Carg03300 (gene) Silver-seed gourd

Overview
NameCarg03300
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionhistone H4
LocationCucurbita_argyrosperma_scaffold_005 : 1152492 .. 1152803 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTGGACGTGGTAAGGGAGGTAAGGGGTTGGGAAAGGGAGGAGCAAAGCGTCACAGGAAGGTTTTAAGAGACAACATTCAGGGAATTACAAAGCCCGCAATCCGTCGTTTGGCTCGTAGAGGTGGCGTGAAGCGTATCAGTGGATTGATCTATGAAGAAACCCGAGGAGTTTTGAAGATTTTCCTTGAGAATGTGATTCGTGATGCTGTTACCTACACTGAGCATGCAAGGAGGAAGACGGTGACTGCTATGGATGTGGTCTATGCCTTGAAAAGGCAGGGAAGGACTTTGTACGGTTTCGGAGGTTAG

mRNA sequence

ATGTCTGGACGTGGTAAGGGAGGTAAGGGGTTGGGAAAGGGAGGAGCAAAGCGTCACAGGAAGGTTTTAAGAGACAACATTCAGGGAATTACAAAGCCCGCAATCCGTCGTTTGGCTCGTAGAGGTGGCGTGAAGCGTATCAGTGGATTGATCTATGAAGAAACCCGAGGAGTTTTGAAGATTTTCCTTGAGAATGTGATTCGTGATGCTGTTACCTACACTGAGCATGCAAGGAGGAAGACGGTGACTGCTATGGATGTGGTCTATGCCTTGAAAAGGCAGGGAAGGACTTTGTACGGTTTCGGAGGTTAG

Coding sequence (CDS)

ATGTCTGGACGTGGTAAGGGAGGTAAGGGGTTGGGAAAGGGAGGAGCAAAGCGTCACAGGAAGGTTTTAAGAGACAACATTCAGGGAATTACAAAGCCCGCAATCCGTCGTTTGGCTCGTAGAGGTGGCGTGAAGCGTATCAGTGGATTGATCTATGAAGAAACCCGAGGAGTTTTGAAGATTTTCCTTGAGAATGTGATTCGTGATGCTGTTACCTACACTGAGCATGCAAGGAGGAAGACGGTGACTGCTATGGATGTGGTCTATGCCTTGAAAAGGCAGGGAAGGACTTTGTACGGTTTCGGAGGTTAG

Protein sequence

MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Homology
[Close]
BLAST of Carg03300 vs. NCBI nr
Match: XP_007132135.1 (hypothetical protein PHAVU_011G069500g, partial [Phaseolus vulgaris] >ESW04129.1 hypothetical protein PHAVU_011G069500g, partial [Phaseolus vulgaris])

HSP 1 Score: 199.5 bits (506), Expect = 5.5e-48
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 82  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 141

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 142 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 184

[Close]
BLAST of Carg03300 vs. NCBI nr
Match: XP_007133241.1 (hypothetical protein PHAVU_011G163600g, partial [Phaseolus vulgaris] >ESW05235.1 hypothetical protein PHAVU_011G163600g, partial [Phaseolus vulgaris])

HSP 1 Score: 199.5 bits (506), Expect = 5.5e-48
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 4   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 63

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 64  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 106

[Close]
BLAST of Carg03300 vs. NCBI nr
Match: XP_007133245.1 (hypothetical protein PHAVU_011G164000g [Phaseolus vulgaris] >ESW05239.1 hypothetical protein PHAVU_011G164000g [Phaseolus vulgaris])

HSP 1 Score: 199.5 bits (506), Expect = 5.5e-48
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 24  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 83

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 84  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 126

[Close]
BLAST of Carg03300 vs. NCBI nr
Match: XP_007133251.1 (hypothetical protein PHAVU_011G164600g [Phaseolus vulgaris] >ESW05245.1 hypothetical protein PHAVU_011G164600g [Phaseolus vulgaris])

HSP 1 Score: 199.5 bits (506), Expect = 5.5e-48
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 142 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 201

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 202 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 244

[Close]
BLAST of Carg03300 vs. NCBI nr
Match: ACG30677.1 (histone H4 [Zea mays])

HSP 1 Score: 199.5 bits (506), Expect = 5.5e-48
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]
BLAST of Carg03300 vs. TAIR10
Match: AT1G07660.1 (Histone superfamily protein)

HSP 1 Score: 199.5 bits (506), Expect = 9.9e-52
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]
BLAST of Carg03300 vs. TAIR10
Match: AT1G07820.1 (Histone superfamily protein)

HSP 1 Score: 199.5 bits (506), Expect = 9.9e-52
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]
BLAST of Carg03300 vs. TAIR10
Match: AT2G28740.1 (histone H4)

HSP 1 Score: 199.5 bits (506), Expect = 9.9e-52
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]
BLAST of Carg03300 vs. TAIR10
Match: AT3G45930.1 (Histone superfamily protein)

HSP 1 Score: 199.5 bits (506), Expect = 9.9e-52
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]
BLAST of Carg03300 vs. TAIR10
Match: AT3G53730.1 (Histone superfamily protein)

HSP 1 Score: 199.5 bits (506), Expect = 9.9e-52
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]
BLAST of Carg03300 vs. Swiss-Prot
Match: sp|P62785|H41_WHEAT (Histone H4 variant TH011 OS=Triticum aestivum OX=4565 PE=3 SV=2)

HSP 1 Score: 199.5 bits (506), Expect = 1.8e-50
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]
BLAST of Carg03300 vs. Swiss-Prot
Match: sp|P59259|H4_ARATH (Histone H4 OS=Arabidopsis thaliana OX=3702 GN=At1g07660 PE=1 SV=2)

HSP 1 Score: 199.5 bits (506), Expect = 1.8e-50
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]
BLAST of Carg03300 vs. Swiss-Prot
Match: sp|Q6PMI5|H4_CHEMJ (Histone H4 OS=Chelidonium majus OX=71251 PE=3 SV=3)

HSP 1 Score: 199.5 bits (506), Expect = 1.8e-50
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]
BLAST of Carg03300 vs. Swiss-Prot
Match: sp|Q6WZ83|H4_EUCGL (Histone H4 OS=Eucalyptus globulus OX=34317 PE=3 SV=3)

HSP 1 Score: 199.5 bits (506), Expect = 1.8e-50
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]
BLAST of Carg03300 vs. Swiss-Prot
Match: sp|Q6LAF3|H4_FLATR (Histone H4 OS=Flaveria trinervia OX=4227 GN=hh4 PE=3 SV=3)

HSP 1 Score: 199.5 bits (506), Expect = 1.8e-50
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]
BLAST of Carg03300 vs. TrEMBL
Match: tr|A0A2T7EVL0|A0A2T7EVL0_9POAL (Uncharacterized protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_1G343000 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 3.6e-48
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]
BLAST of Carg03300 vs. TrEMBL
Match: tr|A0A2P5EB67|A0A2P5EB67_9ROSA (Histone H4 OS=Trema orientalis OX=63057 GN=TorRG33x02_062180 PE=3 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 3.6e-48
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]
BLAST of Carg03300 vs. TrEMBL
Match: tr|M7ZBJ8|M7ZBJ8_TRIUA (Histone H4 OS=Triticum urartu OX=4572 GN=TRIUR3_04192 PE=3 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 3.6e-48
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]
BLAST of Carg03300 vs. TrEMBL
Match: tr|A0A1U8GX93|A0A1U8GX93_CAPAN (Histone H4 OS=Capsicum annuum OX=4072 GN=T459_16119 PE=3 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 3.6e-48
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]
BLAST of Carg03300 vs. TrEMBL
Match: tr|A0A1S4AKB5|A0A1S4AKB5_TOBAC (Histone H4 OS=Nicotiana tabacum OX=4097 GN=LOC107798555 PE=3 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 3.6e-48
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

The following BLAST results are available for this feature:
BLAST of Carg03300 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_007132135.15.5e-48100.00hypothetical protein PHAVU_011G069500g, partial [Phaseolus vulgaris] >ESW04129.1... [more]
XP_007133241.15.5e-48100.00hypothetical protein PHAVU_011G163600g, partial [Phaseolus vulgaris] >ESW05235.1... [more]
XP_007133245.15.5e-48100.00hypothetical protein PHAVU_011G164000g [Phaseolus vulgaris] >ESW05239.1 hypothet... [more]
XP_007133251.15.5e-48100.00hypothetical protein PHAVU_011G164600g [Phaseolus vulgaris] >ESW05245.1 hypothet... [more]
ACG30677.15.5e-48100.00histone H4 [Zea mays][more]
BLAST of Carg03300 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G07660.19.9e-52100.00Histone superfamily protein[more]
AT1G07820.19.9e-52100.00Histone superfamily protein[more]
AT2G28740.19.9e-52100.00histone H4[more]
AT3G45930.19.9e-52100.00Histone superfamily protein[more]
AT3G53730.19.9e-52100.00Histone superfamily protein[more]
BLAST of Carg03300 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P62785|H41_WHEAT1.8e-50100.00Histone H4 variant TH011 OS=Triticum aestivum OX=4565 PE=3 SV=2[more]
sp|P59259|H4_ARATH1.8e-50100.00Histone H4 OS=Arabidopsis thaliana OX=3702 GN=At1g07660 PE=1 SV=2[more]
sp|Q6PMI5|H4_CHEMJ1.8e-50100.00Histone H4 OS=Chelidonium majus OX=71251 PE=3 SV=3[more]
sp|Q6WZ83|H4_EUCGL1.8e-50100.00Histone H4 OS=Eucalyptus globulus OX=34317 PE=3 SV=3[more]
sp|Q6LAF3|H4_FLATR1.8e-50100.00Histone H4 OS=Flaveria trinervia OX=4227 GN=hh4 PE=3 SV=3[more]
BLAST of Carg03300 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A2T7EVL0|A0A2T7EVL0_9POAL3.6e-48100.00Uncharacterized protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_1G34300... [more]
tr|A0A2P5EB67|A0A2P5EB67_9ROSA3.6e-48100.00Histone H4 OS=Trema orientalis OX=63057 GN=TorRG33x02_062180 PE=3 SV=1[more]
tr|M7ZBJ8|M7ZBJ8_TRIUA3.6e-48100.00Histone H4 OS=Triticum urartu OX=4572 GN=TRIUR3_04192 PE=3 SV=1[more]
tr|A0A1U8GX93|A0A1U8GX93_CAPAN3.6e-48100.00Histone H4 OS=Capsicum annuum OX=4072 GN=T459_16119 PE=3 SV=1[more]
tr|A0A1S4AKB5|A0A1S4AKB5_TOBAC3.6e-48100.00Histone H4 OS=Nicotiana tabacum OX=4097 GN=LOC107798555 PE=3 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006334nucleosome assembly
Vocabulary: Molecular Function
TermDefinition
GO:0046982protein heterodimerization activity
GO:0003677DNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0000786nucleosome
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR019809Histone_H4_CS
IPR009072Histone-fold
IPR035425CENP-T/H4_C
IPR001951Histone_H4
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006334 nucleosome assembly
cellular_component GO:0000786 nucleosome
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0046982 protein heterodimerization activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg03300-RACarg03300-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001951Histone H4PRINTSPR00623HISTONEH4coord: 89..100
score: 97.79
coord: 5..16
score: 95.59
coord: 77..89
score: 90.05
coord: 20..39
score: 93.38
coord: 40..60
score: 93.56
coord: 62..76
score: 95.1
IPR001951Histone H4SMARTSM00417h44coord: 16..90
e-value: 2.0E-29
score: 113.7
IPR001951Histone H4CDDcd00076H4coord: 18..101
e-value: 1.32401E-41
score: 133.01
IPR035425CENP-T/Histone H4, histone foldPFAMPF15511CENP-T_Ccoord: 35..96
e-value: 1.4E-8
score: 34.7
IPR009072Histone-foldGENE3DG3DSA:1.10.20.10coord: 2..103
e-value: 1.7E-60
score: 203.5
IPR009072Histone-foldSUPERFAMILYSSF47113Histone-foldcoord: 3..102
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availablePANTHERPTHR10484:SF160SUBFAMILY NOT NAMEDcoord: 1..103
NoneNo IPR availablePANTHERPTHR10484HISTONE H4coord: 1..103
IPR019809Histone H4, conserved sitePROSITEPS00047HISTONE_H4coord: 15..19

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg03300CmaCh02G008160Cucurbita maxima (Rimu)carcmaB0477
Carg03300CsGy6G014510Cucumber (Gy14) v2carcgybB0350
Carg03300CsaV3_6G017040Cucumber (Chinese Long) v3carcucB0374
Carg03300Cla97C02G046300Watermelon (97103) v2carwmbB0346
Carg03300Bhi10G000548Wax gourdcarwgoB0419
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg03300Carg12320Silver-seed gourdcarcarB354
The following block(s) are covering this gene:
GeneOrganismBlock
Carg03300Cucumber (Chinese Long) v2carcuB0359
Carg03300Silver-seed gourdcarcarB186
Carg03300Silver-seed gourdcarcarB330
Carg03300Silver-seed gourdcarcarB353
Carg03300Silver-seed gourdcarcarB356
Carg03300Silver-seed gourdcarcarB360
Carg03300Silver-seed gourdcarcarB367
Carg03300Cucumber (Gy14) v2carcgybB0341
Carg03300Cucumber (Gy14) v2carcgybB0345
Carg03300Cucumber (Gy14) v1carcgyB0389
Carg03300Cucumber (Gy14) v1carcgyB0397
Carg03300Cucumber (Gy14) v1carcgyB0396
Carg03300Cucumber (Gy14) v1carcgyB0398
Carg03300Cucurbita maxima (Rimu)carcmaB0469
Carg03300Cucurbita maxima (Rimu)carcmaB0470
Carg03300Cucurbita maxima (Rimu)carcmaB0473
Carg03300Cucurbita maxima (Rimu)carcmaB0479
Carg03300Cucurbita maxima (Rimu)carcmaB0481
Carg03300Cucurbita maxima (Rimu)carcmaB0482
Carg03300Cucurbita moschata (Rifu)carcmoB0461
Carg03300Cucurbita moschata (Rifu)carcmoB0464
Carg03300Cucurbita moschata (Rifu)carcmoB0467
Carg03300Cucurbita moschata (Rifu)carcmoB0469
Carg03300Cucurbita pepo (Zucchini)carcpeB0462
Carg03300Cucurbita pepo (Zucchini)carcpeB0465
Carg03300Cucurbita pepo (Zucchini)carcpeB0468
Carg03300Cucurbita pepo (Zucchini)carcpeB0469
Carg03300Cucurbita pepo (Zucchini)carcpeB0471
Carg03300Cucurbita pepo (Zucchini)carcpeB0472
Carg03300Cucurbita pepo (Zucchini)carcpeB0475
Carg03300Cucurbita pepo (Zucchini)carcpeB0481
Carg03300Wild cucumber (PI 183967)carcpiB0363
Carg03300Wild cucumber (PI 183967)carcpiB0365
Carg03300Wild cucumber (PI 183967)carcpiB0367
Carg03300Wild cucumber (PI 183967)carcpiB0369
Carg03300Wild cucumber (PI 183967)carcpiB0373
Carg03300Cucumber (Chinese Long) v2carcuB0362
Carg03300Cucumber (Chinese Long) v2carcuB0364
Carg03300Cucumber (Chinese Long) v2carcuB0366
Carg03300Cucumber (Chinese Long) v2carcuB0370
Carg03300Cucumber (Chinese Long) v3carcucB0364
Carg03300Cucumber (Chinese Long) v3carcucB0366
Carg03300Cucumber (Chinese Long) v3carcucB0368
Carg03300Bottle gourd (USVL1VR-Ls)carlsiB303
Carg03300Bottle gourd (USVL1VR-Ls)carlsiB308
Carg03300Bottle gourd (USVL1VR-Ls)carlsiB309
Carg03300Bottle gourd (USVL1VR-Ls)carlsiB311
Carg03300Melon (DHL92) v3.5.1carmeB0338
Carg03300Melon (DHL92) v3.5.1carmeB0339
Carg03300Melon (DHL92) v3.5.1carmeB0346
Carg03300Melon (DHL92) v3.5.1carmeB0348
Carg03300Melon (DHL92) v3.6.1carmedB0344
Carg03300Melon (DHL92) v3.6.1carmedB0345
Carg03300Melon (DHL92) v3.6.1carmedB0353
Carg03300Melon (DHL92) v3.6.1carmedB0354
Carg03300Watermelon (Charleston Gray)carwcgB0323
Carg03300Watermelon (Charleston Gray)carwcgB0327
Carg03300Watermelon (Charleston Gray)carwcgB0331
Carg03300Watermelon (Charleston Gray)carwcgB0332
Carg03300Watermelon (97103) v1carwmB0321
Carg03300Watermelon (97103) v1carwmB0323
Carg03300Watermelon (97103) v1carwmB0325
Carg03300Watermelon (97103) v1carwmB0330
Carg03300Watermelon (97103) v2carwmbB0341
Carg03300Watermelon (97103) v2carwmbB0351
Carg03300Watermelon (97103) v2carwmbB0352
Carg03300Watermelon (97103) v2carwmbB0354
Carg03300Wax gourdcarwgoB0416
Carg03300Wax gourdcarwgoB0426