Carg02587 (gene) Silver-seed gourd

NameCarg02587
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_009 : 761120 .. 761780 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
GGTCGGAATAAGCAAGCCGCAGAGTTCGAAGAGCTCAATTCAAGGAAAAATGAACCCACGGCGACGATTGAAGAGATAACAATTACAGTCCGATCAGAACCCAAAACTCTTATCGCCAATTCACAGTTCTTCCGGCCGCCCTGTCCAACATATATGTGCGCAGGCAGGTATGTTTCACGAGCACAAGTTCTTGTTCTTATGCCGCTAATATATATTCCTAGGAGATGGATTTTCTGAATCAATGCTCGAGGAACGTTGTACTAAACTCCGCTCTAATTATTCCTAAACCGAAAGTCAGTGTTTCAATTCCTATTCATGATGCGAACAATGGGATTCCCCGTGTATGCTTTAGTCCCATGGATTTTTCAATACTGTTCTTGCAAAGCTTCTAACATTCACACATTCCTTTTTCAAATTAGGTTGCCGACGTGTAGAATGCTGAGAAACACAACCATCAAAACAATCAAGATAGCAATAAAAACGGCTGAGGATTGAAGTTGTAACTCATTCCAAATATGTTGCACCCTGGATTTTTCTACTGATGACAAATTACTATATCTGGTGTTATAGTGCACATGTCTTGTCGGCTTGGGATTGGGGTTATGTTTCAGGTTCAACCTATCAGAATTTAGCTGATCTCTATGTTCCTTGCAATGCATAG

mRNA sequence

GGTCGGAATAAGCAAGCCGCAGAGTTCGAAGAGCTCAATTCAAGGAAAAATGAACCCACGGCGACGATTGAAGAGATAACAATTACAGTCCGATCAGAACCCAAAACTCTTATCGCCAATTCACAGTTCTTCCGGCCGCCCTGTCCAACATATATGTGCGCAGGCAGTGCACATGTCTTGTCGGCTTGGGATTGGGGTTATGTTTCAGGTTCAACCTATCAGAATTTAGCTGATCTCTATGTTCCTTGCAATGCATAG

Coding sequence (CDS)

GGTCGGAATAAGCAAGCCGCAGAGTTCGAAGAGCTCAATTCAAGGAAAAATGAACCCACGGCGACGATTGAAGAGATAACAATTACAGTCCGATCAGAACCCAAAACTCTTATCGCCAATTCACAGTTCTTCCGGCCGCCCTGTCCAACATATATGTGCGCAGGCAGTGCACATGTCTTGTCGGCTTGGGATTGGGGTTATGTTTCAGGTTCAACCTATCAGAATTTAGCTGATCTCTATGTTCCTTGCAATGCATAG

Protein sequence

GRNKQAAEFEELNSRKNEPTATIEEITITVRSEPKTLIANSQFFRPPCPTYMCAGSAHVLSAWDWGYVSGSTYQNLADLYVPCNA
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg02587-RACarg02587-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..18

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg02587Silver-seed gourdcarcarB198
Carg02587Silver-seed gourdcarcarB295
Carg02587Silver-seed gourdcarcarB366
Carg02587Cucumber (Gy14) v2carcgybB0915
Carg02587Cucumber (Gy14) v1carcgyB1046
Carg02587Cucurbita maxima (Rimu)carcmaB1260
Carg02587Cucurbita maxima (Rimu)carcmaB1266
Carg02587Cucurbita maxima (Rimu)carcmaB1268
Carg02587Cucurbita maxima (Rimu)carcmaB1271
Carg02587Cucurbita maxima (Rimu)carcmaB1272
Carg02587Cucurbita moschata (Rifu)carcmoB1235
Carg02587Cucurbita moschata (Rifu)carcmoB1237
Carg02587Cucurbita moschata (Rifu)carcmoB1241
Carg02587Cucurbita pepo (Zucchini)carcpeB1274
Carg02587Cucurbita pepo (Zucchini)carcpeB1278
Carg02587Cucurbita pepo (Zucchini)carcpeB1279
Carg02587Cucurbita pepo (Zucchini)carcpeB1282
Carg02587Cucurbita pepo (Zucchini)carcpeB1285
Carg02587Wild cucumber (PI 183967)carcpiB0957
Carg02587Wild cucumber (PI 183967)carcpiB0964
Carg02587Cucumber (Chinese Long) v2carcuB0942
Carg02587Cucumber (Chinese Long) v3carcucB0958
Carg02587Cucumber (Chinese Long) v3carcucB0966
Carg02587Bottle gourd (USVL1VR-Ls)carlsiB838
Carg02587Bottle gourd (USVL1VR-Ls)carlsiB840
Carg02587Melon (DHL92) v3.5.1carmeB0906
Carg02587Melon (DHL92) v3.5.1carmeB0909
Carg02587Melon (DHL92) v3.6.1carmedB0913
Carg02587Melon (DHL92) v3.6.1carmedB0916
Carg02587Watermelon (Charleston Gray)carwcgB0900
Carg02587Watermelon (97103) v1carwmB0927
Carg02587Watermelon (97103) v1carwmB0928
Carg02587Watermelon (97103) v2carwmbB0965
Carg02587Watermelon (97103) v2carwmbB0966
Carg02587Wax gourdcarwgoB1068