Carg03446 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg03446
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	MADS box transcription factor AGAMOUS
Location	Cucurbita_argyrosperma_scaffold_005 : 1919236 .. 1922608 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

CATACCCTTCACCAAAATCTGATCCCCCTTTTCTGTTGGTGTTCTTCCCTCAAAGTTGAGCTCACCCAGGTTTGTTTTCTTGAAAATCTTGAAACCCCATCTTCAAAGTTTGAATCTTTAGGTGATTTTGTGGCAGATCTAGTGACCAAAACCAAAACCCATGTCTTATTTTTGTGTGTTCTTTGGTTCAGATTTCAGCCACGGAGTTCCCAAGCCAAGCTGGAGAAGGATCTGCCTCTTCCCACAAAAAAATGGGAAGAGGTAAGATTGAAATTAAACGAATTGAAAATACCACAAATCGTCAAGTCACCTTTTGCAAGAGAAGAAATGGTTTGCTTAAAAAAGCCTACGAGTTGTCTGTTCTTTGTGATGCTGAAGTTGCCCTCATCGTCTTCTCCACTCGTGGCCGTCTCTATGAATATGCCAATAACAGGTTTCACAACTTCAAATTCTTCCTTCAAACACCAAAAAAAATTAATCATTTCTATCTCAGCTGCACAGATCTATGGTTAAAGCTTAGGGTTTAACCTTTATTATTATTATTATTTTTTTTTTTTTGAGGAAATTAATGAATCCATGTTTTTAGGGTTTTTGTTGCCTAAAAATGTCATCCATCTATAATCCGTCACCCTAAGCTGTCTGCCCCAGATGATGGTGTCATCGCCCTCATTATTTCCATTTTTTCACCCTTTTTTCATTACTTTTAATGTTCTTGCTCAACTTCGCTTGCAAAAATCTGATTTTTTTCAAATGGGTTTGTTAGATAGCGTTTGATTTTATCTGGGTTTTTGTTTTTCTTCTTAATTTGTTTTTCTAAGCTTTCAATTTATTATTTTAGCCTCCGATCTTAACAGAATTGCTACAATTCAATTACCGGTGAGCTATGCTCGTTACTTTTTTTTCTTGATAATCAACTCAATTTTTCTTTTTATATGATATTTGCTTTGAATCTTTAGGGTTTAATACAAAACATAATTAATTTCTTATTTAGAGTAGAAATTAATGAATTTCCCACACAAATGATCAAATTATGACCAAAAATTTTAAAAATTAAAAAAAAAAATTGAGAATGGATGAATAGTAATTAGAATAATTAAAAAGATGGAAAATAGTATTTTTTGTGAGTTGTACAATAATTAAATGAATAATATTAATACCATTTTCTTGCAATGTGGAAGGACCATTCTGCCCTCTCAAACTTTAATTTGTAGCATAGAAATAGAAAAAGTTGGTAAATAGCTTCCTCTTCTTCATATTTTCATCCTTTCAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATACCAATTTAGCTTCAGTCAACTCACTACTGATATTCATATTAATCAAATCCGACAAGAAATTATTGTATTTTCATTATTATTATTATTTTGGGGAAATTTGAAAAATCCCATTTGAAATATTATTGATTTTAGGTTTGGGAGAGTGGAAGGGAAAGTGTGTGTAATTCATTTTCTTTTGCAATGCAAGAGAGAATCATTCTATTTCTATGAAACTTCGATCCTCTCCCCCTTATCACTAATTTAGACCCTTTTTTCCCCTCTCCTTTTAATCATTTTCAAACCCATCAGACCCATTTATGATGCCTCTCATTGATGCAAACAAATAGCTTAAAATCTTTCCACAAGAGCGTCTCGATAAGACGTTTTGTTAGATCTCACCTCCGTTGTAGAGTTTAACTTTCGTTTTAAAATTGTGAAGCTTACGTTGGGCTAAAATAGACAATATTTACTAACAGTATTAAGCTTGAAATTTACGGTTTACGGGTATCTAGGAAGCTTAAATGTAAGAAAATCGTGTTTTAGGGTATAGATTTGTCCGAGAATTGAAGTGATTGAGGAAGAAATTAGGGTTTTGAGTGAGGAGGATTTAGAATTTAGGGTTTCGGGTTTTCGGGTTTCGGGGGAAAATGGAGATTAGGGATTAGGGTAATAGAAAAATGAAGAGAAATATAAAATAATGTGGGATGTTTGTTCACACTGCAATCATGGTCGAGGAAATTAAGGTATCACATGCCACCACCCATGTTCTTGGAATCCCTCGTGTCGGTTTTATTAGGTGTGATTCTCTTTCTTTTAATATATAATATTATATAATATTAAAGTATTTATATAATTATATTTAACATAATGTTTTTAGTTTATCATTAAATTTGTGGGTAATATATTTGTGAATGAATGGTTAAAAATTGAGTACAATTTTTACAGTGTTAGAGGAACCATTGAAAGGTACAAGAAAGCATTTGCTGACTCTTCCAATTCTGGATTATCAGTGGCAGAAGCTAATGTACAGGTAATTACATGTTTTTTTTTTGTTTTTTTTTTATTTTAAGGAACAAAAAAGTTAAAAACACAGATGAACAATTAAATATGAATTTTTTTTTTTTACAGTTTTACCAGCAAGAAGCATCGAAGCTGAAGAGACAGATCCGGGAGATTCAAAACTCGAACAGGTTCGGTTCCGAAAAACACAACAACAAAAAAAGTAACTTTTGTATGAATTTACAGTGTTAATTTCATCTTGCTCAGGCATATTCTTGGTGAAGCACTCAGCTCATTGTCTTTAAAGGACCTGAAAAGCTTGGAGGGCAGATTGGAGAGAGGAATCAGCAAAGTTAGGGCTAAAAAGGTCTCTCCTTTTACTCTATTTCTTCGACGTATTGATATAATTAGATTCAATTCATTACAATCGAGCGTAAGAAAGTCTTTGTGTTCGAATCCCGTAATGTTGTTTTTGCTACGACCCATATTCTAACTCTCCACGTTTCGTGTTAAAATTGTATATATTCATGCGTTTGAGTTCAATAGTGATTTAAAATCTATTCGCATTCAAAATTGACCGTTTTGATTGTGTGTAGAACGAAACCTTGTGTGCAGAGATGGAATTCATGCAAAAAAGGGTACGTATATAACACACAATATATACGAGACTATTTGGAATGATTGTTCAGATACTTAAAAAAAAACGTTTGACTTTTTCTCGGTGTAGGAAATGGAGCTTCAGAATCACAACAACTATCTTCGAGCACAGGTCAAATTCTTCACCTTTTCTCCTCGATAACACAAATCCCTCGAAAAGAAAATACTCAATTTATTTCGATTATGTTGATACGTAACATTATTTATAACATCATTCACGTAAATTTAGTTCGGTTTTAATAGATTGCTGAACACGAAAGAATACAACAACAGCAACAACAGCAACAAACGAACATGATGCAAAGGGGAACGTATGAGACAGTGGGAGGAGGGCAGTACGAGGAGAACAGAAGCTATGGCGGCGTGGGGCTTATGGATTCGGACACCCATTACGCCCATCAAGACCATCTCACTGCCCTTCAGCTCGTTTAA

mRNA sequence

CATACCCTTCACCAAAATCTGATCCCCCTTTTCTGTTGGTGTTCTTCCCTCAAAGTTGAGCTCACCCAGATTTCAGCCACGGAGTTCCCAAGCCAAGCTGGAGAAGGATCTGCCTCTTCCCACAAAAAAATGGGAAGAGCCTACGAGTTGTCTGTTCTTTGTGATGCTGAAGTTGCCCTCATCGTCTTCTCCACTCGTGGCCGTCTCTATGAATATGCCAATAACAGTGTTAGAGGAACCATTGAAAGGTACAAGAAAGCATTTGCTGACTCTTCCAATTCTGGATTATCAGTGGCAGAAGCTAATGTACAGTTTTACCAGCAAGAAGCATCGAAGCTGAAGAGACAGATCCGGGAGATTCAAAACTCGAACAGGCATATTCTTGGTGAAGCACTCAGCTCATTGTCTTTAAAGGACCTGAAAAGCTTGGAGGGCAGATTGGAGAGAGGAATCAGCAAAGTTAGGGCTAAAAAGGAAATGGAGCTTCAGAATCACAACAACTATCTTCGAGCACAGATTGCTGAACACGAAAGAATACAACAACAGCAACAACAGCAACAAACGAACATGATGCAAAGGGGAACGTATGAGACAGTGGGAGGAGGGCAGTACGAGGAGAACAGAAGCTATGGCGGCGTGGGGCTTATGGATTCGGACACCCATTACGCCCATCAAGACCATCTCACTGCCCTTCAGCTCGTTTAA

Coding sequence (CDS)

CATACCCTTCACCAAAATCTGATCCCCCTTTTCTGTTGGTGTTCTTCCCTCAAAGTTGAGCTCACCCAGATTTCAGCCACGGAGTTCCCAAGCCAAGCTGGAGAAGGATCTGCCTCTTCCCACAAAAAAATGGGAAGAGCCTACGAGTTGTCTGTTCTTTGTGATGCTGAAGTTGCCCTCATCGTCTTCTCCACTCGTGGCCGTCTCTATGAATATGCCAATAACAGTGTTAGAGGAACCATTGAAAGGTACAAGAAAGCATTTGCTGACTCTTCCAATTCTGGATTATCAGTGGCAGAAGCTAATGTACAGTTTTACCAGCAAGAAGCATCGAAGCTGAAGAGACAGATCCGGGAGATTCAAAACTCGAACAGGCATATTCTTGGTGAAGCACTCAGCTCATTGTCTTTAAAGGACCTGAAAAGCTTGGAGGGCAGATTGGAGAGAGGAATCAGCAAAGTTAGGGCTAAAAAGGAAATGGAGCTTCAGAATCACAACAACTATCTTCGAGCACAGATTGCTGAACACGAAAGAATACAACAACAGCAACAACAGCAACAAACGAACATGATGCAAAGGGGAACGTATGAGACAGTGGGAGGAGGGCAGTACGAGGAGAACAGAAGCTATGGCGGCGTGGGGCTTATGGATTCGGACACCCATTACGCCCATCAAGACCATCTCACTGCCCTTCAGCTCGTTTAA

Protein sequence

HTLHQNLIPLFCWCSSLKVELTQISATEFPSQAGEGSASSHKKMGRAYELSVLCDAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEASKLKRQIREIQNSNRHILGEALSSLSLKDLKSLEGRLERGISKVRAKKEMELQNHNNYLRAQIAEHERIQQQQQQQQTNMMQRGTYETVGGGQYEENRSYGGVGLMDSDTHYAHQDHLTALQLV

Homology

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BLAST of Carg03446 vs. NCBI nr
Match: XP_022944555.1 (floral homeotic protein AGAMOUS-like [Cucurbita moschata])

HSP 1 Score: 319.7 bits (818), Expect = 8.2e-84
Identity = 185/203 (91.13%), Postives = 186/203 (91.63%), Query Frame = 0


Query: 46  RAYELSVLCDAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQF 105
           +AYELSVLCDAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQF
Sbjct: 31  KAYELSVLCDAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQF 90

Query: 106 YQQEASKLKRQIREIQNSNRHILGEALSSLSLKDLKSLEGRLERGISKVRAKK------- 165
           YQQEASKLKRQIREIQNSNRHILGEALSSLSLKDLKSLEGRLERGISKVRAKK       
Sbjct: 91  YQQEASKLKRQIREIQNSNRHILGEALSSLSLKDLKSLEGRLERGISKVRAKKNETLCAE 150

Query: 166 -------EMELQNHNNYLRAQIAEHERIXXXXXXXXXXXXXXGTYETVGGGQYEENRSYG 225
                  EMELQNHNNYLRAQIAEHERI  XXXXXXXXXXX GTYETVGGGQYEENRSYG
Sbjct: 151 MEFMQKREMELQNHNNYLRAQIAEHERIPQXXXXXXXXXXXRGTYETVGGGQYEENRSYG 210

Query: 226 GVGLMDSDTHYAHQDHLTALQLV 235
           GVGLMDSDTHYAHQDHLTALQLV
Sbjct: 211 GVGLMDSDTHYAHQDHLTALQLV 233

[Close]

BLAST of Carg03446 vs. NCBI nr
Match: XP_023512279.1 (agamous-like MADS-box protein AGL1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 307.0 bits (785), Expect = 5.5e-80
Identity = 169/200 (84.50%), Postives = 171/200 (85.50%), Query Frame = 0


Query: 46  RAYELSVLCDAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQF 105
           +AYELSVLCDAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQF
Sbjct: 31  KAYELSVLCDAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQF 90

Query: 106 YQQEASKLKRQIREIQNSNRHILGEALSSLSLKDLKSLEGRLERGISKVRAKK------- 165
           YQQEASKLKRQIREIQNSNRHILGEALSSLSLKDLKSLEGRLERGISKVRAKK       
Sbjct: 91  YQQEASKLKRQIREIQNSNRHILGEALSSLSLKDLKSLEGRLERGISKVRAKKNETLCAE 150

Query: 166 -------EMELQNHNNYLRAQIAEHERIXXXXXXXXXXXXXXGTYETVGGGQYEENRSYG 225
                  EMELQNHNNYL+AQIAEHERI              GTYETVGGGQYEENRSYG
Sbjct: 151 MEFMQKREMELQNHNNYLQAQIAEHERI---QQQQQTNMMQRGTYETVGGGQYEENRSYG 210

Query: 226 GVGLMDSDTHYAHQDHLTAL 232
           GVGLMDSDTHYAHQDHLT L
Sbjct: 211 GVGLMDSDTHYAHQDHLTLL 227

[Close]

BLAST of Carg03446 vs. NCBI nr
Match: KGN47033.1 (hypothetical protein Csa_6G177190 [Cucumis sativus])

HSP 1 Score: 297.4 bits (760), Expect = 4.4e-77
Identity = 193/257 (75.10%), Postives = 202/257 (78.60%), Query Frame = 0


Query: 23  QISATEFPSQAGEGSASSHKKMGR----------------------------AYELSVLC 82
           +IS TEFP+Q+GEGSASS KKMGR                            AYELSVLC
Sbjct: 61  KISTTEFPNQSGEGSASSQKKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLC 120

Query: 83  DAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEASKLK 142
           DAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEA+KLK
Sbjct: 121 DAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEATKLK 180

Query: 143 RQIREIQNSNRHILGEALSSLSLKDLKSLEGRLERGISKVRAKK--------------EM 202
           RQIREIQNSNRHILGEALSSL LK+LKSLEGRLERGISKVRAKK              EM
Sbjct: 181 RQIREIQNSNRHILGEALSSLPLKELKSLEGRLERGISKVRAKKNETLFAEMEFMQKREM 240

Query: 203 ELQNHNNYLRAQIAEHERI-XXXXXXXXXXXXXXGTYETVGGGQYEENRS-YGGVG-LMD 235
           ELQ+HNNYLR QIAEHERI XXXXXXXXXXXXXX TYE+VGG   +ENRS YG VG LMD
Sbjct: 241 ELQSHNNYLRTQIAEHERIXXXXXXXXXXXXXXXATYESVGGQYDDENRSTYGAVGALMD 300

[Close]

BLAST of Carg03446 vs. NCBI nr
Match: NP_001292697.1 (floral homeotic protein AGAMOUS [Cucumis sativus] >CAC37399.1 MADS1 protein [Cucumis sativus])

HSP 1 Score: 277.3 bits (708), Expect = 4.7e-71
Identity = 175/206 (84.95%), Postives = 182/206 (88.35%), Query Frame = 0


Query: 46  RAYELSVLCDAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQF 105
           +AYELSVLCDAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQF
Sbjct: 31  KAYELSVLCDAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQF 90

Query: 106 YQQEASKLKRQIREIQNSNRHILGEALSSLSLKDLKSLEGRLERGISKVRAKK------- 165
           YQQEA+KLKRQIREIQNSNRHILGEALSSL LK+LKSLEGRLERGISKVRAKK       
Sbjct: 91  YQQEATKLKRQIREIQNSNRHILGEALSSLPLKELKSLEGRLERGISKVRAKKNETLFAE 150

Query: 166 -------EMELQNHNNYLRAQIAEHERI-XXXXXXXXXXXXXXGTYETVGGGQYEENRS- 225
                  EMELQ+HNNYLRAQIAEHERI XXXXXXXXXXXXXX TYE+VGG   +ENRS 
Sbjct: 151 MEFMQKREMELQSHNNYLRAQIAEHERIXXXXXXXXXXXXXXXATYESVGGQYDDENRST 210

Query: 226 YGGVG-LMDSDTHYAHQDHLTALQLV 235
           YG VG LMDSD+HYA QDHLTALQLV
Sbjct: 211 YGAVGALMDSDSHYAPQDHLTALQLV 236

[Close]

BLAST of Carg03446 vs. NCBI nr
Match: XP_011657109.1 (PREDICTED: floral homeotic protein AGAMOUS [Cucumis sativus])

HSP 1 Score: 275.8 bits (704), Expect = 1.4e-70
Identity = 174/206 (84.47%), Postives = 181/206 (87.86%), Query Frame = 0


Query: 46  RAYELSVLCDAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQF 105
           +AYELSVLCDAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQF
Sbjct: 31  KAYELSVLCDAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQF 90

Query: 106 YQQEASKLKRQIREIQNSNRHILGEALSSLSLKDLKSLEGRLERGISKVRAKK------- 165
           YQQEA+KLKRQIREIQNSNRHILGEALSSL LK+LKSLEGRLERGISKVRAKK       
Sbjct: 91  YQQEATKLKRQIREIQNSNRHILGEALSSLPLKELKSLEGRLERGISKVRAKKNETLFAE 150

Query: 166 -------EMELQNHNNYLRAQIAEHERI-XXXXXXXXXXXXXXGTYETVGGGQYEENRS- 225
                  EMELQ+HNNYLR QIAEHERI XXXXXXXXXXXXXX TYE+VGG   +ENRS 
Sbjct: 151 MEFMQKREMELQSHNNYLRTQIAEHERIXXXXXXXXXXXXXXXATYESVGGQYDDENRST 210

Query: 226 YGGVG-LMDSDTHYAHQDHLTALQLV 235
           YG VG LMDSD+HYA QDHLTALQLV
Sbjct: 211 YGAVGALMDSDSHYAPQDHLTALQLV 236

[Close]

