Carg02537 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTTCCTTAATCCATTGGATCCATGATGCTCTTTATTTTATGATGCATTGTCTGCTTTAAATCATTAATCTAGTGTTGCTTTGATTTCTACGTTTTCCCCCATTTTTATATCCAATCCTGAGCTCTGTTGCTGTTTTGGGTGTACTCGAAACAGAGCGAAGCCACCCATTTGTTTTTTTCTCCTTTCTGGGGTTTCGAGATTTCTGATGCAGAGAAAGAAGAAGACCCATCACTGTTTTTGAACTTCTTTTTTGCTGAGAACATCAGAATCTATGGATATACAGAAGCATTTTCATGGTGGGTTTTCCTTATTCTCTCTGGTTTTGCTGCTGATTTTTCCTTCTTACGTGTTGGGTGGGGATATTGTTCATCATGACGATTTGTCTCCCAAAAAGCCTGGCTGTGAGAACGACTTCATTCTGGTAATATATCCAATGCCTGTTTCTTGTTTCGGCTTCATAATTTTACTGGGTTTTCTTGAAATTTGTTTACATTTTGATTGGGTTTCACCAATTAGGTTAAAGTTCAAACTTGGATCGATGGCATAGAAGCCAGTGAATTTGTGGGTGTTGGAGCTAGATTTGGTGCTACCATCGTTTCAAAGGAGAAAAATGCAAACCAAACACGCCTTGTTCTTGCAAATCCCCGTGATTGTTGCAGTGTGCCAAAGGACAAGGTTCTTCATTTTCTGATTATAATGTTCTTCCTTCCTCTAGTGGCATGA TTTCCTTAATCCATTGGATCCATGATGCTCTTTATTTTATGATGCATTGTCTGCTTTAAATCATTAATCTAGTGTTGCTTTGATTTCTACGTTTTCCCCCATTTTTATATCCAATCCTGAGCTCTGTTGCTGTTTTGGGTGTACTCGAAACAGAGCGAAGCCACCCATTTGTTTTTTTCTCCTTTCTGGGGTTTCGAGATTTCTGATGCAGAGAAAGAAGAAGACCCATCACTGTTTTTGAACTTCTTTTTTGCTGAGAACATCAGAATCTATGGATATACAGAAGCATTTTCATGGTGGGTTTTCCTTATTCTCTCTGGTTTTGCTGCTGATTTTTCCTTCTTACGTGTTGGGTGGGGATATTGTTCATCATGACGATTTGTCTCCCAAAAAGCCTGGCTGTGAGAACGACTTCATTCTGGTTAAAGTTCAAACTTGGATCGATGGCATAGAAGCCAGTGAATTTGTGGGTGTTGGAGCTAGATTTGGTGCTACCATCGTTTCAAAGGAGAAAAATGCAAACCAAACACGCCTTGTTCTTGCAAATCCCCGTGATTGTTGCAGTGTGCCAAAGGACAAGGTTCTTCATTTTCTGATTATAATGTTCTTCCTTCCTCTAGTGGCATGA ATGGATATACAGAAGCATTTTCATGGTGGGTTTTCCTTATTCTCTCTGGTTTTGCTGCTGATTTTTCCTTCTTACGTGTTGGGTGGGGATATTGTTCATCATGACGATTTGTCTCCCAAAAAGCCTGGCTGTGAGAACGACTTCATTCTGGTTAAAGTTCAAACTTGGATCGATGGCATAGAAGCCAGTGAATTTGTGGGTGTTGGAGCTAGATTTGGTGCTACCATCGTTTCAAAGGAGAAAAATGCAAACCAAACACGCCTTGTTCTTGCAAATCCCCGTGATTGTTGCAGTGTGCCAAAGGACAAGGTTCTTCATTTTCTGATTATAATGTTCTTCCTTCCTCTAGTGGCATGA MDIQKHFHGGFSLFSLVLLLIFPSYVLGGDIVHHDDLSPKKPGCENDFILVKVQTWIDGIEASEFVGVGARFGATIVSKEKNANQTRLVLANPRDCCSVPKDKVLHFLIIMFFLPLVA
BLAST of Carg02537 vs. NCBI nr
Match: XP_022957950.1 (signal peptide peptidase-like 2 [Cucurbita moschata]) HSP 1 Score: 216.9 bits (551), Expect = 3.8e-53 Identity = 103/111 (92.79%), Postives = 108/111 (97.30%), Query Frame = 0
BLAST of Carg02537 vs. NCBI nr
Match: XP_022995490.1 (signal peptide peptidase-like 2 [Cucurbita maxima]) HSP 1 Score: 216.5 bits (550), Expect = 5.0e-53 Identity = 102/111 (91.89%), Postives = 108/111 (97.30%), Query Frame = 0
BLAST of Carg02537 vs. NCBI nr
Match: XP_023534333.1 (signal peptide peptidase-like 2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 213.8 bits (543), Expect = 3.2e-52 Identity = 102/111 (91.89%), Postives = 107/111 (96.40%), Query Frame = 0
BLAST of Carg02537 vs. NCBI nr
Match: XP_016898821.1 (PREDICTED: signal peptide peptidase-like 2 isoform X1 [Cucumis melo] >XP_016898822.1 PREDICTED: signal peptide peptidase-like 2 isoform X1 [Cucumis melo]) HSP 1 Score: 194.9 bits (494), Expect = 1.5e-46 Identity = 91/107 (85.05%), Postives = 100/107 (93.46%), Query Frame = 0
BLAST of Carg02537 vs. NCBI nr
Match: XP_004143899.1 (PREDICTED: signal peptide peptidase-like 2 isoform X1 [Cucumis sativus] >KGN50088.1 hypothetical protein Csa_5G153030 [Cucumis sativus]) HSP 1 Score: 193.7 bits (491), Expect = 3.4e-46 Identity = 92/111 (82.88%), Postives = 102/111 (91.89%), Query Frame = 0
BLAST of Carg02537 vs. TAIR10
Match: AT1G63690.2 (SIGNAL PEPTIDE PEPTIDASE-LIKE 2) HSP 1 Score: 137.5 bits (345), Expect = 5.3e-33 Identity = 67/99 (67.68%), Postives = 78/99 (78.79%), Query Frame = 0
BLAST of Carg02537 vs. TAIR10
Match: AT1G01650.1 (SIGNAL PEPTIDE PEPTIDASE-LIKE 4) HSP 1 Score: 115.9 bits (289), Expect = 1.7e-26 Identity = 56/102 (54.90%), Postives = 75/102 (73.53%), Query Frame = 0
BLAST of Carg02537 vs. TAIR10
Match: AT2G43070.1 (SIGNAL PEPTIDE PEPTIDASE-LIKE 3) HSP 1 Score: 64.3 bits (155), Expect = 5.7e-11 Identity = 32/88 (36.36%), Postives = 46/88 (52.27%), Query Frame = 0
BLAST of Carg02537 vs. TAIR10
Match: AT1G05820.1 (SIGNAL PEPTIDE PEPTIDASE-LIKE 5) HSP 1 Score: 57.4 bits (137), Expect = 7.0e-09 Identity = 24/64 (37.50%), Postives = 36/64 (56.25%), Query Frame = 0
BLAST of Carg02537 vs. Swiss-Prot
Match: sp|Q8W469|SIPL2_ARATH (Signal peptide peptidase-like 2 OS=Arabidopsis thaliana OX=3702 GN=SPPL2 PE=2 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 9.6e-32 Identity = 67/99 (67.68%), Postives = 78/99 (78.79%), Query Frame = 0
BLAST of Carg02537 vs. Swiss-Prot
Match: sp|Q0DWA9|SIPL4_ORYSJ (Signal peptide peptidase-like 4 OS=Oryza sativa subsp. japonica OX=39947 GN=SPPL4 PE=2 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 6.0e-26 Identity = 54/89 (60.67%), Postives = 65/89 (73.03%), Query Frame = 0
BLAST of Carg02537 vs. Swiss-Prot
Match: sp|Q0WMJ8|SIPL4_ARATH (Signal peptide peptidase-like 4 OS=Arabidopsis thaliana OX=3702 GN=SPPL4 PE=2 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 3.0e-25 Identity = 56/102 (54.90%), Postives = 75/102 (73.53%), Query Frame = 0
BLAST of Carg02537 vs. Swiss-Prot
Match: sp|Q5Z413|SIPL5_ORYSJ (Signal peptide peptidase-like 5 OS=Oryza sativa subsp. japonica OX=39947 GN=SPPL5 PE=2 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 1.4e-22 Identity = 47/67 (70.15%), Postives = 58/67 (86.57%), Query Frame = 0
BLAST of Carg02537 vs. Swiss-Prot
Match: sp|Q53P98|SIPL2_ORYSJ (Signal peptide peptidase-like 2 OS=Oryza sativa subsp. japonica OX=39947 GN=SPPL2 PE=2 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 2.2e-12 Identity = 33/72 (45.83%), Postives = 45/72 (62.50%), Query Frame = 0
BLAST of Carg02537 vs. TrEMBL
Match: tr|A0A1S4DS57|A0A1S4DS57_CUCME (signal peptide peptidase-like 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482757 PE=4 SV=1) HSP 1 Score: 194.9 bits (494), Expect = 1.0e-46 Identity = 91/107 (85.05%), Postives = 100/107 (93.46%), Query Frame = 0
BLAST of Carg02537 vs. TrEMBL
Match: tr|A0A0A0KKI6|A0A0A0KKI6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G153030 PE=4 SV=1) HSP 1 Score: 193.7 bits (491), Expect = 2.3e-46 Identity = 92/111 (82.88%), Postives = 102/111 (91.89%), Query Frame = 0
BLAST of Carg02537 vs. TrEMBL
Match: tr|A0A1S3ATB4|A0A1S3ATB4_CUCME (signal peptide peptidase-like 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103482757 PE=4 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 2.5e-45 Identity = 90/111 (81.08%), Postives = 101/111 (90.99%), Query Frame = 0
BLAST of Carg02537 vs. TrEMBL
Match: tr|A0A2I0JCQ3|A0A2I0JCQ3_PUNGR (Uncharacterized protein (Fragment) OS=Punica granatum OX=22663 GN=CRG98_025623 PE=4 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 4.9e-33 Identity = 67/97 (69.07%), Postives = 85/97 (87.63%), Query Frame = 0
BLAST of Carg02537 vs. TrEMBL
Match: tr|A0A218WH95|A0A218WH95_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr017939 PE=4 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 4.9e-33 Identity = 67/97 (69.07%), Postives = 85/97 (87.63%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |