Carg03304 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CAATCCACGTTGGTGTCCACGTGTGCCCATCGTCCCCTGAAACAAATTAGCTTCGCGTTCATAATCATCTTCATCATCTTCACCATGCTCCACAGTTCAGTGCTCTCTCAATCCATTAACAATGTCGTCCAATCTCAAGCCAACCTTCGCATACACGATTATCTACGTCAAGGACGTCGCGAAATCAGTCGATTTCTACTCCAAAGCCTTCGGTTTCACCGTCCGCCGCCTCGATCATTCCAACAGGTAATCAAAACCCTAAATCATCACTGCAACAATCGATAAAATCCATAACAAATCACGAAAGATCGCTTCGTTTTCGATACAGGTGGGGAGAGCTTGAGAGCGGAGGAACTACCATCGCATTCACACCTCTGCACCAACACGAAACAGAGGATCTCACCGGCGAAGTCCAAATCCCATCCTCCAATCGCGAACGAAACCCTATCGAGATCTGTATCGATTATCCCGATGTGGATGCGGCCTATCAGGTAAAATTGGAGCCACATTTTGATTCCTGTATCTCAATTGATTGATTCGATGCCGGAATTTACCGATCTGAGAGAAAGTTGTTCGGATTTTTCGTGGTTATCAGAGGGCGGTGGAGAATGGTGCGGCGGCGGTGAGCCAGCCGGAGGCGAAAGAGTGGAAGCAGAGAGTAGGATATGTACGGGACATTGATGGAATGGTGGTGCGGATAGGTAGCCATGTGAATCAACCAAAACAGAACTGA CAATCCACGTTGGTGTCCACGTGTGCCCATCGTCCCCTGAAACAAATTAGCTTCGCGTTCATAATCATCTTCATCATCTTCACCATGCTCCACAGTTCAGTGCTCTCTCAATCCATTAACAATGTCGTCCAATCTCAAGCCAACCTTCGCATACACGATTATCTACGTCAAGGACGTCGCGAAATCAGTCGATTTCTACTCCAAAGCCTTCGGTTTCACCGTCCGCCGCCTCGATCATTCCAACAGGTGGGGAGAGCTTGAGAGCGGAGGAACTACCATCGCATTCACACCTCTGCACCAACACGAAACAGAGGATCTCACCGGCGAAGTCCAAATCCCATCCTCCAATCGCGAACGAAACCCTATCGAGATCTGTATCGATTATCCCGATGTGGATGCGGCCTATCAGAGGGCGGTGGAGAATGGTGCGGCGGCGGTGAGCCAGCCGGAGGCGAAAGAGTGGAAGCAGAGAGTAGGATATGTACGGGACATTGATGGAATGGTGGTGCGGATAGGTAGCCATGTGAATCAACCAAAACAGAACTGA ATGTCGTCCAATCTCAAGCCAACCTTCGCATACACGATTATCTACGTCAAGGACGTCGCGAAATCAGTCGATTTCTACTCCAAAGCCTTCGGTTTCACCGTCCGCCGCCTCGATCATTCCAACAGGTGGGGAGAGCTTGAGAGCGGAGGAACTACCATCGCATTCACACCTCTGCACCAACACGAAACAGAGGATCTCACCGGCGAAGTCCAAATCCCATCCTCCAATCGCGAACGAAACCCTATCGAGATCTGTATCGATTATCCCGATGTGGATGCGGCCTATCAGAGGGCGGTGGAGAATGGTGCGGCGGCGGTGAGCCAGCCGGAGGCGAAAGAGTGGAAGCAGAGAGTAGGATATGTACGGGACATTGATGGAATGGTGGTGCGGATAGGTAGCCATGTGAATCAACCAAAACAGAACTGA MSSNLKPTFAYTIIYVKDVAKSVDFYSKAFGFTVRRLDHSNRWGELESGGTTIAFTPLHQHETEDLTGEVQIPSSNRERNPIEICIDYPDVDAAYQRAVENGAAAVSQPEAKEWKQRVGYVRDIDGMVVRIGSHVNQPKQN
BLAST of Carg03304 vs. NCBI nr
Match: XP_022944322.1 (uncharacterized protein LOC111448801 [Cucurbita moschata] >XP_023512025.1 uncharacterized protein LOC111776860 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 290.0 bits (741), Expect = 4.2e-75 Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0
BLAST of Carg03304 vs. NCBI nr
Match: XP_022986964.1 (uncharacterized protein LOC111484544 [Cucurbita maxima]) HSP 1 Score: 281.6 bits (719), Expect = 1.5e-72 Identity = 137/141 (97.16%), Postives = 137/141 (97.16%), Query Frame = 0
BLAST of Carg03304 vs. NCBI nr
Match: XP_008448396.1 (PREDICTED: uncharacterized protein LOC103490595 [Cucumis melo]) HSP 1 Score: 254.2 bits (648), Expect = 2.6e-64 Identity = 122/141 (86.52%), Postives = 129/141 (91.49%), Query Frame = 0
BLAST of Carg03304 vs. NCBI nr
Match: XP_004143102.1 (PREDICTED: uncharacterized protein LOC101220207 [Cucumis sativus] >KGN47167.1 hypothetical protein Csa_6G191550 [Cucumis sativus]) HSP 1 Score: 248.8 bits (634), Expect = 1.1e-62 Identity = 120/141 (85.11%), Postives = 128/141 (90.78%), Query Frame = 0
