Carg02992 (gene) Silver-seed gourd

Overview
NameCarg02992
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionE3 ubiquitin-protein ligase ATL15-like
LocationCucurbita_argyrosperma_scaffold_008 : 1212047 .. 1213174 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTCCAGTGATGGTAATCAGGAAGAGGAATCACGGTGTCGCTGGCCGATTATTGTTGATTCTGTTGCTGCAAGCCGCCGCCACCGCCGCCGCGCAGGAGACAGGAGCTGGAACGATACCGGTATCGTCGGAGCCGGAGATCAGTAAGAATATGGCGATCGCATTTGTTGCGTTGATATCCGCCTTCTTCGTCCTCGGCATCGTCTCTGTCTACACGCGCCGCTGCAGAGAGCGGCGATTTGGAAGAGGTTTAGGAATTGGAATCGAGGGGAGAGATGGCGGTGGCGGCGGCGGCGGCGGAGGCATGCCGTGGAGGCCGGTGCGTGGATTGGATCCGGCGTTCATCGCGACATTTCCGACTTTTGTGTACTCGACGGTGAAAGGGCTAAAAATCGGAAAAAGCTCACTGGAATGCGCCGTTTGCTTGAATGAATTTGAAAATAGTGATCGGCTGCGTTTGATTCCGAAGTGTAGCCATGTTTTTCACTCTGTTTGTGTTGATGCTTGGTTAGTTTCGCACTCGACTTGTCCTGTTTGCAGAGCTAATCTCTGTCCTAAACCCGGCGACGGAACATTGTCGATGATTAACTTCGATCCGGCCGCCGGCTCAGAACGAACCGGTAGCGTACCGTCTCCGTCGCCATCTCCGTCGCCGAACCATGTATCCATTCCGGTGGTTGACGATCTCCGTGCCGGAGAAGAAGCGACAGTACAGGCAAATGTGACGAATCCGAGTCCGGTGCCGACCCGGAGCACCCCTACGCGGTCGAGGTCGTTGGGATGGCGGTTGAGTGGAATATTTCAGCGGTCTAATTCAACCGGTCATGACCGATTCACTTTGCGGTTGCCGGATGCGGTCCGGAGTCAGCTGATGAACTCGACGTTGAACCGGACCAGAAGCTGGGCGGAGTTACCGAGAGAGCAGAGTTTGCGACGGGGATATCGGGGTGGAATCGGAGAAAATGGCCGGTGGAGGAATTTCCTTCAGCGGACGTTTTCGGTGCCGGCGCAGATCGTCGGAAGGGTTGCCGGAACTGGGCGGTCTCCGGTGCATGAGGACCGCGGTGAGAGGTCGTTTGCACGGCTGACGCCGAGTGGTATTGGTCCAAGTACGGTGGCGGATTAG

mRNA sequence

ATGATTCCAGTGATGGTAATCAGGAAGAGGAATCACGGTGTCGCTGGCCGATTATTGTTGATTCTGTTGCTGCAAGCCGCCGCCACCGCCGCCGCGCAGGAGACAGGAGCTGGAACGATACCGGTATCGTCGGAGCCGGAGATCAGTAAGAATATGGCGATCGCATTTGTTGCGTTGATATCCGCCTTCTTCGTCCTCGGCATCGTCTCTGTCTACACGCGCCGCTGCAGAGAGCGGCGATTTGGAAGAGGTTTAGGAATTGGAATCGAGGGGAGAGATGGCGGTGGCGGCGGCGGCGGCGGAGGCATGCCGTGGAGGCCGGTGCGTGGATTGGATCCGGCGTTCATCGCGACATTTCCGACTTTTGTGTACTCGACGGTGAAAGGGCTAAAAATCGGAAAAAGCTCACTGGAATGCGCCGTTTGCTTGAATGAATTTGAAAATAGTGATCGGCTGCGTTTGATTCCGAAGTGTAGCCATGTTTTTCACTCTGTTTGTGTTGATGCTTGGTTAGTTTCGCACTCGACTTGTCCTGTTTGCAGAGCTAATCTCTGTCCTAAACCCGGCGACGGAACATTGTCGATGATTAACTTCGATCCGGCCGCCGGCTCAGAACGAACCGGTAGCGTACCGTCTCCGTCGCCATCTCCGTCGCCGAACCATGTATCCATTCCGGTGGTTGACGATCTCCGTGCCGGAGAAGAAGCGACAGTACAGGCAAATGTGACGAATCCGAGTCCGGTGCCGACCCGGAGCACCCCTACGCGGTCGAGGTCGTTGGGATGGCGGTTGAGTGGAATATTTCAGCGGTCTAATTCAACCGGTCATGACCGATTCACTTTGCGGTTGCCGGATGCGGTCCGGAGTCAGCTGATGAACTCGACGTTGAACCGGACCAGAAGCTGGGCGGAGTTACCGAGAGAGCAGAGTTTGCGACGGGGATATCGGGGTGGAATCGGAGAAAATGGCCGGTGGAGGAATTTCCTTCAGCGGACGTTTTCGGTGCCGGCGCAGATCGTCGGAAGGGTTGCCGGAACTGGGCGGTCTCCGGTGCATGAGGACCGCGGTGAGAGGTCGTTTGCACGGCTGACGCCGAGTGGTATTGGTCCAAGTACGGTGGCGGATTAG

Coding sequence (CDS)

ATGATTCCAGTGATGGTAATCAGGAAGAGGAATCACGGTGTCGCTGGCCGATTATTGTTGATTCTGTTGCTGCAAGCCGCCGCCACCGCCGCCGCGCAGGAGACAGGAGCTGGAACGATACCGGTATCGTCGGAGCCGGAGATCAGTAAGAATATGGCGATCGCATTTGTTGCGTTGATATCCGCCTTCTTCGTCCTCGGCATCGTCTCTGTCTACACGCGCCGCTGCAGAGAGCGGCGATTTGGAAGAGGTTTAGGAATTGGAATCGAGGGGAGAGATGGCGGTGGCGGCGGCGGCGGCGGAGGCATGCCGTGGAGGCCGGTGCGTGGATTGGATCCGGCGTTCATCGCGACATTTCCGACTTTTGTGTACTCGACGGTGAAAGGGCTAAAAATCGGAAAAAGCTCACTGGAATGCGCCGTTTGCTTGAATGAATTTGAAAATAGTGATCGGCTGCGTTTGATTCCGAAGTGTAGCCATGTTTTTCACTCTGTTTGTGTTGATGCTTGGTTAGTTTCGCACTCGACTTGTCCTGTTTGCAGAGCTAATCTCTGTCCTAAACCCGGCGACGGAACATTGTCGATGATTAACTTCGATCCGGCCGCCGGCTCAGAACGAACCGGTAGCGTACCGTCTCCGTCGCCATCTCCGTCGCCGAACCATGTATCCATTCCGGTGGTTGACGATCTCCGTGCCGGAGAAGAAGCGACAGTACAGGCAAATGTGACGAATCCGAGTCCGGTGCCGACCCGGAGCACCCCTACGCGGTCGAGGTCGTTGGGATGGCGGTTGAGTGGAATATTTCAGCGGTCTAATTCAACCGGTCATGACCGATTCACTTTGCGGTTGCCGGATGCGGTCCGGAGTCAGCTGATGAACTCGACGTTGAACCGGACCAGAAGCTGGGCGGAGTTACCGAGAGAGCAGAGTTTGCGACGGGGATATCGGGGTGGAATCGGAGAAAATGGCCGGTGGAGGAATTTCCTTCAGCGGACGTTTTCGGTGCCGGCGCAGATCGTCGGAAGGGTTGCCGGAACTGGGCGGTCTCCGGTGCATGAGGACCGCGGTGAGAGGTCGTTTGCACGGCTGACGCCGAGTGGTATTGGTCCAAGTACGGTGGCGGATTAG

Protein sequence

MIPVMVIRKRNHGVAGRLLLILLLQAAATAAAQETGAGTIPVSSEPEISKNMAIAFVALISAFFVLGIVSVYTRRCRERRFGRGLGIGIEGRDGGGGGGGGGMPWRPVRGLDPAFIATFPTFVYSTVKGLKIGKSSLECAVCLNEFENSDRLRLIPKCSHVFHSVCVDAWLVSHSTCPVCRANLCPKPGDGTLSMINFDPAAGSERTGSVPSPSPSPSPNHVSIPVVDDLRAGEEATVQANVTNPSPVPTRSTPTRSRSLGWRLSGIFQRSNSTGHDRFTLRLPDAVRSQLMNSTLNRTRSWAELPREQSLRRGYRGGIGENGRWRNFLQRTFSVPAQIVGRVAGTGRSPVHEDRGERSFARLTPSGIGPSTVAD
Homology
[Close]
BLAST of Carg02992 vs. NCBI nr
Match: XP_022937389.1 (RING-H2 finger protein ATL11-like [Cucurbita moschata])

