Carg02483 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg02483
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	S-adenosyl-L-methionine-dependent methyltransferase
Location	Cucurbita_argyrosperma_scaffold_009 : 210207 .. 210956 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGCTTGTTTGGTCCCCTGAGATGGCTTCCAAAGCCTACATCGACACCGTCCAATCTGTAAGAAATCTCCTTTGATTTCAAATTTCTGTTTCGTTTTTTTTTTTTTTTTTGGCGTGTTTATGATTGATGTTTTTCAGTTGTGTGTGAACTGTGAAGTGCGATCTCCATACAGAATCCGGCGTTGCGGAATTGATTTCGGCGATGGCGGCCGGATGGAACGCTCAATTCATCGTCGAGACGTGGTCGAGCGGCGGAGCGATTGCAACGAGTATTGGACTGGCGGTTGCTCGCCGGCACACAGGAGGGAGACACGTGTGTGTGGTGCCGGACGAGAGATCGAGAGGAGAATATTGGAGAGCGATGGAGAGAGCGGGATTGGCGCCGGAAATGATCGTGAGAGAGCCGGAGGAGGAGATGGGAGGACTGGTAGGGATAGATTTTCTGGTGGTGAATAGTGAGAGGAGGAATTTCAGTCGAGTTCTGAAAATGGCGAATCTGAGTTCCAGAGGAGCGGTTTTGATCTGCAAGAACGCGAACTCGAGAAGCGATTCGAGTTTCAGATGGAGTAATGTTACCAATAACGGAACGCGGCGGCTGATTCGATCAGCGTTTTTGCCGGTGGGGCAGGGATTGGATATTGCATACGTGGCGGCGGAAGGAAGGAATTCAGGTTCCGGCGAGGGGAAGGGGAAATGGATCAAGCAGGTTGATCGACGATCAGGGGAGGAGTTTGTGATTCGGAAGTGA

mRNA sequence

ATGAAGCTTGTTTGGTCCCCTGAGATGGCTTCCAAAGCCTACATCGACACCGTCCAATCTTGCGATCTCCATACAGAATCCGGCGTTGCGGAATTGATTTCGGCGATGGCGGCCGGATGGAACGCTCAATTCATCGTCGAGACGTGGTCGAGCGGCGGAGCGATTGCAACGAGTATTGGACTGGCGGTTGCTCGCCGGCACACAGGAGGGAGACACGTGTGTGTGGTGCCGGACGAGAGATCGAGAGGAGAATATTGGAGAGCGATGGAGAGAGCGGGATTGGCGCCGGAAATGATCGTGAGAGAGCCGGAGGAGGAGATGGGAGGACTGGTAGGGATAGATTTTCTGGTGGTGAATAGTGAGAGGAGGAATTTCAGTCGAGTTCTGAAAATGGCGAATCTGAGTTCCAGAGGAGCGGTTTTGATCTGCAAGAACGCGAACTCGAGAAGCGATTCGAGTTTCAGATGGAGTAATGTTACCAATAACGGAACGCGGCGGCTGATTCGATCAGCGTTTTTGCCGGTGGGGCAGGGATTGGATATTGCATACGTGGCGGCGGAAGGAAGGAATTCAGGTTCCGGCGAGGGGAAGGGGAAATGGATCAAGCAGGTTGATCGACGATCAGGGGAGGAGTTTGTGATTCGGAAGTGA

Coding sequence (CDS)

ATGAAGCTTGTTTGGTCCCCTGAGATGGCTTCCAAAGCCTACATCGACACCGTCCAATCTTGCGATCTCCATACAGAATCCGGCGTTGCGGAATTGATTTCGGCGATGGCGGCCGGATGGAACGCTCAATTCATCGTCGAGACGTGGTCGAGCGGCGGAGCGATTGCAACGAGTATTGGACTGGCGGTTGCTCGCCGGCACACAGGAGGGAGACACGTGTGTGTGGTGCCGGACGAGAGATCGAGAGGAGAATATTGGAGAGCGATGGAGAGAGCGGGATTGGCGCCGGAAATGATCGTGAGAGAGCCGGAGGAGGAGATGGGAGGACTGGTAGGGATAGATTTTCTGGTGGTGAATAGTGAGAGGAGGAATTTCAGTCGAGTTCTGAAAATGGCGAATCTGAGTTCCAGAGGAGCGGTTTTGATCTGCAAGAACGCGAACTCGAGAAGCGATTCGAGTTTCAGATGGAGTAATGTTACCAATAACGGAACGCGGCGGCTGATTCGATCAGCGTTTTTGCCGGTGGGGCAGGGATTGGATATTGCATACGTGGCGGCGGAAGGAAGGAATTCAGGTTCCGGCGAGGGGAAGGGGAAATGGATCAAGCAGGTTGATCGACGATCAGGGGAGGAGTTTGTGATTCGGAAGTGA

Protein sequence

MKLVWSPEMASKAYIDTVQSCDLHTESGVAELISAMAAGWNAQFIVETWSSGGAIATSIGLAVARRHTGGRHVCVVPDERSRGEYWRAMERAGLAPEMIVREPEEEMGGLVGIDFLVVNSERRNFSRVLKMANLSSRGAVLICKNANSRSDSSFRWSNVTNNGTRRLIRSAFLPVGQGLDIAYVAAEGRNSGSGEGKGKWIKQVDRRSGEEFVIRK

Homology

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BLAST of Carg02483 vs. NCBI nr
Match: XP_022958256.1 (uncharacterized protein LOC111459536 isoform X1 [Cucurbita moschata])

HSP 1 Score: 427.9 bits (1099), Expect = 2.0e-116
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MKLVWSPEMASKAYIDTVQSCDLHTESGVAELISAMAAGWNAQFIVETWSSGGAIATSIG 60
           MKLVWSPEMASKAYIDTVQSCDLHTESGVAELISAMAAGWNAQFIVETWSSGGAIATSIG
Sbjct: 1   MKLVWSPEMASKAYIDTVQSCDLHTESGVAELISAMAAGWNAQFIVETWSSGGAIATSIG 60

Query: 61  LAVARRHTGGRHVCVVPDERSRGEYWRAMERAGLAPEMIVREPEEEMGGLVGIDFLVVNS 120
           LAVARRHTGGRHVCVVPDERSRGEYWRAMERAGLAPEMIVREPEEEMGGLVGIDFLVVNS
Sbjct: 61  LAVARRHTGGRHVCVVPDERSRGEYWRAMERAGLAPEMIVREPEEEMGGLVGIDFLVVNS 120

Query: 121 ERRNFSRVLKMANLSSRGAVLICKNANSRSDSSFRWSNVTNNGTRRLIRSAFLPVGQGLD 180
           ERRNFSRVLKMANLSSRGAVLICKNANSRSDSSFRWSNVTNNGTRRLIRSAFLPVGQGLD
Sbjct: 121 ERRNFSRVLKMANLSSRGAVLICKNANSRSDSSFRWSNVTNNGTRRLIRSAFLPVGQGLD 180

Query: 181 IAYVAAEGRNSGSGEGKGKWIKQVDRRSGEEFVIRK 217
           IAYVAAEGRNSGSGEGKGKWIKQVDRRSGEEFVIRK
Sbjct: 181 IAYVAAEGRNSGSGEGKGKWIKQVDRRSGEEFVIRK 216

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BLAST of Carg02483 vs. NCBI nr
Match: XP_023533857.1 (uncharacterized protein LOC111795581 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 418.3 bits (1074), Expect = 1.6e-113
Identity = 213/216 (98.61%), Postives = 214/216 (99.07%), Query Frame = 0


Query: 1   MKLVWSPEMASKAYIDTVQSCDLHTESGVAELISAMAAGWNAQFIVETWSSGGAIATSIG 60
           MKLVWSPEMASKAYIDTVQSCDLHTESGVAELISAMAAG NAQFIVETWSSGGAIATSIG
Sbjct: 1   MKLVWSPEMASKAYIDTVQSCDLHTESGVAELISAMAAGRNAQFIVETWSSGGAIATSIG 60

Query: 61  LAVARRHTGGRHVCVVPDERSRGEYWRAMERAGLAPEMIVREPEEEMGGLVGIDFLVVNS 120
           LAVARRHTGGRHVCVVPDERSRGEYWRAMERAGLAPE+IVREPEE MGGLVGIDFLVVNS
Sbjct: 61  LAVARRHTGGRHVCVVPDERSRGEYWRAMERAGLAPEVIVREPEEVMGGLVGIDFLVVNS 120

Query: 121 ERRNFSRVLKMANLSSRGAVLICKNANSRSDSSFRWSNVTNNGTRRLIRSAFLPVGQGLD 180
           ERRNFSRVLKMANLSSRGAVLICKNANSRSDSSFRWSNVTNNGTRRLIRSAFLPVGQGLD
Sbjct: 121 ERRNFSRVLKMANLSSRGAVLICKNANSRSDSSFRWSNVTNNGTRRLIRSAFLPVGQGLD 180

Query: 181 IAYVAAEGRNSGSGEGKGKWIKQVDRRSGEEFVIRK 217
           IAYVAAEGRNSGSGEGKGKWIKQVDRRSGEEFVIRK
Sbjct: 181 IAYVAAEGRNSGSGEGKGKWIKQVDRRSGEEFVIRK 216

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BLAST of Carg02483 vs. NCBI nr
Match: XP_022996438.1 (uncharacterized protein LOC111491663 isoform X1 [Cucurbita maxima])

HSP 1 Score: 414.8 bits (1065), Expect = 1.7e-112
Identity = 211/216 (97.69%), Postives = 213/216 (98.61%), Query Frame = 0


Query: 1   MKLVWSPEMASKAYIDTVQSCDLHTESGVAELISAMAAGWNAQFIVETWSSGGAIATSIG 60
           MKLVWSP+ ASKAYIDTVQSCDLHTESGVAELISAMAAG NAQFIVETWSSGGAIATSIG
Sbjct: 1   MKLVWSPDTASKAYIDTVQSCDLHTESGVAELISAMAAGRNAQFIVETWSSGGAIATSIG 60

Query: 61  LAVARRHTGGRHVCVVPDERSRGEYWRAMERAGLAPEMIVREPEEEMGGLVGIDFLVVNS 120
           LAVARRHTGGRHVCVVPDERSRGEYWRAMERAGLAPE+IVREPEE MGGLVGIDFLVVNS
Sbjct: 61  LAVARRHTGGRHVCVVPDERSRGEYWRAMERAGLAPEVIVREPEEVMGGLVGIDFLVVNS 120

Query: 121 ERRNFSRVLKMANLSSRGAVLICKNANSRSDSSFRWSNVTNNGTRRLIRSAFLPVGQGLD 180
           ERRNFSRVLKMANLSSRGAVLICKNANSRSDSSFRWSNVTNNGTRRLIRSAFLPVGQGLD
Sbjct: 121 ERRNFSRVLKMANLSSRGAVLICKNANSRSDSSFRWSNVTNNGTRRLIRSAFLPVGQGLD 180

Query: 181 IAYVAAEGRNSGSGEGKGKWIKQVDRRSGEEFVIRK 217
           IAYVAAEGRNSGSGEGKGKWIKQVDRRSGEEFVIRK
Sbjct: 181 IAYVAAEGRNSGSGEGKGKWIKQVDRRSGEEFVIRK 216

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BLAST of Carg02483 vs. NCBI nr
Match: XP_008437151.1 (PREDICTED: uncharacterized protein LOC103482660 isoform X2 [Cucumis melo])

HSP 1 Score: 381.3 bits (978), Expect = 2.1e-102
Identity = 194/216 (89.81%), Postives = 203/216 (93.98%), Query Frame = 0


Query: 1   MKLVWSPEMASKAYIDTVQSCDLHTESGVAELISAMAAGWNAQFIVETWSSGGAIATSIG 60
           MKLVWSPE ASKAYIDTVQSCDLH ESGVAELISAMAAGWNAQFIVETWSSGGAIATSIG
Sbjct: 1   MKLVWSPETASKAYIDTVQSCDLHQESGVAELISAMAAGWNAQFIVETWSSGGAIATSIG 60

Query: 61  LAVARRHTGGRHVCVVPDERSRGEYWRAMERAGLAPEMIVREPEEEMGGLVGIDFLVVNS 120
           LAVARRH GGRHVCVVPDERSRGEY RAMERAGL+PE+IV EPEE M GLVGIDFLVV+S
Sbjct: 61  LAVARRHVGGRHVCVVPDERSRGEYSRAMERAGLSPEVIVGEPEEVMEGLVGIDFLVVDS 120

Query: 121 ERRNFSRVLKMANLSSRGAVLICKNANSRSDSSFRWSNVTNNGTRRLIRSAFLPVGQGLD 180
           +RRNFSRVLK+ANLSSRGAVLICKNANSRSDSSFRW +VT NGTRRL+RSAFLPVG+GLD
Sbjct: 121 QRRNFSRVLKLANLSSRGAVLICKNANSRSDSSFRWKSVTENGTRRLVRSAFLPVGKGLD 180

Query: 181 IAYVAAEGRNSGSGEGKGKWIKQVDRRSGEEFVIRK 217
           IA+VAA G NSGSG GKGKWIK VDRRSGEEFVIRK
Sbjct: 181 IAHVAAAGGNSGSGGGKGKWIKHVDRRSGEEFVIRK 216

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BLAST of Carg02483 vs. NCBI nr
Match: XP_004147575.1 (PREDICTED: uncharacterized protein LOC101211926 isoform X2 [Cucumis sativus] >KGN50198.1 hypothetical protein Csa_5G158540 [Cucumis sativus])

HSP 1 Score: 379.4 bits (973), Expect = 8.1e-102
Identity = 193/216 (89.35%), Postives = 203/216 (93.98%), Query Frame = 0


Query: 1   MKLVWSPEMASKAYIDTVQSCDLHTESGVAELISAMAAGWNAQFIVETWSSGGAIATSIG 60
           MKLVWSPE ASKAYIDTVQSCDLH ESGVAELISAMAAGWNAQFIVETWS+GGAIATSIG
Sbjct: 1   MKLVWSPETASKAYIDTVQSCDLHQESGVAELISAMAAGWNAQFIVETWSTGGAIATSIG 60

Query: 61  LAVARRHTGGRHVCVVPDERSRGEYWRAMERAGLAPEMIVREPEEEMGGLVGIDFLVVNS 120
           LAVARRH GGRHVCVVPDERSRGEY RAMERAGL+PE+IV EPEE M GLVGIDFLVV+S
Sbjct: 61  LAVARRHVGGRHVCVVPDERSRGEYSRAMERAGLSPEVIVGEPEEVMEGLVGIDFLVVDS 120

Query: 121 ERRNFSRVLKMANLSSRGAVLICKNANSRSDSSFRWSNVTNNGTRRLIRSAFLPVGQGLD 180
           +RRNFSRVLK+ANLSSRGAVLICKNANSRSDSSFRW +VT NGTRRL+RSAFLPVG+GLD
Sbjct: 121 QRRNFSRVLKLANLSSRGAVLICKNANSRSDSSFRWISVTENGTRRLVRSAFLPVGKGLD 180

Query: 181 IAYVAAEGRNSGSGEGKGKWIKQVDRRSGEEFVIRK 217
           IA+VAA G NSGSG GKGKWIK VDRRSGEEFVIRK
Sbjct: 181 IAHVAAAGGNSGSGGGKGKWIKHVDRRSGEEFVIRK 216

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BLAST of Carg02483 vs. TAIR10
Match: AT2G45360.1 (Protein of unknown function (DUF1442))

HSP 1 Score: 230.7 bits (587), Expect = 8.4e-61
Identity = 125/218 (57.34%), Postives = 153/218 (70.18%), Query Frame = 0


Query: 1   MKLVWSPEMASKAYIDTVQSCDLHTESGVAELISAMAAGWNAQFIVETWSSGGAIATSIG 60
           MKLVWSPE AS AYIDTV+SC    ESGVAE +SA AAGWNA+ IVETWS G  I TS+G
Sbjct: 1   MKLVWSPETASDAYIDTVKSCKSDKESGVAEFLSATAAGWNARLIVETWSRGDPITTSVG 60

Query: 61  LAVARRHTGGRHVCVVPDERSRGEYWRAMERAGLAPEMIV--REPEEEMGGLVGIDFLVV 120
           LAVA  HTGGRHVC+VPDE+S+ EY  AM R  +  E++V     E  M    G+DFLVV
Sbjct: 61  LAVAATHTGGRHVCIVPDEQSKLEYVLAM-RGFVTTEVVVVGESVENTMEEFPGVDFLVV 120

Query: 121 NSERRNFSRVLKMANLSSRGAVLICKNANSRSDSSFRWSNVTNNGTRRLIRSAFLPVGQG 180
           +S+RR F R L+ A LS++GAVL+CKNA  R+ S F+W +V   GT R++RS FLPVG G
Sbjct: 121 DSKRREFVRTLRFAKLSNKGAVLVCKNAMHRAISGFKWHDVLKRGT-RVVRSVFLPVGSG 180

Query: 181 LDIAYVAAEGRNSGSGEGKGKWIKQVDRRSGEEFVIRK 217
           LDI +V A GR   S   + +WI+ VD  SGEE + R+
Sbjct: 181 LDIVHVGATGRGD-SRNLRSRWIRHVDHLSGEEHLFRR 215

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BLAST of Carg02483 vs. TAIR10
Match: AT3G60780.1 (Protein of unknown function (DUF1442))

HSP 1 Score: 212.2 bits (539), Expect = 3.1e-55
Identity = 110/219 (50.23%), Postives = 145/219 (66.21%), Query Frame = 0


Query: 1   MKLVWSPEMASKAYIDTVQSCDLHTESGVAELISAMAAGWNAQFIVETWSSGGAIATSIG 60
           M+LVWSPE AS AYI TV+SC  + +S VAE +SA AAGWN + IVETWS G  IATS+G
Sbjct: 1   MRLVWSPETASNAYIHTVRSCKSYRDSSVAEFLSATAAGWNTRLIVETWSRGDPIATSVG 60

Query: 61  LAVARRHTGGRHVCVVPDERSRGEYWRAMERAGLAPE---MIVREPEEEMGGLVGIDFLV 120
           LAVA  HT GRHVC+VPDE SR EY   M  A  +     M++   E+ +  + G+DF+V
Sbjct: 61  LAVAAIHTCGRHVCIVPDEESRSEYEAVMRGAVTSDSTEVMVLDSAEDVVERISGVDFMV 120

Query: 121 VNSERRNFSRVLKMANLSSRGAVLICKNANSRSDSSFRWSNVTNNGTRRLIRSAFLPVGQ 180
           V+S+R  F   L +A  S  GAVL+CKNA  +S   F+W  +   GT R++RS FLPVG+
Sbjct: 121 VDSKRHEFVNALGLAKTSKMGAVLVCKNATLKSIPGFKWQGLLRRGT-RVVRSVFLPVGR 180

Query: 181 GLDIAYVAAEGRNSGSGEGKGKWIKQVDRRSGEEFVIRK 217
           GL+I +V A G  +G  +   +WIK +D RSGEE + ++
Sbjct: 181 GLEIVHVGASGGGNGLRKIPSRWIKHIDPRSGEEHLFKR 218

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BLAST of Carg02483 vs. TAIR10
Match: AT1G62840.1 (Protein of unknown function (DUF1442))

HSP 1 Score: 202.6 bits (514), Expect = 2.5e-52
Identity = 116/227 (51.10%), Postives = 152/227 (66.96%), Query Frame = 0


Query: 1   MKLVWSPEMASKAYIDTVQSCDLHTESGVAELISAMAAGWNAQFIVETWSSGGAIATSIG 60
           MKL+WSPE ASKAYIDTV+SC+     G AEL++AMAAGWNA  IVETWS G  IA S+G
Sbjct: 1   MKLIWSPETASKAYIDTVKSCENLGTPGAAELVAAMAAGWNANLIVETWSEGETIAISVG 60

Query: 61  LAVARRHTGGRHVCVVPDERSRGEYWRAMERAGLA--PEMIV-----REPEEEMGGLVGI 120
           L +A RHT GRH+C+VP+ RS+  Y +AM     +  PE I+      E E  M  L GI
Sbjct: 61  LNIASRHTNGRHICIVPNARSQTAYLQAMAEQSCSNLPETIIMNEEGEELEHTMQTLQGI 120

Query: 121 DFLVVNSERRNF-SRVLKMANLSSRGAVLICKNANSRSDSSFRWSNVTNNGTRRLIRSAF 180
           DFLVV+ ++++F + VL+ A   SRGAV++C++   RS S F W+   ++  R ++R+  
Sbjct: 121 DFLVVDWDQKDFAANVLRNAVFGSRGAVVVCRSGYRRSTSCFSWTKAFSD--RNVVRTVT 180

Query: 181 LPVGQGLDIAYVAAEGRNSGSGE---GKGKWIKQVDRRSGEEFVIRK 217
           LPV  GL+IA+VAA  R+SG  +    K KWIK  D+RSGEE VIRK
Sbjct: 181 LPVSGGLEIAHVAA-ARSSGKSDNNSNKRKWIKHFDQRSGEEHVIRK 224

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BLAST of Carg02483 vs. TAIR10
Match: AT1G12320.1 (Protein of unknown function (DUF1442))

HSP 1 Score: 181.0 bits (458), Expect = 7.7e-46
Identity = 108/219 (49.32%), Postives = 140/219 (63.93%), Query Frame = 0


Query: 1   MKLVWSPEMASKAYIDTVQSCDLHTESGVAELISAMAAGWNAQFIVETWSSGGAIATSIG 60
           MKLVWSPE ASKAYIDTV+SC+       AELI+AMAAGWN + IVETWS G AIA+SIG
Sbjct: 1   MKLVWSPETASKAYIDTVKSCENLETPDAAELIAAMAAGWNVKLIVETWSEGDAIASSIG 60

Query: 61  LAVARRHTGGRHVCVVPDERSRGEYWRAMERAGLA---PEMIV-REPEEEMGGLVGIDFL 120
           L VA +H   +H+C+V + RS   Y +A++ +      PE IV  EP + M  L G+DFL
Sbjct: 61  LNVASKHANAKHICIVQNSRSESAYLQAIQESSSPLNFPETIVAEEPGKAMKKLQGVDFL 120

Query: 121 VVNSERRNF-SRVLKMANLSSRGAVLICKNANSRSDSSFRWSNVTNNGTRRLIRSAFLPV 180
           VV+   + F +  LK A   +RGAV++C+N  S      R         R+++R+  LPV
Sbjct: 121 VVDWRNKEFAAAALKNAAFGNRGAVVVCRNGYSSLRRVLR--------DRKVVRTVTLPV 180

Query: 181 GQGLDIAYVAAEGRNSG-SGEGKGKWIKQVDRRSGEEFV 214
             G++IA+VAA  RNSG SG  K +WI  VD+RSGEE V
Sbjct: 181 TGGIEIAHVAA--RNSGKSGNNKRRWITHVDQRSGEEHV 209

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BLAST of Carg02483 vs. TAIR10
Match: AT5G62280.1 (Protein of unknown function (DUF1442))

HSP 1 Score: 60.5 bits (145), Expect = 1.5e-09
Identity = 59/239 (24.69%), Postives = 102/239 (42.68%), Query Frame = 0


Query: 5   WSPEMASKAYIDTVQSCDLHTESGVAELISAMAAGWNAQFIVETWSSGGAIATSIGLAVA 64
           WS E A+KAY+ T+++     E  VAE ISA+AAG +A+ I    +        + L  A
Sbjct: 4   WSAENATKAYLSTLKTDQRTKEPNVAEFISALAAGNSARKIAVACAGAANADILVALIAA 63

Query: 65  RRHTGGRHVCVVPDERSRGEYWRAMERAGLAPEMIVREPEEEMGGLVG------------ 124
              T G+ VCV+          R +E   ++ +M+      ++  +VG            
Sbjct: 64  ANQTRGQVVCVL----------RGIEELIISQKMLEPSEIHQIQFVVGESNDDTLINNHF 123

Query: 125 --IDFLVVNSERRNFSRVL--------KMANLSSRGAVLICKNANSRSDSSFRWSNVTNN 184
              DF++V+    N   ++        + A       V +    N+ S  S+R+S+    
Sbjct: 124 GEADFVLVDCNLENHQEIVGKILNHHEENARTGGGSGVAVVVGYNAFSRGSWRFSDGR-- 183

Query: 185 GTRRLIRSAFLPVGQGL------DIAYVAAEGRNSGSGEGKGKWIKQVDRRSGEEFVIR 216
                 ++ FLP+G+GL      D   +  +  +      K +W+ +VD+ +GEE V R
Sbjct: 184 ------KTQFLPIGEGLLVTRVNDNQKMMMKNHHRDQVMRKSRWVVKVDKCTGEEHVFR 224

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BLAST of Carg02483 vs. TrEMBL
Match: tr|A0A1S3ATG0|A0A1S3ATG0_CUCME (uncharacterized protein LOC103482660 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103482660 PE=4 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 1.4e-102
Identity = 194/216 (89.81%), Postives = 203/216 (93.98%), Query Frame = 0


Query: 1   MKLVWSPEMASKAYIDTVQSCDLHTESGVAELISAMAAGWNAQFIVETWSSGGAIATSIG 60
           MKLVWSPE ASKAYIDTVQSCDLH ESGVAELISAMAAGWNAQFIVETWSSGGAIATSIG
Sbjct: 1   MKLVWSPETASKAYIDTVQSCDLHQESGVAELISAMAAGWNAQFIVETWSSGGAIATSIG 60

Query: 61  LAVARRHTGGRHVCVVPDERSRGEYWRAMERAGLAPEMIVREPEEEMGGLVGIDFLVVNS 120
           LAVARRH GGRHVCVVPDERSRGEY RAMERAGL+PE+IV EPEE M GLVGIDFLVV+S
Sbjct: 61  LAVARRHVGGRHVCVVPDERSRGEYSRAMERAGLSPEVIVGEPEEVMEGLVGIDFLVVDS 120

Query: 121 ERRNFSRVLKMANLSSRGAVLICKNANSRSDSSFRWSNVTNNGTRRLIRSAFLPVGQGLD 180
           +RRNFSRVLK+ANLSSRGAVLICKNANSRSDSSFRW +VT NGTRRL+RSAFLPVG+GLD
Sbjct: 121 QRRNFSRVLKLANLSSRGAVLICKNANSRSDSSFRWKSVTENGTRRLVRSAFLPVGKGLD 180

Query: 181 IAYVAAEGRNSGSGEGKGKWIKQVDRRSGEEFVIRK 217
           IA+VAA G NSGSG GKGKWIK VDRRSGEEFVIRK
Sbjct: 181 IAHVAAAGGNSGSGGGKGKWIKHVDRRSGEEFVIRK 216

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BLAST of Carg02483 vs. TrEMBL
Match: tr|A0A0A0KKR4|A0A0A0KKR4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G158540 PE=4 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 5.4e-102
Identity = 193/216 (89.35%), Postives = 203/216 (93.98%), Query Frame = 0


Query: 1   MKLVWSPEMASKAYIDTVQSCDLHTESGVAELISAMAAGWNAQFIVETWSSGGAIATSIG 60
           MKLVWSPE ASKAYIDTVQSCDLH ESGVAELISAMAAGWNAQFIVETWS+GGAIATSIG
Sbjct: 1   MKLVWSPETASKAYIDTVQSCDLHQESGVAELISAMAAGWNAQFIVETWSTGGAIATSIG 60

Query: 61  LAVARRHTGGRHVCVVPDERSRGEYWRAMERAGLAPEMIVREPEEEMGGLVGIDFLVVNS 120
           LAVARRH GGRHVCVVPDERSRGEY RAMERAGL+PE+IV EPEE M GLVGIDFLVV+S
Sbjct: 61  LAVARRHVGGRHVCVVPDERSRGEYSRAMERAGLSPEVIVGEPEEVMEGLVGIDFLVVDS 120

Query: 121 ERRNFSRVLKMANLSSRGAVLICKNANSRSDSSFRWSNVTNNGTRRLIRSAFLPVGQGLD 180
           +RRNFSRVLK+ANLSSRGAVLICKNANSRSDSSFRW +VT NGTRRL+RSAFLPVG+GLD
Sbjct: 121 QRRNFSRVLKLANLSSRGAVLICKNANSRSDSSFRWISVTENGTRRLVRSAFLPVGKGLD 180

Query: 181 IAYVAAEGRNSGSGEGKGKWIKQVDRRSGEEFVIRK 217
           IA+VAA G NSGSG GKGKWIK VDRRSGEEFVIRK
Sbjct: 181 IAHVAAAGGNSGSGGGKGKWIKHVDRRSGEEFVIRK 216

[Close]

BLAST of Carg02483 vs. TrEMBL
Match: tr|A0A1S3ASZ1|A0A1S3ASZ1_CUCME (uncharacterized protein LOC103482660 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482660 PE=4 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 7.7e-101
Identity = 194/220 (88.18%), Postives = 203/220 (92.27%), Query Frame = 0


Query: 1   MKLVWSPEMASKAYIDTVQS----CDLHTESGVAELISAMAAGWNAQFIVETWSSGGAIA 60
           MKLVWSPE ASKAYIDTVQS    CDLH ESGVAELISAMAAGWNAQFIVETWSSGGAIA
Sbjct: 1   MKLVWSPETASKAYIDTVQSFCVKCDLHQESGVAELISAMAAGWNAQFIVETWSSGGAIA 60

Query: 61  TSIGLAVARRHTGGRHVCVVPDERSRGEYWRAMERAGLAPEMIVREPEEEMGGLVGIDFL 120
           TSIGLAVARRH GGRHVCVVPDERSRGEY RAMERAGL+PE+IV EPEE M GLVGIDFL
Sbjct: 61  TSIGLAVARRHVGGRHVCVVPDERSRGEYSRAMERAGLSPEVIVGEPEEVMEGLVGIDFL 120

Query: 121 VVNSERRNFSRVLKMANLSSRGAVLICKNANSRSDSSFRWSNVTNNGTRRLIRSAFLPVG 180
           VV+S+RRNFSRVLK+ANLSSRGAVLICKNANSRSDSSFRW +VT NGTRRL+RSAFLPVG
Sbjct: 121 VVDSQRRNFSRVLKLANLSSRGAVLICKNANSRSDSSFRWKSVTENGTRRLVRSAFLPVG 180

Query: 181 QGLDIAYVAAEGRNSGSGEGKGKWIKQVDRRSGEEFVIRK 217
           +GLDIA+VAA G NSGSG GKGKWIK VDRRSGEEFVIRK
Sbjct: 181 KGLDIAHVAAAGGNSGSGGGKGKWIKHVDRRSGEEFVIRK 220

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BLAST of Carg02483 vs. TrEMBL
Match: tr|A0A061G4H8|A0A061G4H8_THECC (Ankyrin repeat and KH domain-containing protein 1 OS=Theobroma cacao OX=3641 GN=TCM_016076 PE=4 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 3.0e-84
Identity = 158/216 (73.15%), Postives = 189/216 (87.50%), Query Frame = 0


Query: 1   MKLVWSPEMASKAYIDTVQSCDLHTESGVAELISAMAAGWNAQFIVETWSSGGAIATSIG 60
           MKLVWSPE ASKAYIDTV+SC+L+ ESGVAEL+SAMAAGWNA+FIVETWS GGA  TSIG
Sbjct: 1   MKLVWSPETASKAYIDTVKSCELYHESGVAELVSAMAAGWNARFIVETWSQGGATITSIG 60

Query: 61  LAVARRHTGGRHVCVVPDERSRGEYWRAMERAGLAPEMIVREPEEEMGGLVGIDFLVVNS 120
           LAVA  HT GRHVC+VPDERSR EY +A+E AG++PE+IV EPEE M GL GIDF+VV+S
Sbjct: 61  LAVASSHTNGRHVCIVPDERSRLEYVQALEEAGMSPEVIVGEPEEVMNGLNGIDFMVVDS 120

Query: 121 ERRNFSRVLKMANLSSRGAVLICKNANSRSDSSFRWSNVTNNGTRRLIRSAFLPVGQGLD 180
           +R++FSRVL++A LS+RGAVL+CKNANSRS SSFRW +V ++G+RRL+RS FLPVG+GLD
Sbjct: 121 QRKDFSRVLRLAKLSNRGAVLVCKNANSRSASSFRWRSVIDDGSRRLVRSVFLPVGKGLD 180

Query: 181 IAYVAAEGRNSGSGEGKGKWIKQVDRRSGEEFVIRK 217
           IA+VA  G NSGSG+G+ +WIK VDR+SGE  VIRK
Sbjct: 181 IAHVATSGGNSGSGKGESRWIKHVDRQSGEVHVIRK 216

[Close]

BLAST of Carg02483 vs. TrEMBL
Match: tr|A0A1R3JRE6|A0A1R3JRE6_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_04584 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 1.5e-80
Identity = 155/217 (71.43%), Postives = 184/217 (84.79%), Query Frame = 0


Query: 1   MKLVWSPEMASKAYIDTVQSCDLHTESGVAELISAMAAGWNAQFIVETWSSGGAIATSIG 60
           MKLVWSPE ASKAYIDTV+SC+L+ ESGVAEL+SAMAAGWNA FIVETWS GGA ATS+G
Sbjct: 1   MKLVWSPETASKAYIDTVKSCELYHESGVAELVSAMAAGWNAGFIVETWSQGGATATSVG 60

Query: 61  LAVARRHTGGRHVCVVPDERSRGEYWRAMERAGLAPEMIVREPEEEMGGLVGIDFLVVNS 120
           LAVA  HT GRHVC+VPDE SR EY +A+E AG++PE+IV EPEE M  L GIDFLVV+S
Sbjct: 61  LAVASSHTKGRHVCIVPDENSREEYVQALEEAGMSPEVIVGEPEEVMNELNGIDFLVVDS 120

Query: 121 ERRNFSRVLKMANLSSRGAVLICKNANSRSDSSFRWSNVTNNGTRRLIRSAFLPVGQGLD 180
           +R+ FSRV ++A LS+RGAVL+CKNANSR+ SSFRW +V ++G+RRL+RS FLPVG+GLD
Sbjct: 121 QRKEFSRVFRLAKLSNRGAVLVCKNANSRNASSFRWRSVIDDGSRRLVRSVFLPVGKGLD 180

Query: 181 IAYVAAE-GRNSGSGEGKGKWIKQVDRRSGEEFVIRK 217
           IA+VA   G NS SG+G+ +WIK VDR SGEE VIRK
Sbjct: 181 IAHVATSGGGNSSSGKGERRWIKHVDRESGEEHVIRK 217

The following BLAST results are available for this feature:

BLAST of Carg02483 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022958256.1	2.0e-116	100.00	uncharacterized protein LOC111459536 isoform X1 [Cucurbita moschata]	[more]
XP_023533857.1	1.6e-113	98.61	uncharacterized protein LOC111795581 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022996438.1	1.7e-112	97.69	uncharacterized protein LOC111491663 isoform X1 [Cucurbita maxima]	[more]
XP_008437151.1	2.1e-102	89.81	PREDICTED: uncharacterized protein LOC103482660 isoform X2 [Cucumis melo]	[more]
XP_004147575.1	8.1e-102	89.35	PREDICTED: uncharacterized protein LOC101211926 isoform X2 [Cucumis sativus] >KG...	[more]

BLAST of Carg02483 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G45360.1	8.4e-61	57.34	Protein of unknown function (DUF1442)	[more]
AT3G60780.1	3.1e-55	50.23	Protein of unknown function (DUF1442)	[more]
AT1G62840.1	2.5e-52	51.10	Protein of unknown function (DUF1442)	[more]
AT1G12320.1	7.7e-46	49.32	Protein of unknown function (DUF1442)	[more]
AT5G62280.1	1.5e-09	24.69	Protein of unknown function (DUF1442)	[more]

BLAST of Carg02483 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg02483 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3ATG0\|A0A1S3ATG0_CUCME	1.4e-102	89.81	uncharacterized protein LOC103482660 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A0A0KKR4\|A0A0A0KKR4_CUCSA	5.4e-102	89.35	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G158540 PE=4 SV=1	[more]
tr\|A0A1S3ASZ1\|A0A1S3ASZ1_CUCME	7.7e-101	88.18	uncharacterized protein LOC103482660 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A061G4H8\|A0A061G4H8_THECC	3.0e-84	73.15	Ankyrin repeat and KH domain-containing protein 1 OS=Theobroma cacao OX=3641 GN=...	[more]
tr\|A0A1R3JRE6\|A0A1R3JRE6_COCAP	1.5e-80	71.43	Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_04584 PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR009902	DUF1442

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg02483-RA	Carg02483-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.40.50.150		coord: 8..184 e-value: 7.4E-8 score: 34.1
None	No IPR available	PANTHER	PTHR33593:SF2	F5O11.5	coord: 1..216
IPR009902	Protein of unknown function DUF1442	PFAM	PF07279	DUF1442	coord: 1..216 e-value: 5.0E-87 score: 290.7
IPR009902	Protein of unknown function DUF1442	PANTHER	PTHR33593	FAMILY NOT NAMED	coord: 1..216

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg02483	Cla021312	Watermelon (97103) v1	carwmB0921
Carg02483	Cla011538	Watermelon (97103) v1	carwmB0923
Carg02483	Csa5G158540	Cucumber (Chinese Long) v2	carcuB0937
Carg02483	Csa3G126170	Cucumber (Chinese Long) v2	carcuB0934
Carg02483	MELO3C005581	Melon (DHL92) v3.5.1	carmeB0904
Carg02483	ClCG01G003640	Watermelon (Charleston Gray)	carwcgB0896
Carg02483	CSPI05G06340	Wild cucumber (PI 183967)	carcpiB0959
Carg02483	CSPI03G09590	Wild cucumber (PI 183967)	carcpiB0956
Carg02483	Cucsa.302280	Cucumber (Gy14) v1	carcgyB1044
Carg02483	CmaCh15G011640	Cucurbita maxima (Rimu)	carcmaB1262
Carg02483	CmaCh02G015030	Cucurbita maxima (Rimu)	carcmaB1268
Carg02483	CmoCh02G015440	Cucurbita moschata (Rifu)	carcmoB1237
Carg02483	CmoCh15G012260	Cucurbita moschata (Rifu)	carcmoB1231
Carg02483	CmoCh06G011640	Cucurbita moschata (Rifu)	carcmoB1240
Carg02483	Lsi05G019570	Bottle gourd (USVL1VR-Ls)	carlsiB842
Carg02483	Lsi09G003760	Bottle gourd (USVL1VR-Ls)	carlsiB833
Carg02483	Cp4.1LG14g05710	Cucurbita pepo (Zucchini)	carcpeB1272
Carg02483	Cp4.1LG13g02140	Cucurbita pepo (Zucchini)	carcpeB1269
Carg02483	Cp4.1LG05g03650	Cucurbita pepo (Zucchini)	carcpeB1282
Carg02483	CsGy3G009680	Cucumber (Gy14) v2	carcgybB0907
Carg02483	CsGy5G003650	Cucumber (Gy14) v2	carcgybB0910
Carg02483	MELO3C005581.2	Melon (DHL92) v3.6.1	carmedB0911
Carg02483	CsaV3_5G003760	Cucumber (Chinese Long) v3	carcucB0961
Carg02483	CsaV3_3G009720	Cucumber (Chinese Long) v3	carcucB0957
Carg02483	Cla97C01G003730	Watermelon (97103) v2	carwmbB0961
Carg02483	Bhi12G000351	Wax gourd	carwgoB1060
Carg02483	Bhi01G000183	Wax gourd	carwgoB1066

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg02483	Carg23912	Silver-seed gourd	carcarB475
Carg02483	Carg16691	Silver-seed gourd	carcarB642

The following block(s) are covering this gene:


Gene	Organism	Block
Carg02483	Silver-seed gourd	carcarB633
Carg02483	Silver-seed gourd	carcarB635
Carg02483	Cucumber (Gy14) v2	carcgybB0906
Carg02483	Cucumber (Gy14) v2	carcgybB0913
Carg02483	Cucumber (Gy14) v1	carcgyB1042
Carg02483	Cucumber (Gy14) v1	carcgyB1043
Carg02483	Cucurbita maxima (Rimu)	carcmaB1261
Carg02483	Cucurbita maxima (Rimu)	carcmaB1264
Carg02483	Cucurbita moschata (Rifu)	carcmoB1230
Carg02483	Cucurbita moschata (Rifu)	carcmoB1234
Carg02483	Cucurbita pepo (Zucchini)	carcpeB1267
Carg02483	Cucurbita pepo (Zucchini)	carcpeB1271
Carg02483	Wild cucumber (PI 183967)	carcpiB0955
Carg02483	Wild cucumber (PI 183967)	carcpiB0962
Carg02483	Cucumber (Chinese Long) v2	carcuB0933
Carg02483	Cucumber (Chinese Long) v2	carcuB0940
Carg02483	Cucumber (Chinese Long) v3	carcucB0956
Carg02483	Cucumber (Chinese Long) v3	carcucB0964
Carg02483	Bottle gourd (USVL1VR-Ls)	carlsiB841
Carg02483	Bottle gourd (USVL1VR-Ls)	carlsiB837
Carg02483	Melon (DHL92) v3.5.1	carmeB0903
Carg02483	Melon (DHL92) v3.5.1	carmeB0911
Carg02483	Melon (DHL92) v3.6.1	carmedB0910
Carg02483	Melon (DHL92) v3.6.1	carmedB0918
Carg02483	Watermelon (Charleston Gray)	carwcgB0899
Carg02483	Watermelon (Charleston Gray)	carwcgB0903
Carg02483	Watermelon (97103) v1	carwmB0920
Carg02483	Watermelon (97103) v1	carwmB0926
Carg02483	Watermelon (97103) v2	carwmbB0963
Carg02483	Watermelon (97103) v2	carwmbB0969
Carg02483	Wax gourd	carwgoB1063
Carg02483	Wax gourd	carwgoB1064