BLAST of Carg03304 vs. NCBI nr
Match: XP_022148412.1 (uncharacterized protein LOC111017067 [Momordica charantia]) HSP 1 Score: 241.5 bits (615), Expect = 1.7e-60 Identity = 115/139 (82.73%), Postives = 126/139 (90.65%), Query Frame = 0
BLAST of Carg03304 vs. TAIR10
Match: AT1G07645.1 (dessication-induced 1VOC superfamily protein) HSP 1 Score: 214.9 bits (546), Expect = 3.1e-56 Identity = 103/136 (75.74%), Postives = 120/136 (88.24%), Query Frame = 0
BLAST of Carg03304 vs. Swiss-Prot
Match: sp|P9WKQ2|Y887_MYCTO (Uncharacterized protein MT0910 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=MT0910 PE=4 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 1.1e-05 Identity = 40/139 (28.78%), Postives = 66/139 (47.48%), Query Frame = 0
BLAST of Carg03304 vs. Swiss-Prot
Match: sp|P9WKQ3|Y887_MYCTU (Uncharacterized protein Rv0887c OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=Rv0887c PE=1 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 1.1e-05 Identity = 40/139 (28.78%), Postives = 66/139 (47.48%), Query Frame = 0
BLAST of Carg03304 vs. Swiss-Prot
Match: sp|P64742|Y911_MYCBO (Uncharacterized protein Mb0911c OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) OX=233413 GN=BQ2027_MB0911C PE=4 SV=2) HSP 1 Score: 51.2 bits (121), Expect = 1.1e-05 Identity = 40/139 (28.78%), Postives = 66/139 (47.48%), Query Frame = 0
BLAST of Carg03304 vs. TrEMBL
Match: tr|A0A1S3BK80|A0A1S3BK80_CUCME (uncharacterized protein LOC103490595 OS=Cucumis melo OX=3656 GN=LOC103490595 PE=4 SV=1) HSP 1 Score: 254.2 bits (648), Expect = 1.7e-64 Identity = 122/141 (86.52%), Postives = 129/141 (91.49%), Query Frame = 0
BLAST of Carg03304 vs. TrEMBL
Match: tr|A0A0A0KFG8|A0A0A0KFG8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G191550 PE=4 SV=1) HSP 1 Score: 248.8 bits (634), Expect = 7.1e-63 Identity = 120/141 (85.11%), Postives = 128/141 (90.78%), Query Frame = 0
BLAST of Carg03304 vs. TrEMBL
Match: tr|A0A2P4LRT5|A0A2P4LRT5_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_45255 PE=4 SV=1) HSP 1 Score: 229.2 bits (583), Expect = 5.8e-57 Identity = 108/141 (76.60%), Postives = 122/141 (86.52%), Query Frame = 0
BLAST of Carg03304 vs. TrEMBL
Match: tr|A0A2I4EV07|A0A2I4EV07_9ROSI (uncharacterized protein LOC108992954 OS=Juglans regia OX=51240 GN=LOC108992954 PE=4 SV=1) HSP 1 Score: 221.9 bits (564), Expect = 9.3e-55 Identity = 103/141 (73.05%), Postives = 122/141 (86.52%), Query Frame = 0
BLAST of Carg03304 vs. TrEMBL
Match: tr|A0A1Q3AQR9|A0A1Q3AQR9_CEPFO (Glyoxalase_2 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_01439 PE=4 SV=1) HSP 1 Score: 221.1 bits (562), Expect = 1.6e-54 Identity = 104/141 (73.76%), Postives = 121/141 (85.82%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |