Carg02510 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCCTTCTGGAAACCACGTTTTCCTTTTTTTCTTCCCCCTCTCTTCCTTATCATTTACTCTCCTTACCCAGAAACTTCTAGAAACAACAAAACCTCTCTCTCTCTCTCTACGCGGCGGCTTTGCTGAGCTTCTGACGTTGCAGTGGCGGAGGTCATTCTTAGGGGCGGTGGTCTTCTTCACTCCTCCGATTCCGATTCCGATTCCGCTCCCGGTTTCTTCTTTTGCTGTTTGGTTCGAGGGGAGAATCTCGTCTGGTAATAGAATAGCTTCTAATTCGATCTTCTGTTGCTCTTTTGACGTGTATTTGTATGTTTCATTAGAACTCCAATTCTTTGTTTGTGAGATTAAGGCGAAATCGTTCCGTTTTATGATTTGGTAGATTTGGAGTTCGACAAAGTAATTGCTTCATTGCCCTAGCCTGAATTCGACTTTTTCTTCTTTGATTTTTGTTTTTCTATTTTCTGTTTTATTCCTTGAGCGTTTTGAGTGTTTCTTTTTTTAGGTTTCTAATCGGGAAGTTTAATTGATTAGATTGAGACGAAACCTCTCGATATTCGGAGATTCCTACGGTTCAGATCTGGAAGAAGCGGTGATGGCTCCGTCGCCTGCGGAGCCGATAGGCGATTCCGGAACCGGAGATTCTCAGAGATCTATTCCGACGCCGTTTCTAACAAAAACGTATCAACTCGTCGATGATCCGGATGTCGACGACCTCATCTCGTGGAACGAAGATGGATCTACCTTCATAGTCTGGCGACCTGCTGAATTCGCTCGAGATTTACTTCCTAAATACTTCAAACACAATAACTTTTCCAGTTTCGTCCGTCAACTTAACACTTATGTAAGTTTCTGCATCTTTCGACTGTTTGCCAAATTTCGAATCCGCTTTACTTTCTTTTTGGATTCACTATTTTTCTTGGAAAAACGGATGATGGTTCTGTTTTTTAGTACTTTTCGTCGTATATATCTTTAATTTCCAGAATTTTGTTTTTAATTTTATTTTTTCGTAACTACCACGCAGGGATTCCGGAAGGTTGTGCCGGATCGATGGGAATTTGCGAACGATTGTTTCAAGAGAGGTGAAAAAGCACTTCTACGAGACATCCAGCGGCGGAAGGTAGCAGTGTCGGTGGCGGCTCCGGCGACGCCGGCCTCCGTCTCTGTACCACTGGTGACAGTCGCAGCGTCTCCGGCTGTGGCGGCGTGCGTGATATCGCCGGTGAATTCTGCCGAAGAGCAGGTGACGTCCTCGAACTCATCGCCGATGGAATTCCAGCGAGGTACGAGTTGCTGCACTACACCAGAACTGGTGAGAGAGAACGAGCGGCTGAGGAAGGAGAACATGCAACTGAGTCACGAGTTGACTCAGTTGAAAGGGCTCTGCAACAACATACTATCGTTGATGACGAATTACGCTTCAGGTCACCAGCAGTTGGAGTCGGTGAGCGTCCGAGACGGGAAGGCGCTAGACCTCTTGCCAGCAAGGCAGATGATGGATGACGAAGGCGCCGTCAGCGACGGGATTCAGGAAGTGAGACTGAAGGTGGAGGAGGCGGTGGCGGTGGCGACGGCGGAGGGAAGGACGCCGAAGCTGTTCGGAGTTTCTATTGGAGTGAAGCGCGTGAGAAGAGAAGAAGAAGATGAAGAAATGGTGGGGCCGAATCACGTGCAGTCGGAAGAATGTGAGACCGGGTCGGAGATTAAAGCTGAGCCGTTGGATGAGAACTCTGAAAATCCAGAGGGATCCGCATCGCAATGGCTAGAACTCGGAAATCAAGGCTCCTAAATGGCGTCGTCAGAGATGACTGACAAAGAAGAAGAAGAAGACGACGACGACGACGACGTCGACGATAACGTTTTCTTCTAAAAAAAAGAATAAAGAGAGAATGCAGAGACAAGAGGAGACCAACCCGGCCCTAGAGAGAACGTAGAATCTCACGTGTCGAGCACGTGAGATAGAAAATACACGAACTGAAAATAAATATTTGTTTTTTGTTCGTGAAAGGGTTTCAGATCGGTTGATTGGTTGGTCCCTTGTAAAAGATGAAGCCGTGGAAAATCAACCGGCTGGGTCGGTTGGTGAAGGGGATGAAATGACGGAAAAACCAACCCAGGAAGAACGGCAATTGTGACTTTGTAATTTTAAGTTTCTAACCTCTCTTCCAATTTCTATCTTCAGAAATTTAATTTAAAGGCAAAAAAGGAAGGAAAAGAACAACTGTCGGTTGTGTGGTTCTTTTGTTTTCCGGTATCCGGTGGGCCGATTGGAATGTGAGGTGTAATTTGTATGGGCTTTTTACGAGCCCACTGTAATGTTCCTCTTCAATTTTGGGTTACTATCAATAACATGCTTGGATCTTAGTTAAACTTCAAAACAAAAACAAACTTATGTATTCTAGGGGCGGATGGGTGTAAGGATGCGTTCATGAAGCGCGGTGGCCCAGAGTCCAGACCATTGAGAGACACGGGCAAAGCCACC