Carg02752 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg02752
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	ATP-dependent RNA helicase
Location	Cucurbita_argyrosperma_scaffold_009 : 1658719 .. 1663617 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGGTTAATTTGTTTTATTGATAAATAATGTGCAGAATTTGTTGTACTTTGGAGTGGATTGGCAAGCTTTTTAGTTGCATTCGTGAAAGGGTCTCCGACTATGCGAACTTCCTGGGCAGATTTGGCCGCAAGTCCGGCTGCTGAGAACGTAGCTGCTGGTTCTTCTGCTAACAATTGTAGTGCTGGAACTACTTCAGCACCTGGCCGATCGGCCTATGTTCCACCACATCTTCGGAATCGCCCTGCCTCTTCCGACCCGCCTGCTGCAGCAAATAGTGGGCCTGCTGTGGGAAACGATCGATCTGGTCATGTAGGGTCCCGCTGGCCTGGTCCAAAGAACGATTATAATCGTTCTGGTTATGGTGGTGGCAGTCGTGGAGGTGGATGGGGAAGTAGAGGAGGTGGATGGGATCGTGGGAGGGGGGACCGTGAAATGAACCCATTTGAAGATGAGGACGATACGGAGCAAGCATTTGGAGAGCAAGAAAATACTGGTATAAATTTTGATGCTTATGAAGATATTCCTGTGGAAACAAGTGGTGAAAATGTACCACCTCCGGTGAATACATTTGCTGAAATTGACTTGGGTGAAGCACTTAATCACAACATTCGGCGGTGTAAGTATGTAAAACCAACTCCCGTCCAGAGGCATGCTATTCCTATCTCCCTTGCAGGGAGAGACTTGATGGCTTGTGCTCAGACTGGATCCGGAAAGACTGCTGCCTTTTGTTTCCCCATTATCAGTGGCATAATGAAGGGCCAAAGTGTGCAGAGACCAGCTCGAGGTGCACGCACAGTGTACCCACTTGCACTTATTCTCTCCCCAACTAGGGAGCTTTCAATGCAAGTAAGTTTTTAATGAAAAACTTCCATTTTATTTTCCCTTGATTATGTAGTAAGCCAGCAGCTCACTATTACAATTTAGCAGTTTAAGAATGAGTTCTTGTGTTCCAGATACATGAAGAAGCAAGGAAATTCTCTTATCAAACAAGTGTTAGAGTGGTGGTTGCTTATGGGGGTGCACCAATCAACCAACAGGTTTTGTGTTCCTTTACCTCCTCCTCATCATTTTATATATCTTGAAGTATTTGAGCTCAACATATGTGTGTATGTATTATATTGTATCATGTTTGGATAAGAAAAGTCAGCACCAAAACTAATTTTGCCCCAAAGTGTTGTTCTTGTAATTTCTGAAGCTGCGTTTGATACACATTTATATCACAGTATATGTTAGGGGTGAGGGAGTATATGCTACGGCCATGAGAAAAAATGGTTAATTATAATTACTTTGGAATGATTTAAGCATAATCATAAAGGTGAACATTTGTTAGTGTACATTTAAAATGTTGAATGGTCATTGATGAACAATCTTTTCAAGATAACATTGGTTAGATCTTCCTTTGCTGGTACAATCCCCCAACTTCTTGGTTTAGGGATTAAACTGCGATCATGTATTGATGGAAGGTGTAATTCAACTTAAGGCTCCGGAACTTTGTAAAACATACATAATGATAAAATTATCTAATAATTTTCCTTGTCAAAAGTATCCTGAAAATTTTGTAGTGTGCTGTTATTGACGTGTGGGACATTTTCCTTCTATTGTCATAGGGTTCATTTGTGGTGTCATGCATGTTCTATTTTTATGCTGACATGATTCTTCTATGTCATATAATTCTGGGTTTGACATTTCATGAGCCACTCACGTCCTATGCCTTTGCTTGTTTATATTTATTTGGCTATAGCACTATTGATACTTTTTTTTTTCAATAAAAAAATCAGCTACGTGAACTAGAAAGAGGTGTCGATATTCTTGTTGCAACACCGGGAAGATTGGTAGATTTGCTTGAAAGGGCAAAAGTTTCACTGCAGATGATAAGATACTTGGCCCTTGATGAAGCAGATCGCATGTTAGATATGGGATTTGAGCCTCAAATTAGGAAAATAGTAGAGCAAATGGACATGCCTCCACCTGGTGTAAGGCAGACTATGCTGTTCAGTGCGACTTTTCCAAGGGAAATTCAGGTACCTTTTCTGCGCACAAGTCTATGTCCCGATACATTATATTTTTAATAGTATTCCTATTTCTTTTCACCATAAACCAAGTGAAGTGTTTGTATTTACATGGTACCGAACAGGGGAAGCATGTTTGAATCAACGAGCTTCTACAATTCTCCTTCTGACATTAAACTTTTTTTTTATTTTTTTTTATTATTATTTTTTTTTAATGCTCCTTGCACATCTTGGCAATCGTAGTGGCTTTTATTATGTCTTAATTGTTTATCCTCACAAAAGATGTATATCAACACAACCATACTTGTTTTTTGTTTAATCTTTTATCGTGTCTTATATGTTTTTTTTTTTGCAGAGACTAGCCTCTGATTTTCTTTCAAGTTACATATTTCTGGCTGTGGGAAGAGTGGGTTCAAGTACTGATCTAATTGCTCAAAGAGTTGAATTTGTTCATGAATCTGATAAGAGAAGTCATTTATTGGACCTTCTTCATGCTCAAAGGGCTAATGGTGTGCAAGGCAAGGTATGTTTAATATTTCTACATCATTGGGAGGATGCATGGCGATCTTGTTTTTTCGTTTTGGTTTTTAGACAATTATATTTCTTACAAATTTATCTTTCATTGACTTGTGCTTCTATCAACCTCATATTCCTAGGAAAAGATATTGAATTAAATATGCTGTATTTAGATTCTTATATAATTTCTGAATTTGCAGCAATCTCTTACTTTGGTTTTTGTGGAGACAAAGAAGGGAGCTGATGCTCTTGAAAATTGGTTATGTCATAATGGTTTTCCTGCCACTACTATTCATGGTGATAGAACACAACAGGTTAGTACATTAGTGCCAGTCATATTTATTTTGTTGAGCAATTACTGTTGCCCCATCCCCCCAAATCCATGTGTGGTTTCTTTTCCTTTGTTTTTAAAGTAATCCCATTGATATGAACATTAATTCATGGGCAGCTTGAAACTTGTTCGTTTATTCAGGCTGTCACTATGCAGTTCTTTAGTCGACTGATGATTTTTTTGATACAAAATACTAGATGTTTCACTCATTCCTCCCCTCAAATTTATTGTATGCTAGTTACTTGTTTTACACAACAACATCAAGAAGGGAAAAAAAGGGGGGGGGGGGAAATAAAGTTCAAGTAGGAAAGGTTTAATTCCAACTGGGAAAATTACACAGGATTTTTTTTTTCTCGTGGTGTATGCCATTTTAAATTTATTCCTTCTGTGGACATGGTTTGATAAGCCTTCTCCTCACTTAACATTCCTGTGATCAAACAGTAGTTTAATATGGTTTAGATATGCAATTTTGGCTCTAACTTTTGTGTCATTTCAAATTTTCATGTCATCAATCTTTATGTCCACTACCAAGGATATAATTAAAAATTAATACACAAAGGATAAAATTTAAATTTAGCCAAGTCTTGTGTAAAAAGGAACTTACTAAGTTCTCCCTATTATTTAGATAAAATCTAAGTAATTGAAGATCTTGAAGACACGGTAGTGGGATAAAAACATTTCCATATGTATGGATGTTACTTGTGAGTTTGATTCTGTTGATTGATTTACTATTCCGTATGTTACACTTTCTTGCCCTGTTGTTGCTTTCCTCTTTTTGTCGATCATTTCATTATTCTCAGCATTATTCAGATCTTAAGGTGGCTTCTGAGTTTTAGATTCCTGCTAAATTTAGTAAAGTGTGAGTAGTTTGTCATCACTGGCAATGGAATGGTGCACACGAGACTTCTCTCCTCTGAAGGTTTTGTATTATTCTTAAAATTTGTATGAAAATTTTCATTGGAACTCTGGAAGATGCAAGAAGGGCCACCAGCCTTATACTGGAGTGTTCAATCTTGCATAACTCGTCTTTGATGTATTGAATCTAGATAGTGAGTTTATAAGCGAACACTGGAGTTGTGATATTTGGGTTACAGCTTCAGATGGATGGTGTTTTAGGTGGTGACAACTGATAGCTCATTTTGATCTTGTTATCTGAGTCTTTTCCCTGCCCTCTAATTTTCTCGTCTGCAGAATAGATTTTACTGTTACCTAGTTCATGCTTCCAAGGGTTGTACTTAATTTTTTTAATTAACTGGGTGCCTGCTTCTGGGCAAGAAATTATTTGAGGGAGCCAAATATTCTTAACTGGTAATGGTTGTTTTATTCATTGGATGCATGAGAGAGATTAAGAATTATGTTTTGACCATGTATTGCTACATTGTCTTTTGTTTGGGTTATATTTAGTTTATTCGCGGTTCTGTTTTATGCATTTATACTCGTTTGCAGGAAAGAGAACACGCATTACGATCCTTTAGAAGTGGGAACACACCAATTTTGGTGGCAACTGATGTAGCTGCCCGTGGGCTTGATATTCCTCATGTTGCACATGTAGTGAACTTTGATCTCCCCAATGACATTGATGATTATGTTCATAGAATTGGACGAACGGGGAGAGCTGGGAAGACTGGTGTAGCAACTGCCTTCTTTAACGAGAACAATTCATCCATAGCAAGGTCCTTGGCTGAACTTATGCAAGAATCCAATCAAGAAGTTCCTGATTGGCTATCACGATTTGCAGCCAGGTCTTCGTACAGTGGAGGTAGAAACCGTCGTTCTGGGGGTGGTCGATTTGTTAGCCGTGACTATCGAAGGGATTCCACTTTCAACAGAGGTGGTTCTGATTATCATAGTGGAGGCAACACCAGCAGTGGTGGGGGTTATGGTGGTGGTGTTCCCGGTGGATATGGAGGAGGATACGGTGGTTCAGGGGTGACTAGTGCATGGGACTAACATGTACGCTTTAAAATTATTTACAGTGTTTAGGTGATGGGTAGAGGAACCCGTTTCTGCCTGAATAGAGTATTGTTTTTTTTTTTTTT

mRNA sequence

ATGAGGGTTAATTTGTTTTATTGATAAATAATGTGCAGAATTTGTTGTACTTTGGAGTGGATTGGCAAGCTTTTTAGTTGCATTCGTGAAAGGGTCTCCGACTATGCGAACTTCCTGGGCAGATTTGGCCGCAAGTCCGGCTGCTGAGAACGTAGCTGCTGGTTCTTCTGCTAACAATTGTAGTGCTGGAACTACTTCAGCACCTGGCCGATCGGCCTATGTTCCACCACATCTTCGGAATCGCCCTGCCTCTTCCGACCCGCCTGCTGCAGCAAATAGTGGGCCTGCTGTGGGAAACGATCGATCTGGTCATGTAGGGTCCCGCTGGCCTGGTCCAAAGAACGATTATAATCGTTCTGGTTATGGTGGTGGCAGTCGTGGAGGTGGATGGGGAAGTAGAGGAGGTGGATGGGATCGTGGGAGGGGGGACCGTGAAATGAACCCATTTGAAGATGAGGACGATACGGAGCAAGCATTTGGAGAGCAAGAAAATACTGGTATAAATTTTGATGCTTATGAAGATATTCCTGTGGAAACAAGTGGTGAAAATGTACCACCTCCGGTGAATACATTTGCTGAAATTGACTTGGGTGAAGCACTTAATCACAACATTCGGCGGTGTAAGTATGTAAAACCAACTCCCGTCCAGAGGCATGCTATTCCTATCTCCCTTGCAGGGAGAGACTTGATGGCTTGTGCTCAGACTGGATCCGGAAAGACTGCTGCCTTTTGTTTCCCCATTATCAGTGGCATAATGAAGGGCCAAAGTGTGCAGAGACCAGCTCGAGGTGCACGCACAGTGTACCCACTTGCACTTATTCTCTCCCCAACTAGGGAGCTTTCAATGCAAATACATGAAGAAGCAAGGAAATTCTCTTATCAAACAAGTGTTAGAGTGGTGGTTGCTTATGGGGGTGCACCAATCAACCAACAGCTACGTGAACTAGAAAGAGGTGTCGATATTCTTGTTGCAACACCGGGAAGATTGGTAGATTTGCTTGAAAGGGCAAAAGTTTCACTGCAGATGATAAGATACTTGGCCCTTGATGAAGCAGATCGCATGTTAGATATGGGATTTGAGCCTCAAATTAGGAAAATAGTAGAGCAAATGGACATGCCTCCACCTGGTGTAAGGCAGACTATGCTGTTCAGTGCGACTTTTCCAAGGGAAATTCAGAGACTAGCCTCTGATTTTCTTTCAAGTTACATATTTCTGGCTGTGGGAAGAGTGGGTTCAAGTACTGATCTAATTGCTCAAAGAGTTGAATTTGTTCATGAATCTGATAAGAGAAGTCATTTATTGGACCTTCTTCATGCTCAAAGGGCTAATGGTGTGCAAGGCAAGCAATCTCTTACTTTGGTTTTTGTGGAGACAAAGAAGGGAGCTGATGCTCTTGAAAATTGGTTATGTCATAATGGTTTTCCTGCCACTACTATTCATGGTGATAGAACACAACAGGAAAGAGAACACGCATTACGATCCTTTAGAAGTGGGAACACACCAATTTTGGTGGCAACTGATGTAGCTGCCCGTGGGCTTGATATTCCTCATGTTGCACATGTAGTGAACTTTGATCTCCCCAATGACATTGATGATTATGTTCATAGAATTGGACGAACGGGGAGAGCTGGGAAGACTGGTGTAGCAACTGCCTTCTTTAACGAGAACAATTCATCCATAGCAAGGTCCTTGGCTGAACTTATGCAAGAATCCAATCAAGAAGTTCCTGATTGGCTATCACGATTTGCAGCCAGGTCTTCGTACAGTGGAGGTAGAAACCGTCGTTCTGGGGGTGGTCGATTTGTTAGCCGTGACTATCGAAGGGATTCCACTTTCAACAGAGGTGGTTCTGATTATCATAGTGGAGGCAACACCAGCAGTGGTGGGGGTTATGGTGGTGGTGTTCCCGGTGGATATGGAGGAGGATACGGTGGTTCAGGGGTGACTAGTGCATGGGACTAACATGTACGCTTTAAAATTATTTACAGTGTTTAGGTGATGGGTAGAGGAACCCGTTTCTGCCTGAATAGAGTATTGTTTTTTTTTTTTTT

