Carg02946 (gene) Silver-seed gourd

NameCarg02946
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_008 : 936114 .. 936770 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATCAATTCCCTAGTTCGATTTCAGAGTCGGGACCCGGGCGAATGCGTTTATCGCAGGTTCGCTTGAAGCCCTAAGGATCCATTTCGAAGACCGGAAATTACAGCGGCGACCGGCGCCGAGCTCGTCGGAGTCGTCGTGGAATCGCAAGAACGAAGAAAGAGTGCAAAGCAGCTTGGAGGCTTGTGTGAAAGACGACGCTGGTTAGTGTAGATATGTTCTGGCACTAAACAATTTTTTTTTTTTTTCTTTTTCTGTTATGGACGAATTTCCGTTATGTAGCTGAGATTTTGATGAAAAAGATACAGAGAAATTATAGGATTTTTGTTCGCAATGTTCTGTAAATGATGTGCGAAAGTACTGCAAGCTAAGCGGTTTGTGTATGCTTGTTTTTGAGGATTTTACTTTTGAACTCTCAGGTGTAAGTCAAATGTAGTTTGTTAATACTTGCTTTCAATTTGGAGTTGTTTGATGATAAGAAATGGGGATGGGACGAAATTATAGCTTTTGATTGTTTGGAGGATGATTAATGATCTGTTTCTTTGCGAAATTTTAGCTTTTGATTGCTTGGAGGATGATTAATTATCTGTTTCTTTGCGAAATTTGTGCCTGCAGACTGAAGATTTTGTGGAGATTGTTATCCAGCTGATAACTGA

mRNA sequence

ATGCATCAATTCCCTAGTTCGATTTCAGAGTCGGGACCCGGGCGAATGCGTTCGCTTGAAGCCCTAAGGATCCATTTCGAAGACCGGAAATTACAGCGGCGACCGGCGCCGAGCTCGTCGGAGTCGTCGTGGAATCGCAAGAACGAAGAAAGAGTGCAAAGCAGCTTGGAGGCTTGTGTGAAAGACGACGCTGCTGATAACTGA

Coding sequence (CDS)

ATGCATCAATTCCCTAGTTCGATTTCAGAGTCGGGACCCGGGCGAATGCGTTCGCTTGAAGCCCTAAGGATCCATTTCGAAGACCGGAAATTACAGCGGCGACCGGCGCCGAGCTCGTCGGAGTCGTCGTGGAATCGCAAGAACGAAGAAAGAGTGCAAAGCAGCTTGGAGGCTTGTGTGAAAGACGACGCTGCTGATAACTGA

Protein sequence

MHQFPSSISESGPGRMRSLEALRIHFEDRKLQRRPAPSSSESSWNRKNEERVQSSLEACVKDDAADN
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg02946-RACarg02946-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..67
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 20..35
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..67

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg02946CmaCh09G005360Cucurbita maxima (Rimu)carcmaB0889
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg02946Wax gourdcarwgoB0748
Carg02946Wax gourdcarwgoB0752
Carg02946Silver-seed gourdcarcarB067
Carg02946Silver-seed gourdcarcarB511
Carg02946Silver-seed gourdcarcarB558
Carg02946Cucumber (Gy14) v2carcgybB0630
Carg02946Cucumber (Gy14) v2carcgybB0632
Carg02946Cucumber (Gy14) v1carcgyB0708
Carg02946Cucumber (Gy14) v1carcgyB0712
Carg02946Cucurbita maxima (Rimu)carcmaB0893
Carg02946Cucurbita maxima (Rimu)carcmaB0894
Carg02946Cucurbita maxima (Rimu)carcmaB0902
Carg02946Cucurbita moschata (Rifu)carcmoB0865
Carg02946Cucurbita moschata (Rifu)carcmoB0869
Carg02946Cucurbita moschata (Rifu)carcmoB0870
Carg02946Cucurbita moschata (Rifu)carcmoB0879
Carg02946Cucurbita pepo (Zucchini)carcpeB0896
Carg02946Cucurbita pepo (Zucchini)carcpeB0902
Carg02946Cucurbita pepo (Zucchini)carcpeB0906
Carg02946Cucurbita pepo (Zucchini)carcpeB0908
Carg02946Wild cucumber (PI 183967)carcpiB0664
Carg02946Wild cucumber (PI 183967)carcpiB0665
Carg02946Cucumber (Chinese Long) v2carcuB0653
Carg02946Cucumber (Chinese Long) v2carcuB0655
Carg02946Cucumber (Chinese Long) v3carcucB0664
Carg02946Cucumber (Chinese Long) v3carcucB0666
Carg02946Bottle gourd (USVL1VR-Ls)carlsiB575
Carg02946Bottle gourd (USVL1VR-Ls)carlsiB581
Carg02946Melon (DHL92) v3.5.1carmeB0628
Carg02946Melon (DHL92) v3.5.1carmeB0631
Carg02946Melon (DHL92) v3.6.1carmedB0638
Carg02946Melon (DHL92) v3.6.1carmedB0640
Carg02946Watermelon (Charleston Gray)carwcgB0619
Carg02946Watermelon (Charleston Gray)carwcgB0615
Carg02946Watermelon (97103) v1carwmB0632
Carg02946Watermelon (97103) v1carwmB0628
Carg02946Watermelon (97103) v2carwmbB0661
Carg02946Watermelon (97103) v2carwmbB0666