BLAST of Carg03446 vs. TAIR10
Match: AT2G42830.2 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 181.0 bits (458), Expect = 8.3e-46
Identity = 111/207 (53.62%), Postives = 140/207 (67.63%), Query Frame = 0


Query: 46  RAYELSVLCDAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQF 105
           +AYELSVLCDAEVAL++FSTRGRLYEYANNSVRGTIERYKKA +D+ N   ++ EAN Q+
Sbjct: 46  KAYELSVLCDAEVALVIFSTRGRLYEYANNSVRGTIERYKKACSDAVNPP-TITEANTQY 105

Query: 106 YQQEASKLKRQIREIQNSNRHILGEALSSLSLKDLKSLEGRLERGISKVRAK-------- 165
           YQQEASKL+RQIR+IQN NRHILGE+L SL+ K+LK+LE RLE+GIS+VR+K        
Sbjct: 106 YQQEASKLRRQIRDIQNLNRHILGESLGSLNFKELKNLESRLEKGISRVRSKKHEMLVAE 165

Query: 166 --------KEMELQNHNNYLRAQIAEHERI--XXXXXXXXXXXXXXGTYETVGGGQYEEN 225
                   KE+ELQN N YLR++I E   +                G   +   GQY  N
Sbjct: 166 IEYMQKRVKEIELQNDNMYLRSKITERTGLQQQESSVIHQGTVYESGVTSSHQSGQY--N 225

Query: 226 RSYGGVGLMDSDTHYAHQDHLTALQLV 235
           R+Y  V L++ + + ++QD    LQLV
Sbjct: 226 RNYIAVNLLEPNQNSSNQDQ-PPLQLV 248

[Close]

BLAST of Carg03446 vs. TAIR10
Match: AT3G58780.3 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 174.1 bits (440), Expect = 1.0e-43
Identity = 116/232 (50.00%), Postives = 146/232 (62.93%), Query Frame = 0


Query: 46  RAYELSVLCDAEVALIVFSTRGRLYEYANNS-------------------------VRGT 105
           +AYELSVLCDAEVAL++FSTRGRLYEYANNS                         VRGT
Sbjct: 46  KAYELSVLCDAEVALVIFSTRGRLYEYANNSXXXXXXXXXXXXXXXXXLWIYSSHVVRGT 105

Query: 106 IERYKKAFADSSNSGLSVAEANVQFYQQEASKLKRQIREIQNSNRHILGEALSSLSLKDL 165
           IERYKKA +D+ N   SV EAN Q+YQQEASKL+RQIR+IQNSNRHI+GE+L SL+ K+L
Sbjct: 106 IERYKKACSDAVNPP-SVTEANTQYYQQEASKLRRQIRDIQNSNRHIVGESLGSLNFKEL 165

Query: 166 KSLEGRLERGISKVRAKK--------------EMELQNHNNYLRAQIAEHERIXXXXXXX 225
           K+LEGRLE+GIS+VR+KK              EMELQ++N YLRA+IAE  R+       
Sbjct: 166 KNLEGRLEKGISRVRSKKNELLVAEIEYMQKREMELQHNNMYLRAKIAEGARLNPDQQES 225

Query: 226 XXXXXXXGTYETVGGGQYEE----NRSYGGVGLMDSDTHYAHQDHLTALQLV 235
                    YE+ G   +++    NR+Y  V L++ +  ++ QD    LQLV
Sbjct: 226 SVIQGTT-VYES-GVSSHDQSQHYNRNYIPVNLLEPNQQFSGQDQ-PPLQLV 273

[Close]

BLAST of Carg03446 vs. TAIR10
Match: AT4G18960.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 169.1 bits (427), Expect = 3.3e-42
Identity = 106/219 (48.40%), Postives = 140/219 (63.93%), Query Frame = 0


Query: 46  RAYELSVLCDAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQF 105
           +AYELSVLCDAEVALIVFS+RGRLYEY+NNSV+GTIERYKKA +D+SN+G SVAE N Q+
Sbjct: 47  KAYELSVLCDAEVALIVFSSRGRLYEYSNNSVKGTIERYKKAISDNSNTG-SVAEINAQY 106

Query: 106 YQQEASKLKRQIREIQNSNRHILGEALSSLSLKDLKSLEGRLERGISKVRAKK------- 165
           YQQE++KL++QI  IQNSNR ++GE + S+S K+L++LEGRLER I+++R+KK       
Sbjct: 107 YQQESAKLRQQIISIQNSNRQLMGETIGSMSPKELRNLEGRLERSITRIRSKKNELLFSE 166

Query: 166 -------EMELQNHNNYLRAQIAEHERIXXXXXXXXXXXXXXGTYETVGGGQYE------ 225
                  E++L N N  LRA+IAE+ER                     GG  YE      
Sbjct: 167 IDYMQKREVDLHNDNQILRAKIAENERNNPSISLMP------------GGSNYEQLMPPP 226

Query: 226 -------ENRSYGGVGLMDSDTHY---AHQDHLTALQLV 235
                  ++R+Y  V  +  + H+   A +   TALQLV
Sbjct: 227 QTQSQPFDSRNYFQVAALQPNNHHYSSAGRQDQTALQLV 252

[Close]

BLAST of Carg03446 vs. TAIR10
Match: AT4G09960.3 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 163.7 bits (413), Expect = 1.4e-40
Identity = 88/147 (59.86%), Postives = 116/147 (78.91%), Query Frame = 0


Query: 46  RAYELSVLCDAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQF 105
           +AYELSVLCDAEVALIVFSTRGRLYEYANN++R TIERYKKA +DS+N+  +V E N  +
Sbjct: 57  KAYELSVLCDAEVALIVFSTRGRLYEYANNNIRSTIERYKKACSDSTNTS-TVQEINAAY 116

Query: 106 YQQEASKLKRQIREIQNSNRHILGEALSSLSLKDLKSLEGRLERGISKVRAKK------- 165
           YQQE++KL++QI+ IQNSNR+++G++LSSLS+K+LK +E RLE+ IS++R+KK       
Sbjct: 117 YQQESAKLRQQIQTIQNSNRNLMGDSLSSLSVKELKQVENRLEKAISRIRSKKHELLLVE 176

Query: 166 -------EMELQNHNNYLRAQIAEHER 179
                  E+EL N N YLR ++AE ER
Sbjct: 177 IENAQKREIELDNENIYLRTKVAEVER 202

[Close]

BLAST of Carg03446 vs. TAIR10
Match: AT3G57230.1 (AGAMOUS-like 16)

HSP 1 Score: 98.6 bits (244), Expect = 5.4e-21
Identity = 51/117 (43.59%), Postives = 85/117 (72.65%), Query Frame = 0


Query: 46  RAYELSVLCDAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQF 105
           +A EL++LCDAEV +I+FS+ GRLY+++++S++  IERY  A  ++S+     +E  +QF
Sbjct: 31  KAKELAILCDAEVGVIIFSSTGRLYDFSSSSMKSVIERYSDAKGETSSENDPASE--IQF 90

Query: 106 YQQEASKLKRQIREIQNSNRHILGEALSSLSLKDLKSLEGRLERGISKVRAKKEMEL 163
           +Q+EA+ LKRQ+  +Q ++R ++GE LS LS++ L++LE +LE  +  VR KK+  L
Sbjct: 91  WQKEAAILKRQLHNLQENHRQMMGEELSGLSVEALQNLENQLELSLRGVRMKKDQML 145

[Close]

BLAST of Carg03446 vs. Swiss-Prot
Match: sp|P29381|AGL1_ARATH (Agamous-like MADS-box protein AGL1 OS=Arabidopsis thaliana OX=3702 GN=AGL1 PE=1 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.2e-46
Identity = 116/207 (56.04%), Postives = 146/207 (70.53%), Query Frame = 0


Query: 46  RAYELSVLCDAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQF 105
           +AYELSVLCDAEVAL++FSTRGRLYEYANNSVRGTIERYKKA +D+ N   SV EAN Q+
Sbjct: 46  KAYELSVLCDAEVALVIFSTRGRLYEYANNSVRGTIERYKKACSDAVNPP-SVTEANTQY 105

Query: 106 YQQEASKLKRQIREIQNSNRHILGEALSSLSLKDLKSLEGRLERGISKVRAKK------- 165
           YQQEASKL+RQIR+IQNSNRHI+GE+L SL+ K+LK+LEGRLE+GIS+VR+KK       
Sbjct: 106 YQQEASKLRRQIRDIQNSNRHIVGESLGSLNFKELKNLEGRLEKGISRVRSKKNELLVAE 165

Query: 166 -------EMELQNHNNYLRAQIAEHERIXXXXXXXXXXXXXXGTYETVGGGQYEE----N 225
                  EMELQ++N YLRA+IAE  R+                YE+ G   +++    N
Sbjct: 166 IEYMQKREMELQHNNMYLRAKIAEGARLNPDQQESSVIQGTT-VYES-GVSSHDQSQHYN 225

Query: 226 RSYGGVGLMDSDTHYAHQDHLTALQLV 235
           R+Y  V L++ +  ++ QD    LQLV
Sbjct: 226 RNYIPVNLLEPNQQFSGQDQ-PPLQLV 248

[Close]

BLAST of Carg03446 vs. Swiss-Prot
Match: sp|P29385|AGL5_ARATH (Agamous-like MADS-box protein AGL5 OS=Arabidopsis thaliana OX=3702 GN=AGL5 PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 8.8e-45
Identity = 111/205 (54.15%), Postives = 140/205 (68.29%), Query Frame = 0


Query: 46  RAYELSVLCDAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQF 105
           +AYELSVLCDAEVAL++FSTRGRLYEYANNSVRGTIERYKKA +D+ N   ++ EAN Q+
Sbjct: 46  KAYELSVLCDAEVALVIFSTRGRLYEYANNSVRGTIERYKKACSDAVNPP-TITEANTQY 105

Query: 106 YQQEASKLKRQIREIQNSNRHILGEALSSLSLKDLKSLEGRLERGISKVRAKK------- 165
           YQQEASKL+RQIR+IQN NRHILGE+L SL+ K+LK+LE RLE+GIS+VR+KK       
Sbjct: 106 YQQEASKLRRQIRDIQNLNRHILGESLGSLNFKELKNLESRLEKGISRVRSKKHEMLVAE 165

Query: 166 -------EMELQNHNNYLRAQIAEHERI--XXXXXXXXXXXXXXGTYETVGGGQYEENRS 225
                  E+ELQN N YLR++I E   +                G   +   GQY  NR+
Sbjct: 166 IEYMQKREIELQNDNMYLRSKITERTGLQQQESSVIHQGTVYESGVTSSHQSGQY--NRN 225

Query: 226 YGGVGLMDSDTHYAHQDHLTALQLV 235
           Y  V L++ + + ++QD    LQLV
Sbjct: 226 YIAVNLLEPNQNSSNQDQ-PPLQLV 246

[Close]

BLAST of Carg03446 vs. Swiss-Prot
Match: sp|Q40885|AG_PETHY (Floral homeotic protein AGAMOUS OS=Petunia hybrida OX=4102 GN=AG1 PE=1 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.1e-44
Identity = 109/203 (53.69%), Postives = 141/203 (69.46%), Query Frame = 0


Query: 46  RAYELSVLCDAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQF 105
           +AYELSVLCDAEVALIVFS+RGRLYEYANNSV+ TIERYKKA +DSSN+G S+AEAN Q+
Sbjct: 47  KAYELSVLCDAEVALIVFSSRGRLYEYANNSVKATIERYKKACSDSSNTG-SIAEANAQY 106

Query: 106 YQQEASKLKRQIREIQNSNRHILGEALSSLSLKDLKSLEGRLERGISKVRAKK------- 165
           YQQEASKL+ QI  +QN NR+ LGE+L++L+L+DL++LE ++E+GISK+RAKK       
Sbjct: 107 YQQEASKLRAQIGNLQNQNRNFLGESLAALNLRDLRNLEQKIEKGISKIRAKKNELLFAE 166

Query: 166 -------EMELQNHNNYLRAQIAEHERIXXXXXXXXXXXXXXGTYETVGGGQYEENRSYG 225
                  E++L N+N YLRA+IAE ER                +Y+ V   Q  + R+Y 
Sbjct: 167 IEYMQKREIDLHNNNQYLRAKIAETER-----SQQMNLMPGSSSYDLVPPQQSFDARNYL 226