Coding sequence (CDS)

ATGCGAACTTCCTGGGCAGATTTGGCCGCAAGTCCGGCTGCTGAGAACGTAGCTGCTGGTTCTTCTGCTAACAATTGTAGTGCTGGAACTACTTCAGCACCTGGCCGATCGGCCTATGTTCCACCACATCTTCGGAATCGCCCTGCCTCTTCCGACCCGCCTGCTGCAGCAAATAGTGGGCCTGCTGTGGGAAACGATCGATCTGGTCATGTAGGGTCCCGCTGGCCTGGTCCAAAGAACGATTATAATCGTTCTGGTTATGGTGGTGGCAGTCGTGGAGGTGGATGGGGAAGTAGAGGAGGTGGATGGGATCGTGGGAGGGGGGACCGTGAAATGAACCCATTTGAAGATGAGGACGATACGGAGCAAGCATTTGGAGAGCAAGAAAATACTGGTATAAATTTTGATGCTTATGAAGATATTCCTGTGGAAACAAGTGGTGAAAATGTACCACCTCCGGTGAATACATTTGCTGAAATTGACTTGGGTGAAGCACTTAATCACAACATTCGGCGGTGTAAGTATGTAAAACCAACTCCCGTCCAGAGGCATGCTATTCCTATCTCCCTTGCAGGGAGAGACTTGATGGCTTGTGCTCAGACTGGATCCGGAAAGACTGCTGCCTTTTGTTTCCCCATTATCAGTGGCATAATGAAGGGCCAAAGTGTGCAGAGACCAGCTCGAGGTGCACGCACAGTGTACCCACTTGCACTTATTCTCTCCCCAACTAGGGAGCTTTCAATGCAAATACATGAAGAAGCAAGGAAATTCTCTTATCAAACAAGTGTTAGAGTGGTGGTTGCTTATGGGGGTGCACCAATCAACCAACAGCTACGTGAACTAGAAAGAGGTGTCGATATTCTTGTTGCAACACCGGGAAGATTGGTAGATTTGCTTGAAAGGGCAAAAGTTTCACTGCAGATGATAAGATACTTGGCCCTTGATGAAGCAGATCGCATGTTAGATATGGGATTTGAGCCTCAAATTAGGAAAATAGTAGAGCAAATGGACATGCCTCCACCTGGTGTAAGGCAGACTATGCTGTTCAGTGCGACTTTTCCAAGGGAAATTCAGAGACTAGCCTCTGATTTTCTTTCAAGTTACATATTTCTGGCTGTGGGAAGAGTGGGTTCAAGTACTGATCTAATTGCTCAAAGAGTTGAATTTGTTCATGAATCTGATAAGAGAAGTCATTTATTGGACCTTCTTCATGCTCAAAGGGCTAATGGTGTGCAAGGCAAGCAATCTCTTACTTTGGTTTTTGTGGAGACAAAGAAGGGAGCTGATGCTCTTGAAAATTGGTTATGTCATAATGGTTTTCCTGCCACTACTATTCATGGTGATAGAACACAACAGGAAAGAGAACACGCATTACGATCCTTTAGAAGTGGGAACACACCAATTTTGGTGGCAACTGATGTAGCTGCCCGTGGGCTTGATATTCCTCATGTTGCACATGTAGTGAACTTTGATCTCCCCAATGACATTGATGATTATGTTCATAGAATTGGACGAACGGGGAGAGCTGGGAAGACTGGTGTAGCAACTGCCTTCTTTAACGAGAACAATTCATCCATAGCAAGGTCCTTGGCTGAACTTATGCAAGAATCCAATCAAGAAGTTCCTGATTGGCTATCACGATTTGCAGCCAGGTCTTCGTACAGTGGAGGTAGAAACCGTCGTTCTGGGGGTGGTCGATTTGTTAGCCGTGACTATCGAAGGGATTCCACTTTCAACAGAGGTGGTTCTGATTATCATAGTGGAGGCAACACCAGCAGTGGTGGGGGTTATGGTGGTGGTGTTCCCGGTGGATATGGAGGAGGATACGGTGGTTCAGGGGTGACTAGTGCATGGGACTAA

Protein sequence

MRTSWADLAASPAAENVAAGSSANNCSAGTTSAPGRSAYVPPHLRNRPASSDPPAAANSGPAVGNDRSGHVGSRWPGPKNDYNRSGYGGGSRGGGWGSRGGGWDRGRGDREMNPFEDEDDTEQAFGEQENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEALNHNIRRCKYVKPTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMKGQSVQRPARGARTVYPLALILSPTRELSMQIHEEARKFSYQTSVRVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERAKVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGVRQTMLFSATFPREIQRLASDFLSSYIFLAVGRVGSSTDLIAQRVEFVHESDKRSHLLDLLHAQRANGVQGKQSLTLVFVETKKGADALENWLCHNGFPATTIHGDRTQQEREHALRSFRSGNTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKTGVATAFFNENNSSIARSLAELMQESNQEVPDWLSRFAARSSYSGGRNRRSGGGRFVSRDYRRDSTFNRGGSDYHSGGNTSSGGGYGGGVPGGYGGGYGGSGVTSAWD

Homology

[Close]

BLAST of Carg02752 vs. NCBI nr
Match: XP_022995615.1 (DEAD-box ATP-dependent RNA helicase 37-like [Cucurbita maxima])

HSP 1 Score: 1082.8 bits (2799), Expect = 0.0e+00
Identity = 604/619 (97.58%), Postives = 606/619 (97.90%), Query Frame = 0


Query: 1   MRTSWADLAASPAAENVAAGSXXXXXXXXTTSAPGRSAYVPPHLRNRPASSDPPAAANSG 60
           MRTSWADLAASPAAENVAAGS XXX    TTSAPGRS YVPPHLRNRPASSDPPAAANSG
Sbjct: 1   MRTSWADLAASPAAENVAAGSSXXXCSAGTTSAPGRSTYVPPHLRNRPASSDPPAAANSG 60

Query: 61  PAVGNDRSGHVGSRWPGPKNDYNRSGYGGGSXXXXXXXXXXXXXXXXXDREMNPFEDEDD 120
           PA GNDRSGHVGSRWPGPKNDYNRSGYGGGSXXXXXXXXXXXXXXXXXDRE+NPFEDEDD
Sbjct: 61  PAAGNDRSGHVGSRWPGPKNDYNRSGYGGGSXXXXXXXXXXXXXXXXXDREINPFEDEDD 120

Query: 121 TEQAFGEQENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEALNHNIRRCKYVKPTP 180
           T+ AFGEQENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEALN NIRRCKYVKPTP
Sbjct: 121 TDPAFGEQENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEALNQNIRRCKYVKPTP 180

Query: 181 VQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMKGQSVQRPARGARTVYPLALIL 240
           VQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMKGQSVQRPARGARTVYPLALIL
Sbjct: 181 VQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMKGQSVQRPARGARTVYPLALIL 240

Query: 241 SPTRELSMQIHEEARKFSYQTSVRVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLE 300
           SPTRELSMQIHEEARKFSYQTSVRVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLE
Sbjct: 241 SPTRELSMQIHEEARKFSYQTSVRVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLE 300

Query: 301 RAKVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGVRQTMLFSATFPREIQRL 360
           RAKVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGVRQTMLFSATFPREIQRL
Sbjct: 301 RAKVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGVRQTMLFSATFPREIQRL 360

Query: 361 ASDFLSSYIFLAVGRVGSSTDLIAQRVEFVHESDKRSHLLDLLHAQRANGVQGKQSLTLV 420
           ASDFLSSYIFLAVGRVGSSTDLIAQRVEFVHESDKRSHLLDLLHAQRANGVQGKQSLTLV
Sbjct: 361 ASDFLSSYIFLAVGRVGSSTDLIAQRVEFVHESDKRSHLLDLLHAQRANGVQGKQSLTLV 420

Query: 421 FVETKKGADALENWLCHNGFPATTIHGDRTQQEREHALRSFRSGNTPILVATDVAARGLD 480
           FVETKKGADALENWLCHNGFPATTIHGDRTQQEREHALRSFRSGNTPILVATDVAARGLD
Sbjct: 421 FVETKKGADALENWLCHNGFPATTIHGDRTQQEREHALRSFRSGNTPILVATDVAARGLD 480

Query: 481 IPHVAHVVNFDLPNDIDDYVHRIGRTXXXXXTGVATAFFNENNSSIARSLAELMQESNQE 540
           IPHVAHVVNFDLPNDIDDYVHRIGRTXXXXXTGVATAFFNENNSSIARSLAELMQESNQE
Sbjct: 481 IPHVAHVVNFDLPNDIDDYVHRIGRTXXXXXTGVATAFFNENNSSIARSLAELMQESNQE 540

Query: 541 VPDWLSRFAARSSYSGGRNRRSGGGRFVSRDYRRDSTFNRGGSDYHSGGNTXXXXXXXXX 600
           VPDWLSRFAARSSYSGGRNRRSGGGRF SRDYRRDSTFNRGGSDYHSG   XXXXXXXXX
Sbjct: 541 VPDWLSRFAARSSYSGGRNRRSGGGRFGSRDYRRDSTFNRGGSDYHSGXXXXXXXXXXXX 600

Query: 601 XXXXXXXXXXXXGVTSAWD 620
           XXXXXXXXXXXXGVTSAWD
Sbjct: 601 XXXXXXXXXXXXGVTSAWD 619

[Close]

BLAST of Carg02752 vs. NCBI nr
Match: XP_023533696.1 (DEAD-box ATP-dependent RNA helicase 37-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1077.8 bits (2786), Expect = 0.0e+00
Identity = 609/619 (98.38%), Postives = 610/619 (98.55%), Query Frame = 0


Query: 1   MRTSWADLAASPAAENVAAGSXXXXXXXXTTSAPGRSAYVPPHLRNRPASSDPPAAANSG 60
           MRTSWADLAASPAAENVAAG XXXXXXXXTTSAPGRSAYVPPHLRNRPASSDPPAAANSG
Sbjct: 1   MRTSWADLAASPAAENVAAGXXXXXXXXXTTSAPGRSAYVPPHLRNRPASSDPPAAANSG 60

Query: 61  PAVGNDRSGHVGSRWPGPKNDYNRSGYGGGSXXXXXXXXXXXXXXXXXDREMNPFEDEDD 120
           PA GNDRSGHVGSRWPGPKNDYNRSGYGGG XXXXXXXXXXXXXXXXX  EMNPFEDEDD
Sbjct: 61  PAAGNDRSGHVGSRWPGPKNDYNRSGYGGG-XXXXXXXXXXXXXXXXXXXEMNPFEDEDD 120

Query: 121 TEQAFGEQENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEALNHNIRRCKYVKPTP 180
           TEQAFGEQENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEALNHNIRRCKYVKPTP
Sbjct: 121 TEQAFGEQENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEALNHNIRRCKYVKPTP 180

Query: 181 VQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMKGQSVQRPARGARTVYPLALIL 240
           VQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMKGQSVQRPARGARTVYPLALIL
Sbjct: 181 VQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMKGQSVQRPARGARTVYPLALIL 240

Query: 241 SPTRELSMQIHEEARKFSYQTSVRVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLE 300
           SPTRELSMQIHEEARKFSYQTSVRVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLE
Sbjct: 241 SPTRELSMQIHEEARKFSYQTSVRVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLE 300

Query: 301 RAKVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGVRQTMLFSATFPREIQRL 360
           RAKVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGVRQTMLFSATFPREIQRL
Sbjct: 301 RAKVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGVRQTMLFSATFPREIQRL 360

Query: 361 ASDFLSSYIFLAVGRVGSSTDLIAQRVEFVHESDKRSHLLDLLHAQRANGVQGKQSLTLV 420
           ASDFLSSYIFLAVGRVGSSTDLIAQRVEFVHESDKRSHLLDLLHAQRANGVQGKQSLTLV
Sbjct: 361 ASDFLSSYIFLAVGRVGSSTDLIAQRVEFVHESDKRSHLLDLLHAQRANGVQGKQSLTLV 420

Query: 421 FVETKKGADALENWLCHNGFPATTIHGDRTQQEREHALRSFRSGNTPILVATDVAARGLD 480
           FVETKKGADALENWLCHNGFPATTIHGDRTQQEREHALRSFRSGNTPILVATDVAARGLD
Sbjct: 421 FVETKKGADALENWLCHNGFPATTIHGDRTQQEREHALRSFRSGNTPILVATDVAARGLD 480

Query: 481 IPHVAHVVNFDLPNDIDDYVHRIGRTXXXXXTGVATAFFNENNSSIARSLAELMQESNQE 540
           IPHVAHVVNFDLPNDIDDYVHRIGRTXXXXXTGVATAFFNENNSSIARSLAELMQESNQE
Sbjct: 481 IPHVAHVVNFDLPNDIDDYVHRIGRTXXXXXTGVATAFFNENNSSIARSLAELMQESNQE 540

Query: 541 VPDWLSRFAARSSYSGGRNRRSGGGRFVSRDYRRDSTFNRGGSDYHSGGNTXXXXXXXXX 600
           VP+WLSRFAARSSYSGGRNRRSGGGRF SRDYRRDSTFNRGGSDYHSG   XXXXXXXXX
Sbjct: 541 VPEWLSRFAARSSYSGGRNRRSGGGRFGSRDYRRDSTFNRGGSDYHSGXXXXXXXXXXXX 600

Query: 601 XXXXXXXXXXXXGVTSAWD 620
           XXXXXXXXXXXXGVTSAWD
Sbjct: 601 XXXXXXXXXXXXGVTSAWD 618

[Close]

BLAST of Carg02752 vs. NCBI nr
Match: XP_022958617.1 (DEAD-box ATP-dependent RNA helicase 37-like [Cucurbita moschata])

HSP 1 Score: 1071.2 bits (2769), Expect = 1.3e-309
Identity = 579/580 (99.83%), Postives = 579/580 (99.83%), Query Frame = 0


Query: 1   MRTSWADLAASPAAENVAAGSXXXXXXXXTTSAPGRSAYVPPHLRNRPASSDPPAAANSG 60
           MRTSWADLAASPAAENVAAGSXXXXXXXXTTSAPGRSAYVPPHLRNRPASSDPPAAANSG
Sbjct: 1   MRTSWADLAASPAAENVAAGSXXXXXXXXTTSAPGRSAYVPPHLRNRPASSDPPAAANSG 60

Query: 61  PAVGNDRSGHVGSRWPGPKNDYNRSGYGGGSXXXXXXXXXXXXXXXXXDREMNPFEDEDD 120
           PAVGNDRSGHVGSRWPGPKNDYNRSGYGGGSXXXXXXXXXXXXXXXXXDREMNPFEDEDD
Sbjct: 61  PAVGNDRSGHVGSRWPGPKNDYNRSGYGGGSXXXXXXXXXXXXXXXXXDREMNPFEDEDD 120

Query: 121 TEQAFGEQENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEALNHNIRRCKYVKPTP 180
           TEQAFGEQENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEALNHNIRRCKYVKPTP
Sbjct: 121 TEQAFGEQENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEALNHNIRRCKYVKPTP 180

Query: 181 VQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMKGQSVQRPARGARTVYPLALIL 240
           VQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMKGQSVQRPARGARTVYPLALIL
Sbjct: 181 VQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMKGQSVQRPARGARTVYPLALIL 240

Query: 241 SPTRELSMQIHEEARKFSYQTSVRVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLE 300
           SPTRELSMQIHEEARKFSYQTSVRVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLE
Sbjct: 241 SPTRELSMQIHEEARKFSYQTSVRVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLE 300

Query: 301 RAKVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGVRQTMLFSATFPREIQRL 360
           RAKVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGVRQTMLFSATFPREIQRL
Sbjct: 301 RAKVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGVRQTMLFSATFPREIQRL 360

Query: 361 ASDFLSSYIFLAVGRVGSSTDLIAQRVEFVHESDKRSHLLDLLHAQRANGVQGKQSLTLV 420
           ASDFLSSYIFLAVGRVGSSTDLIAQRVEFVHESDKRSHLLDLLHAQRANGVQGKQSLTLV
Sbjct: 361 ASDFLSSYIFLAVGRVGSSTDLIAQRVEFVHESDKRSHLLDLLHAQRANGVQGKQSLTLV 420

Query: 421 FVETKKGADALENWLCHNGFPATTIHGDRTQQEREHALRSFRSGNTPILVATDVAARGLD 480
           FVETKKGADALENWLCHNGFPATTIHGDRTQQEREHALRSFRSGNTPILVATDVAARGLD
Sbjct: 421 FVETKKGADALENWLCHNGFPATTIHGDRTQQEREHALRSFRSGNTPILVATDVAARGLD 480

Query: 481 IPHVAHVVNFDLPNDIDDYVHRIGRTXXXXXTGVATAFFNENNSSIARSLAELMQESNQE 540
           IPHVAHVVNFDLPNDIDDYVHRIGRTXXXXXTGVATAFFNENNSSIARSLAELMQESNQE
Sbjct: 481 IPHVAHVVNFDLPNDIDDYVHRIGRTXXXXXTGVATAFFNENNSSIARSLAELMQESNQE 540

Query: 541 VPDWLSRFAARSSYSGGRNRRSGGGRFVSRDYRRDSTFNR 581
           VPDWLSRFAARSSYSGGRNRRSGGGRF SRDYRRDSTFNR
Sbjct: 541 VPDWLSRFAARSSYSGGRNRRSGGGRFGSRDYRRDSTFNR 580

[Close]

BLAST of Carg02752 vs. NCBI nr
Match: XP_022153767.1 (DEAD-box ATP-dependent RNA helicase 37-like [Momordica charantia] >XP_022153768.1 DEAD-box ATP-dependent RNA helicase 37-like [Momordica charantia])

HSP 1 Score: 1008.4 bits (2606), Expect = 1.0e-290
Identity = 545/590 (92.37%), Postives = 562/590 (95.25%), Query Frame = 0


Query: 1   MRTSWADLAASPAAENVAAGSXXXXXXXXTTSAPGRSAYVPPHLRNRPASSDPPAAANSG 60
           MRTSWADLAAS AAENVA   XXXXX   TTSAPGRS YVPPHLRNRPASSDPPAAANSG
Sbjct: 1   MRTSWADLAASSAAENVAGXXXXXXXSAGTTSAPGRSTYVPPHLRNRPASSDPPAAANSG 60

Query: 61  PAVGNDRSGHVGSRW-PGPKNDYNRSGYGGG--SXXXXXXXXXXXXXXXXXDREMNPFED 120
           PA GNDRSG+VG RW  GP+NDYNRSGYGGG   XXXXXXXXXXXXXXXX DRE+NPF D
Sbjct: 61  PAAGNDRSGNVGPRWGGGPRNDYNRSGYGGGXXXXXXXXXXXXXXXXXXXGDREVNPFGD 120

Query: 121 EDDTEQAFGEQENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEALNHNIRRCKYVK 180
           +DDTEQ FGEQENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEALNHNIRRCKYVK
Sbjct: 121 DDDTEQEFGEQENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEALNHNIRRCKYVK 180

Query: 181 PTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMKGQSVQRPARGARTVYPLA 240
           PTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMKGQ++QRPARGARTVYPLA
Sbjct: 181 PTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMKGQAMQRPARGARTVYPLA 240

Query: 241 LILSPTRELSMQIHEEARKFSYQTSVRVVVAYGGAPINQQLRELERGVDILVATPGRLVD 300
           LILSPTRELSMQIHEEARKFSYQT VRVVVAYGGAPINQQLR+LERGVDILVATPGRLVD
Sbjct: 241 LILSPTRELSMQIHEEARKFSYQTGVRVVVAYGGAPINQQLRDLERGVDILVATPGRLVD 300

Query: 301 LLERAKVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGVRQTMLFSATFPREI 360
           LLERAKVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPG RQTMLFSATFPREI
Sbjct: 301 LLERAKVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGXRQTMLFSATFPREI 360

Query: 361 QRLASDFLSSYIFLAVGRVGSSTDLIAQRVEFVHESDKRSHLLDLLHAQRANGVQGKQSL 420
           QRLASDFLSSYIFLAVGRVGSSTDLIAQRVEFVHE+DKRSHLLDLLHAQRANGVQGKQSL
Sbjct: 361 QRLASDFLSSYIFLAVGRVGSSTDLIAQRVEFVHEADKRSHLLDLLHAQRANGVQGKQSL 420

Query: 421 TLVFVETKKGADALENWLCHNGFPATTIHGDRTQQEREHALRSFRSGNTPILVATDVAAR 480
           TLVFVETKKGAD+LE+WLC NGFPATTIHGDRTQQERE ALRSFRSGNTPILVATDVAAR
Sbjct: 421 TLVFVETKKGADSLEHWLCLNGFPATTIHGDRTQQEREQALRSFRSGNTPILVATDVAAR 480

Query: 481 GLDIPHVAHVVNFDLPNDIDDYVHRIGRTXXXXXTGVATAFFNENNSSIARSLAELMQES 540
           GLDIPHVAHVVNFDLPNDIDDYVHRIGRT XXXXTG+ATAFFNENNSSIARSLA+LM ES
Sbjct: 481 GLDIPHVAHVVNFDLPNDIDDYVHRIGRTGXXXXTGLATAFFNENNSSIARSLADLMHES 540

Query: 541 NQEVPDWLSRFAARSSYSGGRNRRSGGGRFVSRDYRRDSTFNRGGSDYHS 588
           NQEVP+WL RFAARSSY+GGRNRRSGGGRF SRDYRRD +FNRG SDY++
Sbjct: 541 NQEVPEWLLRFAARSSYTGGRNRRSGGGRFGSRDYRRDPSFNRGSSDYYT 590

[Close]

BLAST of Carg02752 vs. NCBI nr
Match: XP_022943844.1 (DEAD-box ATP-dependent RNA helicase 37-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 961.8 bits (2485), Expect = 1.1e-276
Identity = 521/557 (93.54%), Postives = 535/557 (96.05%), Query Frame = 0


Query: 1   MRTSWADLAASPAAENVAAGSXXXXXXXXTTSAPGRSAYVPPHLRNRPASSDPPAAANSG 60
           MRTSWADLAAS AA+      XXXXXXXX  +APGRSAYVPPHLRNRPASSDPPAAANSG
Sbjct: 1   MRTSWADLAASSAADXXXXXXXXXXXXXXXXTAPGRSAYVPPHLRNRPASSDPPAAANSG 60

Query: 61  PAVGNDRSGHVGSRWPGPKNDYNRSGYGGGSXXXXXXXXXXXXXXXXXDREMNPFEDEDD 120
           PAVGNDRSG+VG RW GP+NDYNRSGYGGGSXXXXXXXXXXXXXXXXXDRE+NPF D+DD
Sbjct: 61  PAVGNDRSGNVGPRWGGPRNDYNRSGYGGGSXXXXXXXXXXXXXXXXXDREVNPFGDDDD 120

Query: 121 TEQAFGEQENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEALNHNIRRCKYVKPTP 180
           TEQ FGEQENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEALN NIRRCKYVKPTP
Sbjct: 121 TEQEFGEQENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEALNQNIRRCKYVKPTP 180

Query: 181 VQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMKGQSVQRPARGARTVYPLALIL 240
           VQRHAIPISL GRDLMACAQTGSGKTAAFCFPIISGIMKGQ++QRPARGART YPLALIL
Sbjct: 181 VQRHAIPISLGGRDLMACAQTGSGKTAAFCFPIISGIMKGQNMQRPARGARTAYPLALIL 240

Query: 241 SPTRELSMQIHEEARKFSYQTSVRVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLE 300
           SPTRELSMQIHEEARKFSYQT VRVVVAYGG+PIN QLR+LERG DILVATPGRLVDLLE
Sbjct: 241 SPTRELSMQIHEEARKFSYQTGVRVVVAYGGSPINLQLRDLERGADILVATPGRLVDLLE 300

Query: 301 RAKVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGVRQTMLFSATFPREIQRL 360
           RAKVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGVRQTMLFSATFPREIQRL
Sbjct: 301 RAKVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGVRQTMLFSATFPREIQRL 360

Query: 361 ASDFLSSYIFLAVGRVGSSTDLIAQRVEFVHESDKRSHLLDLLHAQRANGVQGKQSLTLV 420
           ASDFLSSYIFLAVGRVGSSTDLIAQRVEFVHESDKRSHLLDLLHAQR+NGVQGKQSLTLV
Sbjct: 361 ASDFLSSYIFLAVGRVGSSTDLIAQRVEFVHESDKRSHLLDLLHAQRSNGVQGKQSLTLV 420