HSP 1 Score: 642.5 bits (1656), Expect = 8.9e-181
Identity = 352/375 (93.87%), Postives = 354/375 (94.40%), Query Frame = 0 

Query: 1   MIPVMVIRKRNHGVAGRLXXXXXXXXXXXXXXXETGAGTIPVSSEPEISKNMAIAFVALI 60
           MIPVMVIRKRNHGVAGR XXXXXXXXXXXXXXX TGAGTIPVSSEPEISKNMAIAFVALI
Sbjct: 1   MIPVMVIRKRNHGVAGRXXXXXXXXXXXXXXXXXTGAGTIPVSSEPEISKNMAIAFVALI 60

Query: 61  SAFFVLGIVSVYTRRCRERRFGRXXXXXXXXXXXXXXXXXXXMPWRPVRGLDPAFIATFP 120
           SAFFVLGIVSVYTRRCRERRFGR                   MPWRPVRGLDPAFIATFP
Sbjct: 61  SAFFVLGIVSVYTRRCRERRFGR----GLGIGIEGRDGGGGGMPWRPVRGLDPAFIATFP 120

Query: 121 TFVYSTVKGLKIGKSSLECAVCLNEFENSDRLRLIPKCSHVFHSVCVDAWLVSHSTCPVC 180
           TFVYSTVKGLKIGKSSLECAVCLNEFENSDRLRLIPKCSHVFHSVCVDAWLVSHSTCPVC
Sbjct: 121 TFVYSTVKGLKIGKSSLECAVCLNEFENSDRLRLIPKCSHVFHSVCVDAWLVSHSTCPVC 180

Query: 181 RANLCPKPGDGTLSMINFDPAAGSERTGSVPXXXXXXXXXXVSIPVVDDLRAGEEATVQA 240
           RANLCPKPGDGTLSMINFDPAAGSERTGSVPXXXXXXXXXXVSIPVVDDLRAGEEATVQA
Sbjct: 181 RANLCPKPGDGTLSMINFDPAAGSERTGSVPXXXXXXXXXXVSIPVVDDLRAGEEATVQA 240

Query: 241 NVTNPSPVPTRSTPTRSRSLGWRLSGIFQRSNSTGHDRFTLRLPDAVRSQLMNSTLNRTR 300
           NVTNPSPVPTRSTPTRSRSLGWRLSGIFQRSNSTGHDRFTLRLPDAVRSQL+NSTLNRTR
Sbjct: 241 NVTNPSPVPTRSTPTRSRSLGWRLSGIFQRSNSTGHDRFTLRLPDAVRSQLINSTLNRTR 300

Query: 301 SWAELPREQSLRRGYRGGIGENGRWRNFLQRTFSVPAQIVGRVAGTGRSPVHEDRGERSF 360
           SWAELPREQSLRRGYRGGIGENGRWRNFLQRTFSVPAQ+VGRVAGTGRSPVHEDRGERSF
Sbjct: 301 SWAELPREQSLRRGYRGGIGENGRWRNFLQRTFSVPAQVVGRVAGTGRSPVHEDRGERSF 360

Query: 361 ARLTPSGIGPSTVAD 376
           ARLTPSGIGPSTVAD
Sbjct: 361 ARLTPSGIGPSTVAD 371

[Close]
BLAST of Carg02992 vs. NCBI nr
Match: XP_022975950.1 (RING-H2 finger protein ATL11-like [Cucurbita maxima])

HSP 1 Score: 630.2 bits (1624), Expect = 4.6e-177
Identity = 364/375 (97.07%), Postives = 367/375 (97.87%), Query Frame = 0 

Query: 1   MIPVMVIRKRNHGVAGRLXXXXXXXXXXXXXXXETGAGTIPVSSEPEISKNMAIAFVALI 60
           MIPVMVIRKRNHGVA R XXXXXXXXXXXXXXX TGAGTIPVSSEPEISKNMAIAFVALI
Sbjct: 1   MIPVMVIRKRNHGVACR-XXXXXXXXXXXXXXXXTGAGTIPVSSEPEISKNMAIAFVALI 60

Query: 61  SAFFVLGIVSVYTRRCRERRFGRXXXXXXXXXXXXXXXXXXXMPWRPVRGLDPAFIATFP 120
           SAFFVLGIVSVYTRRCRERRFGR  XXXXXXXXXXXXXXXXX+PWRPVRGLDPAFIATFP
Sbjct: 61  SAFFVLGIVSVYTRRCRERRFGRGSXXXXXXXXXXXXXXXXXLPWRPVRGLDPAFIATFP 120

Query: 121 TFVYSTVKGLKIGKSSLECAVCLNEFENSDRLRLIPKCSHVFHSVCVDAWLVSHSTCPVC 180
           TFVYSTVKGLKIGKSSLECAVCLNEFENSDRLRLIPKCSHVFHSVCVDAWLVSHSTCPVC
Sbjct: 121 TFVYSTVKGLKIGKSSLECAVCLNEFENSDRLRLIPKCSHVFHSVCVDAWLVSHSTCPVC 180

Query: 181 RANLCPKPGDGTLSMINFDPAAGSERTGSVPXXXXXXXXXXVSIPVVDDLRAGEEATVQA 240
           RANLCPKPGD TLS INFDPAAGSERTGSVPXXXXXXXXXXVSIPVVDDLRAGEEATV+A
Sbjct: 181 RANLCPKPGDVTLSTINFDPAAGSERTGSVPXXXXXXXXXXVSIPVVDDLRAGEEATVEA 240

Query: 241 NVTNPSPVPTRSTPTRSRSLGWRLSGIFQRSNSTGHDRFTLRLPDAVRSQLMNSTLNRTR 300
           NVTNPSPVP RSTPTRSRSLGWRLSGIFQRSNSTGHDRFTLRLPDAVRSQLMNSTLNRTR
Sbjct: 241 NVTNPSPVPIRSTPTRSRSLGWRLSGIFQRSNSTGHDRFTLRLPDAVRSQLMNSTLNRTR 300

Query: 301 SWAELPREQSLRRGYRGGIGENGRWRNFLQRTFSVPAQIVGRVAGTGRSPVHEDRGERSF 360
           SWAELPREQSLRRGYRGGIGENGRWRNFLQRTFSVPAQ+VGRVAGTGRSPVHEDRGERSF
Sbjct: 301 SWAELPREQSLRRGYRGGIGENGRWRNFLQRTFSVPAQVVGRVAGTGRSPVHEDRGERSF 360

Query: 361 ARLTPSGIGPSTVAD 376
           ARLTPSGIGPSTVAD
Sbjct: 361 ARLTPSGIGPSTVAD 374

[Close]
BLAST of Carg02992 vs. NCBI nr
Match: XP_023536280.1 (RING-H2 finger protein ATL11-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 624.0 bits (1608), Expect = 3.3e-175
Identity = 356/375 (94.93%), Postives = 358/375 (95.47%), Query Frame = 0 

Query: 1   MIPVMVIRKRNHGVAGRLXXXXXXXXXXXXXXXETGAGTIPVSSEPEISKNMAIAFVALI 60
           MIPVMVIRKRNHGVA R  XXXXXXXXXXXXXX TGAGTIPVSSEPEISKNMAIAFVALI
Sbjct: 1   MIPVMVIRKRNHGVACR--XXXXXXXXXXXXXXXTGAGTIPVSSEPEISKNMAIAFVALI 60

Query: 61  SAFFVLGIVSVYTRRCRERRFGRXXXXXXXXXXXXXXXXXXXMPWRPVRGLDPAFIATFP 120
           SAFFVLGIVSVYTRRCRERRFGRXXXXXXXXXXXXXXXXXXXMPWRP RGLDPAFIATFP
Sbjct: 61  SAFFVLGIVSVYTRRCRERRFGRXXXXXXXXXXXXXXXXXXXMPWRPARGLDPAFIATFP 120

Query: 121 TFVYSTVKGLKIGKSSLECAVCLNEFENSDRLRLIPKCSHVFHSVCVDAWLVSHSTCPVC 180
           TFVYSTVKGLKIGKSSLECAVCLNEFENSDRLRLIPKCSHVFHSVCVDAWLVSHSTCPVC
Sbjct: 121 TFVYSTVKGLKIGKSSLECAVCLNEFENSDRLRLIPKCSHVFHSVCVDAWLVSHSTCPVC 180

Query: 181 RANLCPKPGDGTLSMINFDPAAGSERTGSVPXXXXXXXXXXVSIPVVDDLRAGEEATVQA 240
           RANLCPKPGD TLSMINFDP AGSERTGSVP     XX   VSIPVVDDLRAGEEA V+A
Sbjct: 181 RANLCPKPGDVTLSMINFDP-AGSERTGSVPSPLPSXXPNHVSIPVVDDLRAGEEARVEA 240

Query: 241 NVTNPSPVPTRSTPTRSRSLGWRLSGIFQRSNSTGHDRFTLRLPDAVRSQLMNSTLNRTR 300
           NVTNPSPVPTRSTPTRSRSLGWRLSGIFQRSNSTGHDRFTLRLPDAVRSQLMNSTLNRTR
Sbjct: 241 NVTNPSPVPTRSTPTRSRSLGWRLSGIFQRSNSTGHDRFTLRLPDAVRSQLMNSTLNRTR 300

Query: 301 SWAELPREQSLRRGYRGGIGENGRWRNFLQRTFSVPAQIVGRVAGTGRSPVHEDRGERSF 360
           SWAELPREQSLRRGYRGGIGENGRWRNFL RTFSVPAQ+VGRVAGTGRSPVHEDRGERSF
Sbjct: 301 SWAELPREQSLRRGYRGGIGENGRWRNFLHRTFSVPAQVVGRVAGTGRSPVHEDRGERSF 360

Query: 361 ARLTPSGIGPSTVAD 376
           ARLTPSGIGPSTVAD
Sbjct: 361 ARLTPSGIGPSTVAD 372

[Close]
BLAST of Carg02992 vs. NCBI nr
Match: XP_004136427.2 (PREDICTED: RING-H2 finger protein ATL11-like [Cucumis sativus] >KGN60240.1 hypothetical protein Csa_3G889960 [Cucumis sativus])

HSP 1 Score: 487.6 bits (1254), Expect = 3.7e-134
Identity = 295/380 (77.63%), Postives = 315/380 (82.89%), Query Frame = 0 

Query: 1   MIPVMVIRKRNHGVAGRL---XXXXXXXXXXXXXXXETGAGTIPVSSEPEISKNMAIAFV 60
           MI +MVI K+NH +  +    XXXXXXXXXXXXXXX  G GTIPVSSEPE+SK MAIAFV
Sbjct: 1   MITIMVIGKKNHVLTCQFXXXXXXXXXXXXXXXXXXXAGTGTIPVSSEPEVSKTMAIAFV 60

Query: 61  ALISAFFVLGIVSVYTRRCRERRFGRXXXXXXXXXXXXXXXXXXXMPWRPVRGLDPAFIA 120
           ALIS FFVLGIVS+YTRRCRERR G       XXXXXXXXXXXXX+PWRP RGLDPAFIA
Sbjct: 61  ALISGFFVLGIVSIYTRRCRERRMG------GXXXXXXXXXXXXXVPWRPSRGLDPAFIA 120

Query: 121 TFPTFVYSTVKGLKIGKSSLECAVCLNEFENSDRLRLIPKCSHVFHSVCVDAWLVSHSTC 180
           TFPTFVYS VKGLKIGKSSLECAVCLNEFENSD LRLIPKCSHVFHS CVDAWL+SHSTC
Sbjct: 121 TFPTFVYSKVKGLKIGKSSLECAVCLNEFENSDMLRLIPKCSHVFHSGCVDAWLISHSTC 180

Query: 181 PVCRANLCPKPGDGTLSMINFDPAAGSERTG--SVPXXXXXXXXXXVSIPVVDDLRAGEE 240
           PVCRANLCPKPG+ TLS+ NFDP+ GSER G    PXXXXXXXX  V+IPVV+D RA  E
Sbjct: 181 PVCRANLCPKPGEVTLSIFNFDPSTGSERIGLEQSPXXXXXXXXNHVTIPVVEDRRAATE 240

Query: 241 ATVQANVTNPSPVPTRSTPTRSRSLGWRLSGIFQRSNSTGHDRFTLRLPDAVRSQLMNST 300
            T   NVTNPSPV   STPTRSRSLGWRLS IFQRSNSTGH+RFTLRLP+AVRSQL+NST
Sbjct: 241 TT---NVTNPSPVANWSTPTRSRSLGWRLSEIFQRSNSTGHERFTLRLPEAVRSQLLNST 300

Query: 301 LNRTRSWAELPREQSLRRGYRGGIGENGRWRNFLQRTFSVPAQIVGRVAGTGRSPVHEDR 360
           LNRTRS AELPR QS RRGYRGG GE+G WR FLQR FS+PA +VGR A  GR PV ED 
Sbjct: 301 LNRTRSLAELPRVQSSRRGYRGGTGESGGWRKFLQRNFSLPAPLVGRTADNGRYPVDEDL 360

Query: 361 GERSFARLTPSGIGPSTVAD 376
           GERSFARLT  G GPST A+
Sbjct: 361 GERSFARLTSRGNGPSTAAE 371

[Close]
BLAST of Carg02992 vs. NCBI nr
Match: XP_008466188.2 (PREDICTED: E3 ubiquitin-protein ligase ATL15-like [Cucumis melo])

HSP 1 Score: 448.0 bits (1151), Expect = 3.2e-122
Identity = 257/326 (78.83%), Postives = 273/326 (83.74%), Query Frame = 0 

Query: 52  MAIAFVALISAFFVLGIVSVYTRRCRERRFGRXXXXXXXXXXXXXXXXXXXMPWRPVRGL 111
           MAIAFVALIS FFVLG+VS+YTRRCRERR        XXXXXXXXXXXXXX+PWRP RGL
Sbjct: 1   MAIAFVALISGFFVLGMVSIYTRRCRERRLA------XXXXXXXXXXXXXXVPWRPSRGL 60

Query: 112 DPAFIATFPTFVYSTVKGLKIGKSSLECAVCLNEFENSDRLRLIPKCSHVFHSVCVDAWL 171
           DPAFIATFPTFVYS VKGLKIGKSSLECAVCLNEFENSD LRLIP+CSHVFHS CVDAWL
Sbjct: 61  DPAFIATFPTFVYSKVKGLKIGKSSLECAVCLNEFENSDMLRLIPECSHVFHSGCVDAWL 120

Query: 172 VSHSTCPVCRANLCPKPGDGTLSMINFDPAAGSERTG--SVPXXXXXXXXXXVSIPVVDD 231
           +SHSTCPVCRANLCPKPG+ TLS+ N DP+ GSER G    P XXXXXXX  V+IPVV+D
Sbjct: 121 ISHSTCPVCRANLCPKPGEVTLSIFNSDPSTGSERIGVERSPTXXXXXXXNHVTIPVVED 180

Query: 232 LRAGEEATVQANVTNPSPVPTRSTPTRSRSLGWRLSGIFQRSNSTGHDRFTLRLPDAVRS 291
            RA  E T   NVTNPSPV  RSTPTRSRSLG RLS IFQRSNSTGH+RFTLRLP+AVRS
Sbjct: 181 RRAATETT---NVTNPSPVANRSTPTRSRSLGRRLSEIFQRSNSTGHERFTLRLPEAVRS 240

Query: 292 QLMNSTLNRTRSWAELPREQSLRRGYRGGIGENGRWRNFLQRTFSVPAQIVGRVAGTGRS 351
           QLMNSTLNRTRS AELPR +S RRG+RGG GENG WRNFLQRTFSVPA +VGR A TGR 
Sbjct: 241 QLMNSTLNRTRSLAELPRVRSSRRGFRGGTGENGGWRNFLQRTFSVPAPVVGRTADTGRH 300

Query: 352 PVHEDRGERSFARLTPSGIGPSTVAD 376
           PV ED GERSFARLT     PST A+
Sbjct: 301 PVDEDLGERSFARLTSRENCPSTAAE 317

[Close]
BLAST of Carg02992 vs. TAIR10
Match: AT1G72200.1 (RING/U-box superfamily protein)

HSP 1 Score: 193.4 bits (490), Expect = 2.6e-49
Identity = 121/299 (40.47%), Postives = 153/299 (51.17%), Query Frame = 0 

Query: 35  TGAGTIPVSSEPEISKNMAIAFVALISAFFVLGIVSVYTRRCRERRFGRXXXXXXXXXXX 94
           T  G+            MAI  + L+S FF LG  SVY RRC ER  G            
Sbjct: 46  THGGSDVSGDSSRFDPTMAILMIVLVSVFFFLGFFSVYIRRCLERVMGMDYGNPNDAGNW 105

Query: 95  XXXXXXXXMPWRPVRGLDPAFIATFPTFVYSTVKGLKIGKSSLECAVCLNEFENSDRLRL 154
                      +  RGLD + I TFPTF YSTVK L+IGK +LEC+VCLNEFE+ + LRL
Sbjct: 106 LATNR------QQARGLDASIIETFPTFQYSTVKTLRIGKEALECSVCLNEFEDDETLRL 165

Query: 155 IPKCSHVFHSVCVDAWLVSHSTCPVCRANLCPKPGDGTLSMINFDPAAGSERTGSVPXXX 214
           IPKC HVFH  C+DAWL SH+TCP+CRA+L P PG+  +S+    P   ++  GS P   
Sbjct: 166 IPKCCHVFHPGCIDAWLRSHTTCPLCRADLIPVPGESIVSI--QIPGLVNDPPGSDPNGD 225

Query: 215 XXXXXXXVSIPVVDDLRAGEEATVQANVTNPSPVPTRSTPTRSRSLGWRLSGIFQRSNST 274
                         D R  E   +  N         +S P RS S GW L+G+F  S+ T
Sbjct: 226 RIRSLGS------PDARLIESVALTCN---------QSMPRRSMSTGWNLAGMFTNSDRT 285

Query: 275 GH-----DRFTLRLPDAVRSQLMNSTLNRTRSWAELPREQSLRRGYRGGIGENGRWRNF 329
           G      DRFTLRLP  + ++L+N  L++      LP+  S  RGYR   G  G  RN+
Sbjct: 286 GQHSENLDRFTLRLPQDIHNKLVNPNLSKVH--VALPQVMSSTRGYR--TGSLGSERNY 317

[Close]
BLAST of Carg02992 vs. TAIR10
Match: AT1G22500.1 (RING/U-box superfamily protein)

HSP 1 Score: 181.4 bits (459), Expect = 1.0e-45
Identity = 108/282 (38.30%), Postives = 149/282 (52.84%), Query Frame = 0 

Query: 49  SKNMAIAFVALISAFFVLGIVSVYTRRCRERRFGRXXXXXXXXXXXXXXXXXXXMPWRPV 108
           S   AI  + L+S FF LG +SVY RRC +   G                      W  V
Sbjct: 36  SPTTAIIMIVLVSVFFALGCISVYMRRCLQHALGMDSGGGPGN-------------WLNV 95

Query: 109 R-----GLDPAFIATFPTFVYSTVKGLKIGKSSLECAVCLNEFENSDRLRLIPKCSHVFH 168
           R     GLD + I TFPTF YSTVK L+IGK +LEC VCLNEFE+ + LRLIP+C HVFH
Sbjct: 96  RQTTEPGLDASVIETFPTFPYSTVKTLRIGKEALECPVCLNEFEDDETLRLIPQCCHVFH 155

Query: 169 SVCVDAWLVSHSTCPVCRANLCPKPGDGTLSMINFDPAAGSERTGSVPXXXXXXXXXXVS 228
             C+DAWL S +TCP+CRANL P PG+   S               +P          + 
Sbjct: 156 PGCIDAWLRSQTTCPLCRANLVPVPGESVSS--------------EIPGLARETGQNSLR 215

Query: 229 IPVVDDLRAGEEATVQANVTNPSPVPTRSTPTRSRSLGWRLSGIFQRSNSTGH-----DR 288
            P+ D+ +    +  +  + + +    +S P +S S GW+L+ ++  ++S G      DR
Sbjct: 216 TPIDDNRKRVLTSPDERLIDSVAWTGNQSMPRKSMSTGWKLAELYSPASSPGQPEENLDR 275

Query: 289 FTLRLPDAVRSQLMNSTLNRTRSWAE--LPREQSLRRGYRGG 319
           +TLRLP  +  QL+NS+L +  S  +  LP+E+S  RG+R G
Sbjct: 276 YTLRLPQEIHDQLVNSSLGKQGSKGQLALPQERSSVRGFRTG 290

[Close]
BLAST of Carg02992 vs. TAIR10
Match: AT4G09120.1 (RING/U-box superfamily protein)

HSP 1 Score: 159.8 bits (403), Expect = 3.2e-39
Identity = 113/288 (39.24%), Postives = 145/288 (50.35%), Query Frame = 0 

Query: 106 RPVRGLDPAFIATFPTFVYSTVKGLKIGKSSLECAVCLNEFENSDRLRLIPKCSHVFHSV 165
           R  RGL+   I +FPTF+YS VKGLKIGK  +ECA+CL+EFE+ + LR +P CSH FH+ 
Sbjct: 90  RARRGLEKEVIESFPTFLYSEVKGLKIGKGGVECAICLSEFEDQETLRWMPPCSHTFHAN 149

Query: 166 CVDAWLVSHSTCPVCRANLCPKPGDGTLSMINFDPAAGSERTGSVPXXXXXXXXXXVSIP 225
           C+D WL S STCPVCRANL  KPG+ +   +N D   G  +                   
Sbjct: 150 CIDVWLSSWSTCPVCRANLSLKPGE-SYPYLNMDVETGGVQ------------------- 209

Query: 226 VVDDLRAGEEATVQANVTNPSPVPTRSTPTRSRSLG----WRLSGIF-QRSNSTGH---- 285
                           + N   +   S  TRSRS G    WR++ IF  RS+STGH    
Sbjct: 210 ---------------KLPNERSLTGNSVTTRSRSTGLLSSWRMAEIFVPRSHSTGHSLVQ 269

Query: 286 ------DRFTLRLPDAVRSQLMNSTLNRTRSWAELPREQSLRRGYRGGI--GENGRW--- 345
                 DRFTL+LP+ V+ QL++  L R RS   LP+  S R+GYR G    E G +   
Sbjct: 270 QLGENLDRFTLQLPEEVQRQLVSLNLIR-RSHIVLPQAVSSRQGYRSGSVGSERGGFSQG 329

Query: 346 ----RNFLQRTFSVPAQI--VGRVAGTGRSPVHEDR--GERSFARLTP 366
               R  L  +FS   Q   V  +         +D+  GERSF RL P
Sbjct: 330 RQTHRRALSMSFSFSFQTASVRSIHDMNDQAQAKDKYFGERSFERLMP 341

[Close]
BLAST of Carg02992 vs. TAIR10
Match: AT3G05200.1 (RING/U-box superfamily protein)

HSP 1 Score: 157.5 bits (397), Expect = 1.6e-38
Identity = 108/288 (37.50%), Postives = 136/288 (47.22%), Query Frame = 0 

Query: 48  ISKNMAIAFVALISAFFVLGIVSVYTRRCRERRFGRXXXXXXXXXXXXXXXXXXXMPWRP 107
           +S  MA+  V LI+A F +G  S+Y R C                               
Sbjct: 45  LSPAMAVIVVILIAALFFMGFFSIYFRHC--------SGVPDAGVSPAGGARSRATVNAA 104

Query: 108 VRGLDPAFIATFPTFVYSTVKGLKIGKSSLECAVCLNEFENSDRLRLIPKCSHVFHSVCV 167
            RGLD + + TFPTF+YS VK  K+GK  LECA+CLNEFE+ + LRL+PKC HVFH  C+
Sbjct: 105 ARGLDVSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCI 164

Query: 168 DAWLVSHSTCPVCRANLCPKPGDGTLSMINFDPAAGSERTGSVPXXXXXXXXXXVSIPVV 227
           DAWL +H TCPVCRANL  +  +G             E  G+ P                
Sbjct: 165 DAWLEAHVTCPVCRANLAEQVAEG----------ESVEPGGTEP---------------- 224

Query: 228 DDLRAGEEATVQANVTNPSPVPTRSTPTR---SRSLGWRLSGI--------FQRSNSTGH 287
                  +  +Q  V NP PV T   P +   S     RL G+        F RS++TGH
Sbjct: 225 -------DLELQQVVVNPEPVVTAPVPEQLVTSEVDSRRLPGVPVDLKRVKFSRSHTTGH 284

Query: 288 ---------DRFTLRLPDAVRSQLMNS-TLNRTRSWAELPREQSLRRG 315
                    +RFTLRLP+ VR ++M    LNRT S   LPR  S RRG
Sbjct: 285 SVVQPGECTERFTLRLPEDVRKRIMKDWKLNRTNSLLVLPRGGSSRRG 291

[Close]
BLAST of Carg02992 vs. TAIR10
Match: AT2G35000.1 (RING/U-box superfamily protein)

HSP 1 Score: 154.1 bits (388), Expect = 1.7e-37
Identity = 115/290 (39.66%), Postives = 144/290 (49.66%), Query Frame = 0 

Query: 109 RGLDPAFIATFPTFVYSTVKGLKIGKSSLECAVCLNEFENSDRLRLIPKCSHVFHSVCVD 168
           RGLD   I TFPTF+YS VK ++IGK  +ECAVCL EFE+ + LRL+P C HVFH+ CVD
Sbjct: 105 RGLDAEAIETFPTFLYSEVKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHADCVD 164

Query: 169 AWLVSHSTCPVCRANLC----PKPGDGTLSMINFDPAAGSERTGSVPXXXXXXXXXXVSI 228
            WL  HSTCP+CRA+L         D T S    DP   S  T                 
Sbjct: 165 VWLSEHSTCPLCRADLVLNQQGDDDDSTESYSGTDPGTISSSTDPERGMV---------- 224

Query: 229 PVVDDLRAGEEATVQANVTNPSPVPTRSTPTRSRSLGWRLSGI-FQRSNSTGH------- 288
                L + +   + A   + S +  RS  T   S  W+++GI F RS+STGH       
Sbjct: 225 -----LESSDAHLLDAVTWSNSNITPRSKSTGLSS--WQITGILFPRSHSTGHSLIQPAG 284

Query: 289 --DRFTLRLPDAVRSQLMNSTLNRTRSW-AELPREQSLRRGYRGG--------------I 348
             DRFTLRLPD VR QLM +  +RT    A LP+ +S R GYR G               
Sbjct: 285 NLDRFTLRLPDDVRRQLMKT--SRTMGHVALLPQARSSRSGYRSGSVGSERSAFPYGRKS 344

Query: 349 GENGRWRNFLQRTFSVPAQIVGRVAGTGRS----PVHEDRGERSFARLTP 366
             N R  + L  +FS  +  V R   +G +    P   + GERSF RL P
Sbjct: 345 NNNNRRLHSLSFSFSFRSGSV-RSTFSGDAPKNLPTSIEAGERSFERLRP 374

[Close]
BLAST of Carg02992 vs. Swiss-Prot
Match: sp|Q84W40|ATL11_ARATH (RING-H2 finger protein ATL11 OS=Arabidopsis thaliana OX=3702 GN=ATL11 PE=2 SV=2)

HSP 1 Score: 193.4 bits (490), Expect = 4.7e-48
Identity = 121/299 (40.47%), Postives = 153/299 (51.17%), Query Frame = 0 

Query: 35  TGAGTIPVSSEPEISKNMAIAFVALISAFFVLGIVSVYTRRCRERRFGRXXXXXXXXXXX 94
           T  G+            MAI  + L+S FF LG  SVY RRC ER  G            
Sbjct: 46  THGGSDVSGDSSRFDPTMAILMIVLVSVFFFLGFFSVYIRRCLERVMGMDYGNPNDAGNW 105

Query: 95  XXXXXXXXMPWRPVRGLDPAFIATFPTFVYSTVKGLKIGKSSLECAVCLNEFENSDRLRL 154
                      +  RGLD + I TFPTF YSTVK L+IGK +LEC+VCLNEFE+ + LRL
Sbjct: 106 LATNR------QQARGLDASIIETFPTFQYSTVKTLRIGKEALECSVCLNEFEDDETLRL 165

Query: 155 IPKCSHVFHSVCVDAWLVSHSTCPVCRANLCPKPGDGTLSMINFDPAAGSERTGSVPXXX 214
           IPKC HVFH  C+DAWL SH+TCP+CRA+L P PG+  +S+    P   ++  GS P   
Sbjct: 166 IPKCCHVFHPGCIDAWLRSHTTCPLCRADLIPVPGESIVSI--QIPGLVNDPPGSDPNGD 225

Query: 215 XXXXXXXVSIPVVDDLRAGEEATVQANVTNPSPVPTRSTPTRSRSLGWRLSGIFQRSNST 274
                         D R  E   +  N         +S P RS S GW L+G+F  S+ T
Sbjct: 226 RIRSLGS------PDARLIESVALTCN---------QSMPRRSMSTGWNLAGMFTNSDRT 285

Query: 275 GH-----DRFTLRLPDAVRSQLMNSTLNRTRSWAELPREQSLRRGYRGGIGENGRWRNF 329
           G      DRFTLRLP  + ++L+N  L++      LP+  S  RGYR   G  G  RN+
Sbjct: 286 GQHSENLDRFTLRLPQDIHNKLVNPNLSKVH--VALPQVMSSTRGYR--TGSLGSERNY 317

[Close]
BLAST of Carg02992 vs. Swiss-Prot
Match: sp|Q9SK92|ATL15_ARATH (E3 ubiquitin-protein ligase ATL15 OS=Arabidopsis thaliana OX=3702 GN=ATL15 PE=1 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.8e-44
Identity = 108/282 (38.30%), Postives = 149/282 (52.84%), Query Frame = 0 

Query: 49  SKNMAIAFVALISAFFVLGIVSVYTRRCRERRFGRXXXXXXXXXXXXXXXXXXXMPWRPV 108
           S   AI  + L+S FF LG +SVY RRC +   G                      W  V
Sbjct: 36  SPTTAIIMIVLVSVFFALGCISVYMRRCLQHALGMDSGGGPGN-------------WLNV 95

Query: 109 R-----GLDPAFIATFPTFVYSTVKGLKIGKSSLECAVCLNEFENSDRLRLIPKCSHVFH 168
           R     GLD + I TFPTF YSTVK L+IGK +LEC VCLNEFE+ + LRLIP+C HVFH
Sbjct: 96  RQTTEPGLDASVIETFPTFPYSTVKTLRIGKEALECPVCLNEFEDDETLRLIPQCCHVFH 155

Query: 169 SVCVDAWLVSHSTCPVCRANLCPKPGDGTLSMINFDPAAGSERTGSVPXXXXXXXXXXVS 228
             C+DAWL S +TCP+CRANL P PG+   S               +P          + 
Sbjct: 156 PGCIDAWLRSQTTCPLCRANLVPVPGESVSS--------------EIPGLARETGQNSLR 215

Query: 229 IPVVDDLRAGEEATVQANVTNPSPVPTRSTPTRSRSLGWRLSGIFQRSNSTGH-----DR 288
            P+ D+ +    +  +  + + +    +S P +S S GW+L+ ++  ++S G      DR
Sbjct: 216 TPIDDNRKRVLTSPDERLIDSVAWTGNQSMPRKSMSTGWKLAELYSPASSPGQPEENLDR 275

Query: 289 FTLRLPDAVRSQLMNSTLNRTRSWAE--LPREQSLRRGYRGG 319
           +TLRLP  +  QL+NS+L +  S  +  LP+E+S  RG+R G
Sbjct: 276 YTLRLPQEIHDQLVNSSLGKQGSKGQLALPQERSSVRGFRTG 290

[Close]
BLAST of Carg02992 vs. Swiss-Prot
Match: sp|Q9M0R5|ATL36_ARATH (Putative RING-H2 finger protein ATL36 OS=Arabidopsis thaliana OX=3702 GN=ATL36 PE=3 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 5.7e-38
Identity = 113/288 (39.24%), Postives = 145/288 (50.35%), Query Frame = 0 

Query: 106 RPVRGLDPAFIATFPTFVYSTVKGLKIGKSSLECAVCLNEFENSDRLRLIPKCSHVFHSV 165
           R  RGL+   I +FPTF+YS VKGLKIGK  +ECA+CL+EFE+ + LR +P CSH FH+ 
Sbjct: 90  RARRGLEKEVIESFPTFLYSEVKGLKIGKGGVECAICLSEFEDQETLRWMPPCSHTFHAN 149

Query: 166 CVDAWLVSHSTCPVCRANLCPKPGDGTLSMINFDPAAGSERTGSVPXXXXXXXXXXVSIP 225
           C+D WL S STCPVCRANL  KPG+ +   +N D   G  +                   
Sbjct: 150 CIDVWLSSWSTCPVCRANLSLKPGE-SYPYLNMDVETGGVQ------------------- 209

Query: 226 VVDDLRAGEEATVQANVTNPSPVPTRSTPTRSRSLG----WRLSGIF-QRSNSTGH---- 285
                           + N   +   S  TRSRS G    WR++ IF  RS+STGH    
Sbjct: 210 ---------------KLPNERSLTGNSVTTRSRSTGLLSSWRMAEIFVPRSHSTGHSLVQ 269

Query: 286 ------DRFTLRLPDAVRSQLMNSTLNRTRSWAELPREQSLRRGYRGGI--GENGRW--- 345
                 DRFTL+LP+ V+ QL++  L R RS   LP+  S R+GYR G    E G +   
Sbjct: 270 QLGENLDRFTLQLPEEVQRQLVSLNLIR-RSHIVLPQAVSSRQGYRSGSVGSERGGFSQG 329

Query: 346 ----RNFLQRTFSVPAQI--VGRVAGTGRSPVHEDR--GERSFARLTP 366
               R  L  +FS   Q   V  +         +D+  GERSF RL P
Sbjct: 330 RQTHRRALSMSFSFSFQTASVRSIHDMNDQAQAKDKYFGERSFERLMP 341

[Close]
BLAST of Carg02992 vs. Swiss-Prot
Match: sp|Q8RXX9|ATL6_ARATH (E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana OX=3702 GN=ATL6 PE=1 SV=2)

HSP 1 Score: 157.5 bits (397), Expect = 2.8e-37
Identity = 108/288 (37.50%), Postives = 136/288 (47.22%), Query Frame = 0 

Query: 48  ISKNMAIAFVALISAFFVLGIVSVYTRRCRERRFGRXXXXXXXXXXXXXXXXXXXMPWRP 107
           +S  MA+  V LI+A F +G  S+Y R C                               
Sbjct: 45  LSPAMAVIVVILIAALFFMGFFSIYFRHC--------SGVPDAGVSPAGGARSRATVNAA 104

Query: 108 VRGLDPAFIATFPTFVYSTVKGLKIGKSSLECAVCLNEFENSDRLRLIPKCSHVFHSVCV 167
            RGLD + + TFPTF+YS VK  K+GK  LECA+CLNEFE+ + LRL+PKC HVFH  C+
Sbjct: 105 ARGLDVSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCI 164

Query: 168 DAWLVSHSTCPVCRANLCPKPGDGTLSMINFDPAAGSERTGSVPXXXXXXXXXXVSIPVV 227
           DAWL +H TCPVCRANL  +  +G             E  G+ P                
Sbjct: 165 DAWLEAHVTCPVCRANLAEQVAEG----------ESVEPGGTEP---------------- 224

Query: 228 DDLRAGEEATVQANVTNPSPVPTRSTPTR---SRSLGWRLSGI--------FQRSNSTGH 287
                  +  +Q  V NP PV T   P +   S     RL G+        F RS++TGH
Sbjct: 225 -------DLELQQVVVNPEPVVTAPVPEQLVTSEVDSRRLPGVPVDLKRVKFSRSHTTGH 284

Query: 288 ---------DRFTLRLPDAVRSQLMNS-TLNRTRSWAELPREQSLRRG 315
                    +RFTLRLP+ VR ++M    LNRT S   LPR  S RRG
Sbjct: 285 SVVQPGECTERFTLRLPEDVRKRIMKDWKLNRTNSLLVLPRGGSSRRG 291

[Close]
BLAST of Carg02992 vs. Swiss-Prot
Match: sp|O64763|ATL9_ARATH (E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana OX=3702 GN=ATL9 PE=1 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 3.1e-36
Identity = 115/290 (39.66%), Postives = 144/290 (49.66%), Query Frame = 0 

Query: 109 RGLDPAFIATFPTFVYSTVKGLKIGKSSLECAVCLNEFENSDRLRLIPKCSHVFHSVCVD 168
           RGLD   I TFPTF+YS VK ++IGK  +ECAVCL EFE+ + LRL+P C HVFH+ CVD
Sbjct: 105 RGLDAEAIETFPTFLYSEVKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHADCVD 164

Query: 169 AWLVSHSTCPVCRANLC----PKPGDGTLSMINFDPAAGSERTGSVPXXXXXXXXXXVSI 228
            WL  HSTCP+CRA+L         D T S    DP   S  T                 
Sbjct: 165 VWLSEHSTCPLCRADLVLNQQGDDDDSTESYSGTDPGTISSSTDPERGMV---------- 224

Query: 229 PVVDDLRAGEEATVQANVTNPSPVPTRSTPTRSRSLGWRLSGI-FQRSNSTGH------- 288
                L + +   + A   + S +  RS  T   S  W+++GI F RS+STGH       
Sbjct: 225 -----LESSDAHLLDAVTWSNSNITPRSKSTGLSS--WQITGILFPRSHSTGHSLIQPAG 284

Query: 289 --DRFTLRLPDAVRSQLMNSTLNRTRSW-AELPREQSLRRGYRGG--------------I 348
             DRFTLRLPD VR QLM +  +RT    A LP+ +S R GYR G               
Sbjct: 285 NLDRFTLRLPDDVRRQLMKT--SRTMGHVALLPQARSSRSGYRSGSVGSERSAFPYGRKS 344

Query: 349 GENGRWRNFLQRTFSVPAQIVGRVAGTGRS----PVHEDRGERSFARLTP 366
             N R  + L  +FS  +  V R   +G +    P   + GERSF RL P
Sbjct: 345 NNNNRRLHSLSFSFSFRSGSV-RSTFSGDAPKNLPTSIEAGERSFERLRP 374

[Close]
BLAST of Carg02992 vs. TrEMBL
Match: tr|A0A0A0LE06|A0A0A0LE06_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G889960 PE=4 SV=1)

HSP 1 Score: 487.6 bits (1254), Expect = 2.4e-134
Identity = 295/380 (77.63%), Postives = 315/380 (82.89%), Query Frame = 0 

Query: 1   MIPVMVIRKRNHGVAGRL---XXXXXXXXXXXXXXXETGAGTIPVSSEPEISKNMAIAFV 60
           MI +MVI K+NH +  +    XXXXXXXXXXXXXXX  G GTIPVSSEPE+SK MAIAFV
Sbjct: 1   MITIMVIGKKNHVLTCQFXXXXXXXXXXXXXXXXXXXAGTGTIPVSSEPEVSKTMAIAFV 60

Query: 61  ALISAFFVLGIVSVYTRRCRERRFGRXXXXXXXXXXXXXXXXXXXMPWRPVRGLDPAFIA 120
           ALIS FFVLGIVS+YTRRCRERR G       XXXXXXXXXXXXX+PWRP RGLDPAFIA
Sbjct: 61  ALISGFFVLGIVSIYTRRCRERRMG------GXXXXXXXXXXXXXVPWRPSRGLDPAFIA 120

Query: 121 TFPTFVYSTVKGLKIGKSSLECAVCLNEFENSDRLRLIPKCSHVFHSVCVDAWLVSHSTC 180
           TFPTFVYS VKGLKIGKSSLECAVCLNEFENSD LRLIPKCSHVFHS CVDAWL+SHSTC
Sbjct: 121 TFPTFVYSKVKGLKIGKSSLECAVCLNEFENSDMLRLIPKCSHVFHSGCVDAWLISHSTC 180

Query: 181 PVCRANLCPKPGDGTLSMINFDPAAGSERTG--SVPXXXXXXXXXXVSIPVVDDLRAGEE 240
           PVCRANLCPKPG+ TLS+ NFDP+ GSER G    PXXXXXXXX  V+IPVV+D RA  E
Sbjct: 181 PVCRANLCPKPGEVTLSIFNFDPSTGSERIGLEQSPXXXXXXXXNHVTIPVVEDRRAATE 240

Query: 241 ATVQANVTNPSPVPTRSTPTRSRSLGWRLSGIFQRSNSTGHDRFTLRLPDAVRSQLMNST 300
            T   NVTNPSPV   STPTRSRSLGWRLS IFQRSNSTGH+RFTLRLP+AVRSQL+NST
Sbjct: 241 TT---NVTNPSPVANWSTPTRSRSLGWRLSEIFQRSNSTGHERFTLRLPEAVRSQLLNST 300

Query: 301 LNRTRSWAELPREQSLRRGYRGGIGENGRWRNFLQRTFSVPAQIVGRVAGTGRSPVHEDR 360
           LNRTRS AELPR QS RRGYRGG GE+G WR FLQR FS+PA +VGR A  GR PV ED 
Sbjct: 301 LNRTRSLAELPRVQSSRRGYRGGTGESGGWRKFLQRNFSLPAPLVGRTADNGRYPVDEDL 360

Query: 361 GERSFARLTPSGIGPSTVAD 376
           GERSFARLT  G GPST A+
Sbjct: 361 GERSFARLTSRGNGPSTAAE 371

[Close]
BLAST of Carg02992 vs. TrEMBL
Match: tr|A0A1S3CQM2|A0A1S3CQM2_CUCME (E3 ubiquitin-protein ligase ATL15-like OS=Cucumis melo OX=3656 GN=LOC103503678 PE=4 SV=1)

HSP 1 Score: 448.0 bits (1151), Expect = 2.1e-122
Identity = 257/326 (78.83%), Postives = 273/326 (83.74%), Query Frame = 0 

Query: 52  MAIAFVALISAFFVLGIVSVYTRRCRERRFGRXXXXXXXXXXXXXXXXXXXMPWRPVRGL 111
           MAIAFVALIS FFVLG+VS+YTRRCRERR        XXXXXXXXXXXXXX+PWRP RGL
Sbjct: 1   MAIAFVALISGFFVLGMVSIYTRRCRERRLA------XXXXXXXXXXXXXXVPWRPSRGL 60

Query: 112 DPAFIATFPTFVYSTVKGLKIGKSSLECAVCLNEFENSDRLRLIPKCSHVFHSVCVDAWL 171
           DPAFIATFPTFVYS VKGLKIGKSSLECAVCLNEFENSD LRLIP+CSHVFHS CVDAWL
Sbjct: 61  DPAFIATFPTFVYSKVKGLKIGKSSLECAVCLNEFENSDMLRLIPECSHVFHSGCVDAWL 120

Query: 172 VSHSTCPVCRANLCPKPGDGTLSMINFDPAAGSERTG--SVPXXXXXXXXXXVSIPVVDD 231
           +SHSTCPVCRANLCPKPG+ TLS+ N DP+ GSER G    P XXXXXXX  V+IPVV+D
Sbjct: 121 ISHSTCPVCRANLCPKPGEVTLSIFNSDPSTGSERIGVERSPTXXXXXXXNHVTIPVVED 180

Query: 232 LRAGEEATVQANVTNPSPVPTRSTPTRSRSLGWRLSGIFQRSNSTGHDRFTLRLPDAVRS 291
            RA  E T   NVTNPSPV  RSTPTRSRSLG RLS IFQRSNSTGH+RFTLRLP+AVRS
Sbjct: 181 RRAATETT---NVTNPSPVANRSTPTRSRSLGRRLSEIFQRSNSTGHERFTLRLPEAVRS 240

Query: 292 QLMNSTLNRTRSWAELPREQSLRRGYRGGIGENGRWRNFLQRTFSVPAQIVGRVAGTGRS 351
           QLMNSTLNRTRS AELPR +S RRG+RGG GENG WRNFLQRTFSVPA +VGR A TGR 
Sbjct: 241 QLMNSTLNRTRSLAELPRVRSSRRGFRGGTGENGGWRNFLQRTFSVPAPVVGRTADTGRH 300

Query: 352 PVHEDRGERSFARLTPSGIGPSTVAD 376
           PV ED GERSFARLT     PST A+
Sbjct: 301 PVDEDLGERSFARLTSRENCPSTAAE 317

[Close]
BLAST of Carg02992 vs. TrEMBL
Match: tr|A0A0A0LNW5|A0A0A0LNW5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G369210 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 3.7e-66
Identity = 158/341 (46.33%), Postives = 193/341 (56.60%), Query Frame = 0 

Query: 48  ISKNMAIAFVALISAFFVLGIVSVYTRRCRERRFGRXXXXXXXXXXXXXXXXXXXMPWRP 107
           ISK MA+  + L+  F V+ ++SVYTR+C E+RFG                       R 
Sbjct: 42  ISKRMAVVLIVLVCFFIVVAVLSVYTRQCTEQRFGGRLLLPAPLDGTNARSR------RA 101

Query: 108 VRGLDPAFIATFPTFVYSTVKGLKIGKSSLECAVCLNEFENSDRLRLIPKCSHVFHSVCV 167
            RGLD A IATFPTFVYS VK LKIGK SLECA+CL+EF + D LRL+PKCSHVFHS C+
Sbjct: 102 ARGLDAAVIATFPTFVYSNVKDLKIGKGSLECAICLSEFGDDDTLRLLPKCSHVFHSDCI 161

Query: 168 DAWLVSHSTCPVCRANLCPKPGD-GTLSMINFDPAA-GSERTGSVPXXXXXXXXXXVSIP 227
           DAWLVSHSTCPVCRA+L PKPGD    +++N D    G+ R               V IP
Sbjct: 162 DAWLVSHSTCPVCRASLVPKPGDISFAALLNSDSGIDGNGRDEGNRGTGSENNQVVVQIP 221

Query: 228 VVDDLRAGEEATVQANVTNPSPVPTRSTPTRSRSLGWRLSGIFQRSNSTGH--------- 287
                   E      N+  P+    +S   RSRS GWRLSG+F RS+STGH         
Sbjct: 222 -------EENQGQDVNLITPNQGLNQSRSIRSRSSGWRLSGLFPRSHSTGHSLVQRGMDY 281

Query: 288 DRFTLRLPDAVRSQLMNSTLNRTRSWAELPREQSLRRGYRGGIGENGRWRNFLQ------ 347
           +R+TLRLP+ VRS+L+NS LNR RS     R QS R+GYR  +G+NG   N  +      
Sbjct: 282 ERYTLRLPEEVRSELLNSNLNRARSCVAFQRMQSSRQGYRNELGKNGSVGNRSRSGRPEW 341

Query: 348 RTFSVPAQIVGRVAGTGRSPVHEDRGERSFARLTPSGIGPS 372
           RT    A ++ R     R  V+ D G R FARL P G G S
Sbjct: 342 RTLLAAAPLLKREG--SRKGVNGDEGGRPFARLRPDGDGQS 367

[Close]
BLAST of Carg02992 vs. TrEMBL
Match: tr|A0A1S3BBD9|A0A1S3BBD9_CUCME (RING-H2 finger protein ATL11-like OS=Cucumis melo OX=3656 GN=LOC103488088 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 1.7e-63
Identity = 154/345 (44.64%), Postives = 194/345 (56.23%), Query Frame = 0 

Query: 48  ISKNMAIAFVALISAFFVLGIVSVYTRRCRERRFGRXXXXXXXXXXXXXXXXXXXMPWRP 107
           ISK MA+  + L+  F V+ ++SVYTR+C E+RFG                       R 
Sbjct: 42  ISKRMAVVLIVLVCFFIVVAVLSVYTRQCTEQRFGGRLLLPTHLDGANARSR------RA 101

Query: 108 VRGLDPAFIATFPTFVYSTVKGLKIGKSSLECAVCLNEFENSDRLRLIPKCSHVFHSVCV 167
            RGLD A IATFPTFVYS VK LKIGK SLECA+CL+EF + D LRL+PKCSHVFHS C+
Sbjct: 102 ARGLDAAVIATFPTFVYSNVKDLKIGKGSLECAICLSEFGDDDTLRLLPKCSHVFHSDCI 161

Query: 168 DAWLVSHSTCPVCRANLCPKPGD-GTLSMINFDPAAGSERTGSVPXXXXXXXXXXVSIPV 227
           DAWLVSHSTCPVCRA+L PKPGD    +++N D  +G +  G               I  
Sbjct: 162 DAWLVSHSTCPVCRASLVPKPGDISFAALLNSD--SGIDGNGRDEGNRGTGAENNQVIVR 221

Query: 228 VDDLRAGEEATVQANVTNPSPVPTRSTPTRSRSLGWRLSGIFQRSNSTGH---------D 287
           + +   G++     N+  P+    +S   RSRS GWRLSG+F RS+STGH         +
Sbjct: 222 IPEENQGQD----VNLITPNQGLNQSRSIRSRSSGWRLSGLFPRSHSTGHSLVQRGVDYE 281

Query: 288 RFTLRLPDAVRSQLMNSTLNRTRSWAELPREQSLRRGYRGGIGENG-----------RWR 347
           R+TLRLP+ VRS+L+NS LNR RS     R QS R+GYR  +G+NG            WR
Sbjct: 282 RYTLRLPEEVRSELLNSNLNRARSCVAFQRMQSSRQGYRNELGKNGLVGNRSRSGRSEWR 341

Query: 348 NFLQRTFSVPAQIVGRVAGTGRSPVHEDRGERSFARLTPSGIGPS 372
             L      P   + +  G+ R  V+ D G R FARL     G S
Sbjct: 342 TLL------PGAPLFKREGS-RKDVNGDDGGRPFARLRADCDGQS 367

[Close]
BLAST of Carg02992 vs. TrEMBL
Match: tr|A0A2I4E960|A0A2I4E960_9ROSI (RING-H2 finger protein ATL11-like OS=Juglans regia OX=51240 GN=LOC108987460 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 4.0e-60
Identity = 155/362 (42.82%), Postives = 196/362 (54.14%), Query Frame = 0 

Query: 38  GTIPVSSEP----EISKNMAIAFVALISAFFVLGIVSVYTRRCRERRF-GRXXXXXXXXX 97
           GT+P   +P    +  K MA+  V L++ FFVLG +SVY R+C + R  GR         
Sbjct: 49  GTVPGPQDPLAGLKFDKRMALIMVILVAVFFVLGFLSVYVRQCTDYRIRGRLDHSIPVGG 108

Query: 98  XXXXXXXXXXMPWRPVRGLDPAFIATFPTFVYSTVKGLKIGKSSLECAVCLNEFENSDRL 157
                        R  RG+D + I TFPTFVYSTVKGLKIGK SLECAVCLNEFE+ + L
Sbjct: 109 NDRRS--------RMARGVDSSTINTFPTFVYSTVKGLKIGKGSLECAVCLNEFEDDETL 168

Query: 158 RLIPKCSHVFHSVCVDAWLVSHSTCPVCRANLCPKPGDGTLSMINFDPAAGSERTGSVPX 217
           RL+PKCSHVFH+ C+DAWL SHSTCPVCRANL  KPG+  +  +   P   ++     P 
Sbjct: 169 RLLPKCSHVFHTDCIDAWLASHSTCPVCRANLILKPGE--IPSVMHIPDLDND-----PV 228

Query: 218 XXXXXXXXXVSIPVVDDLRAGEEATVQANVTNPSPVPTRSTPTRSRSLGWRLSGIFQRSN 277
                     +   + D    E      N+ N +    ++ P RSRS G+R++GIF RS+
Sbjct: 229 EPDRLPDTDETQSRIADNHIIESDAPNVNLVNHAQGTNQNRPPRSRSSGFRITGIFPRSH 288

Query: 278 STGH---------DRFTLRLPDAVRSQLMNSTLNRTRSWAELPREQSLRRGYR------- 337
           STGH         +RFTLRLP+ VRS+L+NSTLNRT S    PR +S RRGYR       
Sbjct: 289 STGHSLVQPGENCERFTLRLPEDVRSRLINSTLNRTSSSTAFPRVRSSRRGYRSASVGTG 348

Query: 338 GG--------IGENGRW-----RNFLQRTFSVPAQIVGRVAGTGRSPVHEDRGERSFARL 366
           GG        +  +GRW     R+FL RT S  +Q              +D GE S  RL
Sbjct: 349 GGRNYMFQEQVNRSGRWRFPLTRSFLSRTGSARSQ----------KAAMDDVGESSSERL 385

The following BLAST results are available for this feature:
BLAST of Carg02992 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022937389.18.9e-18193.87RING-H2 finger protein ATL11-like [Cucurbita moschata][more]
XP_022975950.14.6e-17797.07RING-H2 finger protein ATL11-like [Cucurbita maxima][more]
XP_023536280.13.3e-17594.93RING-H2 finger protein ATL11-like [Cucurbita pepo subsp. pepo][more]
XP_004136427.23.7e-13477.63PREDICTED: RING-H2 finger protein ATL11-like [Cucumis sativus] >KGN60240.1 hypot... [more]
XP_008466188.23.2e-12278.83PREDICTED: E3 ubiquitin-protein ligase ATL15-like [Cucumis melo][more]
BLAST of Carg02992 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G72200.12.6e-4940.47RING/U-box superfamily protein[more]
AT1G22500.11.0e-4538.30RING/U-box superfamily protein[more]
AT4G09120.13.2e-3939.24RING/U-box superfamily protein[more]
AT3G05200.11.6e-3837.50RING/U-box superfamily protein[more]
AT2G35000.11.7e-3739.66RING/U-box superfamily protein[more]
BLAST of Carg02992 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q84W40|ATL11_ARATH4.7e-4840.47RING-H2 finger protein ATL11 OS=Arabidopsis thaliana OX=3702 GN=ATL11 PE=2 SV=2[more]
sp|Q9SK92|ATL15_ARATH1.8e-4438.30E3 ubiquitin-protein ligase ATL15 OS=Arabidopsis thaliana OX=3702 GN=ATL15 PE=1 ... [more]
sp|Q9M0R5|ATL36_ARATH5.7e-3839.24Putative RING-H2 finger protein ATL36 OS=Arabidopsis thaliana OX=3702 GN=ATL36 P... [more]
sp|Q8RXX9|ATL6_ARATH2.8e-3737.50E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana OX=3702 GN=ATL6 PE=1 SV... [more]
sp|O64763|ATL9_ARATH3.1e-3639.66E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana OX=3702 GN=ATL9 PE=1 SV... [more]
BLAST of Carg02992 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LE06|A0A0A0LE06_CUCSA2.4e-13477.63Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G889960 PE=4 SV=1[more]
tr|A0A1S3CQM2|A0A1S3CQM2_CUCME2.1e-12278.83E3 ubiquitin-protein ligase ATL15-like OS=Cucumis melo OX=3656 GN=LOC103503678 P... [more]
tr|A0A0A0LNW5|A0A0A0LNW5_CUCSA3.7e-6646.33Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G369210 PE=4 SV=1[more]
tr|A0A1S3BBD9|A0A1S3BBD9_CUCME1.7e-6344.64RING-H2 finger protein ATL11-like OS=Cucumis melo OX=3656 GN=LOC103488088 PE=4 S... [more]
tr|A0A2I4E960|A0A2I4E960_9ROSI4.0e-6042.82RING-H2 finger protein ATL11-like OS=Juglans regia OX=51240 GN=LOC108987460 PE=4... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg02992-RACarg02992-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 139..180
e-value: 1.6E-6
score: 37.7
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 138..181
e-value: 8.6E-14
score: 51.5
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 139..181
score: 12.637
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 114..186
e-value: 3.9E-19
score: 69.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 345..375
NoneNo IPR availablePANTHERPTHR14155:SF414E3 UBIQUITIN-PROTEIN LIGASE ATL15-RELATEDcoord: 10..283
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 10..283
NoneNo IPR availableCDDcd16461RING-H2_EL5_likecoord: 138..181
e-value: 2.46812E-18
score: 76.9651
NoneNo IPR availableSUPERFAMILYSSF57850RING/U-boxcoord: 134..188

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg02992Cla022120Watermelon (97103) v1carwmB0627
Carg02992Cla014123Watermelon (97103) v1carwmB0633
Carg02992Cla023038Watermelon (97103) v1carwmB0634
Carg02992Csa2G369210Cucumber (Chinese Long) v2carcuB0652
Carg02992Csa6G499190Cucumber (Chinese Long) v2carcuB0659
Carg02992Csa3G889960Cucumber (Chinese Long) v2carcuB0655
Carg02992MELO3C007732Melon (DHL92) v3.5.1carmeB0636
Carg02992MELO3C011053Melon (DHL92) v3.5.1carmeB0630
Carg02992MELO3C003544Melon (DHL92) v3.5.1carmeB0631
Carg02992ClCG11G014380Watermelon (Charleston Gray)carwcgB0610
Carg02992CSPI03G45330Wild cucumber (PI 183967)carcpiB0665
Carg02992CSPI02G21290Wild cucumber (PI 183967)carcpiB0662
Carg02992Cucsa.104160Cucumber (Gy14) v1carcgyB0706
Carg02992Cucsa.311740Cucumber (Gy14) v1carcgyB0712
Carg02992Cucsa.160260Cucumber (Gy14) v1carcgyB0707
Carg02992CmaCh05G005160Cucurbita maxima (Rimu)carcmaB0900
Carg02992CmoCh05G005440Cucurbita moschata (Rifu)carcmoB0877
Carg02992CmoCh09G005650Cucurbita moschata (Rifu)carcmoB0865
Carg02992Lsi01G007960Bottle gourd (USVL1VR-Ls)carlsiB574
Carg02992Lsi04G022610Bottle gourd (USVL1VR-Ls)carlsiB575
Carg02992Lsi08G009910Bottle gourd (USVL1VR-Ls)carlsiB579
Carg02992Cp4.1LG11g04420Cucurbita pepo (Zucchini)carcpeB0894
Carg02992Cp4.1LG06g04190Cucurbita pepo (Zucchini)carcpeB0906
Carg02992CsGy2G021010Cucumber (Gy14) v2carcgybB0629
Carg02992CsGy3G042810Cucumber (Gy14) v2carcgybB0632
Carg02992MELO3C003544.2Melon (DHL92) v3.6.1carmedB0640
Carg02992MELO3C007732.2Melon (DHL92) v3.6.1carmedB0645
Carg02992MELO3C011053.2Melon (DHL92) v3.6.1carmedB0639
Carg02992CsaV3_6G045190Cucumber (Chinese Long) v3carcucB0670
Carg02992CsaV3_3G047780Cucumber (Chinese Long) v3carcucB0666
Carg02992CsaV3_2G029950Cucumber (Chinese Long) v3carcucB0663
Carg02992Cla97C01G017910Watermelon (97103) v2carwmbB0655
Carg02992Cla97C11G220380Watermelon (97103) v2carwmbB0656
Carg02992Cla97C08G154360Watermelon (97103) v2carwmbB0664
Carg02992Bhi04G000654Wax gourdcarwgoB0749
Carg02992Bhi09G002095Wax gourdcarwgoB0752
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg02992Carg08209Silver-seed gourdcarcarB066
The following block(s) are covering this gene:
GeneOrganismBlock
Carg02992Wax gourdcarwgoB0751
Carg02992Silver-seed gourdcarcarB424
Carg02992Cucurbita maxima (Rimu)carcmaB0889
Carg02992Cucurbita maxima (Rimu)carcmaB0892
Carg02992Cucurbita maxima (Rimu)carcmaB0894
Carg02992Cucurbita moschata (Rifu)carcmoB0868
Carg02992Cucurbita moschata (Rifu)carcmoB0870
Carg02992Cucurbita pepo (Zucchini)carcpeB0902
Carg02992Cucurbita pepo (Zucchini)carcpeB0907
Carg02992Watermelon (Charleston Gray)carwcgB0617