Query: 226 GVGLMDSDTHYAHQDHLTALQLV 235
            V  + ++ HY  QD    LQLV
Sbjct: 227 QVNGLQTNNHYPRQDQ-PPLQLV 242

[Close]

BLAST of Carg03446 vs. Swiss-Prot
Match: sp|Q43585|AG_TOBAC (Floral homeotic protein AGAMOUS OS=Nicotiana tabacum OX=4097 GN=AG1 PE=2 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 3.3e-44
Identity = 122/204 (59.80%), Postives = 154/204 (75.49%), Query Frame = 0


Query: 46  RAYELSVLCDAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQF 105
           +AYELSVLCDAEVALIVFS+RGRLYEYANNSV+ TIERYKKA +DSSN+G S++EAN Q+
Sbjct: 47  KAYELSVLCDAEVALIVFSSRGRLYEYANNSVKATIERYKKACSDSSNTG-SISEANAQY 106

Query: 106 YQQEASKLKRQIREIQNSNRHILGEALSSLSLKDLKSLEGRLERGISKVRAKK------- 165
           YQQEASKL+ QI  +QN NR++LGE+L++LSL+DLK+LE ++E+GISK+R+KK       
Sbjct: 107 YQQEASKLRAQIGNLQNQNRNMLGESLAALSLRDLKNLEQKIEKGISKIRSKKNELLFAE 166

Query: 166 -------EMELQNHNNYLRAQIAEHE-RIXXXXXXXXXXXXXXGTYETVGGGQYEENRSY 225
                  E++L N+N YLRA+IAE E   XXXXXXXXXXXXXX  YE V      + R+Y
Sbjct: 167 IEYMQKREIDLHNNNQYLRAKIAETEXXXXXXXXXXXXXXXXXXXYELVPPPHQFDTRNY 226

Query: 226 GGVGLMDSDTHYAHQDHLTALQLV 235
             V  + ++ HY  QD   +LQLV
Sbjct: 227 LQVNGLQTNNHYTRQDQ-PSLQLV 248

[Close]

BLAST of Carg03446 vs. Swiss-Prot
Match: sp|Q40872|AG_PANGI (Floral homeotic protein AGAMOUS OS=Panax ginseng OX=4054 GN=AG2 PE=2 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 5.7e-44
Identity = 109/203 (53.69%), Postives = 141/203 (69.46%), Query Frame = 0


Query: 46  RAYELSVLCDAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQF 105
           +AYELSVLCDAEVALIVFSTRGRLYEYANNSV+GTIERYKKA  DS N+  SV+EAN QF
Sbjct: 47  KAYELSVLCDAEVALIVFSTRGRLYEYANNSVKGTIERYKKACTDSPNTS-SVSEANAQF 106

Query: 106 YQQEASKLKRQIREIQNSNRHILGEALSSLSLKDLKSLEGRLERGISKVRA--------- 165
           YQQEASKL+++I  IQ +NR+++GE+L SL+++DLK LE +LE+GIS++R+         
Sbjct: 107 YQQEASKLRQEISSIQKNNRNMMGESLGSLTVRDLKGLETKLEKGISRIRSKKNELLFAE 166

Query: 166 -----KKEMELQNHNNYLRAQIAEHERIXXXXXXXXXXXXXXGTYETVGGGQYEENRSYG 225
                KKE++L N+N YLRA+IAE+ER                 YE +   Q  + R+Y 
Sbjct: 167 IEYMQKKEIDLHNNNQYLRAKIAENER----AQQHMNLMPGSSDYE-LAPPQSFDGRNYI 226

Query: 226 GVGLMDSDTHYAHQDHLTALQLV 235
            +  +  + HY+ QD  TALQLV
Sbjct: 227 QLNGLQPNNHYSRQDQ-TALQLV 242

[Close]

BLAST of Carg03446 vs. TrEMBL
Match: tr|A0A0A0KC22|A0A0A0KC22_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G177190 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 2.9e-77
Identity = 193/257 (75.10%), Postives = 202/257 (78.60%), Query Frame = 0


Query: 23  QISATEFPSQAGEGSASSHKKMGR----------------------------AYELSVLC 82
           +IS TEFP+Q+GEGSASS KKMGR                            AYELSVLC
Sbjct: 61  KISTTEFPNQSGEGSASSQKKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLC 120

Query: 83  DAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEASKLK 142
           DAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEA+KLK
Sbjct: 121 DAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEATKLK 180

Query: 143 RQIREIQNSNRHILGEALSSLSLKDLKSLEGRLERGISKVRAKK--------------EM 202
           RQIREIQNSNRHILGEALSSL LK+LKSLEGRLERGISKVRAKK              EM
Sbjct: 181 RQIREIQNSNRHILGEALSSLPLKELKSLEGRLERGISKVRAKKNETLFAEMEFMQKREM 240

Query: 203 ELQNHNNYLRAQIAEHERI-XXXXXXXXXXXXXXGTYETVGGGQYEENRS-YGGVG-LMD 235
           ELQ+HNNYLR QIAEHERI XXXXXXXXXXXXXX TYE+VGG   +ENRS YG VG LMD
Sbjct: 241 ELQSHNNYLRTQIAEHERIXXXXXXXXXXXXXXXATYESVGGQYDDENRSTYGAVGALMD 300

[Close]

BLAST of Carg03446 vs. TrEMBL
Match: tr|Q9ARE9|Q9ARE9_CUCSA (MADS1 protein OS=Cucumis sativus OX=3659 GN=m1 PE=2 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 3.1e-71
Identity = 175/206 (84.95%), Postives = 182/206 (88.35%), Query Frame = 0


Query: 46  RAYELSVLCDAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQF 105
           +AYELSVLCDAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQF
Sbjct: 31  KAYELSVLCDAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQF 90

Query: 106 YQQEASKLKRQIREIQNSNRHILGEALSSLSLKDLKSLEGRLERGISKVRAKK------- 165
           YQQEA+KLKRQIREIQNSNRHILGEALSSL LK+LKSLEGRLERGISKVRAKK       
Sbjct: 91  YQQEATKLKRQIREIQNSNRHILGEALSSLPLKELKSLEGRLERGISKVRAKKNETLFAE 150

Query: 166 -------EMELQNHNNYLRAQIAEHERI-XXXXXXXXXXXXXXGTYETVGGGQYEENRS- 225
                  EMELQ+HNNYLRAQIAEHERI XXXXXXXXXXXXXX TYE+VGG   +ENRS 
Sbjct: 151 MEFMQKREMELQSHNNYLRAQIAEHERIXXXXXXXXXXXXXXXATYESVGGQYDDENRST 210

Query: 226 YGGVG-LMDSDTHYAHQDHLTALQLV 235
           YG VG LMDSD+HYA QDHLTALQLV
Sbjct: 211 YGAVGALMDSDSHYAPQDHLTALQLV 236

[Close]

BLAST of Carg03446 vs. TrEMBL
Match: tr|A0A1S3C3D0|A0A1S3C3D0_CUCME (floral homeotic protein AGAMOUS OS=Cucumis melo OX=3656 GN=LOC103496392 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 8.5e-53
Identity = 143/175 (81.71%), Postives = 151/175 (86.29%), Query Frame = 0


Query: 76  SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEASKLKRQIREIQNSNRHILGEALSSL 135
           SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEA+KLKRQIREIQNSNRHILGEALSSL
Sbjct: 10  SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEATKLKRQIREIQNSNRHILGEALSSL 69

Query: 136 SLKDLKSLEGRLERGISKVRAKK--------------EMELQNHNNYLRAQIAEHERI-X 195
            LK+LKSLEGRLERGISKVRAKK              E+ELQ+HNNYLRAQIAEHERI X
Sbjct: 70  PLKELKSLEGRLERGISKVRAKKNETLFAEMEFMQKREVELQSHNNYLRAQIAEHERIXX 129

Query: 196 XXXXXXXXXXXXXGTYETVGGGQYEENRS-YGGVG-LMDSDTHYAHQDHLTALQL 234
           XXXXXXXXXXXXX TYE+VGG   +ENRS YG VG LMDSD+HYA QDHLTALQ+
Sbjct: 130 XXXXXXXXXXXXXATYESVGGQYDDENRSTYGAVGALMDSDSHYAPQDHLTALQV 184

[Close]

BLAST of Carg03446 vs. TrEMBL
Match: tr|A0A2P5EYN7|A0A2P5EYN7_9ROSA (MADS-box transcription factor OS=Trema orientalis OX=63057 GN=TorMADS46 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 4.2e-52
Identity = 134/212 (63.21%), Postives = 156/212 (73.58%), Query Frame = 0


Query: 46  RAYELSVLCDAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQF 105
           +AYELSVLCDAEVALIVFS+RGRLYEYANNSVR TIE+YKKA  DSSN+G SVAEANVQF
Sbjct: 31  KAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIEKYKKACTDSSNTG-SVAEANVQF 90

Query: 106 YQQEASKLKRQIREIQNSNRHILGEALSSLSLKDLKSLEGRLERGISKVRAKK------- 165
           YQQE+SKL+RQIRE+QNSNRHILGEA+SS+S KDLKSLEGRLERGIS++R+KK       
Sbjct: 91  YQQESSKLRRQIRELQNSNRHILGEAISSMSFKDLKSLEGRLERGISRIRSKKNEMLFAE 150

Query: 166 -------EMELQNHNNYLRAQIAEHERI-----------XXXXXXXXXXXXXXGTYETVG 225
                  EMELQNHNNYLRA+IAE+ERI           XXXXXXXX       +   + 
Sbjct: 151 IEFMQKREMELQNHNNYLRAKIAENERIQXXXXXXXXXXXXXXXXXXPVAARAASESNMP 210

Query: 226 GGQYEENRSYGGVGLMDSDTHYAHQDHLTALQ 233
             Q  ++RS+  V LMD+  HY+  D    +Q
Sbjct: 211 PAQSYDHRSFLPVTLMDTSHHYSRPDQTVEVQ 241

[Close]

BLAST of Carg03446 vs. TrEMBL
Match: tr|A0A151RYP3|A0A151RYP3_CAJCA (Agamous-like MADS-box protein AGL1 OS=Cajanus cajan OX=3821 GN=KK1_030697 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 8.0e-51
Identity = 139/250 (55.60%), Postives = 163/250 (65.20%), Query Frame = 0


Query: 28  EFPSQAGEGSASSHKKMGR----------------------------AYELSVLCDAEVA 87
           + P+QA EG  SS KKMGR                            AYELSVLCDAEVA
Sbjct: 2   DLPNQAQEG--SSQKKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVA 61

Query: 88  LIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEASKLKRQIRE 147
           L+VFSTRGRLYEYANNSVR TIERYKKA A SSN+  SV+EAN QFYQQE+SKL+RQIR+
Sbjct: 62  LVVFSTRGRLYEYANNSVRATIERYKKACAASSNAE-SVSEANTQFYQQESSKLRRQIRD 121

Query: 148 IQNSNRHILGEALSSLSLKDLKSLEGRLERGISKVRA--------------KKEMELQNH 207
           IQN NRHILGEAL SLSLK+LK+LEGRLE+G+S+VR+              K+E+ELQNH
Sbjct: 122 IQNLNRHILGEALGSLSLKELKNLEGRLEKGLSRVRSRKHETLFADVEFMQKREIELQNH 181

Query: 208 NNYLRAQIAEHERIXXXXXXXXXXXXXXGTY-ETVGGGQYEENRSYGGVGLMDSDTHYAH 235
           NNYLRA+IAEHER               GT  E++    Y+  R++  V L+ SD  Y+ 
Sbjct: 182 NNYLRAKIAEHER-----AQQQQSNMMQGTLCESLPSQSYD--RNFFPVNLIASDQQYSR 240

The following BLAST results are available for this feature:

BLAST of Carg03446 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022944555.1	8.2e-84	91.13	floral homeotic protein AGAMOUS-like [Cucurbita moschata]	[more]
XP_023512279.1	5.5e-80	84.50	agamous-like MADS-box protein AGL1 [Cucurbita pepo subsp. pepo]	[more]
KGN47033.1	4.4e-77	75.10	hypothetical protein Csa_6G177190 [Cucumis sativus]	[more]
NP_001292697.1	4.7e-71	84.95	floral homeotic protein AGAMOUS [Cucumis sativus] >CAC37399.1 MADS1 protein [Cuc...	[more]
XP_011657109.1	1.4e-70	84.47	PREDICTED: floral homeotic protein AGAMOUS [Cucumis sativus]	[more]

BLAST of Carg03446 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G42830.2	8.3e-46	53.62	K-box region and MADS-box transcription factor family protein	[more]
AT3G58780.3	1.0e-43	50.00	K-box region and MADS-box transcription factor family protein	[more]
AT4G18960.1	3.3e-42	48.40	K-box region and MADS-box transcription factor family protein	[more]
AT4G09960.3	1.4e-40	59.86	K-box region and MADS-box transcription factor family protein	[more]
AT3G57230.1	5.4e-21	43.59	AGAMOUS-like 16	[more]

BLAST of Carg03446 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P29381\|AGL1_ARATH	1.2e-46	56.04	Agamous-like MADS-box protein AGL1 OS=Arabidopsis thaliana OX=3702 GN=AGL1 PE=1 ...	[more]
sp\|P29385\|AGL5_ARATH	8.8e-45	54.15	Agamous-like MADS-box protein AGL5 OS=Arabidopsis thaliana OX=3702 GN=AGL5 PE=1 ...	[more]
sp\|Q40885\|AG_PETHY	1.1e-44	53.69	Floral homeotic protein AGAMOUS OS=Petunia hybrida OX=4102 GN=AG1 PE=1 SV=1	[more]
sp\|Q43585\|AG_TOBAC	3.3e-44	59.80	Floral homeotic protein AGAMOUS OS=Nicotiana tabacum OX=4097 GN=AG1 PE=2 SV=1	[more]
sp\|Q40872\|AG_PANGI	5.7e-44	53.69	Floral homeotic protein AGAMOUS OS=Panax ginseng OX=4054 GN=AG2 PE=2 SV=1	[more]

BLAST of Carg03446 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KC22\|A0A0A0KC22_CUCSA	2.9e-77	75.10	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G177190 PE=4 SV=1	[more]
tr\|Q9ARE9\|Q9ARE9_CUCSA	3.1e-71	84.95	MADS1 protein OS=Cucumis sativus OX=3659 GN=m1 PE=2 SV=1	[more]
tr\|A0A1S3C3D0\|A0A1S3C3D0_CUCME	8.5e-53	81.71	floral homeotic protein AGAMOUS OS=Cucumis melo OX=3656 GN=LOC103496392 PE=4 SV=...	[more]
tr\|A0A2P5EYN7\|A0A2P5EYN7_9ROSA	4.2e-52	63.21	MADS-box transcription factor OS=Trema orientalis OX=63057 GN=TorMADS46 PE=4 SV=...	[more]
tr\|A0A151RYP3\|A0A151RYP3_CAJCA	8.0e-51	55.60	Agamous-like MADS-box protein AGL1 OS=Cajanus cajan OX=3821 GN=KK1_030697 PE=4 S...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0046983	protein dimerization activity
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **INTERPRO**
Term	Definition
IPR002487	TF_Kbox
IPR036879	TF_MADSbox_sf
IPR002100	TF_MADSbox

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg03446-RA	Carg03446-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 96..123
None	No IPR available	PANTHER	PTHR11945:SF150	AGAMOUS-LIKE MADS-BOX PROTEIN AGL1-RELATED	coord: 45..228
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 45..228
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 53..74 score: 64.02 coord: 38..53 score: 39.29
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 44..75 e-value: 9.7E-4 score: 22.5
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 47..72 e-value: 5.0E-10 score: 38.6
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 44..76 score: 14.759
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	G3DSA:3.40.1810.10		coord: 42..108 e-value: 2.8E-15 score: 58.2
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	SSF55455	SRF-like	coord: 46..88
IPR002487	Transcription factor, K-box	PFAM	PF01486	K-box	coord: 102..192 e-value: 2.3E-18 score: 66.0
IPR002487	Transcription factor, K-box	PROSITE	PS51297	K_BOX	coord: 103..189 score: 12.935

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg03446	MELO3C019694	Melon (DHL92) v3.5.1	carmeB0339
Carg03446	ClCG02G018350	Watermelon (Charleston Gray)	carwcgB0327
Carg03446	CSPI06G13370	Wild cucumber (PI 183967)	carcpiB0376
Carg03446	Cucsa.139620	Cucumber (Gy14) v1	carcgyB0394
Carg03446	CmaCh20G002540	Cucurbita maxima (Rimu)	carcmaB0473
Carg03446	CmoCh20G002790	Cucurbita moschata (Rifu)	carcmoB0464
Carg03446	Lsi10G015440	Bottle gourd (USVL1VR-Ls)	carlsiB303
Carg03446	Cp4.1LG16g07400	Cucurbita pepo (Zucchini)	carcpeB0465
Carg03446	CsGy6G013350	Cucumber (Gy14) v2	carcgybB0353
Carg03446	MELO3C019694.2	Melon (DHL92) v3.6.1	carmedB0347
Carg03446	CsaV3_6G015770	Cucumber (Chinese Long) v3	carcucB0377
Carg03446	Cla97C02G044160	Watermelon (97103) v2	carwmbB0346
Carg03446	Bhi10G000772	Wax gourd	carwgoB0419

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg03446	Watermelon (97103) v2	carwmbB0355
Carg03446	Wax gourd	carwgoB0417
Carg03446	Silver-seed gourd	carcarB030
Carg03446	Silver-seed gourd	carcarB352
Carg03446	Silver-seed gourd	carcarB358
Carg03446	Cucurbita maxima (Rimu)	carcmaB0466
Carg03446	Cucurbita maxima (Rimu)	carcmaB0471
Carg03446	Cucurbita maxima (Rimu)	carcmaB0475
Carg03446	Cucurbita moschata (Rifu)	carcmoB0457
Carg03446	Cucurbita moschata (Rifu)	carcmoB0463
Carg03446	Cucurbita moschata (Rifu)	carcmoB0466
Carg03446	Cucurbita pepo (Zucchini)	carcpeB0464
Carg03446	Cucurbita pepo (Zucchini)	carcpeB0474
Carg03446	Cucurbita pepo (Zucchini)	carcpeB0479
Carg03446	Cucumber (Chinese Long) v2	carcuB0373
Carg03446	Bottle gourd (USVL1VR-Ls)	carlsiB306
Carg03446	Watermelon (Charleston Gray)	carwcgB0322
Carg03446	Watermelon (97103) v1	carwmB0320
Carg03446	Watermelon (97103) v1	carwmB0330