Query: 421 FVETKKGADALENWLCHNGFPATTIHGDRTQQEREHALRSFRSGNTPILVATDVAARGLD 480
           FVETKKGADALE+WLC NGFPATTIHGDRTQQERE ALRSFRSGNTPILVATDVAARGLD
Sbjct: 421 FVETKKGADALEHWLCLNGFPATTIHGDRTQQEREQALRSFRSGNTPILVATDVAARGLD 480

Query: 481 IPHVAHVVNFDLPNDIDDYVHRIGRTXXXXXTGVATAFFNENNSSIARSLAELMQESNQE 540
           IPHVAHVVNFDLPNDIDDYVHRIGRT XXXXTG+ATAFFNENNSSIARSLA+LMQESNQE
Sbjct: 481 IPHVAHVVNFDLPNDIDDYVHRIGRTGXXXXTGLATAFFNENNSSIARSLADLMQESNQE 540

Query: 541 VPDWLSRFAARSSYSGG 558
           VPDWLSRFAARSSYSGG
Sbjct: 541 VPDWLSRFAARSSYSGG 557

[Close]

BLAST of Carg02752 vs. TAIR10
Match: AT2G42520.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 780.4 bits (2014), Expect = 8.2e-226
Identity = 439/580 (75.69%), Postives = 486/580 (83.79%), Query Frame = 0


Query: 1   MRTSWADLAASPAAENVAAGSXXXXXXXXTTSAPGRSAYVPPHLRNRPASSDPPAAANSG 60
           M  SWAD+A S   EN  +GS          S P R AYVPPHLRNRPA+S+P A     
Sbjct: 1   MSASWADVADS---ENTGSGS------SNQNSHPSRPAYVPPHLRNRPAASEPVA----- 60

Query: 61  PAVGNDRSGH----VGSRW-------------PGPKNDYNRSGYGGGSXXXXXXXXXXXX 120
           P   NDR G+     GSRW                             XXXXXXXXXXXX
Sbjct: 61  PLPANDRVGYGGPPSGSRWAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXDREMNPFEDED-DTEQAFGEQENTGINFDAYEDIPVETSGENVPPPVNTFAEIDL 180
           XXXXX+RE+NPFE++D + E AF EQ+NT INFDAYEDIP+ETSG+NVPPPVNTFAEIDL
Sbjct: 121 XXXXXEREVNPFENDDSEPEPAFTEQDNTVINFDAYEDIPIETSGDNVPPPVNTFAEIDL 180

Query: 181 GEALNHNIRRCKYVKPTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMKGQS 240
           GEALN NIRRCKYVKPTPVQRHAIPI L GRDLMACAQTGSGKTAAFCFPIISGIMK Q 
Sbjct: 181 GEALNLNIRRCKYVKPTPVQRHAIPILLEGRDLMACAQTGSGKTAAFCFPIISGIMKDQH 240

Query: 241 VQRPARGARTVYPLALILSPTRELSMQIHEEARKFSYQTSVRVVVAYGGAPINQQLRELE 300
           VQRP RG+RTVYPLA+ILSPTREL+ QIH+EA+KFSYQT V+VVVAYGG PINQQLRELE
Sbjct: 241 VQRP-RGSRTVYPLAVILSPTRELASQIHDEAKKFSYQTGVKVVVAYGGTPINQQLRELE 300

Query: 301 RGVDILVATPGRLVDLLERAKVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPG 360
           RGVDILVATPGRL DLLERA+VS+QMIR+LALDEADRMLDMGFEPQIRKIVEQMDMPP G
Sbjct: 301 RGVDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRG 360

Query: 361 VRQTMLFSATFPREIQRLASDFLSSYIFLAVGRVGSSTDLIAQRVEFVHESDKRSHLLDL 420
           VRQT+LFSATFPREIQRLA+DFL++YIFLAVGRVGSSTDLI QRVEFV +SDKRSHL+DL
Sbjct: 361 VRQTLLFSATFPREIQRLAADFLANYIFLAVGRVGSSTDLIVQRVEFVLDSDKRSHLMDL 420

Query: 421 LHAQRANGVQGKQSLTLVFVETKKGADALENWLCHNGFPATTIHGDRTQQEREHALRSFR 480
           LHAQR NG+QGKQ+LTLVFVETK+GAD+LENWLC NGFPAT+IHGDRTQQERE AL++F+
Sbjct: 421 LHAQRENGIQGKQALTLVFVETKRGADSLENWLCINGFPATSIHGDRTQQEREVALKAFK 480

Query: 481 SGNTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTXXXXXTGVATAFFNEN 540
           SG TPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIG  XXXXX  +ATAFFN+ 
Sbjct: 481 SGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGXXXXXXXXXLATAFFNDG 540

Query: 541 NSSIARSLAELMQESNQEVPDWLSRFAARSSYSGGRNRRS 563
           N+S+AR LAELMQE+NQEVP+WL+R+A+RSS+ GG+NRRS
Sbjct: 541 NTSLARPLAELMQEANQEVPEWLTRYASRSSFGGGKNRRS 565

[Close]

BLAST of Carg02752 vs. TAIR10
Match: AT3G58570.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 774.6 bits (1999), Expect = 4.5e-224
Identity = 429/577 (74.35%), Postives = 483/577 (83.71%), Query Frame = 0


Query: 4   SWADLAASPAAENVAAGSXXXXXXXXTTSAPGRSAYVPPHLRNRPASSDPPAAANSGPAV 63
           SWAD++ S   E   +G           S P R+ YVPPHLR+R  SS+  A     P+ 
Sbjct: 5   SWADVSES---ERAPSGGGWGY------SRPSRTNYVPPHLRSRTPSSEFVA-----PSP 64

Query: 64  G-NDRSGHVGS---RWPGPKNDYNRSGYGGGSXXXXXXXXXXXXXXXXXDREMNPFEDED 123
           G NDR G+ G+                     XXXXXXXXXXXXXXXXX  E NPF ++ 
Sbjct: 65  GNNDRGGYGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTETNPFGNDG 124

Query: 124 DTEQAFGEQENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEALNHNIRRCKYVKPT 183
           + + A  EQENT INF+AYEDIP+ETSG+NVPPPVNTFAEIDLGEALN NI+RCKYVKPT
Sbjct: 125 NADPAVNEQENTVINFEAYEDIPIETSGDNVPPPVNTFAEIDLGEALNLNIQRCKYVKPT 184

Query: 184 PVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMKGQSVQRPARGARTVYPLALI 243
           PVQR+AIPI  AGRDLMACAQTGSGKTAAFCFPIISGIMK Q ++RP RG R VYPLA+I
Sbjct: 185 PVQRNAIPILAAGRDLMACAQTGSGKTAAFCFPIISGIMKDQHIERP-RGVRGVYPLAVI 244

Query: 244 LSPTRELSMQIHEEARKFSYQTSVRVVVAYGGAPINQQLRELERGVDILVATPGRLVDLL 303
           LSPTREL+ QIH+EARKFSYQT V+VVVAYGG P+NQQ+RELERGVDILVATPGRL DLL
Sbjct: 245 LSPTRELACQIHDEARKFSYQTGVKVVVAYGGTPVNQQIRELERGVDILVATPGRLNDLL 304

Query: 304 ERAKVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGVRQTMLFSATFPREIQR 363
           ER +VSLQM+R+LALDEADRMLDMGFEPQIRKIV+QMDMPPPGVRQTMLFSATFPREIQR
Sbjct: 305 ERGRVSLQMVRFLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPREIQR 364

Query: 364 LASDFLSSYIFLAVGRVGSSTDLIAQRVEFVHESDKRSHLLDLLHAQRANGVQGKQSLTL 423
           LASDFLS+YIFLAVGRVGSSTDLI QRVEFVH+SDKRSHL+DLLHAQR NG QGKQ+LTL
Sbjct: 365 LASDFLSNYIFLAVGRVGSSTDLIVQRVEFVHDSDKRSHLMDLLHAQRENGNQGKQALTL 424

Query: 424 VFVETKKGADALENWLCHNGFPATTIHGDRTQQEREHALRSFRSGNTPILVATDVAARGL 483
           VFVETKKGAD+LENWLC NGFPATTIHGDR+QQERE ALRSF++G TPILVATDVAARGL
Sbjct: 425 VFVETKKGADSLENWLCINGFPATTIHGDRSQQEREVALRSFKTGRTPILVATDVAARGL 484

Query: 484 DIPHVAHVVNFDLPNDIDDYVHRIGRTXXXXXTGVATAFFNENNSSIARSLAELMQESNQ 543
           DIPHVAHVVNFDLPNDIDDYVHRIGRT     +G+ATAFFN+NN+++A+ LAELMQE+NQ
Sbjct: 485 DIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGNSGLATAFFNDNNTTMAKPLAELMQEANQ 544

Query: 544 EVPDWLSRFAARSSYSGGRNRRSGGGRFVSRDYRRDS 577
           EVPDWL+R+A+R+S+ GG+NRRS GGRF  RD+RR+S
Sbjct: 545 EVPDWLTRYASRASFGGGKNRRS-GGRFGGRDFRRES 565

[Close]

BLAST of Carg02752 vs. TAIR10
Match: AT3G58510.1 (DEA(D/H)-box RNA helicase family protein)

HSP 1 Score: 731.9 bits (1888), Expect = 3.3e-211
Identity = 414/575 (72.00%), Postives = 458/575 (79.65%), Query Frame = 0


Query: 1   MRTSWADLAASPAAENVAAGSXXXXXXXXTTSAPGRSAYVPPHLRNRPASSDPPAAANSG 60
           M  SWAD+A S  A                  +  +  YVPPHLRNRP  S+P AA    
Sbjct: 1   MSASWADVADSEKA-----------------VSQSKPPYVPPHLRNRP--SEPVAA---- 60

Query: 61  PAVGNDRSGH----VGSRW---------------PGPKNDYNRSGYGGGSXXXXXXXXXX 120
           P   ND +G+     GSRW                               XXXXXXXXXX
Sbjct: 61  PLPQNDHAGYGGQPAGSRWAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXDREMNPFEDEDDTEQAFGEQENTGINFDAYEDIPVETSGENVPPPVNTFAEID 180
           XXX    +RE+NPF D+ + E  F EQENTGINFDAYEDIPVETSG +VPPPVNTFA+ID
Sbjct: 121 XXXWDRREREVNPFGDDAELEPVFTEQENTGINFDAYEDIPVETSGGDVPPPVNTFADID 180

Query: 181 LGEALNHNIRRCKYVKPTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMKGQ 240
           LG+ALN NIRRCKYV+PTPVQRHAIPI LA RDLMACAQTGSGKTAAFCFPIISGIMK Q
Sbjct: 181 LGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCFPIISGIMKDQ 240

Query: 241 SVQRPARGARTVYPLALILSPTRELSMQIHEEARKFSYQTSVRVVVAYGGAPINQQLREL 300
            V+RP RG+R VYP A+ILSPTREL+ QIH+EA+KFSYQT V+VVVAYGG PI+QQLREL
Sbjct: 241 HVERP-RGSRAVYPFAVILSPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIHQQLREL 300

Query: 301 ERGVDILVATPGRLVDLLERAKVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPP 360
           ERG DILVATPGRL DLLERA+VS+QMIR+LALDEADRMLDMGFEPQIRKIVEQMDMPP 
Sbjct: 301 ERGCDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPR 360

Query: 361 GVRQTMLFSATFPREIQRLASDFLSSYIFLAVGRVGSSTDLIAQRVEFVHESDKRSHLLD 420
           GVRQTMLFSATFP +IQRLA+DF+S+YIFLAVGRVGSSTDLI QRVEFV ESDKRSHL+D
Sbjct: 361 GVRQTMLFSATFPSQIQRLAADFMSNYIFLAVGRVGSSTDLITQRVEFVQESDKRSHLMD 420

Query: 421 LLHAQRANGVQGKQSLTLVFVETKKGADALENWLCHNGFPATTIHGDRTQQEREHALRSF 480
           LLHAQR    Q KQSLTLVFVETK+GAD LENWLC N FPAT+IHGDRTQQERE ALRSF
Sbjct: 421 LLHAQRE--TQDKQSLTLVFVETKRGADTLENWLCMNEFPATSIHGDRTQQEREVALRSF 480

Query: 481 RSGNTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTXXXXXTGVATAFFNE 540
           ++G TPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIG  XXXXX G+ATAFFNE
Sbjct: 481 KTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGXXXXXXXXGIATAFFNE 540

Query: 541 NNSSIARSLAELMQESNQEVPDWLSRFAARSSYSG 557
           NN+ +ARSLAELMQE+NQEVP+WL+R+A+R+S+ G
Sbjct: 541 NNAQLARSLAELMQEANQEVPEWLTRYASRASFGG 549

[Close]

BLAST of Carg02752 vs. TAIR10
Match: AT5G63120.2 (P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 338.6 bits (867), Expect = 8.2e-93
Identity = 202/447 (45.19%), Postives = 272/447 (60.85%), Query Frame = 0


Query: 115 FEDEDDTEQAFGEQENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEALNHNIRRCK 174
           F  E  T QA  EQ+     +    DI VE  G +VP P+  F + +  + +   I +  
Sbjct: 129 FYVESPTVQAMTEQDVA--MYRTERDISVE--GRDVPKPMKMFQDANFPDNILEAIAKLG 188

Query: 175 YVKPTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMKGQSVQRPARGARTVY 234
           + +PTP+Q    P++L GRDL+  A+TGSGKT A+  P +        V    R  +   
Sbjct: 189 FTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAL------VHVSAQPRLGQDDG 248

Query: 235 PLALILSPTRELSMQIHEEARKFSYQTSVRVVVAYGGAPINQQLRELERGVDILVATPGR 294
           P+ LIL+PTREL++QI EE+RKF  ++ VR    YGGAP   Q+R+L RGV+I++ATPGR
Sbjct: 249 PIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGR 308

Query: 295 LVDLLERAKVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGVRQTMLFSATFP 354
           L+D+LE    +L+ + YL LDEADRMLDMGFEPQIRKIV Q+       RQT+L+SAT+P
Sbjct: 309 LIDMLECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPD----RQTLLWSATWP 368

Query: 355 REIQRLASDFLSSYIFLAVGRVGSSTDL-----IAQRVEFVHESDKRSHLLDLLHAQRAN 414
           RE++ LA  FL       +G    STDL     I Q +E V   +K + LL LL  Q  +
Sbjct: 369 REVETLARQFLRDPYKAIIG----STDLKANQSINQVIEIVPTPEKYNRLLTLL-KQLMD 428

Query: 415 GVQGKQSLTLVFVETKKGADALENWLCHNGFPATTIHGDRTQQEREHALRSFRSGNTPIL 474
           G     S  L+FVETK+G D +   L  +G+PA  IHGD+TQ ER+  L  F+SG +PI+
Sbjct: 429 G-----SKILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIM 488

Query: 475 VATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTXXXXXTGVATAFFNENNSSIARS 534
            ATDVAARGLD+  +  VVN+D PN ++DY+HRIGRT      G+A  FF  +N+  AR 
Sbjct: 489 TATDVAARGLDVKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNAKFARE 548

Query: 535 LAELMQESNQEVPDWLSRFAARSSYSG 557
           L +++QE+ Q VP  LS    RSS SG
Sbjct: 549 LVKILQEAGQVVPPTLSAL-VRSSGSG 550

[Close]

BLAST of Carg02752 vs. TAIR10
Match: AT3G01540.2 (DEAD box RNA helicase 1)

HSP 1 Score: 324.3 bits (830), Expect = 1.6e-88
Identity = 183/425 (43.06%), Postives = 256/425 (60.24%), Query Frame = 0


Query: 143 VETSGENVPPPVNTFAEIDLGEALNHNIRRCKYVKPTPVQRHAIPISLAGRDLMACAQTG 202
           +  SG  VPPP+ +F        L   +    +  PTP+Q  + PI++ GRD++A A+TG
Sbjct: 146 ITVSGGQVPPPLMSFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTG 205

Query: 203 SGKTAAFCFPIISGIMKGQSVQRPARGARTVYPLALILSPTRELSMQIHEEARKFSYQTS 262
           SGKT  +  P   G +  Q ++  +R    + P  L+LSPTREL+ QI EEA KF   + 
Sbjct: 206 SGKTLGYLIP---GFLHLQRIRNDSR----MGPTILVLSPTRELATQIQEEAVKFGRSSR 265

Query: 263 VRVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERAKVSLQMIRYLALDEADRMLD 322
           +     YGGAP   QLR+LERG DI+VATPGRL D+LE  ++SL+ I YL LDEADRMLD
Sbjct: 266 ISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLD 325

Query: 323 MGFEPQIRKIVEQMDMPPPGVRQTMLFSATFPREIQRLASDFLSSYIFLAVGRVGS--ST 382
           MGFEPQIRKIV+++    P  RQT++++AT+P+ ++++A+D L +   + +G V    + 
Sbjct: 326 MGFEPQIRKIVKEI----PTKRQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVAN 385

Query: 383 DLIAQRVEFVHESDKRSHLLDLLHAQRANGVQGKQSLTLVFVETKKGADALENWLCHNGF 442
             I Q +E V   +K+  L  +L +Q         S  ++F  TK+  D L   L    F
Sbjct: 386 KSITQHIEVVAPMEKQRRLEQILRSQEPG------SKVIIFCSTKRMCDQLTRNLTRQ-F 445

Query: 443 PATTIHGDRTQQEREHALRSFRSGNTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYV 502
            A  IHGD++Q ER++ L  FRSG TP+LVATDVAARGLD+  +  VVN+D PN ++DYV
Sbjct: 446 GAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYV 505

Query: 503 HRIGRTXXXXXTGVATAFFNENNSSIARSLAELMQESNQEVPDWLSRFAARSSYSGGRNR 562
           HRIGRT     TG A  FF + +S  A  L ++++ +NQ VP  +   A R    GG N+
Sbjct: 506 HRIGRTGRAGATGQAFTFFGDQDSKHASDLIKILEGANQRVPPQIREMATRG--GGGMNK 550

Query: 563 RSGGG 566
            S  G
Sbjct: 566 FSRWG 550

[Close]

BLAST of Carg02752 vs. Swiss-Prot
Match: sp|Q84W89|RH37_ARATH (DEAD-box ATP-dependent RNA helicase 37 OS=Arabidopsis thaliana OX=3702 GN=RH37 PE=2 SV=2)

HSP 1 Score: 780.4 bits (2014), Expect = 1.5e-224
Identity = 439/580 (75.69%), Postives = 486/580 (83.79%), Query Frame = 0


Query: 1   MRTSWADLAASPAAENVAAGSXXXXXXXXTTSAPGRSAYVPPHLRNRPASSDPPAAANSG 60
           M  SWAD+A S   EN  +GS          S P R AYVPPHLRNRPA+S+P A     
Sbjct: 1   MSASWADVADS---ENTGSGS------SNQNSHPSRPAYVPPHLRNRPAASEPVA----- 60

Query: 61  PAVGNDRSGH----VGSRW-------------PGPKNDYNRSGYGGGSXXXXXXXXXXXX 120
           P   NDR G+     GSRW                             XXXXXXXXXXXX
Sbjct: 61  PLPANDRVGYGGPPSGSRWAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXDREMNPFEDED-DTEQAFGEQENTGINFDAYEDIPVETSGENVPPPVNTFAEIDL 180
           XXXXX+RE+NPFE++D + E AF EQ+NT INFDAYEDIP+ETSG+NVPPPVNTFAEIDL
Sbjct: 121 XXXXXEREVNPFENDDSEPEPAFTEQDNTVINFDAYEDIPIETSGDNVPPPVNTFAEIDL 180

Query: 181 GEALNHNIRRCKYVKPTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMKGQS 240
           GEALN NIRRCKYVKPTPVQRHAIPI L GRDLMACAQTGSGKTAAFCFPIISGIMK Q 
Sbjct: 181 GEALNLNIRRCKYVKPTPVQRHAIPILLEGRDLMACAQTGSGKTAAFCFPIISGIMKDQH 240

Query: 241 VQRPARGARTVYPLALILSPTRELSMQIHEEARKFSYQTSVRVVVAYGGAPINQQLRELE 300
           VQRP RG+RTVYPLA+ILSPTREL+ QIH+EA+KFSYQT V+VVVAYGG PINQQLRELE
Sbjct: 241 VQRP-RGSRTVYPLAVILSPTRELASQIHDEAKKFSYQTGVKVVVAYGGTPINQQLRELE 300

Query: 301 RGVDILVATPGRLVDLLERAKVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPG 360
           RGVDILVATPGRL DLLERA+VS+QMIR+LALDEADRMLDMGFEPQIRKIVEQMDMPP G
Sbjct: 301 RGVDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRG 360

Query: 361 VRQTMLFSATFPREIQRLASDFLSSYIFLAVGRVGSSTDLIAQRVEFVHESDKRSHLLDL 420
           VRQT+LFSATFPREIQRLA+DFL++YIFLAVGRVGSSTDLI QRVEFV +SDKRSHL+DL
Sbjct: 361 VRQTLLFSATFPREIQRLAADFLANYIFLAVGRVGSSTDLIVQRVEFVLDSDKRSHLMDL 420

Query: 421 LHAQRANGVQGKQSLTLVFVETKKGADALENWLCHNGFPATTIHGDRTQQEREHALRSFR 480
           LHAQR NG+QGKQ+LTLVFVETK+GAD+LENWLC NGFPAT+IHGDRTQQERE AL++F+
Sbjct: 421 LHAQRENGIQGKQALTLVFVETKRGADSLENWLCINGFPATSIHGDRTQQEREVALKAFK 480

Query: 481 SGNTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTXXXXXTGVATAFFNEN 540
           SG TPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIG  XXXXX  +ATAFFN+ 
Sbjct: 481 SGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGXXXXXXXXXLATAFFNDG 540

Query: 541 NSSIARSLAELMQESNQEVPDWLSRFAARSSYSGGRNRRS 563
           N+S+AR LAELMQE+NQEVP+WL+R+A+RSS+ GG+NRRS
Sbjct: 541 NTSLARPLAELMQEANQEVPEWLTRYASRSSFGGGKNRRS 565

[Close]

BLAST of Carg02752 vs. Swiss-Prot
Match: sp|Q9M2F9|RH52_ARATH (DEAD-box ATP-dependent RNA helicase 52 OS=Arabidopsis thaliana OX=3702 GN=RH52 PE=1 SV=1)

HSP 1 Score: 774.6 bits (1999), Expect = 8.1e-223
Identity = 429/577 (74.35%), Postives = 483/577 (83.71%), Query Frame = 0


Query: 4   SWADLAASPAAENVAAGSXXXXXXXXTTSAPGRSAYVPPHLRNRPASSDPPAAANSGPAV 63
           SWAD++ S   E   +G           S P R+ YVPPHLR+R  SS+  A     P+ 
Sbjct: 5   SWADVSES---ERAPSGGGWGY------SRPSRTNYVPPHLRSRTPSSEFVA-----PSP 64

Query: 64  G-NDRSGHVGS---RWPGPKNDYNRSGYGGGSXXXXXXXXXXXXXXXXXDREMNPFEDED 123
           G NDR G+ G+                     XXXXXXXXXXXXXXXXX  E NPF ++ 
Sbjct: 65  GNNDRGGYGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTETNPFGNDG 124

Query: 124 DTEQAFGEQENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEALNHNIRRCKYVKPT 183
           + + A  EQENT INF+AYEDIP+ETSG+NVPPPVNTFAEIDLGEALN NI+RCKYVKPT
Sbjct: 125 NADPAVNEQENTVINFEAYEDIPIETSGDNVPPPVNTFAEIDLGEALNLNIQRCKYVKPT 184

Query: 184 PVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMKGQSVQRPARGARTVYPLALI 243
           PVQR+AIPI  AGRDLMACAQTGSGKTAAFCFPIISGIMK Q ++RP RG R VYPLA+I
Sbjct: 185 PVQRNAIPILAAGRDLMACAQTGSGKTAAFCFPIISGIMKDQHIERP-RGVRGVYPLAVI 244

Query: 244 LSPTRELSMQIHEEARKFSYQTSVRVVVAYGGAPINQQLRELERGVDILVATPGRLVDLL 303
           LSPTREL+ QIH+EARKFSYQT V+VVVAYGG P+NQQ+RELERGVDILVATPGRL DLL
Sbjct: 245 LSPTRELACQIHDEARKFSYQTGVKVVVAYGGTPVNQQIRELERGVDILVATPGRLNDLL 304

Query: 304 ERAKVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGVRQTMLFSATFPREIQR 363
           ER +VSLQM+R+LALDEADRMLDMGFEPQIRKIV+QMDMPPPGVRQTMLFSATFPREIQR
Sbjct: 305 ERGRVSLQMVRFLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPREIQR 364

Query: 364 LASDFLSSYIFLAVGRVGSSTDLIAQRVEFVHESDKRSHLLDLLHAQRANGVQGKQSLTL 423
           LASDFLS+YIFLAVGRVGSSTDLI QRVEFVH+SDKRSHL+DLLHAQR NG QGKQ+LTL
Sbjct: 365 LASDFLSNYIFLAVGRVGSSTDLIVQRVEFVHDSDKRSHLMDLLHAQRENGNQGKQALTL 424

Query: 424 VFVETKKGADALENWLCHNGFPATTIHGDRTQQEREHALRSFRSGNTPILVATDVAARGL 483
           VFVETKKGAD+LENWLC NGFPATTIHGDR+QQERE ALRSF++G TPILVATDVAARGL
Sbjct: 425 VFVETKKGADSLENWLCINGFPATTIHGDRSQQEREVALRSFKTGRTPILVATDVAARGL 484

Query: 484 DIPHVAHVVNFDLPNDIDDYVHRIGRTXXXXXTGVATAFFNENNSSIARSLAELMQESNQ 543
           DIPHVAHVVNFDLPNDIDDYVHRIGRT     +G+ATAFFN+NN+++A+ LAELMQE+NQ
Sbjct: 485 DIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGNSGLATAFFNDNNTTMAKPLAELMQEANQ 544

Query: 544 EVPDWLSRFAARSSYSGGRNRRSGGGRFVSRDYRRDS 577
           EVPDWL+R+A+R+S+ GG+NRRS GGRF  RD+RR+S
Sbjct: 545 EVPDWLTRYASRASFGGGKNRRS-GGRFGGRDFRRES 565

[Close]

BLAST of Carg02752 vs. Swiss-Prot
Match: sp|Q8LA13|RH11_ARATH (DEAD-box ATP-dependent RNA helicase 11 OS=Arabidopsis thaliana OX=3702 GN=RH11 PE=1 SV=1)

HSP 1 Score: 731.9 bits (1888), Expect = 6.0e-210
Identity = 414/575 (72.00%), Postives = 458/575 (79.65%), Query Frame = 0


Query: 1   MRTSWADLAASPAAENVAAGSXXXXXXXXTTSAPGRSAYVPPHLRNRPASSDPPAAANSG 60
           M  SWAD+A S  A                  +  +  YVPPHLRNRP  S+P AA    
Sbjct: 1   MSASWADVADSEKA-----------------VSQSKPPYVPPHLRNRP--SEPVAA---- 60

Query: 61  PAVGNDRSGH----VGSRW---------------PGPKNDYNRSGYGGGSXXXXXXXXXX 120
           P   ND +G+     GSRW                               XXXXXXXXXX
Sbjct: 61  PLPQNDHAGYGGQPAGSRWAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXDREMNPFEDEDDTEQAFGEQENTGINFDAYEDIPVETSGENVPPPVNTFAEID 180
           XXX    +RE+NPF D+ + E  F EQENTGINFDAYEDIPVETSG +VPPPVNTFA+ID
Sbjct: 121 XXXWDRREREVNPFGDDAELEPVFTEQENTGINFDAYEDIPVETSGGDVPPPVNTFADID 180

Query: 181 LGEALNHNIRRCKYVKPTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMKGQ 240
           LG+ALN NIRRCKYV+PTPVQRHAIPI LA RDLMACAQTGSGKTAAFCFPIISGIMK Q
Sbjct: 181 LGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCFPIISGIMKDQ 240

Query: 241 SVQRPARGARTVYPLALILSPTRELSMQIHEEARKFSYQTSVRVVVAYGGAPINQQLREL 300
            V+RP RG+R VYP A+ILSPTREL+ QIH+EA+KFSYQT V+VVVAYGG PI+QQLREL
Sbjct: 241 HVERP-RGSRAVYPFAVILSPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIHQQLREL 300

Query: 301 ERGVDILVATPGRLVDLLERAKVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPP 360
           ERG DILVATPGRL DLLERA+VS+QMIR+LALDEADRMLDMGFEPQIRKIVEQMDMPP 
Sbjct: 301 ERGCDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPR 360

Query: 361 GVRQTMLFSATFPREIQRLASDFLSSYIFLAVGRVGSSTDLIAQRVEFVHESDKRSHLLD 420
           GVRQTMLFSATFP +IQRLA+DF+S+YIFLAVGRVGSSTDLI QRVEFV ESDKRSHL+D
Sbjct: 361 GVRQTMLFSATFPSQIQRLAADFMSNYIFLAVGRVGSSTDLITQRVEFVQESDKRSHLMD 420

Query: 421 LLHAQRANGVQGKQSLTLVFVETKKGADALENWLCHNGFPATTIHGDRTQQEREHALRSF 480
           LLHAQR    Q KQSLTLVFVETK+GAD LENWLC N FPAT+IHGDRTQQERE ALRSF
Sbjct: 421 LLHAQRE--TQDKQSLTLVFVETKRGADTLENWLCMNEFPATSIHGDRTQQEREVALRSF 480

Query: 481 RSGNTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTXXXXXTGVATAFFNE 540
           ++G TPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIG  XXXXX G+ATAFFNE
Sbjct: 481 KTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGXXXXXXXXGIATAFFNE 540

Query: 541 NNSSIARSLAELMQESNQEVPDWLSRFAARSSYSG 557
           NN+ +ARSLAELMQE+NQEVP+WL+R+A+R+S+ G
Sbjct: 541 NNAQLARSLAELMQEANQEVPEWLTRYASRASFGG 549

[Close]

BLAST of Carg02752 vs. Swiss-Prot
Match: sp|Q2R1M8|RH52C_ORYSJ (DEAD-box ATP-dependent RNA helicase 52C OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0599500 PE=3 SV=1)

HSP 1 Score: 727.6 bits (1877), Expect = 1.1e-208
Identity = 410/561 (73.08%), Postives = 443/561 (78.97%), Query Frame = 0


Query: 2   RTSWADLAASPAAENVAAGSXXXXXXXXTTSAPGRSAYVPPHLRNRPASSDPPAAANSGP 61
           RTSWAD+A                      + P RS+YVPPHLRNR              
Sbjct: 6   RTSWADVADXXXXXXXXXXXNG-------PARPDRSSYVPPHLRNR----XXXXXXXXXX 65

Query: 62  AVGNDRSGHVGSRWPGPKNDYNRSGYGGGSXXXXXXXXXXXXXXXXXDREMNPFEDEDDT 121
                                         XXXXXXXXXXXXX    DRE NPF ++ D 
Sbjct: 66  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRRWDREPNPFGNDGDA 125

Query: 122 EQAFGEQ-------ENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEALNHNIRRCK 181
               G++       +NTGINFDAYEDIPVETSG  VPPPV TFAEIDLG+ALN NIRRCK
Sbjct: 126 AAGAGDEPEVFDAHQNTGINFDAYEDIPVETSGREVPPPVGTFAEIDLGQALNDNIRRCK 185

Query: 182 YVKPTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMKGQSVQRPARGA-RTV 241
           YV+PTPVQR+AIPISLAGRDLMACAQTGSGKTAAFCFPIISGIM+G   QRP RG  RT 
Sbjct: 186 YVRPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMRGPPAQRPQRGGMRTA 245

Query: 242 YPLALILSPTRELSMQIHEEARKFSYQTSVRVVVAYGGAPINQQLRELERGVDILVATPG 301
            PLALILSPTRELSMQIHEEARKFSYQT VRVVVAYGGAPINQQLR+LERGVDILVATPG
Sbjct: 246 CPLALILSPTRELSMQIHEEARKFSYQTGVRVVVAYGGAPINQQLRDLERGVDILVATPG 305

Query: 302 RLVDLLERAKVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGVRQTMLFSATF 361
           RLVDLLERA+VSLQ IRYLALDEADRMLDMGFEPQ+R+IVEQMDMPPPG RQTMLFSATF
Sbjct: 306 RLVDLLERARVSLQSIRYLALDEADRMLDMGFEPQVRRIVEQMDMPPPGARQTMLFSATF 365

Query: 362 PREIQRLASDFLSSYIFLAVGRVGSSTDLIAQRVEFVHESDKRSHLLDLLHAQRANGVQG 421
           P+EIQR+ASDFL +YIFLAVGRVGSSTDLI QRVEFV E+DKRSHL+DLLHAQR +   G
Sbjct: 366 PKEIQRMASDFLENYIFLAVGRVGSSTDLIVQRVEFVQEADKRSHLMDLLHAQRDSATPG 425

Query: 422 KQSLTLVFVETKKGADALENWLCHNGFPATTIHGDRTQQEREHALRSFRSGNTPILVATD 481
           K +LTLVFVETK+GAD+LE+WLC NGFPAT+IHGDR QQERE+ALRSF+SG+TPILVATD
Sbjct: 426 KPTLTLVFVETKRGADSLEHWLCMNGFPATSIHGDRNQQEREYALRSFKSGHTPILVATD 485

Query: 482 VAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTXXXXXTGVATAFFNENNSSIARSLAEL 541
           VAARGLDIPHVAHVVNFDLPNDIDDYVHRIG  XXXXX  +ATAFFNENNSS+ARSLAEL
Sbjct: 486 VAARGLDIPHVAHVVNFDLPNDIDDYVHRIGXXXXXXXXXLATAFFNENNSSMARSLAEL 545

Query: 542 MQESNQEVPDWLSRFAARSSY 555
           MQESNQEVP WLSR+AAR SY
Sbjct: 546 MQESNQEVPAWLSRYAARPSY 555

[Close]

BLAST of Carg02752 vs. Swiss-Prot
Match: sp|Q6Z4K6|RH52B_ORYSJ (DEAD-box ATP-dependent RNA helicase 52B OS=Oryza sativa subsp. japonica OX=39947 GN=PL10B PE=2 SV=1)

HSP 1 Score: 725.3 bits (1871), Expect = 5.6e-208
Identity = 407/574 (70.91%), Postives = 456/574 (79.44%), Query Frame = 0


Query: 1   MRTSWADLAASPAAENVAAGSXXXXXXXXTTSAPGRSAYVPPHLRNRPASSD-------P 60
           MR+SWAD AA+      AA +          S   RS+YVPPHLR + A +        P
Sbjct: 1   MRSSWADSAANAEESAPAAAANHG------NSRLPRSSYVPPHLRGQAAPAAPAQAGALP 60

Query: 61  PAAANSGPAVGNDRSGHVGS-RWPGPKN---------------DYNRSGYGGGSXXXXXX 120
            AAA + P+VG  + G VG  RW G  N                          XXXXXX
Sbjct: 61  SAAAAAQPSVG--QPGVVGGPRWAGIVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXDREMNPFEDEDDTEQAFGEQENTGINFDAYEDIPVETSGENVPPPVNTF 180
                      DRE +PF + +  E  F E ENTGINF+AYEDIPVETSG +VPPP NTF
Sbjct: 121 WNSRPGGWDRRDREPDPFANSEAAEVDF-EGENTGINFEAYEDIPVETSGHDVPPPANTF 180

Query: 181 AEIDLGEALNHNIRRCKYVKPTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGI 240
           AEIDLG+ALN NIRRCKYVKPTPVQR+AIPIS+AGRDLMACAQTGSGKTAAFCFPIISGI
Sbjct: 181 AEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGRDLMACAQTGSGKTAAFCFPIISGI 240

Query: 241 MKGQSVQRPARGARTVYPLALILSPTRELSMQIHEEARKFSYQTSVRVVVAYGGAPINQQ 300
           M+ +   R +RG+RT YPLALILSPTRELS+QIHEEARKF+YQT V+VVVAYGGAPI QQ
Sbjct: 241 MRSRPPPR-SRGSRTAYPLALILSPTRELSVQIHEEARKFAYQTGVKVVVAYGGAPITQQ 300

Query: 301 LRELERGVDILVATPGRLVDLLERAKVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMD 360
           LRELERGV+ILVATPGRL+DLLERA+VSLQMI+YLALDEADRMLDMGFEPQIRKIVEQMD
Sbjct: 301 LRELERGVEILVATPGRLMDLLERARVSLQMIKYLALDEADRMLDMGFEPQIRKIVEQMD 360

Query: 361 MPPPGVRQTMLFSATFPREIQRLASDFLSSYIFLAVGRVGSSTDLIAQRVEFVHESDKRS 420
           MPP G RQTMLFSATFP+EIQR+ASDFL+ YIFLAVGRVGSSTDLI QRVEFV ++DKRS
Sbjct: 361 MPPRGERQTMLFSATFPKEIQRMASDFLADYIFLAVGRVGSSTDLIVQRVEFVLDADKRS 420

Query: 421 HLLDLLHAQRANGVQGKQSLTLVFVETKKGADALENWLCHNGFPATTIHGDRTQQEREHA 480
           +L+DLLHAQRANG  GKQ+LTLVFVETK+GADALENWL +NGFPAT+IHGDRTQQERE+A
Sbjct: 421 YLMDLLHAQRANGTHGKQALTLVFVETKRGADALENWLYNNGFPATSIHGDRTQQEREYA 480

Query: 481 LRSFRSGNTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTXXXXXTGVATA 540
           LRSF+SG TPILVATDVAARGLDIPHVAHV+NFDLPNDIDDYVHRIG  XXXXX  +ATA
Sbjct: 481 LRSFKSGATPILVATDVAARGLDIPHVAHVINFDLPNDIDDYVHRIGXXXXXXXXXLATA 540

Query: 541 FFNENNSSIARSLAELMQESNQEVPDWLSRFAAR 552
           FFNE+N+ +AR L+ELMQE+NQEVP WL R+AAR
Sbjct: 541 FFNESNTPLARPLSELMQEANQEVPQWLERYAAR 564

[Close]

BLAST of Carg02752 vs. TrEMBL
Match: tr|A0A067JSK3|A0A067JSK3_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_21034 PE=4 SV=1)

HSP 1 Score: 921.4 bits (2380), Expect = 1.1e-264
Identity = 500/579 (86.36%), Postives = 525/579 (90.67%), Query Frame = 0


Query: 2   RTSWADLAASPAAENVAAGSXXXXXXXXTTSA-PGRSAYVPPHLRNRPASSDPPAA-ANS 61
           RTSWADLAA+ AAEN +AG+        TTSA P R+ YVPPHLRNR  SSDPPAA   S
Sbjct: 4   RTSWADLAANSAAENTSAGASANNGNIGTTSAVPSRATYVPPHLRNRAPSSDPPAAPVYS 63

Query: 62  GPAVGNDRSGHVGSRWPGPKNDYNRSGYGGGSXXXXXXXXXXXXXXXXXDREMNPFEDED 121
           GPA  NDR GH GSRW GP+NDY RSGYGGG   XXXXXXXXXXXXXXX RE+NPF D+D
Sbjct: 64  GPASSNDRQGHSGSRWGGPRNDY-RSGYGGGG--XXXXXXXXXXXXXXXXREVNPFGDDD 123

Query: 122 DTEQAFGEQENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEALNHNIRRCKYVKPT 181
           DTEQ F EQENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEALN NIRRCKYVKPT
Sbjct: 124 DTEQDFSEQENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEALNQNIRRCKYVKPT 183

Query: 182 PVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMK--GQSVQRPARGARTVYPLA 241
           PVQRHAIPISL+GRDLMACAQTGSGKTAAFCFPIISGIMK  GQ  QRP RGARTVYPLA
Sbjct: 184 PVQRHAIPISLSGRDLMACAQTGSGKTAAFCFPIISGIMKMQGQCSQRPLRGARTVYPLA 243

Query: 242 LILSPTRELSMQIHEEARKFSYQTSVRVVVAYGGAPINQQLRELERGVDILVATPGRLVD 301
           LILSPTRELSMQIHEEARKFSYQT V+VVVAYGGAPINQQLRELERGVDILVATPGRLVD
Sbjct: 244 LILSPTRELSMQIHEEARKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVD 303

Query: 302 LLERAKVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGVRQTMLFSATFPREI 361
           LLERA+VSLQM++YLALDEADRMLDMGFEPQIRKIVEQ DMP PG RQTMLFSATFP+EI
Sbjct: 304 LLERARVSLQMVKYLALDEADRMLDMGFEPQIRKIVEQNDMPRPGARQTMLFSATFPKEI 363

Query: 362 QRLASDFLSSYIFLAVGRVGSSTDLIAQRVEFVHESDKRSHLLDLLHAQRANGVQGKQSL 421
           QRLASDFL +YIFLAVGRVGSSTDLI QRVEFVHESDKRSHL+DLLHAQRANGVQGKQ+L
Sbjct: 364 QRLASDFLFNYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQRANGVQGKQAL 423

Query: 422 TLVFVETKKGADALENWLCHNGFPATTIHGDRTQQEREHALRSFRSGNTPILVATDVAAR 481
           TLVFVETKKGAD+LE+WLC NGFPAT+IHGDRTQQERE ALRSFRSGNTPILVATDVAAR
Sbjct: 424 TLVFVETKKGADSLEHWLCINGFPATSIHGDRTQQEREQALRSFRSGNTPILVATDVAAR 483

Query: 482 GLDIPHVAHVVNFDLPNDIDDYVHRIGRTXXXXXTGVATAFFNENNSSIARSLAELMQES 541
           GLDIPHVAHVVNFDLPNDIDDYVHRIGRT XXX TG+ATAFFNE NSS+AR+LA+LMQES
Sbjct: 484 GLDIPHVAHVVNFDLPNDIDDYVHRIGRTGXXXKTGLATAFFNEGNSSLARALADLMQES 543

Query: 542 NQEVPDWLSRFAARSSYSGGRNRRSGGGRFVSRDYRRDS 577
           NQEVP WLSR+AARSSY GGRNRRSG  RF  RD+RRDS
Sbjct: 544 NQEVPAWLSRYAARSSYGGGRNRRSGXXRFGGRDFRRDS 579

[Close]

BLAST of Carg02752 vs. TrEMBL
Match: tr|A0A0A0L1R4|A0A0A0L1R4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G280530 PE=4 SV=1)

HSP 1 Score: 920.6 bits (2378), Expect = 1.8e-264
Identity = 513/565 (90.80%), Postives = 528/565 (93.45%), Query Frame = 0


Query: 1   MRTSWADLAASPAAENVAAGSXXXXXXXXTTSAPGRSAYVPPHLRNRPASSDPPAAANSG 60
           MRTSWADLAAS AAENV A  XXXXXXX TT+APGRSAYVPPHLRNR A +D PAAANSG
Sbjct: 1   MRTSWADLAASSAAENV-AXXXXXXXXXGTTTAPGRSAYVPPHLRNRTAPADLPAAANSG 60

Query: 61  PAVGNDRSGHVGSRW-PGPKNDY-NRSGYGG-GSXXXXXXXXXXXXXXXXXDREMNPFED 120
           PAVGNDRSGH GSRW  GP+NDY NRSGY G   XXXXXXXXXXXXXXXXX         
Sbjct: 61  PAVGNDRSGHAGSRWGGGPRNDYNNRSGYSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 EDDTEQAFGEQENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEALNHNIRRCKYVK 180
             DTE+AFGEQENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEALN NIRRCKYVK
Sbjct: 121 XXDTEEAFGEQENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEALNQNIRRCKYVK 180

Query: 181 PTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMKGQSVQRPARGARTVYPLA 240
           PTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMKGQS+ RPARGARTVYPLA
Sbjct: 181 PTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMKGQSMPRPARGARTVYPLA 240

Query: 241 LILSPTRELSMQIHEEARKFSYQTSVRVVVAYGGAPINQQLRELERGVDILVATPGRLVD 300
           LILSPTRELSMQIHEEARKFSYQT VRVVVAYGGAPIN QLR+LERGVDILVATPGRLVD
Sbjct: 241 LILSPTRELSMQIHEEARKFSYQTGVRVVVAYGGAPINLQLRDLERGVDILVATPGRLVD 300

Query: 301 LLERAKVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGVRQTMLFSATFPREI 360
           LLERAKVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGVRQTMLFSATFPREI
Sbjct: 301 LLERAKVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGVRQTMLFSATFPREI 360

Query: 361 QRLASDFLSSYIFLAVGRVGSSTDLIAQRVEFVHESDKRSHLLDLLHAQRANGVQGKQSL 420
           QRLASDFL  YIFLAVGRVGSSTDLIAQRVEFVHE+DKRSHLLDLLHAQRANGVQGKQSL
Sbjct: 361 QRLASDFLDKYIFLAVGRVGSSTDLIAQRVEFVHEADKRSHLLDLLHAQRANGVQGKQSL 420

Query: 421 TLVFVETKKGADALENWLCHNGFPATTIHGDRTQQEREHALRSFRSGNTPILVATDVAAR 480
           TLVFVETKKGADALE+WLC NGFPATTIHGDRTQQERE ALRSFRSGNTPILVATDVAAR
Sbjct: 421 TLVFVETKKGADALEHWLCLNGFPATTIHGDRTQQEREQALRSFRSGNTPILVATDVAAR 480

Query: 481 GLDIPHVAHVVNFDLPNDIDDYVHRIGRTXXXXXTGVATAFFNENNSSIARSLAELMQES 540
           GLDIPHVAHVVNFDLPNDIDDYVHRIGRTXXXXXTG+ATAFFNENN+S+ARSLA+LM ES
Sbjct: 481 GLDIPHVAHVVNFDLPNDIDDYVHRIGRTXXXXXTGLATAFFNENNASLARSLADLMSES 540

Query: 541 NQEVPDWLSRFAARSSYSGGRNRRS 563
           NQEVP+WL RFAARS+Y+GGRNRRS
Sbjct: 541 NQEVPEWLIRFAARSAYTGGRNRRS 564

[Close]

BLAST of Carg02752 vs. TrEMBL
Match: tr|A0A061GT54|A0A061GT54_THECC (Dead box ATP-dependent RNA helicase, putative isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_040183 PE=4 SV=1)

HSP 1 Score: 910.6 bits (2352), Expect = 1.9e-261
Identity = 498/591 (84.26%), Postives = 533/591 (90.19%), Query Frame = 0


Query: 2   RTSWADLAASPAAENVAAGS-XXXXXXXXTTSAPGRSAYVPPHLRNRPASSDPPAAANSG 61
           RTSWADLAA+ AAENV  GS XXXXXXXX     GR  YVPPHLRNRP+SSDPPA  ++G
Sbjct: 4   RTSWADLAANSAAENVGVGSXXXXXXXXXXXXXXGRPVYVPPHLRNRPSSSDPPAPTSTG 63

Query: 62  PAVGNDRSGHVGSRWPGPKND-YNRSGY----GGGSXXXXXXXXXXXXXXXXXDREMNPF 121
            A  NDR G+ GSRW  P+ D YNRSGY        XXXXXXXXXXXXXX   DRE+NPF
Sbjct: 64  AASSNDRPGYGGSRWAAPRTDYYNRSGYXXXXXXXXXXXXXXXXXXXXXXRGRDREVNPF 123

Query: 122 EDEDDTEQAFGEQENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEALNHNIRRCKY 181
            ++DDTEQ F EQENTGINFDAYEDIPVETSG+NVPPPVNTFAEIDLGEALN NIRRCKY
Sbjct: 124 GNDDDTEQVFSEQENTGINFDAYEDIPVETSGDNVPPPVNTFAEIDLGEALNLNIRRCKY 183

Query: 182 VKPTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMKGQSVQRPARGARTVYP 241
           VKPTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIM+GQ  QRP RGARTVYP
Sbjct: 184 VKPTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMRGQVPQRPLRGARTVYP 243

Query: 242 LALILSPTRELSMQIHEEARKFSYQTSVRVVVAYGGAPINQQLRELERGVDILVATPGRL 301
           LALILSPTRELSMQIHEEA+KFSYQT V+VVVAYGGAPINQQLRELERGVDILVATPGRL
Sbjct: 244 LALILSPTRELSMQIHEEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRL 303

Query: 302 VDLLERAKVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGVRQTMLFSATFPR 361
           VDLLERA+VSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGVRQTMLFSATFP+
Sbjct: 304 VDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGVRQTMLFSATFPK 363

Query: 362 EIQRLASDFLSSYIFLAVGRVGSSTDLIAQRVEFVHESDKRSHLLDLLHAQRANGVQGKQ 421
           EIQRLA DFL++Y+FLAVGRVGSSTDLI QRVEFVHESDKRSHL+DLLHAQRANGVQGKQ
Sbjct: 364 EIQRLACDFLANYVFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQRANGVQGKQ 423

Query: 422 SLTLVFVETKKGADALENWLCHNGFPATTIHGDRTQQEREHALRSFRSGNTPILVATDVA 481
           +LTLVFVETKKGAD+LE+WLC NGFPATTIHGDR+QQERE ALRSF+SG TPILVATDVA
Sbjct: 424 ALTLVFVETKKGADSLEHWLCMNGFPATTIHGDRSQQEREQALRSFKSGATPILVATDVA 483

Query: 482 ARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTXXXXXTGVATAFFNENNSSIARSLAELMQ 541
           ARGLDIPHVAHVVNFDLPNDIDDYVHRIGRT XXX TG+ATAFFN+NN+S+AR LA+LMQ
Sbjct: 484 ARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGXXXKTGLATAFFNDNNASLARPLADLMQ 543

Query: 542 ESNQEVPDWLSRFAARSSYSGGRNRRSGGGRFVSRDYRRDSTFNRGGSDYH 587
           E+NQEVP WL+R+AARS   GGRNRR GGGRF  RD+RRDS+FNRG  DY+
Sbjct: 544 EANQEVPAWLTRYAARS--FGGRNRRPGGGRFGGRDFRRDSSFNRGNLDYY 592

[Close]

BLAST of Carg02752 vs. TrEMBL
Match: tr|A0A1S3BM96|A0A1S3BM96_CUCME (DEAD-box ATP-dependent RNA helicase 37-like OS=Cucumis melo OX=3656 GN=LOC103491582 PE=4 SV=1)

HSP 1 Score: 906.0 bits (2340), Expect = 4.7e-260
Identity = 505/559 (90.34%), Postives = 517/559 (92.49%), Query Frame = 0


Query: 1   MRTSWADLAASPAAENVAAGSXXXXXXXXTTSAPGRSAYVPPHLRNRPASSDPPAAANSG 60
           MRTSWADLAAS AAENV    XXXXXXXXTT+APGRSAYVPPHLRNR A SD PAAANSG
Sbjct: 1   MRTSWADLAASSAAENV-XXXXXXXXXXXTTTAPGRSAYVPPHLRNRTAPSDLPAAANSG 60

Query: 61  PAVGNDRSGHVGSRW-PGPKNDY-NRSGYGG-GSXXXXXXXXXXXXXXXXXDREMNPFED 120
           PAVGNDRSGH GSRW  GP+NDY NRSGY G   XXXXXXXXXXXXXXXXX         
Sbjct: 61  PAVGNDRSGHAGSRWGGGPRNDYNNRSGYSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 EDDTEQAFGEQENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEALNHNIRRCKYVK 180
             DTE+AFGEQENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLG+ALN NIRRCKYVK
Sbjct: 121 XXDTEEAFGEQENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGDALNQNIRRCKYVK 180

Query: 181 PTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMKGQSVQRPARGARTVYPLA 240
           PTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMKGQS+ RPARGARTVYPLA
Sbjct: 181 PTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMKGQSMPRPARGARTVYPLA 240

Query: 241 LILSPTRELSMQIHEEARKFSYQTSVRVVVAYGGAPINQQLRELERGVDILVATPGRLVD 300
           LILSPTRELSMQIHEEARKFSYQT VRVVVAYGGAPIN QLR+LERGVDILVATPGRLVD
Sbjct: 241 LILSPTRELSMQIHEEARKFSYQTGVRVVVAYGGAPINLQLRDLERGVDILVATPGRLVD 300

Query: 301 LLERAKVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGVRQTMLFSATFPREI 360
           LLERAKVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGVRQTMLFSATFPREI
Sbjct: 301 LLERAKVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGVRQTMLFSATFPREI 360

Query: 361 QRLASDFLSSYIFLAVGRVGSSTDLIAQRVEFVHESDKRSHLLDLLHAQRANGVQGKQSL 420
           QRLASDFL  YIFLAVGRVGSSTDLIAQRVE+VHE DKRSHLLDLLHAQRANGVQGKQSL
Sbjct: 361 QRLASDFLDKYIFLAVGRVGSSTDLIAQRVEYVHEPDKRSHLLDLLHAQRANGVQGKQSL 420

Query: 421 TLVFVETKKGADALENWLCHNGFPATTIHGDRTQQEREHALRSFRSGNTPILVATDVAAR 480
           TLVFVETKKGADALE+WLC NGFPATTIHGDRTQQERE ALRSFRSGNTPILVATDVAAR
Sbjct: 421 TLVFVETKKGADALEHWLCLNGFPATTIHGDRTQQEREQALRSFRSGNTPILVATDVAAR 480

Query: 481 GLDIPHVAHVVNFDLPNDIDDYVHRIGRTXXXXXTGVATAFFNENNSSIARSLAELMQES 540
           GLDIPHVAHVVNFDLPNDIDDYVHRIGRT XXX TG+ATAFFNENN S+ARSLA+LM ES
Sbjct: 481 GLDIPHVAHVVNFDLPNDIDDYVHRIGRTGXXXKTGLATAFFNENNMSLARSLADLMTES 540

Query: 541 NQEVPDWLSRFAARSSYSG 557
           NQEVPDWL RF ARS+YSG
Sbjct: 541 NQEVPDWLIRFGARSAYSG 558

[Close]

BLAST of Carg02752 vs. TrEMBL
Match: tr|A0A1S3USU2|A0A1S3USU2_VIGRR (DEAD-box ATP-dependent RNA helicase 37-like OS=Vigna radiata var. radiata OX=3916 GN=LOC106768486 PE=4 SV=1)

HSP 1 Score: 906.0 bits (2340), Expect = 4.7e-260
Identity = 506/626 (80.83%), Postives = 546/626 (87.22%), Query Frame = 0


Query: 1   MRTSWADLAASPAAENVAAGSXXXXXXXXTTSAPGRSAYVPPHLRNRPASSDPPAAAN-- 60
           MRTSWADLAA+ AAEN             +T AP R  YVPPHLRNR  S+         
Sbjct: 1   MRTSWADLAANSAAENSGPAFSANNAGTGSTVAPSRPVYVPPHLRNRQPSAXXXXXXXXX 60

Query: 61  -----SGPAVGNDRSGHVGSRWPGPKNDYNRSGYGGGSXXXXXXXXXXXXXXXXXDREMN 120
                S  +VG+  +G+ GSRWP P+ND+ RSGYGGG      XXXXXXXXXXX  RE+N
Sbjct: 61  XXXXPSSGSVGSSAAGNSGSRWPAPRNDH-RSGYGGGG--GRPXXXXXXXXXXXRGREVN 120

Query: 121 PFEDEDDTEQAFGEQENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEALNHNIRRC 180
           PFE+ED+ E+AF EQENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLG+ALN NIRRC
Sbjct: 121 PFEEEDNAEEAFNEQENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGDALNQNIRRC 180

Query: 181 KYVKPTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMKGQSVQRPARGARTV 240
           KYVKPTPVQRHAIPISL GRDLMACAQTGSGKTAAFCFPIISGIM+GQ VQRP RG RTV
Sbjct: 181 KYVKPTPVQRHAIPISLGGRDLMACAQTGSGKTAAFCFPIISGIMRGQPVQRPPRGVRTV 240

Query: 241 YPLALILSPTRELSMQIHEEARKFSYQTSVRVVVAYGGAPINQQLRELERGVDILVATPG 300
           YPLAL+LSPTRELSMQIHEEARKFS+QT V+VVVAYGGAPINQQLR+LERGVDILVATPG
Sbjct: 241 YPLALVLSPTRELSMQIHEEARKFSFQTGVKVVVAYGGAPINQQLRDLERGVDILVATPG 300

Query: 301 RLVDLLERAKVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGVRQTMLFSATF 360
           RLVDLLERA+VSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGVRQTMLFSATF
Sbjct: 301 RLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGVRQTMLFSATF 360

Query: 361 PREIQRLASDFLSSYIFLAVGRVGSSTDLIAQRVEFVHESDKRSHLLDLLHAQRANGVQG 420
           P+EIQRLASDFLS+YIFLAVGRVGSSTDLI QRVE+V ESDKRSHL+DLLHAQRANGVQG
Sbjct: 361 PKEIQRLASDFLSNYIFLAVGRVGSSTDLIVQRVEYVQESDKRSHLMDLLHAQRANGVQG 420

Query: 421 KQSLTLVFVETKKGADALENWLCHNGFPATTIHGDRTQQEREHALRSFRSGNTPILVATD 480
           KQ+LTLVFVETKKGAD+LE+WLC NGFPATTIHGDR+QQERE ALRSF+SGNTPILVATD
Sbjct: 421 KQALTLVFVETKKGADSLEHWLCLNGFPATTIHGDRSQQERELALRSFKSGNTPILVATD 480

Query: 481 VAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTXXXXXTGVATAFFNENNSSIARSLAEL 540
           VAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRT      G+ATAFFN+NNSS+AR+LA+L
Sbjct: 481 VAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKKGLATAFFNDNNSSLARALADL 540

Query: 541 MQESNQEVPDWLSRFAARSSYSGGRNRRSGGGRFVSRDYRRDSTFNRGGSDYHSGGNTXX 600
           MQE+NQEVP WLSR+AAR SY GGRNRRS GGRF SRD+RR+ +FNRG SDY+S GN   
Sbjct: 541 MQEANQEVPAWLSRYAAR-SYGGGRNRRS-GGRFGSRDFRREGSFNRGSSDYYSAGN--- 600

Query: 601 XXXXXXXXXXXXXXXXXXXGVTSAWD 620
             XXXXXXXXXXXXXXXXXGVTSAWD
Sbjct: 601 --XXXXXXXXXXXXXXXXXGVTSAWD 616

The following BLAST results are available for this feature:

BLAST of Carg02752 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022995615.1	0.0e+00	97.58	DEAD-box ATP-dependent RNA helicase 37-like [Cucurbita maxima]	[more]
XP_023533696.1	0.0e+00	98.38	DEAD-box ATP-dependent RNA helicase 37-like [Cucurbita pepo subsp. pepo]	[more]
XP_022958617.1	1.3e-309	99.83	DEAD-box ATP-dependent RNA helicase 37-like [Cucurbita moschata]	[more]
XP_022153767.1	1.0e-290	92.37	DEAD-box ATP-dependent RNA helicase 37-like [Momordica charantia] >XP_022153768....	[more]
XP_022943844.1	1.1e-276	93.54	DEAD-box ATP-dependent RNA helicase 37-like isoform X1 [Cucurbita moschata]	[more]

BLAST of Carg02752 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G42520.1	8.2e-226	75.69	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT3G58570.1	4.5e-224	74.35	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT3G58510.1	3.3e-211	72.00	DEA(D/H)-box RNA helicase family protein	[more]
AT5G63120.2	8.2e-93	45.19	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT3G01540.2	1.6e-88	43.06	DEAD box RNA helicase 1	[more]

BLAST of Carg02752 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q84W89\|RH37_ARATH	1.5e-224	75.69	DEAD-box ATP-dependent RNA helicase 37 OS=Arabidopsis thaliana OX=3702 GN=RH37 P...	[more]
sp\|Q9M2F9\|RH52_ARATH	8.1e-223	74.35	DEAD-box ATP-dependent RNA helicase 52 OS=Arabidopsis thaliana OX=3702 GN=RH52 P...	[more]
sp\|Q8LA13\|RH11_ARATH	6.0e-210	72.00	DEAD-box ATP-dependent RNA helicase 11 OS=Arabidopsis thaliana OX=3702 GN=RH11 P...	[more]
sp\|Q2R1M8\|RH52C_ORYSJ	1.1e-208	73.08	DEAD-box ATP-dependent RNA helicase 52C OS=Oryza sativa subsp. japonica OX=39947...	[more]
sp\|Q6Z4K6\|RH52B_ORYSJ	5.6e-208	70.91	DEAD-box ATP-dependent RNA helicase 52B OS=Oryza sativa subsp. japonica OX=39947...	[more]

BLAST of Carg02752 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A067JSK3\|A0A067JSK3_JATCU	1.1e-264	86.36	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_21034 PE=4 SV=1	[more]
tr\|A0A0A0L1R4\|A0A0A0L1R4_CUCSA	1.8e-264	90.80	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G280530 PE=4 SV=1	[more]
tr\|A0A061GT54\|A0A061GT54_THECC	1.9e-261	84.26	Dead box ATP-dependent RNA helicase, putative isoform 1 OS=Theobroma cacao OX=36...	[more]
tr\|A0A1S3BM96\|A0A1S3BM96_CUCME	4.7e-260	90.34	DEAD-box ATP-dependent RNA helicase 37-like OS=Cucumis melo OX=3656 GN=LOC103491...	[more]
tr\|A0A1S3USU2\|A0A1S3USU2_VIGRR	4.7e-260	80.83	DEAD-box ATP-dependent RNA helicase 37-like OS=Vigna radiata var. radiata OX=391...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0005524	ATP binding

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR014014	RNA_helicase_DEAD_Q_motif
IPR011545	DEAD/DEAH_box_helicase_dom
IPR014001	Helicase_ATP-bd
IPR001650	Helicase_C

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg02752-RA	Carg02752-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 429..510 e-value: 5.1E-36 score: 135.7
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 395..510 e-value: 6.6E-31 score: 106.9
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 382..549 score: 23.43
IPR001650	Helicase, C-terminal	CDD	cd00079	HELICc	coord: 383..515 e-value: 2.4206E-41 score: 145.458
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 174..386 e-value: 2.6E-60 score: 216.3
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 186..371 score: 29.17
None	No IPR available	GENE3D	G3DSA:3.40.50.300		coord: 374..554 e-value: 4.2E-59 score: 200.8
None	No IPR available	GENE3D	G3DSA:3.40.50.300		coord: 110..373 e-value: 3.2E-86 score: 290.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 564..580
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 554..606
None	No IPR available	PANTHER	PTHR24031:SF363	SUBFAMILY NOT NAMED	coord: 77..612
None	No IPR available	PANTHER	PTHR24031	RNA HELICASE	coord: 77..612
None	No IPR available	CDD	cd00268	DEADc	coord: 157..372 e-value: 4.61293E-93 score: 286.688
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 179..360 e-value: 2.1E-50 score: 170.8
IPR014014	RNA helicase, DEAD-box type, Q motif	PROSITE	PS51195	Q_MOTIF	coord: 155..183 score: 9.817
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 236..526

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg02752	Cla003171	Watermelon (97103) v1	carwmB0928
Carg02752	Csa4G280530	Cucumber (Chinese Long) v2	carcuB0935
Carg02752	MELO3C014675	Melon (DHL92) v3.5.1	carmeB0910
Carg02752	ClCG02G023950	Watermelon (Charleston Gray)	carwcgB0900
Carg02752	CSPI04G13050	Wild cucumber (PI 183967)	carcpiB0958
Carg02752	Cucsa.153230	Cucumber (Gy14) v1	carcgyB1040
Carg02752	CmaCh02G012040	Cucurbita maxima (Rimu)	carcmaB1268
Carg02752	CmaCh20G000350	Cucurbita maxima (Rimu)	carcmaB1267
Carg02752	CmoCh02G012390	Cucurbita moschata (Rifu)	carcmoB1237
Carg02752	CmoCh20G000360	Cucurbita moschata (Rifu)	carcmoB1236
Carg02752	Lsi10G009730	Bottle gourd (USVL1VR-Ls)	carlsiB838
Carg02752	Cp4.1LG16g09380	Cucurbita pepo (Zucchini)	carcpeB1273
Carg02752	Cp4.1LG05g05350	Cucurbita pepo (Zucchini)	carcpeB1283
Carg02752	CsGy4G012610	Cucumber (Gy14) v2	carcgybB0909
Carg02752	CsaV3_4G023400	Cucumber (Chinese Long) v3	carcucB0960
Carg02752	Cla97C02G050120	Watermelon (97103) v2	carwmbB0966
Carg02752	Bhi10G000343	Wax gourd	carwgoB1067

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg02752	Carg06945	Silver-seed gourd	carcarB498

The following block(s) are covering this gene:


Gene	Organism	Block
Carg02752	Cucurbita maxima (Rimu)	carcmaB1258
Carg02752	Cucurbita moschata (Rifu)	carcmoB1227
Carg02752	Cucurbita pepo (Zucchini)	carcpeB1276
Carg02752	Wild cucumber (PI 183967)	carcpiB0954
Carg02752	Cucumber (Chinese Long) v2	carcuB0932
Carg02752	Cucumber (Chinese Long) v3	carcucB0955
Carg02752	Melon (DHL92) v3.6.1	carmedB0917
Carg02752	Silver-seed gourd	carcarB464
Carg02752	Cucumber (Gy14) v2	carcgybB0905
Carg02752	Cucumber (Gy14) v1	carcgyB1039