDTYIVLQ 52

[Close]

BLAST of Carg03537 vs. Swiss-Prot
Match: sp|O81644|VILI2_ARATH (Villin-2 OS=Arabidopsis thaliana OX=3702 GN=VLN2 PE=1 SV=2)

HSP 1 Score: 88.6 bits (218), Expect = 4.8e-17
Identity = 37/49 (75.51%), Postives = 43/49 (87.76%), Query Frame = 0


Query: 53  SAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ 102
           S K LDPAFQ  GQ+ GTEIWRIENF+ VP+PKS+HGKFYMGD+YI+LQ
Sbjct: 2   STKVLDPAFQGAGQKPGTEIWRIENFEAVPVPKSEHGKFYMGDTYIVLQ 50

[Close]

BLAST of Carg03537 vs. Swiss-Prot
Match: sp|Q10L71|VLN2_ORYSJ (Villin-2 OS=Oryza sativa subsp. japonica OX=39947 GN=VLN2 PE=2 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 6.2e-17
Identity = 38/52 (73.08%), Postives = 46/52 (88.46%), Query Frame = 0


Query: 50  MSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ 102
           MSS+   LDPAFQ VGQ+ GTEIWRI++F+PVPLPK+D+GKFY GDSYI+LQ
Sbjct: 1   MSSAKPVLDPAFQGVGQKPGTEIWRIQDFKPVPLPKADYGKFYNGDSYIVLQ 52

[Close]

BLAST of Carg03537 vs. Swiss-Prot
Match: sp|B8ATT7|VLN4_ORYSI (Villin-4 OS=Oryza sativa subsp. indica OX=39946 GN=VLN4 PE=3 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 5.3e-16
Identity = 37/52 (71.15%), Postives = 44/52 (84.62%), Query Frame = 0


Query: 50  MSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ 102
           MS S K +DPAF+ VGQ+ G E+WRIENF+PVP+P S HGKFYMGDSYIIL+
Sbjct: 1   MSISMKDVDPAFRGVGQKDGLEVWRIENFKPVPVPTSSHGKFYMGDSYIILK 52

[Close]

BLAST of Carg03537 vs. Swiss-Prot
Match: sp|Q0JAD9|VLN4_ORYSJ (Villin-4 OS=Oryza sativa subsp. japonica OX=39947 GN=VLN4 PE=3 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 5.3e-16
Identity = 37/52 (71.15%), Postives = 44/52 (84.62%), Query Frame = 0


Query: 50  MSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ 102
           MS S K +DPAF+ VGQ+ G E+WRIENF+PVP+P S HGKFYMGDSYIIL+
Sbjct: 1   MSISMKDVDPAFRGVGQKDGLEVWRIENFKPVPVPTSSHGKFYMGDSYIILK 52

[Close]

BLAST of Carg03537 vs. TrEMBL
Match: tr|A0A1S3V5S8|A0A1S3V5S8_VIGRR (villin-3-like isoform X1 OS=Vigna radiata var. radiata OX=3916 GN=LOC106771972 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.2e-20
Identity = 50/52 (96.15%), Postives = 50/52 (96.15%), Query Frame = 0


Query: 50  MSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ 102
           MSSSAK LDPAFQ VGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ
Sbjct: 1   MSSSAKVLDPAFQGVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ 52

[Close]

BLAST of Carg03537 vs. TrEMBL
Match: tr|A0A1S3V5B3|A0A1S3V5B3_VIGRR (villin-3-like isoform X2 OS=Vigna radiata var. radiata OX=3916 GN=LOC106771972 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.2e-20
Identity = 50/52 (96.15%), Postives = 50/52 (96.15%), Query Frame = 0


Query: 50  MSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ 102
           MSSSAK LDPAFQ VGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ
Sbjct: 1   MSSSAKVLDPAFQGVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ 52

[Close]

BLAST of Carg03537 vs. TrEMBL
Match: tr|A0A0L9TVI9|A0A0L9TVI9_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan02g034900 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.2e-20
Identity = 50/52 (96.15%), Postives = 50/52 (96.15%), Query Frame = 0


Query: 50  MSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ 102
           MSSSAK LDPAFQ VGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ
Sbjct: 1   MSSSAKVLDPAFQGVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ 52

[Close]

BLAST of Carg03537 vs. TrEMBL
Match: tr|A0A0S3SU61|A0A0S3SU61_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.08G328900 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.2e-20
Identity = 50/52 (96.15%), Postives = 50/52 (96.15%), Query Frame = 0


Query: 50  MSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ 102
           MSSSAK LDPAFQ VGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ
Sbjct: 1   MSSSAKVLDPAFQGVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ 52

[Close]

BLAST of Carg03537 vs. TrEMBL
Match: tr|V7BI54|V7BI54_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_007G252400g PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.2e-20
Identity = 50/52 (96.15%), Postives = 50/52 (96.15%), Query Frame = 0


Query: 50  MSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ 102
           MSSSAK LDPAFQ VGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ
Sbjct: 1   MSSSAKVLDPAFQGVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ 52

The following BLAST results are available for this feature:

BLAST of Carg03537 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022935422.1	2.1e-21	100.00	villin-3-like [Cucurbita moschata]	[more]
XP_022982830.1	1.0e-20	98.08	villin-3-like [Cucurbita maxima]	[more]
XP_007145600.1	1.8e-20	96.15	hypothetical protein PHAVU_007G252400g [Phaseolus vulgaris] >ESW17594.1 hypothet...	[more]
XP_017414590.1	1.8e-20	96.15	PREDICTED: villin-3-like isoform X2 [Vigna angularis] >KOM34199.1 hypothetical p...	[more]
XP_014513542.1	1.8e-20	96.15	villin-3 isoform X1 [Vigna radiata var. radiata] >XP_022640594.1 villin-3 isofor...	[more]

BLAST of Carg03537 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G57410.1	1.3e-20	78.85	villin 3	[more]
AT2G41740.1	2.6e-18	75.51	villin 2	[more]
AT4G30160.2	4.7e-15	65.38	villin 4	[more]
AT5G57320.1	1.1e-13	54.10	villin, putative	[more]
AT2G29890.3	2.2e-09	46.30	villin-like 1	[more]

BLAST of Carg03537 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O81645\|VILI3_ARATH	2.3e-19	78.85	Villin-3 OS=Arabidopsis thaliana OX=3702 GN=VLN3 PE=1 SV=2	[more]
sp\|O81644\|VILI2_ARATH	4.8e-17	75.51	Villin-2 OS=Arabidopsis thaliana OX=3702 GN=VLN2 PE=1 SV=2	[more]
sp\|Q10L71\|VLN2_ORYSJ	6.2e-17	73.08	Villin-2 OS=Oryza sativa subsp. japonica OX=39947 GN=VLN2 PE=2 SV=1	[more]
sp\|B8ATT7\|VLN4_ORYSI	5.3e-16	71.15	Villin-4 OS=Oryza sativa subsp. indica OX=39946 GN=VLN4 PE=3 SV=1	[more]
sp\|Q0JAD9\|VLN4_ORYSJ	5.3e-16	71.15	Villin-4 OS=Oryza sativa subsp. japonica OX=39947 GN=VLN4 PE=3 SV=1	[more]

BLAST of Carg03537 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3V5S8\|A0A1S3V5S8_VIGRR	1.2e-20	96.15	villin-3-like isoform X1 OS=Vigna radiata var. radiata OX=3916 GN=LOC106771972 P...	[more]
tr\|A0A1S3V5B3\|A0A1S3V5B3_VIGRR	1.2e-20	96.15	villin-3-like isoform X2 OS=Vigna radiata var. radiata OX=3916 GN=LOC106771972 P...	[more]
tr\|A0A0L9TVI9\|A0A0L9TVI9_PHAAN	1.2e-20	96.15	Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan02g034900 PE...	[more]
tr\|A0A0S3SU61\|A0A0S3SU61_PHAAN	1.2e-20	96.15	Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.08G...	[more]
tr\|V7BI54\|V7BI54_PHAVU	1.2e-20	96.15	Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_007G252400g PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0051015	actin filament binding

Vocabulary: **INTERPRO**
Term	Definition
IPR007122	Villin/Gelsolin
IPR029006	ADF-H/Gelsolin-like_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0051015	actin filament binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg03537-RA	Carg03537-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029006	ADF-H/Gelsolin-like domain superfamily	GENE3D	G3DSA:3.40.20.10		coord: 55..110 e-value: 1.1E-15 score: 59.4
None	No IPR available	PANTHER	PTHR11977:SF81	SEVERIN	coord: 50..106
None	No IPR available	SUPERFAMILY	SSF55753	Actin depolymerizing proteins	coord: 58..107
IPR007122	Villin/Gelsolin	PANTHER	PTHR11977	VILLIN	coord: 50..106

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg03537	Silver-seed gourd	carcarB182
Carg03537	Silver-seed gourd	carcarB288
Carg03537	Cucumber (Gy14) v2	carcgybB0263
Carg03537	Cucumber (Gy14) v1	carcgyB0296
Carg03537	Cucurbita maxima (Rimu)	carcmaB0343
Carg03537	Cucurbita maxima (Rimu)	carcmaB0344
Carg03537	Cucurbita maxima (Rimu)	carcmaB0349
Carg03537	Cucurbita moschata (Rifu)	carcmoB0347
Carg03537	Cucurbita moschata (Rifu)	carcmoB0350
Carg03537	Cucurbita pepo (Zucchini)	carcpeB0353
Carg03537	Cucurbita pepo (Zucchini)	carcpeB0355
Carg03537	Wild cucumber (PI 183967)	carcpiB0280
Carg03537	Cucumber (Chinese Long) v2	carcuB0276
Carg03537	Cucumber (Chinese Long) v3	carcucB0279
Carg03537	Bottle gourd (USVL1VR-Ls)	carlsiB225
Carg03537	Melon (DHL92) v3.5.1	carmeB0251
Carg03537	Melon (DHL92) v3.6.1	carmedB0261
Carg03537	Watermelon (Charleston Gray)	carwcgB0240
Carg03537	Watermelon (97103) v1	carwmB0237
Carg03537	Watermelon (97103) v2	carwmbB0254
Carg03537	Wax gourd	carwgoB0320