Carg02499 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg02499
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose 4-keto-reductase
Location	Cucurbita_argyrosperma_scaffold_009 : 266087 .. 267344 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTATTCTCGCTGACAGTGGCTCAGGTCCTCTCAAGTTCTTGATTTACGGCCGGACCGGCTGGATTGGCGGTTTGCTTGGCCAGCTCTGTCAACAACAGGGGATCGATTTCGTGTATGGTTCCGGCCGCCTCGAGAACCGCACCTCCCTCGAGGCCGACATCGCCGCCGTCAAACCCACCCATGTCTTCAACGCCGCCGGCGTCACCGGCCGCCCGAACGTCGACTGGTGCGAATCGCATAAGGTTGAGACCATTAGAACCAATGTGGTCGGAACCTTGAACTTGGCCGATGTGTGCCGCGAGAGAGGGTTGATCTTAATTAACTACGCCACTGGCTGCATTTTCGAGTACGATTCGGCGCATCCTCTCAATTCGGGGATTGGATTCAAGGAGGATGAAATCCCTAATTTCATTGGGTCCTTTTATTCCAAGACTAAAGCCATGGTGAGCCCTAGATTTTGACTGCTTCATTGTTGTTTGATTATTCACTGATTTTGATTCTGTTTGATTATTCACTGATTTTGATTCTGTATGATTCTTAGATGCGTTGTGAAATTTGAGTGTGGATCTATGATTACAGAGTGAATGGCTCTGTTTAGAGAAATCATAACTGAAATCAGCCATGTATGATTGTTCTTGGGGTGGAGTTTGTGAATGCTCTTTAGATCTGGATTATTGTCATTAGAATGTCTTGAATTTCTGATCATTGATTTCTATTCGATGAGAATGCATCAAATATATTCTTTGAATCTGATGGGCGGATTCTACTTTCATGTTACTTTCACATTTGGGGGATTAAAAGGTGGAGGATCTGCTGAAGAACTACGAGAATGTGTGCACATTGCGCGTTAGGATGCCGATATCCTCCGACTTATCGAACCCTCGCAACTTCATCACAAAGATAACTAGATATGAGAAGGTGGTTGACATCCCGAACTCGATGACGATCTTGGATGAACTCCTGCCGATATCGATCGAAATGGCAAAAAGAAATCTCACAGGAATATGGAATTTCACGAATCCAGGAGTGGTGAGCCACAATGAGATCTTGGAGATGTACAAGCAATTCATCGACCCCAATTTGACATGGAAGAACTTCAGCCTGGAGGAGCAAGCCAAAGTGATCGTAGCTCCTCGGAGCAACAACGAGATGGATGCGACCAAGTTGAAGACCGAATTCCCGGAGCTGTTGTCCATCAAGGACTCCCTGGTCAAGCATGTCTTCAAGCCAAACCAGAAGACTTGTGCAGCTTAG

mRNA sequence

ATGGGTATTCTCGCTGACAGTGGCTCAGGTCCTCTCAAGTTCTTGATTTACGGCCGGACCGGCTGGATTGGCGGTTTGCTTGGCCAGCTCTGTCAACAACAGGGGATCGATTTCGTGTATGGTTCCGGCCGCCTCGAGAACCGCACCTCCCTCGAGGCCGACATCGCCGCCGTCAAACCCACCCATGTCTTCAACGCCGCCGGCGTCACCGGCCGCCCGAACGTCGACTGGTGCGAATCGCATAAGGTTGAGACCATTAGAACCAATGTGGTCGGAACCTTGAACTTGGCCGATGTGTGCCGCGAGAGAGGGTTGATCTTAATTAACTACGCCACTGGCTGCATTTTCGAGTACGATTCGGCGCATCCTCTCAATTCGGGGATTGGATTCAAGGAGGATGAAATCCCTAATTTCATTGGGTCCTTTTATTCCAAGACTAAAGCCATGGTGGAGGATCTGCTGAAGAACTACGAGAATGTGTGCACATTGCGCGTTAGGATGCCGATATCCTCCGACTTATCGAACCCTCGCAACTTCATCACAAAGATAACTAGATATGAGAAGGTGGTTGACATCCCGAACTCGATGACGATCTTGGATGAACTCCTGCCGATATCGATCGAAATGGCAAAAAGAAATCTCACAGGAATATGGAATTTCACGAATCCAGGAGTGGTGAGCCACAATGAGATCTTGGAGATGTACAAGCAATTCATCGACCCCAATTTGACATGGAAGAACTTCAGCCTGGAGGAGCAAGCCAAAGTGATCGTAGCTCCTCGGAGCAACAACGAGATGGATGCGACCAAGTTGAAGACCGAATTCCCGGAGCTGTTGTCCATCAAGGACTCCCTGGTCAAGCATGTCTTCAAGCCAAACCAGAAGACTTGTGCAGCTTAG

Coding sequence (CDS)

ATGGGTATTCTCGCTGACAGTGGCTCAGGTCCTCTCAAGTTCTTGATTTACGGCCGGACCGGCTGGATTGGCGGTTTGCTTGGCCAGCTCTGTCAACAACAGGGGATCGATTTCGTGTATGGTTCCGGCCGCCTCGAGAACCGCACCTCCCTCGAGGCCGACATCGCCGCCGTCAAACCCACCCATGTCTTCAACGCCGCCGGCGTCACCGGCCGCCCGAACGTCGACTGGTGCGAATCGCATAAGGTTGAGACCATTAGAACCAATGTGGTCGGAACCTTGAACTTGGCCGATGTGTGCCGCGAGAGAGGGTTGATCTTAATTAACTACGCCACTGGCTGCATTTTCGAGTACGATTCGGCGCATCCTCTCAATTCGGGGATTGGATTCAAGGAGGATGAAATCCCTAATTTCATTGGGTCCTTTTATTCCAAGACTAAAGCCATGGTGGAGGATCTGCTGAAGAACTACGAGAATGTGTGCACATTGCGCGTTAGGATGCCGATATCCTCCGACTTATCGAACCCTCGCAACTTCATCACAAAGATAACTAGATATGAGAAGGTGGTTGACATCCCGAACTCGATGACGATCTTGGATGAACTCCTGCCGATATCGATCGAAATGGCAAAAAGAAATCTCACAGGAATATGGAATTTCACGAATCCAGGAGTGGTGAGCCACAATGAGATCTTGGAGATGTACAAGCAATTCATCGACCCCAATTTGACATGGAAGAACTTCAGCCTGGAGGAGCAAGCCAAAGTGATCGTAGCTCCTCGGAGCAACAACGAGATGGATGCGACCAAGTTGAAGACCGAATTCCCGGAGCTGTTGTCCATCAAGGACTCCCTGGTCAAGCATGTCTTCAAGCCAAACCAGAAGACTTGTGCAGCTTAG

Protein sequence

MGILADSGSGPLKFLIYGRTGWIGGLLGQLCQQQGIDFVYGSGRLENRTSLEADIAAVKPTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLNLADVCRERGLILINYATGCIFEYDSAHPLNSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFIDPNLTWKNFSLEEQAKVIVAPRSNNEMDATKLKTEFPELLSIKDSLVKHVFKPNQKTCAA

Homology

[Close]

BLAST of Carg02499 vs. NCBI nr
Match: XP_022958450.1 (bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase-like [Cucurbita moschata] >XP_022958451.1 bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase-like [Cucurbita moschata] >XP_022995884.1 bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase-like [Cucurbita maxima] >XP_022995885.1 bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase-like [Cucurbita maxima] >XP_022995886.1 bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase-like [Cucurbita maxima] >XP_023534026.1 bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 608.6 bits (1568), Expect = 1.1e-170
Identity = 298/299 (99.67%), Postives = 298/299 (99.67%), Query Frame = 0


Query: 1   MGILADSGSGPLKFLIYGRTGWIGGLLGQLCQQQGIDFVYGSGRLENRTSLEADIAAVKP 60
           MGILADSGSGPLKFLIYGRTGWIGGLLGQLCQQQGIDFVYGSGRLENRTSLEADIAAVKP
Sbjct: 1   MGILADSGSGPLKFLIYGRTGWIGGLLGQLCQQQGIDFVYGSGRLENRTSLEADIAAVKP 60

Query: 61  THVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLNLADVCRERGLILINYATGCIFEYDS 120
           THVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLNLADVCRERGLILINYATGCIFEYDS
Sbjct: 61  THVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLNLADVCRERGLILINYATGCIFEYDS 120

Query: 121 AHPLNSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFI 180
           AHPLNSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFI
Sbjct: 121 AHPLNSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFI 180

Query: 181 TKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFID 240
           TKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFID
Sbjct: 181 TKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFID 240

Query: 241 PNLTWKNFSLEEQAKVIVAPRSNNEMDATKLKTEFPELLSIKDSLVKHVFKPNQKTCAA 300
           PNLTWKNFSLEEQAKVIVAPRSNNEMDATKLKTEFPELLSIKDSLVKHVFKPNQKT AA
Sbjct: 241 PNLTWKNFSLEEQAKVIVAPRSNNEMDATKLKTEFPELLSIKDSLVKHVFKPNQKTSAA 299

[Close]

BLAST of Carg02499 vs. NCBI nr
Match: XP_008437195.1 (PREDICTED: bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase [Cucumis melo])

HSP 1 Score: 580.9 bits (1496), Expect = 2.5e-162
Identity = 285/300 (95.00%), Postives = 290/300 (96.67%), Query Frame = 0


Query: 1   MGILADSGSG-PLKFLIYGRTGWIGGLLGQLCQQQGIDFVYGSGRLENRTSLEADIAAVK 60
           MGILADSGSG  LKFLIYGRTGWIGGLLG LCQQQGIDF YGSGRLENR SLEADIAAVK
Sbjct: 1   MGILADSGSGSSLKFLIYGRTGWIGGLLGHLCQQQGIDFTYGSGRLENRASLEADIAAVK 60

Query: 61  PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLNLADVCRERGLILINYATGCIFEYD 120
           PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTL LADVCRERGLILINYATGCIFEYD
Sbjct: 61  PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCRERGLILINYATGCIFEYD 120

Query: 121 SAHPLNSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF 180
           SAHP+NSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF
Sbjct: 121 SAHPINSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF 180

Query: 181 ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI 240
           ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI
Sbjct: 181 ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI 240

Query: 241 DPNLTWKNFSLEEQAKVIVAPRSNNEMDATKLKTEFPELLSIKDSLVKHVFKPNQKTCAA 300
           DPN TWKNF+LEEQAKVIVAPRSNNE+DATKLK EFPELLSIKDSL+K+VFKPNQKT  A
Sbjct: 241 DPNFTWKNFNLEEQAKVIVAPRSNNELDATKLKNEFPELLSIKDSLLKYVFKPNQKTPTA 300

[Close]

BLAST of Carg02499 vs. NCBI nr
Match: XP_023549712.1 (bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 577.0 bits (1486), Expect = 3.7e-161
Identity = 281/300 (93.67%), Postives = 291/300 (97.00%), Query Frame = 0


Query: 1   MGILADSGSGP-LKFLIYGRTGWIGGLLGQLCQQQGIDFVYGSGRLENRTSLEADIAAVK 60
           MG+LADSGS P LKFLIYGRTGWIGGLLG++C+QQGI F YGSGRLENR SLEADI AVK
Sbjct: 1   MGVLADSGSAPSLKFLIYGRTGWIGGLLGKICEQQGIHFAYGSGRLENRVSLEADIDAVK 60

Query: 61  PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLNLADVCRERGLILINYATGCIFEYD 120
           PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTL+LADVCRERGLILINYATGCIFEYD
Sbjct: 61  PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYD 120

Query: 121 SAHPLNSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF 180
           SAHPLNSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF
Sbjct: 121 SAHPLNSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF 180

Query: 181 ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI 240
           ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI
Sbjct: 181 ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI 240

Query: 241 DPNLTWKNFSLEEQAKVIVAPRSNNEMDATKLKTEFPELLSIKDSLVKHVFKPNQKTCAA 300
           DPN TWKNF+LEEQAKVIVAPRSNNE+DATKLK EFPELLSIK+SL+K+VFKPNQKT AA
Sbjct: 241 DPNFTWKNFTLEEQAKVIVAPRSNNELDATKLKNEFPELLSIKESLIKNVFKPNQKTSAA 300

[Close]

BLAST of Carg02499 vs. NCBI nr
Match: XP_022922271.1 (bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase-like [Cucurbita moschata])

HSP 1 Score: 576.2 bits (1484), Expect = 6.2e-161
Identity = 281/300 (93.67%), Postives = 290/300 (96.67%), Query Frame = 0


Query: 1   MGILADSGSGP-LKFLIYGRTGWIGGLLGQLCQQQGIDFVYGSGRLENRTSLEADIAAVK 60
           MG+LADSGS P LKFLIYGRTGWIGGLLG++C+QQGI F YGSGRLENR SLEADI AVK
Sbjct: 1   MGVLADSGSAPSLKFLIYGRTGWIGGLLGKICEQQGIHFAYGSGRLENRVSLEADIDAVK 60

Query: 61  PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLNLADVCRERGLILINYATGCIFEYD 120
           PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTL+LADVCRERGLILINYATGCIFEYD
Sbjct: 61  PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYD 120

Query: 121 SAHPLNSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF 180
            AHPLNSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF
Sbjct: 121 LAHPLNSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF 180

Query: 181 ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI 240
           ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI
Sbjct: 181 ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI 240

Query: 241 DPNLTWKNFSLEEQAKVIVAPRSNNEMDATKLKTEFPELLSIKDSLVKHVFKPNQKTCAA 300
           DPN TWKNF+LEEQAKVIVAPRSNNE+DATKLK EFPELLSIKDSL+K+VFKPNQKT AA
Sbjct: 241 DPNFTWKNFTLEEQAKVIVAPRSNNELDATKLKNEFPELLSIKDSLIKNVFKPNQKTSAA 300

[Close]

BLAST of Carg02499 vs. NCBI nr
Match: XP_022969861.1 (bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase-like [Cucurbita maxima])

HSP 1 Score: 575.9 bits (1483), Expect = 8.2e-161
Identity = 281/300 (93.67%), Postives = 291/300 (97.00%), Query Frame = 0


Query: 1   MGILADSGSGP-LKFLIYGRTGWIGGLLGQLCQQQGIDFVYGSGRLENRTSLEADIAAVK 60
           MG+LADS S P LKFLIYGRTGWIGGLLG++C+QQGI F YGSGRLENR SLEADIAAVK
Sbjct: 1   MGVLADSVSAPSLKFLIYGRTGWIGGLLGKICEQQGIHFAYGSGRLENRVSLEADIAAVK 60

Query: 61  PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLNLADVCRERGLILINYATGCIFEYD 120
           PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTL+LADVCRERGLILINYATGCIFEYD
Sbjct: 61  PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYD 120

Query: 121 SAHPLNSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF 180
           SAHPLNSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF
Sbjct: 121 SAHPLNSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF 180

Query: 181 ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI 240
           ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI
Sbjct: 181 ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI 240

Query: 241 DPNLTWKNFSLEEQAKVIVAPRSNNEMDATKLKTEFPELLSIKDSLVKHVFKPNQKTCAA 300
           DPN TWKNF+LEEQAKVIVAPRSNNE+DATKLK EFPELLSIK+SL+K+VFKPNQKT AA
Sbjct: 241 DPNFTWKNFTLEEQAKVIVAPRSNNELDATKLKNEFPELLSIKESLIKNVFKPNQKTSAA 300

[Close]

BLAST of Carg02499 vs. TAIR10
Match: AT1G63000.1 (nucleotide-rhamnose synthase/epimerase-reductase)

HSP 1 Score: 514.6 bits (1324), Expect = 4.1e-146
Identity = 242/290 (83.45%), Postives = 269/290 (92.76%), Query Frame = 0


Query: 7   SGSGPLKFLIYGRTGWIGGLLGQLCQQQGIDFVYGSGRLENRTSLEADIAAVKPTHVFNA 66
           S S    FLIYG+TGWIGGLLG+LC+ QGI + YGSGRL++R S+ ADI +VKP+HVFNA
Sbjct: 8   SSSSSFNFLIYGKTGWIGGLLGKLCEAQGITYTYGSGRLQDRQSIVADIESVKPSHVFNA 67

Query: 67  AGVTGRPNVDWCESHKVETIRTNVVGTLNLADVCRERGLILINYATGCIFEYDSAHPLNS 126
           AGVTGRPNVDWCESHKVETIRTNV GTL LAD+CRE+GL+LINYATGCIFEYDS HPL S
Sbjct: 68  AGVTGRPNVDWCESHKVETIRTNVAGTLTLADICREKGLVLINYATGCIFEYDSGHPLGS 127

Query: 127 GIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKITRY 186
           GIGFKE++ PNF GSFYSKTKAMVE+LLKNYENVCTLRVRMPISSDL+NPRNFITKI RY
Sbjct: 128 GIGFKEEDTPNFTGSFYSKTKAMVEELLKNYENVCTLRVRMPISSDLTNPRNFITKIARY 187

Query: 187 EKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFIDPNLTWK 246
           EKVVDIPNSMTILDELLPISIEMAKRNLTGI+NFTNPGVVSHNEILEMY+ +IDP+ TWK
Sbjct: 188 EKVVDIPNSMTILDELLPISIEMAKRNLTGIYNFTNPGVVSHNEILEMYRDYIDPSFTWK 247

Query: 247 NFSLEEQAKVIVAPRSNNEMDATKLKTEFPELLSIKDSLVKHVFKPNQKT 297
           NF+LEEQAKVIVAPRSNNE+DATKLKTEFPEL+SIK+SL+K VF+PN+KT
Sbjct: 248 NFTLEEQAKVIVAPRSNNELDATKLKTEFPELMSIKESLIKFVFEPNKKT 297

[Close]

BLAST of Carg02499 vs. TAIR10
Match: AT1G78570.1 (rhamnose biosynthesis 1)

HSP 1 Score: 482.6 bits (1241), Expect = 1.7e-136
Identity = 225/285 (78.95%), Postives = 256/285 (89.82%), Query Frame = 0


Query: 12  LKFLIYGRTGWIGGLLGQLCQQQGIDFVYGSGRLENRTSLEADIAAVKPTHVFNAAGVTG 71
           LKFLIYG+TGWIGGLLG++C +QGI + YG GRLE+R+SL  DI +VKPTHVFN+AGVTG
Sbjct: 385 LKFLIYGKTGWIGGLLGKICDKQGIAYEYGKGRLEDRSSLLQDIQSVKPTHVFNSAGVTG 444

Query: 72  RPNVDWCESHKVETIRTNVVGTLNLADVCRERGLILINYATGCIFEYDSAHPLNSGIGFK 131
           RPNVDWCESHK ETIR NV GTL LADVCRE GL+++N+ATGCIFEYD  HP  SGIGFK
Sbjct: 445 RPNVDWCESHKTETIRANVAGTLTLADVCREHGLLMMNFATGCIFEYDDKHPEGSGIGFK 504

Query: 132 EDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKITRYEKVVD 191
           E++ PNF GSFYSKTKAMVE+LLK Y+NVCTLRVRMPISSDL+NPRNFITKI+RY KVV+
Sbjct: 505 EEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVN 564

Query: 192 IPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFIDPNLTWKNFSLE 251
           IPNSMT+LDELLPISIEMAKRNL GIWNFTNPGVVSHNEILEMY+ +I+P   W NF+LE
Sbjct: 565 IPNSMTVLDELLPISIEMAKRNLKGIWNFTNPGVVSHNEILEMYRDYINPEFKWANFTLE 624

Query: 252 EQAKVIVAPRSNNEMDATKLKTEFPELLSIKDSLVKHVFKPNQKT 297
           EQAKVIVAPRSNNEMDA+KLK EFPELLSIK+SL+K+ + PN+KT
Sbjct: 625 EQAKVIVAPRSNNEMDASKLKKEFPELLSIKESLIKYAYGPNKKT 669

[Close]

BLAST of Carg02499 vs. TAIR10
Match: AT3G14790.1 (rhamnose biosynthesis 3)

HSP 1 Score: 481.9 bits (1239), Expect = 2.9e-136
Identity = 223/285 (78.25%), Postives = 258/285 (90.53%), Query Frame = 0


Query: 12  LKFLIYGRTGWIGGLLGQLCQQQGIDFVYGSGRLENRTSLEADIAAVKPTHVFNAAGVTG 71
           LKFLIYG+TGW+GGLLG+LC++QGI + YG GRLE+R SL ADI ++KP+HVFNAAG+TG
Sbjct: 380 LKFLIYGKTGWLGGLLGKLCEKQGIPYEYGKGRLEDRASLIADIRSIKPSHVFNAAGLTG 439

Query: 72  RPNVDWCESHKVETIRTNVVGTLNLADVCRERGLILINYATGCIFEYDSAHPLNSGIGFK 131
           RPNVDWCESHK ETIR NV GTL LADVCRE  L+++N+ATGCIFEYD+AHP  SGIGFK
Sbjct: 440 RPNVDWCESHKTETIRVNVAGTLTLADVCRENDLLMMNFATGCIFEYDAAHPEGSGIGFK 499

Query: 132 EDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKITRYEKVVD 191
           E++ PNF GSFYSKTKAMVE+LL+ ++NVCTLRVRMPISSDL+NPRNFITKI+RY KVV+
Sbjct: 500 EEDKPNFTGSFYSKTKAMVEELLREFDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVN 559

Query: 192 IPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFIDPNLTWKNFSLE 251
           IPNSMTILDELLPISIEMAKRNL GIWNFTNPGVVSHNEILEMYK +I+P+  W NF+LE
Sbjct: 560 IPNSMTILDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKSYIEPDFKWSNFNLE 619

Query: 252 EQAKVIVAPRSNNEMDATKLKTEFPELLSIKDSLVKHVFKPNQKT 297
           EQAKVIVAPRSNNEMD  KL  EFPE+LSIKDSL+K+VF+PN++T
Sbjct: 620 EQAKVIVAPRSNNEMDGAKLSKEFPEMLSIKDSLIKYVFEPNKRT 664

[Close]

BLAST of Carg02499 vs. TAIR10
Match: AT1G53500.1 (NAD-dependent epimerase/dehydratase family protein)

HSP 1 Score: 478.4 bits (1230), Expect = 3.2e-135
Identity = 223/292 (76.37%), Postives = 259/292 (88.70%), Query Frame = 0


Query: 6   DSG-SGPLKFLIYGRTGWIGGLLGQLCQQQGIDFVYGSGRLENRTSLEADIAAVKPTHVF 65
           DSG    LKFLIYG+TGW+GGLLG+LC++QGI + YG GRLE+R SL ADI ++KPTHVF
Sbjct: 376 DSGDKASLKFLIYGKTGWLGGLLGKLCEKQGITYEYGKGRLEDRASLVADIRSIKPTHVF 435

Query: 66  NAAGVTGRPNVDWCESHKVETIRTNVVGTLNLADVCRERGLILINYATGCIFEYDSAHPL 125
           NAAG+TGRPNVDWCESHK ETIR NV GTL LADVCRE  L+++N+ATGCIFEYD+ HP 
Sbjct: 436 NAAGLTGRPNVDWCESHKPETIRVNVAGTLTLADVCRENDLLMMNFATGCIFEYDATHPE 495

Query: 126 NSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKIT 185
            SGIGFKE++ PNF GSFYSKTKAMVE+LL+ ++NVCTLRVRMPISSDL+NPRNFITKI+
Sbjct: 496 GSGIGFKEEDKPNFFGSFYSKTKAMVEELLREFDNVCTLRVRMPISSDLNNPRNFITKIS 555

Query: 186 RYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFIDPNLT 245
           RY KVVDIPNSMT+LDELLPISIEMAKRNL GIWNFTNPGVVSHNEILEMYK +I+P   
Sbjct: 556 RYNKVVDIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKNYIEPGFK 615

Query: 246 WKNFSLEEQAKVIVAPRSNNEMDATKLKTEFPELLSIKDSLVKHVFKPNQKT 297
           W NF++EEQAKVIVA RSNNEMD +KL  EFPE+LSIK+SL+K+VF+PN++T
Sbjct: 616 WSNFTVEEQAKVIVAARSNNEMDGSKLSKEFPEMLSIKESLLKYVFEPNKRT 667

[Close]

BLAST of Carg02499 vs. TAIR10
Match: AT5G59290.2 (UDP-glucuronic acid decarboxylase 3)

HSP 1 Score: 56.6 bits (135), Expect = 3.0e-08
Identity = 46/179 (25.70%), Postives = 83/179 (46.37%), Query Frame = 0


Query: 83  VETIRTNVVGTLNLADVCRERGLILINYATGCIFEYDSAHPLNSGIGFKEDEIPNFIGSF 142
           V+TI+TNV+GTLN+  + +  G  ++  +T  ++     HP      +  +  P  + S 
Sbjct: 130 VKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLIHPQPE--SYWGNVNPIGVRSC 189

Query: 143 YSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPR----------NFITKITRYEKV-VD 202
           Y + K + E L+ +Y     + +R+    +   PR          NFI +  R E + V 
Sbjct: 190 YDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEALTVQ 249

Query: 203 IPNSMT----ILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFIDPNLTWK 247
            P + T     + +++   I + + N TG  N  NPG  +  E+ E  K+ I+P++  K
Sbjct: 250 KPGTQTRSFCYVSDMVDGLIRLMEGNDTGPINIGNPGEFTMVELAETVKELINPSIEIK 306

[Close]

BLAST of Carg02499 vs. Swiss-Prot
Match: sp|Q9LQ04|RMLCD_ARATH (Bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase OS=Arabidopsis thaliana OX=3702 GN=NRS/ER PE=1 SV=1)

HSP 1 Score: 514.6 bits (1324), Expect = 7.3e-145
Identity = 242/290 (83.45%), Postives = 269/290 (92.76%), Query Frame = 0


Query: 7   SGSGPLKFLIYGRTGWIGGLLGQLCQQQGIDFVYGSGRLENRTSLEADIAAVKPTHVFNA 66
           S S    FLIYG+TGWIGGLLG+LC+ QGI + YGSGRL++R S+ ADI +VKP+HVFNA
Sbjct: 8   SSSSSFNFLIYGKTGWIGGLLGKLCEAQGITYTYGSGRLQDRQSIVADIESVKPSHVFNA 67

Query: 67  AGVTGRPNVDWCESHKVETIRTNVVGTLNLADVCRERGLILINYATGCIFEYDSAHPLNS 126
           AGVTGRPNVDWCESHKVETIRTNV GTL LAD+CRE+GL+LINYATGCIFEYDS HPL S
Sbjct: 68  AGVTGRPNVDWCESHKVETIRTNVAGTLTLADICREKGLVLINYATGCIFEYDSGHPLGS 127

Query: 127 GIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKITRY 186
           GIGFKE++ PNF GSFYSKTKAMVE+LLKNYENVCTLRVRMPISSDL+NPRNFITKI RY
Sbjct: 128 GIGFKEEDTPNFTGSFYSKTKAMVEELLKNYENVCTLRVRMPISSDLTNPRNFITKIARY 187

Query: 187 EKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFIDPNLTWK 246
           EKVVDIPNSMTILDELLPISIEMAKRNLTGI+NFTNPGVVSHNEILEMY+ +IDP+ TWK
Sbjct: 188 EKVVDIPNSMTILDELLPISIEMAKRNLTGIYNFTNPGVVSHNEILEMYRDYIDPSFTWK 247

Query: 247 NFSLEEQAKVIVAPRSNNEMDATKLKTEFPELLSIKDSLVKHVFKPNQKT 297
           NF+LEEQAKVIVAPRSNNE+DATKLKTEFPEL+SIK+SL+K VF+PN+KT
Sbjct: 248 NFTLEEQAKVIVAPRSNNELDATKLKTEFPELMSIKESLIKFVFEPNKKT 297

[Close]

BLAST of Carg02499 vs. Swiss-Prot
Match: sp|Q9SYM5|RHM1_ARATH (Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1 OS=Arabidopsis thaliana OX=3702 GN=RHM1 PE=1 SV=1)

HSP 1 Score: 482.6 bits (1241), Expect = 3.1e-135
Identity = 225/285 (78.95%), Postives = 256/285 (89.82%), Query Frame = 0


Query: 12  LKFLIYGRTGWIGGLLGQLCQQQGIDFVYGSGRLENRTSLEADIAAVKPTHVFNAAGVTG 71
           LKFLIYG+TGWIGGLLG++C +QGI + YG GRLE+R+SL  DI +VKPTHVFN+AGVTG
Sbjct: 385 LKFLIYGKTGWIGGLLGKICDKQGIAYEYGKGRLEDRSSLLQDIQSVKPTHVFNSAGVTG 444

Query: 72  RPNVDWCESHKVETIRTNVVGTLNLADVCRERGLILINYATGCIFEYDSAHPLNSGIGFK 131
           RPNVDWCESHK ETIR NV GTL LADVCRE GL+++N+ATGCIFEYD  HP  SGIGFK
Sbjct: 445 RPNVDWCESHKTETIRANVAGTLTLADVCREHGLLMMNFATGCIFEYDDKHPEGSGIGFK 504

Query: 132 EDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKITRYEKVVD 191
           E++ PNF GSFYSKTKAMVE+LLK Y+NVCTLRVRMPISSDL+NPRNFITKI+RY KVV+
Sbjct: 505 EEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVN 564

Query: 192 IPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFIDPNLTWKNFSLE 251
           IPNSMT+LDELLPISIEMAKRNL GIWNFTNPGVVSHNEILEMY+ +I+P   W NF+LE
Sbjct: 565 IPNSMTVLDELLPISIEMAKRNLKGIWNFTNPGVVSHNEILEMYRDYINPEFKWANFTLE 624

Query: 252 EQAKVIVAPRSNNEMDATKLKTEFPELLSIKDSLVKHVFKPNQKT 297
           EQAKVIVAPRSNNEMDA+KLK EFPELLSIK+SL+K+ + PN+KT
Sbjct: 625 EQAKVIVAPRSNNEMDASKLKKEFPELLSIKESLIKYAYGPNKKT 669

[Close]

BLAST of Carg02499 vs. Swiss-Prot
Match: sp|Q9LH76|RHM3_ARATH (Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM3 OS=Arabidopsis thaliana OX=3702 GN=RHM3 PE=2 SV=1)

HSP 1 Score: 481.9 bits (1239), Expect = 5.2e-135
Identity = 223/285 (78.25%), Postives = 258/285 (90.53%), Query Frame = 0


Query: 12  LKFLIYGRTGWIGGLLGQLCQQQGIDFVYGSGRLENRTSLEADIAAVKPTHVFNAAGVTG 71
           LKFLIYG+TGW+GGLLG+LC++QGI + YG GRLE+R SL ADI ++KP+HVFNAAG+TG
Sbjct: 380 LKFLIYGKTGWLGGLLGKLCEKQGIPYEYGKGRLEDRASLIADIRSIKPSHVFNAAGLTG 439

Query: 72  RPNVDWCESHKVETIRTNVVGTLNLADVCRERGLILINYATGCIFEYDSAHPLNSGIGFK 131
           RPNVDWCESHK ETIR NV GTL LADVCRE  L+++N+ATGCIFEYD+AHP  SGIGFK
Sbjct: 440 RPNVDWCESHKTETIRVNVAGTLTLADVCRENDLLMMNFATGCIFEYDAAHPEGSGIGFK 499

Query: 132 EDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKITRYEKVVD 191
           E++ PNF GSFYSKTKAMVE+LL+ ++NVCTLRVRMPISSDL+NPRNFITKI+RY KVV+
Sbjct: 500 EEDKPNFTGSFYSKTKAMVEELLREFDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVN 559

Query: 192 IPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFIDPNLTWKNFSLE 251
           IPNSMTILDELLPISIEMAKRNL GIWNFTNPGVVSHNEILEMYK +I+P+  W NF+LE
Sbjct: 560 IPNSMTILDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKSYIEPDFKWSNFNLE 619

Query: 252 EQAKVIVAPRSNNEMDATKLKTEFPELLSIKDSLVKHVFKPNQKT 297
           EQAKVIVAPRSNNEMD  KL  EFPE+LSIKDSL+K+VF+PN++T
Sbjct: 620 EQAKVIVAPRSNNEMDGAKLSKEFPEMLSIKDSLIKYVFEPNKRT 664

[Close]

BLAST of Carg02499 vs. Swiss-Prot
Match: sp|Q9LPG6|RHM2_ARATH (Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM2 OS=Arabidopsis thaliana OX=3702 GN=RHM2 PE=1 SV=1)

HSP 1 Score: 478.4 bits (1230), Expect = 5.8e-134
Identity = 223/292 (76.37%), Postives = 259/292 (88.70%), Query Frame = 0


Query: 6   DSG-SGPLKFLIYGRTGWIGGLLGQLCQQQGIDFVYGSGRLENRTSLEADIAAVKPTHVF 65
           DSG    LKFLIYG+TGW+GGLLG+LC++QGI + YG GRLE+R SL ADI ++KPTHVF
Sbjct: 376 DSGDKASLKFLIYGKTGWLGGLLGKLCEKQGITYEYGKGRLEDRASLVADIRSIKPTHVF 435

Query: 66  NAAGVTGRPNVDWCESHKVETIRTNVVGTLNLADVCRERGLILINYATGCIFEYDSAHPL 125
           NAAG+TGRPNVDWCESHK ETIR NV GTL LADVCRE  L+++N+ATGCIFEYD+ HP 
Sbjct: 436 NAAGLTGRPNVDWCESHKPETIRVNVAGTLTLADVCRENDLLMMNFATGCIFEYDATHPE 495

Query: 126 NSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKIT 185
            SGIGFKE++ PNF GSFYSKTKAMVE+LL+ ++NVCTLRVRMPISSDL+NPRNFITKI+
Sbjct: 496 GSGIGFKEEDKPNFFGSFYSKTKAMVEELLREFDNVCTLRVRMPISSDLNNPRNFITKIS 555

Query: 186 RYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFIDPNLT 245
           RY KVVDIPNSMT+LDELLPISIEMAKRNL GIWNFTNPGVVSHNEILEMYK +I+P   
Sbjct: 556 RYNKVVDIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKNYIEPGFK 615

Query: 246 WKNFSLEEQAKVIVAPRSNNEMDATKLKTEFPELLSIKDSLVKHVFKPNQKT 297
           W NF++EEQAKVIVA RSNNEMD +KL  EFPE+LSIK+SL+K+VF+PN++T
Sbjct: 616 WSNFTVEEQAKVIVAARSNNEMDGSKLSKEFPEMLSIKESLLKYVFEPNKRT 667

[Close]

BLAST of Carg02499 vs. Swiss-Prot
Match: sp|Q5UPS5|YL780_MIMIV (Uncharacterized protein L780 OS=Acanthamoeba polyphaga mimivirus OX=212035 GN=MIMI_L780 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 7.5e-57
Identity = 115/286 (40.21%), Postives = 178/286 (62.24%), Query Frame = 0


Query: 12  LKFLIYGRTGWIGGLLGQLCQQQGIDFVYGSGRLENRTSLEADIAAVKPTHVFNAAGVT- 71
           +K+LI+G  GWIG ++ ++ +QQG   V    R ++ +++E +I+ +KP  V +  G T 
Sbjct: 1   MKWLIFGNKGWIGSMVSKILEQQGEQVVGAQSRADDESAVEREISEIKPDRVMSFIGRTH 60

Query: 72  --GRPNVDWCE--SHKVETIRTNVVGTLNLADVCRERGLILINYATGCIFEYDSAHPLNS 131
             G   +D+ E     VE ++ N+ G L LA +C++  + L    TGCIFE  +    + 
Sbjct: 61  GPGYSTIDYLEQSGKLVENVKDNLYGPLCLAFICQKYNIHLTYLGTGCIFEGQNNFSADE 120

Query: 132 GIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYEN-VCTLRVRMPISSDLSNPRNFITKITR 191
             GF E++ PNF GS YS  K   + L+  ++N V  LR+RMPI+ +  NPR+FITKI  
Sbjct: 121 K-GFTENDKPNFFGSSYSVVKGFTDRLMHFFDNDVLNLRIRMPITIE-QNPRSFITKILS 180

Query: 192 YEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFIDPNLTW 251
           Y ++  IPNSMTILD+++P+ I+MA+   TG +NFTNPG+VSHNEIL + +    PNLTW
Sbjct: 181 YSRICSIPNSMTILDQMIPVMIDMARNKTTGTFNFTNPGLVSHNEILSLIRDIHKPNLTW 240

Query: 252 KNFSLEEQAKVIVAPRSNNEMDATKLKTEFPELLSIKDSLVKHVFK 292
           +N S E+Q  ++ A RSNN ++  KL++ +P++  I   + + V K
Sbjct: 241 ENMSREQQLAILKADRSNNLLNTDKLQSLYPDVPDILTGIREVVSK 284

[Close]

BLAST of Carg02499 vs. TrEMBL
Match: tr|A0A1S3AU07|A0A1S3AU07_CUCME (bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase OS=Cucumis melo OX=3656 GN=LOC103482697 PE=4 SV=1)

HSP 1 Score: 580.9 bits (1496), Expect = 1.7e-162
Identity = 285/300 (95.00%), Postives = 290/300 (96.67%), Query Frame = 0


Query: 1   MGILADSGSG-PLKFLIYGRTGWIGGLLGQLCQQQGIDFVYGSGRLENRTSLEADIAAVK 60
           MGILADSGSG  LKFLIYGRTGWIGGLLG LCQQQGIDF YGSGRLENR SLEADIAAVK
Sbjct: 1   MGILADSGSGSSLKFLIYGRTGWIGGLLGHLCQQQGIDFTYGSGRLENRASLEADIAAVK 60

Query: 61  PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLNLADVCRERGLILINYATGCIFEYD 120
           PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTL LADVCRERGLILINYATGCIFEYD
Sbjct: 61  PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCRERGLILINYATGCIFEYD 120

Query: 121 SAHPLNSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF 180
           SAHP+NSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF
Sbjct: 121 SAHPINSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF 180

Query: 181 ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI 240
           ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI
Sbjct: 181 ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI 240

Query: 241 DPNLTWKNFSLEEQAKVIVAPRSNNEMDATKLKTEFPELLSIKDSLVKHVFKPNQKTCAA 300
           DPN TWKNF+LEEQAKVIVAPRSNNE+DATKLK EFPELLSIKDSL+K+VFKPNQKT  A
Sbjct: 241 DPNFTWKNFNLEEQAKVIVAPRSNNELDATKLKNEFPELLSIKDSLLKYVFKPNQKTPTA 300

[Close]

BLAST of Carg02499 vs. TrEMBL
Match: tr|A0A0A0KMP5|A0A0A0KMP5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G156140 PE=4 SV=1)

HSP 1 Score: 575.1 bits (1481), Expect = 9.2e-161
Identity = 281/300 (93.67%), Postives = 289/300 (96.33%), Query Frame = 0


Query: 1   MGILADSGS-GPLKFLIYGRTGWIGGLLGQLCQQQGIDFVYGSGRLENRTSLEADIAAVK 60
           MGILADSGS   LKFLIYGRTGWIGGLLG LCQ+QGIDF YGSGRLENR SLEADIAAV 
Sbjct: 1   MGILADSGSVSTLKFLIYGRTGWIGGLLGHLCQKQGIDFTYGSGRLENRASLEADIAAVN 60

Query: 61  PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLNLADVCRERGLILINYATGCIFEYD 120
           PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTL+LADVCRERGLILINYATGCIFEYD
Sbjct: 61  PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYD 120

Query: 121 SAHPLNSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF 180
           SAHP+NSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF
Sbjct: 121 SAHPINSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF 180

Query: 181 ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI 240
           ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI
Sbjct: 181 ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI 240

Query: 241 DPNLTWKNFSLEEQAKVIVAPRSNNEMDATKLKTEFPELLSIKDSLVKHVFKPNQKTCAA 300
           DPN TWKNF+L+EQAKVIVAPRSNNE+DATKLK EFPELLSIKDSL+K+VFKPNQKT  A
Sbjct: 241 DPNFTWKNFTLDEQAKVIVAPRSNNELDATKLKNEFPELLSIKDSLIKYVFKPNQKTPTA 300

[Close]

BLAST of Carg02499 vs. TrEMBL
Match: tr|A0A067FK86|A0A067FK86_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g022112mg PE=4 SV=1)

HSP 1 Score: 550.1 bits (1416), Expect = 3.2e-153
Identity = 261/292 (89.38%), Postives = 282/292 (96.58%), Query Frame = 0


Query: 5   ADSGSGPLKFLIYGRTGWIGGLLGQLCQQQGIDFVYGSGRLENRTSLEADIAAVKPTHVF 64
           +D+GS PLKFLIYGRTGWIGGLLG+LCQ Q IDF YGSGRLENR SLEADIAAVKPTHVF
Sbjct: 8   SDAGSKPLKFLIYGRTGWIGGLLGKLCQAQSIDFTYGSGRLENRASLEADIAAVKPTHVF 67

Query: 65  NAAGVTGRPNVDWCESHKVETIRTNVVGTLNLADVCRERGLILINYATGCIFEYDSAHPL 124
           NAAGVTGRPNVDWCESHKVETIRTNVVGTL LADVCR++GLILINYATGCIFEYDS HPL
Sbjct: 68  NAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCRDKGLILINYATGCIFEYDSGHPL 127

Query: 125 NSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKIT 184
            SGIGFKE++ PNF+GSFYSKTKAMVE+LLKN+ENVCTLRVRMPISSDLSNPRNFITKIT
Sbjct: 128 GSGIGFKEEDTPNFVGSFYSKTKAMVEELLKNFENVCTLRVRMPISSDLSNPRNFITKIT 187

Query: 185 RYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFIDPNLT 244
           RYEKVV+IPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMY+Q+IDPN T
Sbjct: 188 RYEKVVNIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYRQYIDPNFT 247

Query: 245 WKNFSLEEQAKVIVAPRSNNEMDATKLKTEFPELLSIKDSLVKHVFKPNQKT 297
           WKNF+LEEQAKVIVAPRSNNE+DA+KLKTEFPELLSIK+SL+K+VF+PN+KT
Sbjct: 248 WKNFTLEEQAKVIVAPRSNNELDASKLKTEFPELLSIKESLIKYVFEPNKKT 299

[Close]

BLAST of Carg02499 vs. TrEMBL
Match: tr|V4T0T1|V4T0T1_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10021340mg PE=4 SV=1)

HSP 1 Score: 548.5 bits (1412), Expect = 9.2e-153
Identity = 260/292 (89.04%), Postives = 282/292 (96.58%), Query Frame = 0


Query: 5   ADSGSGPLKFLIYGRTGWIGGLLGQLCQQQGIDFVYGSGRLENRTSLEADIAAVKPTHVF 64
           +D+GS PLKFLIYGRTGWIGGLLG+LCQ Q IDF YGSGRLENR SLEADIAAVKPTHVF
Sbjct: 8   SDAGSKPLKFLIYGRTGWIGGLLGKLCQAQSIDFTYGSGRLENRASLEADIAAVKPTHVF 67

Query: 65  NAAGVTGRPNVDWCESHKVETIRTNVVGTLNLADVCRERGLILINYATGCIFEYDSAHPL 124
           NAAGVTGRPNVDWCESHKVETIRTNVVGTL LADVCR++GLILINYATGCIFEYDS HPL
Sbjct: 68  NAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCRDKGLILINYATGCIFEYDSGHPL 127

Query: 125 NSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKIT 184
            SGIGFKE++ PNF+GSFYSKTKAMVE+LLKN+ENVCTLRVRMPISSDLSNPRNFITKIT
Sbjct: 128 GSGIGFKEEDTPNFVGSFYSKTKAMVEELLKNFENVCTLRVRMPISSDLSNPRNFITKIT 187

Query: 185 RYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFIDPNLT 244
           RYEKVV+IPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILE+Y+Q+IDPN T
Sbjct: 188 RYEKVVNIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEIYRQYIDPNFT 247

Query: 245 WKNFSLEEQAKVIVAPRSNNEMDATKLKTEFPELLSIKDSLVKHVFKPNQKT 297
           WKNF+LEEQAKVIVAPRSNNE+DA+KLKTEFPELLSIK+SL+K+VF+PN+KT
Sbjct: 248 WKNFTLEEQAKVIVAPRSNNELDASKLKTEFPELLSIKESLIKYVFEPNKKT 299

[Close]

BLAST of Carg02499 vs. TrEMBL
Match: tr|A0A2I4HE98|A0A2I4HE98_9ROSI (bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase OS=Juglans regia OX=51240 GN=LOC109016533 PE=4 SV=1)

HSP 1 Score: 542.3 bits (1396), Expect = 6.6e-151
Identity = 257/302 (85.10%), Postives = 281/302 (93.05%), Query Frame = 0


Query: 1   MGILADSGSG---PLKFLIYGRTGWIGGLLGQLCQQQGIDFVYGSGRLENRTSLEADIAA 60
           MG  A+  S    P KFLIYGRTGWIGGLLG+LC+ QGIDF YGSGRLE+R SLEAD+AA
Sbjct: 1   MGFPANGASATDKPYKFLIYGRTGWIGGLLGRLCESQGIDFTYGSGRLEDRASLEADLAA 60

Query: 61  VKPTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLNLADVCRERGLILINYATGCIFE 120
           VKPTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTL LADVCRE+GL+LINYATGCIFE
Sbjct: 61  VKPTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCREKGLVLINYATGCIFE 120

Query: 121 YDSAHPLNSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPR 180
           YDS HPL SG+GFKE++ PNF+GSFYSKTKAMVE+LLKNY+NVCTLRVRMPISSDLSNPR
Sbjct: 121 YDSGHPLGSGVGFKEEDTPNFVGSFYSKTKAMVEELLKNYDNVCTLRVRMPISSDLSNPR 180

Query: 181 NFITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQ 240
           NFITKITRYEKVV+IPNSMTILDELLPISIEM KRNLTGIWNFTNPGVVSHNEILEMY++
Sbjct: 181 NFITKITRYEKVVNIPNSMTILDELLPISIEMGKRNLTGIWNFTNPGVVSHNEILEMYRE 240

Query: 241 FIDPNLTWKNFSLEEQAKVIVAPRSNNEMDATKLKTEFPELLSIKDSLVKHVFKPNQKTC 300
           +IDPN TWKNF+LEEQAKVI+APRSNNE+DA+KLK EFPELLSIK+SL+K+VFKPNQKT 
Sbjct: 241 YIDPNFTWKNFNLEEQAKVIIAPRSNNELDASKLKAEFPELLSIKESLIKYVFKPNQKTA 300

The following BLAST results are available for this feature:

BLAST of Carg02499 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022958450.1	1.1e-170	99.67	bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reducta...	[more]
XP_008437195.1	2.5e-162	95.00	PREDICTED: bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamn...	[more]
XP_023549712.1	3.7e-161	93.67	bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reducta...	[more]
XP_022922271.1	6.2e-161	93.67	bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reducta...	[more]
XP_022969861.1	8.2e-161	93.67	bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reducta...	[more]

BLAST of Carg02499 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G63000.1	4.1e-146	83.45	nucleotide-rhamnose synthase/epimerase-reductase	[more]
AT1G78570.1	1.7e-136	78.95	rhamnose biosynthesis 1	[more]
AT3G14790.1	2.9e-136	78.25	rhamnose biosynthesis 3	[more]
AT1G53500.1	3.2e-135	76.37	NAD-dependent epimerase/dehydratase family protein	[more]
AT5G59290.2	3.0e-08	25.70	UDP-glucuronic acid decarboxylase 3	[more]

BLAST of Carg02499 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LQ04\|RMLCD_ARATH	7.3e-145	83.45	Bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reducta...	[more]
sp\|Q9SYM5\|RHM1_ARATH	3.1e-135	78.95	Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epime...	[more]
sp\|Q9LH76\|RHM3_ARATH	5.2e-135	78.25	Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epime...	[more]
sp\|Q9LPG6\|RHM2_ARATH	5.8e-134	76.37	Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epime...	[more]
sp\|Q5UPS5\|YL780_MIMIV	7.5e-57	40.21	Uncharacterized protein L780 OS=Acanthamoeba polyphaga mimivirus OX=212035 GN=MI...	[more]

BLAST of Carg02499 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AU07\|A0A1S3AU07_CUCME	1.7e-162	95.00	bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reducta...	[more]
tr\|A0A0A0KMP5\|A0A0A0KMP5_CUCSA	9.2e-161	93.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G156140 PE=4 SV=1	[more]
tr\|A0A067FK86\|A0A067FK86_CITSI	3.2e-153	89.38	Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g022112mg PE=4 SV=1	[more]
tr\|V4T0T1\|V4T0T1_9ROSI	9.2e-153	89.04	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10021340mg PE=4 ...	[more]
tr\|A0A2I4HE98\|A0A2I4HE98_9ROSI	6.6e-151	85.10	bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reducta...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR036291	NAD(P)-bd_dom_sf
IPR029903	RmlD-like-bd

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg02499-RA	Carg02499-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.40.50.720		coord: 7..298 e-value: 1.3E-82 score: 279.6
None	No IPR available	PANTHER	PTHR10366:SF405	BIFUNCTIONAL DTDP-4-DEHYDRORHAMNOSE 3,5-EPIMERASE/DTDP-4-DEHYDRORHAMNOSE REDUCTASE	coord: 9..296
None	No IPR available	PANTHER	PTHR10366	NAD DEPENDENT EPIMERASE/DEHYDRATASE	coord: 9..296
None	No IPR available	CDD	cd05254	dTDP_HR_like_SDR_e	coord: 13..285 e-value: 6.39342E-61 score: 196.308
IPR029903	RmlD-like substrate binding domain	PFAM	PF04321	RmlD_sub_bind	coord: 13..186 e-value: 1.4E-14 score: 53.8
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	SSF51735	NAD(P)-binding Rossmann-fold domains	coord: 12..286

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg02499	Cla011497	Watermelon (97103) v1	carwmB0925
Carg02499	Csa5G156140	Cucumber (Chinese Long) v2	carcuB0939
Carg02499	MELO3C005621	Melon (DHL92) v3.5.1	carmeB0903
Carg02499	ClCG01G003220	Watermelon (Charleston Gray)	carwcgB0898
Carg02499	CSPI05G05960	Wild cucumber (PI 183967)	carcpiB0961
Carg02499	Cucsa.302670	Cucumber (Gy14) v1	carcgyB1043
Carg02499	CmaCh02G014910	Cucurbita maxima (Rimu)	carcmaB1268
Carg02499	CmaCh15G011900	Cucurbita maxima (Rimu)	carcmaB1261
Carg02499	CmoCh02G015300	Cucurbita moschata (Rifu)	carcmoB1237
Carg02499	CmoCh15G012530	Cucurbita moschata (Rifu)	carcmoB1230
Carg02499	Lsi09G003180	Bottle gourd (USVL1VR-Ls)	carlsiB836
Carg02499	Cp4.1LG13g01860	Cucurbita pepo (Zucchini)	carcpeB1271
Carg02499	Cp4.1LG05g03780	Cucurbita pepo (Zucchini)	carcpeB1282
Carg02499	CsGy5G003240	Cucumber (Gy14) v2	carcgybB0912
Carg02499	MELO3C005621.2	Melon (DHL92) v3.6.1	carmedB0910
Carg02499	CsaV3_5G003330	Cucumber (Chinese Long) v3	carcucB0963
Carg02499	Cla97C01G003310	Watermelon (97103) v2	carwmbB0963
Carg02499	Bhi12G000181	Wax gourd	carwgoB1059

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg02499	Carg16664	Silver-seed gourd	carcarB643

The following block(s) are covering this gene:


Gene	Organism	Block
Carg02499	Cucumber (Gy14) v2	carcgybB0906
Carg02499	Cucumber (Gy14) v2	carcgybB0913
Carg02499	Cucumber (Gy14) v1	carcgyB1042
Carg02499	Cucurbita maxima (Rimu)	carcmaB1264
Carg02499	Cucurbita moschata (Rifu)	carcmoB1234
Carg02499	Cucurbita pepo (Zucchini)	carcpeB1267
Carg02499	Cucurbita pepo (Zucchini)	carcpeB1272
Carg02499	Wild cucumber (PI 183967)	carcpiB0955
Carg02499	Wild cucumber (PI 183967)	carcpiB0962
Carg02499	Cucumber (Chinese Long) v2	carcuB0933
Carg02499	Cucumber (Chinese Long) v2	carcuB0940
Carg02499	Cucumber (Chinese Long) v3	carcucB0956
Carg02499	Cucumber (Chinese Long) v3	carcucB0964
Carg02499	Bottle gourd (USVL1VR-Ls)	carlsiB841
Carg02499	Bottle gourd (USVL1VR-Ls)	carlsiB837
Carg02499	Melon (DHL92) v3.5.1	carmeB0911
Carg02499	Melon (DHL92) v3.6.1	carmedB0918
Carg02499	Watermelon (Charleston Gray)	carwcgB0899
Carg02499	Watermelon (Charleston Gray)	carwcgB0903
Carg02499	Watermelon (97103) v1	carwmB0920
Carg02499	Watermelon (97103) v1	carwmB0926
Carg02499	Watermelon (97103) v2	carwmbB0969
Carg02499	Wax gourd	carwgoB1065