Carg02800 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGTTGGCATCTCAGATAGGGCTTACCAGTCAGATGCTAGAGCAGACATGAAGGTTTGATTTTCATTCTTTTCTTTGATGTTATTTCGAGAGATCCAAAAGAATAATGATGACAGAGAGAGAAAAGGAATGTCCTAAGAACTAGACTGAATAAAGATTGTTATATTATTATTTTTCATTAGGGGAGATGATTGTTTTGTTTTTGGTTCTCTTCGCACGAGCTTTAAGGACACCTGAATGAATAAGTTAAGAAAATTGTCTAAAATACTAAATTATAGGCACTCAATGTGTTGTCTTGTCAGTAATCCAGAATTATACTTTAGTCTGCCATCATTGCAACAATATATGTGTATATGTATATATTTATTTTTTTAAAGCATTTACGTGGACTCTGATTAGTTACCTTAAATTCTTTGTCATTTCTACCCATCTAACAGGCTTTAAACAGATGGGGATATTATCCGCTCATCCTCATAGGGTCATGGGCTTTTGGTACAATCAACCGCATTCATGATTTTATTGAGCCAGGTCATAAAATCTTCTGGCTGTCAGTTCTTGATGTTGGGATGGCTTCACTAATGGTAACCAATTTTTTCATTCTTGAAAATAGTGTTTAATTGAGTATATGATTCTGAATGCTCGGTGGGGTTTTAAGGAGGTTTTGAGATGTCGTTGACGTAAAAAGATAGCAAAGGTTTTGTCATTATTGGTTTTATTAATAACTCAAAAACCAATAATGATGAAAGGATGATTCATAAGTAGCTCTCGTTTAACTTCCACAAATTTATGAGATATGATTAGATTTTGGTTGGTAATATTAACAAGCTAGTTGTGACTGGCTATTTGCTGTAGGGCTTGTTCAATTCAATAGCATATGGTCTGAATTCTTCTGTACGGCGGGCAATTTATGAAAGATTAGACTTGTAAGTAAACCTGCTCCTTATAACTTCTCTTTAAATTGGACATCCAAATGTTTGTATATTTTCTCTGCTTCATTTGTATTTATCCATCGCTATAGTTGTAGTAAATTATCATCATGGAATTCTACTAGGTATAGGATTGTCAATACCCCCTTCTGCTCTTCAGGAAAAATGAATGACGTTAATGACCCTTCACTATAAAACTAATGTGCCGCTATCTTTTAATGCTATTTTTTCTTAAATGCTGTTGACCATCTCGTTGCAGAGCTTTTTATTAAGGGATTTTAACTTTTAGTACAGAAATAAAATTTGTATTTAATAACAGAGTAATTTGGGGCCAAGATGAAAAATGTCTGAATTATCACTTCAATACTTTGGCAATGGATAGTGATAGTAGCTGAAGTCATGGTTAGTAAACTCTATCGAGTATCTGAAAGTACTTCATCATGTAGTTACTGTCACGGGACTTTGGCCTTCAGTGACGGATAAGTTGAAACAAGTGAATTGAGAATATTTTGCTCATGCAACTTCCTTAGTCTTGAGTCCCTGATACGATGTGTATGGGCCCAAGGTAAAGGGGGAAAAAGCTTTCTTGGTCCATTTGGTCTCAAATAAGATTACTTGTTTTTGCATATTTTAACCAGGTTTTGGCCTGAGAAGCTTCGAAGATGGCTCCCCAACAATTCAAGGTTCCGGAATCAAGAACAAGAAGGTGAACTGGTTTCCTTGAGAAGTCTAGATCAGCCATAG ATGGCAGTTGGCATCTCAGATAGGGCTTACCAGTCAGATGCTAGAGCAGACATGAAGGCTTTAAACAGATGGGGATATTATCCGCTCATCCTCATAGGGTCATGGGCTTTTGGTACAATCAACCGCATTCATGATTTTATTGAGCCAGGTCATAAAATCTTCTGGCTGTCAGTTCTTGATGTTGGGATGGCTTCACTAATGGGCTTGTTCAATTCAATAGCATATGGTCTGAATTCTTCTGTACGGCGGGCAATTTATGAAAGATTAGACTTGTTTTGGCCTGAGAAGCTTCGAAGATGGCTCCCCAACAATTCAAGGTTCCGGAATCAAGAACAAGAAGGTGAACTGGTTTCCTTGAGAAGTCTAGATCAGCCATAG ATGGCAGTTGGCATCTCAGATAGGGCTTACCAGTCAGATGCTAGAGCAGACATGAAGGCTTTAAACAGATGGGGATATTATCCGCTCATCCTCATAGGGTCATGGGCTTTTGGTACAATCAACCGCATTCATGATTTTATTGAGCCAGGTCATAAAATCTTCTGGCTGTCAGTTCTTGATGTTGGGATGGCTTCACTAATGGGCTTGTTCAATTCAATAGCATATGGTCTGAATTCTTCTGTACGGCGGGCAATTTATGAAAGATTAGACTTGTTTTGGCCTGAGAAGCTTCGAAGATGGCTCCCCAACAATTCAAGGTTCCGGAATCAAGAACAAGAAGGTGAACTGGTTTCCTTGAGAAGTCTAGATCAGCCATAG MAVGISDRAYQSDARADMKALNRWGYYPLILIGSWAFGTINRIHDFIEPGHKIFWLSVLDVGMASLMGLFNSIAYGLNSSVRRAIYERLDLFWPEKLRRWLPNNSRFRNQEQEGELVSLRSLDQP
BLAST of Carg02800 vs. NCBI nr
Match: XP_022936501.1 (G-protein coupled receptor 1 [Cucurbita moschata]) HSP 1 Score: 261.5 bits (667), Expect = 1.4e-66 Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0
BLAST of Carg02800 vs. NCBI nr
Match: XP_023536415.1 (G-protein coupled receptor 1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 260.8 bits (665), Expect = 2.4e-66 Identity = 124/125 (99.20%), Postives = 125/125 (100.00%), Query Frame = 0
BLAST of Carg02800 vs. NCBI nr
Match: XP_022977070.1 (G-protein coupled receptor 1-like [Cucurbita maxima]) HSP 1 Score: 259.6 bits (662), Expect = 5.4e-66 Identity = 124/125 (99.20%), Postives = 125/125 (100.00%), Query Frame = 0
BLAST of Carg02800 vs. NCBI nr
Match: XP_008452795.1 (PREDICTED: G-protein coupled receptor 1 [Cucumis melo]) HSP 1 Score: 246.5 bits (628), Expect = 4.7e-62 Identity = 116/125 (92.80%), Postives = 122/125 (97.60%), Query Frame = 0
BLAST of Carg02800 vs. NCBI nr
Match: XP_004141349.1 (PREDICTED: G-protein coupled receptor 1 [Cucumis sativus] >KGN55386.1 hypothetical protein Csa_4G648570 [Cucumis sativus]) HSP 1 Score: 243.8 bits (621), Expect = 3.1e-61 Identity = 115/124 (92.74%), Postives = 121/124 (97.58%), Query Frame = 0
BLAST of Carg02800 vs. TAIR10
Match: AT1G48270.1 (G-protein-coupled receptor 1) HSP 1 Score: 198.7 bits (504), Expect = 2.1e-51 Identity = 97/131 (74.05%), Postives = 110/131 (83.97%), Query Frame = 0
BLAST of Carg02800 vs. Swiss-Prot
Match: sp|O04714|GCR1_ARATH (G-protein coupled receptor 1 OS=Arabidopsis thaliana OX=3702 GN=GCR1 PE=1 SV=1) HSP 1 Score: 198.7 bits (504), Expect = 3.7e-50 Identity = 97/131 (74.05%), Postives = 110/131 (83.97%), Query Frame = 0
BLAST of Carg02800 vs. TrEMBL
Match: tr|A0A1S3BU46|A0A1S3BU46_CUCME (G-protein coupled receptor 1 OS=Cucumis melo OX=3656 GN=LOC103493710 PE=4 SV=1) HSP 1 Score: 246.5 bits (628), Expect = 3.1e-62 Identity = 116/125 (92.80%), Postives = 122/125 (97.60%), Query Frame = 0
BLAST of Carg02800 vs. TrEMBL
Match: tr|A0A0A0L5G2|A0A0A0L5G2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G648570 PE=4 SV=1) HSP 1 Score: 243.8 bits (621), Expect = 2.0e-61 Identity = 115/124 (92.74%), Postives = 121/124 (97.58%), Query Frame = 0
BLAST of Carg02800 vs. TrEMBL
Match: tr|A0A251RAH6|A0A251RAH6_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G402500 PE=4 SV=1) HSP 1 Score: 231.1 bits (588), Expect = 1.4e-57 Identity = 106/124 (85.48%), Postives = 119/124 (95.97%), Query Frame = 0
BLAST of Carg02800 vs. TrEMBL
Match: tr|A0A2I4HQ73|A0A2I4HQ73_9ROSI (G-protein coupled receptor 1 isoform X1 OS=Juglans regia OX=51240 GN=LOC109020319 PE=4 SV=1) HSP 1 Score: 228.0 bits (580), Expect = 1.2e-56 Identity = 106/124 (85.48%), Postives = 115/124 (92.74%), Query Frame = 0
BLAST of Carg02800 vs. TrEMBL
Match: tr|A0A061EQI4|A0A061EQI4_THECC (G-protein-coupled receptor 1 isoform 2 OS=Theobroma cacao OX=3641 GN=TCM_021504 PE=4 SV=1) HSP 1 Score: 226.9 bits (577), Expect = 2.6e-56 Identity = 103/124 (83.06%), Postives = 116/124 (93.55%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|