TTCCTTCTGGAAACCACGTTTTCCTTTTTTTCTTCCCCCTCTCTTCCTTATCATTTACTCTCCTTACCCAGAAACTTCTAGAAACAACAAAACCTCTCTCTCTCTCTCTACGCGGCGGCTTTGCTGAGCTTCTGACGTTGCAGTGGCGGAGGTCATTCTTAGGGGCGGTGGTCTTCTTCACTCCTCCGATTCCGATTCCGATTCCGCTCCCGGTTTCTTCTTTTGCTGTTTGGTTCGAGGGGAGAATCTCGTCTGATTGAGACGAAACCTCTCGATATTCGGAGATTCCTACGGTTCAGATCTGGAAGAAGCGGTGATGGCTCCGTCGCCTGCGGAGCCGATAGGCGATTCCGGAACCGGAGATTCTCAGAGATCTATTCCGACGCCGTTTCTAACAAAAACGTATCAACTCGTCGATGATCCGGATGTCGACGACCTCATCTCGTGGAACGAAGATGGATCTACCTTCATAGTCTGGCGACCTGCTGAATTCGCTCGAGATTTACTTCCTAAATACTTCAAACACAATAACTTTTCCAGTTTCGTCCGTCAACTTAACACTTATGGATTCCGGAAGGTTGTGCCGGATCGATGGGAATTTGCGAACGATTGTTTCAAGAGAGGTGAAAAAGCACTTCTACGAGACATCCAGCGGCGGAAGGTAGCAGTGTCGGTGGCGGCTCCGGCGACGCCGGCCTCCGTCTCTGTACCACTGGTGACAGTCGCAGCGTCTCCGGCTGTGGCGGCGTGCGTGATATCGCCGGTGAATTCTGCCGAAGAGCAGGTGACGTCCTCGAACTCATCGCCGATGGAATTCCAGCGAGGTACGAGTTGCTGCACTACACCAGAACTGGTGAGAGAGAACGAGCGGCTGAGGAAGGAGAACATGCAACTGAGTCACGAGTTGACTCAGTTGAAAGGGCTCTGCAACAACATACTATCGTTGATGACGAATTACGCTTCAGGTCACCAGCAGTTGGAGTCGGTGAGCGTCCGAGACGGGAAGGCGCTAGACCTCTTGCCAGCAAGGCAGATGATGGATGACGAAGGCGCCGTCAGCGACGGGATTCAGGAAGTGAGACTGAAGGTGGAGGAGGCGGTGGCGGTGGCGACGGCGGAGGGAAGGACGCCGAAGCTGTTCGGAGTTTCTATTGGAGTGAAGCGCGTGAGAAGAGAAGAAGAAGATGAAGAAATGGTGGGGCCGAATCACGTGCAGTCGGAAGAATGTGAGACCGGGTCGGAGATTAAAGCTGAGCCGTTGGATGAGAACTCTGAAAATCCAGAGGGATCCGCATCGCAATGGCTAGAACTCGGAAATCAAGGCTCCTAAATGGCGTCGTCAGAGATGACTGACAAAGAAGAAGAAGAAGACGACGACGACGACGACGTCGACGATAACGTTTTCTTCTAAAAAAAAGAATAAAGAGAGAATGCAGAGACAAGAGGAGACCAACCCGGCCCTAGAGAGAACGTAGAATCTCACGTGTCGAGCACGTGAGATAGAAAATACACGAACTGAAAATAAATATTTGTTTTTTGTTCGTGAAAGGGTTTCAGATCGGTTGATTGGTTGGTCCCTTGTAAAAGATGAAGCCGTGGAAAATCAACCGGCTGGGTCGGTTGGTGAAGGGGATGAAATGACGGAAAAACCAACCCAGGAAGAACGGCAATTGTGACTTTGTAATTTTAAGTTTCTAACCTCTCTTCCAATTTCTATCTTCAGAAATTTAATTTAAAGGCAAAAAAGGAAGGAAAAGAACAACTGTCGGTTGTGTGGTTCTTTTGTTTTCCGGTATCCGGTGGGCCGATTGGAATGTGAGGTGTAATTTGTATGGGCTTTTTACGAGCCCACTGTAATGTTCCTCTTCAATTTTGGGTTACTATCAATAACATGCTTGGATCTTAGTTAAACTTCAAAACAAAAACAAACTTATGTATTCTAGGGGCGGATGGGTGTAAGGATGCGTTCATGAAGCGCGGTGGCCCAGAGTCCAGACCATTGAGAGACACGGGCAAAGCCACC ATGGCTCCGTCGCCTGCGGAGCCGATAGGCGATTCCGGAACCGGAGATTCTCAGAGATCTATTCCGACGCCGTTTCTAACAAAAACGTATCAACTCGTCGATGATCCGGATGTCGACGACCTCATCTCGTGGAACGAAGATGGATCTACCTTCATAGTCTGGCGACCTGCTGAATTCGCTCGAGATTTACTTCCTAAATACTTCAAACACAATAACTTTTCCAGTTTCGTCCGTCAACTTAACACTTATGGATTCCGGAAGGTTGTGCCGGATCGATGGGAATTTGCGAACGATTGTTTCAAGAGAGGTGAAAAAGCACTTCTACGAGACATCCAGCGGCGGAAGGTAGCAGTGTCGGTGGCGGCTCCGGCGACGCCGGCCTCCGTCTCTGTACCACTGGTGACAGTCGCAGCGTCTCCGGCTGTGGCGGCGTGCGTGATATCGCCGGTGAATTCTGCCGAAGAGCAGGTGACGTCCTCGAACTCATCGCCGATGGAATTCCAGCGAGGTACGAGTTGCTGCACTACACCAGAACTGGTGAGAGAGAACGAGCGGCTGAGGAAGGAGAACATGCAACTGAGTCACGAGTTGACTCAGTTGAAAGGGCTCTGCAACAACATACTATCGTTGATGACGAATTACGCTTCAGGTCACCAGCAGTTGGAGTCGGTGAGCGTCCGAGACGGGAAGGCGCTAGACCTCTTGCCAGCAAGGCAGATGATGGATGACGAAGGCGCCGTCAGCGACGGGATTCAGGAAGTGAGACTGAAGGTGGAGGAGGCGGTGGCGGTGGCGACGGCGGAGGGAAGGACGCCGAAGCTGTTCGGAGTTTCTATTGGAGTGAAGCGCGTGAGAAGAGAAGAAGAAGATGAAGAAATGGTGGGGCCGAATCACGTGCAGTCGGAAGAATGTGAGACCGGGTCGGAGATTAAAGCTGAGCCGTTGGATGAGAACTCTGAAAATCCAGAGGGATCCGCATCGCAATGGCTAGAACTCGGAAATCAAGGCTCCTAA MAPSPAEPIGDSGTGDSQRSIPTPFLTKTYQLVDDPDVDDLISWNEDGSTFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFANDCFKRGEKALLRDIQRRKVAVSVAAPATPASVSVPLVTVAASPAVAACVISPVNSAEEQVTSSNSSPMEFQRGTSCCTTPELVRENERLRKENMQLSHELTQLKGLCNNILSLMTNYASGHQQLESVSVRDGKALDLLPARQMMDDEGAVSDGIQEVRLKVEEAVAVATAEGRTPKLFGVSIGVKRVRREEEDEEMVGPNHVQSEECETGSEIKAEPLDENSENPEGSASQWLELGNQGS
BLAST of Carg02510 vs. NCBI nr
Match: XP_022958418.1 (heat stress transcription factor B-2b-like [Cucurbita moschata] >XP_022958419.1 heat stress transcription factor B-2b-like [Cucurbita moschata] >XP_022958420.1 heat stress transcription factor B-2b-like [Cucurbita moschata]) HSP 1 Score: 652.1 bits (1681), Expect = 1.0e-183 Identity = 335/337 (99.41%), Postives = 337/337 (100.00%), Query Frame = 0
BLAST of Carg02510 vs. NCBI nr
Match: XP_023521234.1 (heat stress transcription factor B-2b-like [Cucurbita pepo subsp. pepo] >XP_023521235.1 heat stress transcription factor B-2b-like [Cucurbita pepo subsp. pepo] >XP_023534265.1 heat stress transcription factor B-2b-like [Cucurbita pepo subsp. pepo] >XP_023534267.1 heat stress transcription factor B-2b-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 649.4 bits (1674), Expect = 6.5e-183 Identity = 334/337 (99.11%), Postives = 334/337 (99.11%), Query Frame = 0
BLAST of Carg02510 vs. NCBI nr
Match: XP_022996371.1 (heat stress transcription factor B-2b-like [Cucurbita maxima] >XP_022996372.1 heat stress transcription factor B-2b-like [Cucurbita maxima]) HSP 1 Score: 634.0 bits (1634), Expect = 2.8e-178 Identity = 329/337 (97.63%), Postives = 331/337 (98.22%), Query Frame = 0
BLAST of Carg02510 vs. NCBI nr
Match: XP_022157722.1 (heat stress transcription factor B-2b [Momordica charantia] >XP_022157731.1 heat stress transcription factor B-2b [Momordica charantia] >XP_022157741.1 heat stress transcription factor B-2b [Momordica charantia] >XP_022157749.1 heat stress transcription factor B-2b [Momordica charantia] >XP_022157757.1 heat stress transcription factor B-2b [Momordica charantia] >XP_022157765.1 heat stress transcription factor B-2b [Momordica charantia]) HSP 1 Score: 532.7 bits (1371), Expect = 8.9e-148 Identity = 292/343 (85.13%), Postives = 306/343 (89.21%), Query Frame = 0
BLAST of Carg02510 vs. NCBI nr
Match: XP_004143930.1 (PREDICTED: heat stress transcription factor B-2b [Cucumis sativus] >KGN50137.1 hypothetical protein Csa_5G155480 [Cucumis sativus]) HSP 1 Score: 527.3 bits (1357), Expect = 3.8e-146 Identity = 283/341 (82.99%), Postives = 295/341 (86.51%), Query Frame = 0
BLAST of Carg02510 vs. TAIR10
Match: AT5G62020.1 (heat shock transcription factor B2A) HSP 1 Score: 206.1 bits (523), Expect = 3.5e-53 Identity = 122/278 (43.88%), Postives = 156/278 (56.12%), Query Frame = 0
BLAST of Carg02510 vs. TAIR10
Match: AT4G11660.1 (winged-helix DNA-binding transcription factor family protein) HSP 1 Score: 197.6 bits (501), Expect = 1.2e-50 Identity = 139/336 (41.37%), Postives = 158/336 (47.02%), Query Frame = 0
BLAST of Carg02510 vs. TAIR10
Match: AT1G46264.1 (heat shock transcription factor B4) HSP 1 Score: 165.6 bits (418), Expect = 5.2e-41 Identity = 93/203 (45.81%), Postives = 116/203 (57.14%), Query Frame = 0
BLAST of Carg02510 vs. TAIR10
Match: AT4G17750.1 (heat shock factor 1) HSP 1 Score: 153.3 bits (386), Expect = 2.7e-37 Identity = 72/114 (63.16%), Postives = 86/114 (75.44%), Query Frame = 0
BLAST of Carg02510 vs. TAIR10
Match: AT1G32330.1 (heat shock transcription factor A1D) HSP 1 Score: 150.6 bits (379), Expect = 1.7e-36 Identity = 67/96 (69.79%), Postives = 80/96 (83.33%), Query Frame = 0
BLAST of Carg02510 vs. Swiss-Prot
Match: sp|Q9SCW4|HFB2A_ARATH (Heat stress transcription factor B-2a OS=Arabidopsis thaliana OX=3702 GN=HSFB2A PE=2 SV=1) HSP 1 Score: 206.1 bits (523), Expect = 6.3e-52 Identity = 122/278 (43.88%), Postives = 156/278 (56.12%), Query Frame = 0
BLAST of Carg02510 vs. Swiss-Prot
Match: sp|Q9T0D3|HFB2B_ARATH (Heat stress transcription factor B-2b OS=Arabidopsis thaliana OX=3702 GN=HSFB2B PE=2 SV=1) HSP 1 Score: 197.6 bits (501), Expect = 2.2e-49 Identity = 139/336 (41.37%), Postives = 158/336 (47.02%), Query Frame = 0
BLAST of Carg02510 vs. Swiss-Prot
Match: sp|Q652B0|HFB2C_ORYSJ (Heat stress transcription factor B-2c OS=Oryza sativa subsp. japonica OX=39947 GN=HSFB2C PE=2 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 9.4e-48 Identity = 110/224 (49.11%), Postives = 124/224 (55.36%), Query Frame = 0
BLAST of Carg02510 vs. Swiss-Prot
Match: sp|P22335|HSF24_SOLPE (Heat shock factor protein HSF24 OS=Solanum peruvianum OX=4082 GN=HSF24 PE=2 SV=1) HSP 1 Score: 187.2 bits (474), Expect = 3.0e-46 Identity = 116/280 (41.43%), Postives = 158/280 (56.43%), Query Frame = 0
BLAST of Carg02510 vs. Swiss-Prot
Match: sp|Q6Z9C8|HFB2B_ORYSJ (Heat stress transcription factor B-2b OS=Oryza sativa subsp. japonica OX=39947 GN=HSFB2B PE=2 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 2.4e-43 Identity = 125/324 (38.58%), Postives = 154/324 (47.53%), Query Frame = 0
BLAST of Carg02510 vs. TrEMBL
Match: tr|A0A0A0KNZ8|A0A0A0KNZ8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G155480 PE=3 SV=1) HSP 1 Score: 527.3 bits (1357), Expect = 2.5e-146 Identity = 283/341 (82.99%), Postives = 295/341 (86.51%), Query Frame = 0
BLAST of Carg02510 vs. TrEMBL
Match: tr|A0A1S3AU16|A0A1S3AU16_CUCME (heat stress transcription factor B-2b OS=Cucumis melo OX=3656 GN=LOC103482716 PE=3 SV=1) HSP 1 Score: 521.5 bits (1342), Expect = 1.4e-144 Identity = 281/340 (82.65%), Postives = 292/340 (85.88%), Query Frame = 0
BLAST of Carg02510 vs. TrEMBL
Match: tr|A0A0D2R1D0|A0A0D2R1D0_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_004G208800 PE=3 SV=1) HSP 1 Score: 362.8 bits (930), Expect = 8.1e-97 Identity = 215/338 (63.61%), Postives = 240/338 (71.01%), Query Frame = 0
BLAST of Carg02510 vs. TrEMBL
Match: tr|A0A0B0N1U4|A0A0B0N1U4_GOSAR (Heat stress transcription factor B-2b-like protein OS=Gossypium arboreum OX=29729 GN=F383_33103 PE=3 SV=1) HSP 1 Score: 360.1 bits (923), Expect = 5.2e-96 Identity = 212/338 (62.72%), Postives = 239/338 (70.71%), Query Frame = 0
BLAST of Carg02510 vs. TrEMBL
Match: tr|A0A1U8LJP1|A0A1U8LJP1_GOSHI (heat stress transcription factor B-2b-like OS=Gossypium hirsutum OX=3635 GN=LOC107926969 PE=3 SV=1) HSP 1 Score: 358.6 bits (919), Expect = 1.5e-95 Identity = 211/338 (62.43%), Postives = 238/338 (70.41%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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