Carg02362 (gene) Silver-seed gourd

NameCarg02362
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_007 : 1370273 .. 1373370 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATTTTCTGCAGAACACTGCAATCAACCAAAAAATGCGATCAAAAGAGAAGAAGATGCTGCCAATTTCCGAGTCTGAGGTGTGTCAATCGCTCTCTGTATTTTCGTTCGATCCCGTCGCTCAATTTGACATTTCTCTGTAGATTTTTCACGGAAGACAGTTGCTGTTCGGTCTCTATCTATGTTTTTTTTTTTTTTTTCACTCTGAATCAGTATACATTTTCATGTTCAAGAGCCCATTCATTTTAATATTGCAACTATGCGAAAACGGAGCTTGATTTTGGACTACAAACGATACGAAAAGGAATCACCCGGCTTTATGGAAAGATACAAAGATTAGAAGCCAAATCCATTTGACATTTTAAAAATTTTCCATGTAGTCAACTCCATTTTTATAAATATTGTTTGACTAATTTTTCAGCTTCAGAATCCGACACATGGAATCTTGCTCCCTTTGAAGAGAAGACAACCAGAAGCTTGTTGTCTTTTGATGGACAGAAAAATGTTAGTACTCTGTAATGCTTGATAGACAAAACTTTTTGTTGATGATTGGCTTACACTTGAAAATGTGAGCTCATATAATCTGCATAGTTAGAATTGGGTAATCTGTATTTAGATTGTAGATTTATGATTATGAACGTCTTCTAAGAGTTAAGTTTATATTCATATAGCCTAAGATTTTGGTTTGGCTTCTAAATTTGGGTTTCATAAGTTTAATCTGTGAACTAAACACCCTTTTATGGATAGGTATTACCAGCTAGATTATCTAGAATTAGAAGATTATAGAGTCGGTGTTAAGGAGAACTAATGGGTTGGTTCTACTTGTTAATATGTATTAGAACAATGACGTATACTACAATCCTAAATAGCTGATCTCAAATAGAAAACACCCTTCCATAATAGAATTGATTTCCATATGAAGATTTTTTTTTCTTATAATTTGTCTGTATATGTGCAGCTATTATTGTTCTTCCATATGTCATGCTCTAAAGCTGTTTTGGTTAGTGGTGAATGTATAGAAATATTCAACAATATGGTGATGAATGAACTAGTAACCTGAGAATACAATGATGCTGATAGGTTTCATACTCATTGATTATTCAGAGTGATTATACTGTGATCTTCATGAAATGTAGGGACTAAAATCTTGCTTCCTTATCATTTACTGATAATCATGTGATTTTGGATCTCTACTTTCTGTCATACTAGGTTTGAATTCTTGTGAATTTAAGTTTGTATATTTGATTGTGATAATTAGAAAATTTAGGCCACTGTTAAAGAATTAGGCTTAGTGGGCATCCCATTAATTAGCGTCTTTTCTTCTGCTCGTATTTATTTCTAGATGTTTTGTAGTTTCCTGACAAAGTTTAAAGGGACTAGAAGATGGTTGTGAGGTCCCACATCGGTTGGAGAGGGGAACAAAATATTTTAAAACCGTAGACACATTTTAAAACCTCTCCCTACTTGACACGTTTTAAAACTGTGAAGCTGACAGCGATACGTAAACAAAACGGACAATACCTGTCAGCGATGGGCGTAGGCTATTACAATGGCTGAATTGGAATGATTTAAAATGGATCCATGGTGTAAACACATCTAAATAATCTCCATTTCTTAGTTCAGGTTAGGAATATGATCTTATTATTATTGTTTTAGGTCCTCTATGATTACTTATTTTATTGTTAAAGTTGAAATTAGATAGTATGCACTCTATAATGGTATATAATGCATAAACTTTGTCATAATTATTTGGACTAATGTACAATTTTATATAGTTTTGTACGCTATAATTTATACTAACCTATGAAAGGAGATCCAAATTTTATATAGTTTTATATCTATATTTGACTAGCTATACTATCCACCTATCCTGCAATTATCTGTATGAATCAAACCAAGTCAAATTTGGTGAAAGCGAAACCAAACAGATAGCTACAAAATTTGCCAAAATTTAGATGTAAAGCCGACCCTCTTCTCACTCTGCAAGGTTCTTAGTCAGTTGGTCGTTTTATATGCCTTTCATACATTGAATATGCTTGTGATATTAGAACTCTCTATGAAAGGGAAATTTTCATCCTCACACTCAACAGATCTTGTTCTTATTTTCTATAACAATCACAGTTATAATAGACAATAAAATCTCATTGTTTGCAGCTTATTGATTCTGTTTTAAAAATATATATTACCAACAGTTACAGATTCATCACTCCATTATGTACAGTAAAATATTGTTTACTCTGACCATGAGTTGATTTTAGTATGCTTGTATTATTAAATCATCAATTTGAATCTCTTTTCATATAAAAAAAAATGGTTATCAAACCAAGTTAATTTAACGTGCATTTTCTTTTCTGAGTAAATAACTTGCTATCCAGCAAAAGGGCGAGTTACCAAAGTGCCCCAAACTCTCACTCTCTTAATATATATGCATTTTGTGCTTATGGGCTCCTTCAGGTTATATTGTTGCCTTTGTTGATTCATGCCTATAGAACCACCTGTCGAGTTGGTAACGCAAGAAAGCGAGCTCGTGCTTGGTGCTGCTGAGAGGTGAGAATCAGGGAATGAAATTTCTTTGTTCACTACAATTCATTTTTATTTCAGTTTTCGAGAAAATTTTGGAGATTATGGATTCTGAAAGAAAAATAATTTAAACTAATAGAACTATTATGGTTGAAGAGTGAATTCATTCTATTGATCCTGTTCTTCTTCCCTTCCTTCTATTAGGAGTACTATTTGGAATACGTAGGGAAATACAGCTTTTGATATTTGATTTGTAGATCTGGCCATTGACTCTGAAATTCAGAGAGGTTCTCTGTAAGCTTGTTGTTCCATTCCAAGAACAAGGAGGTTGAAAAATATTGGTGGGAAGTGGTGGAAGCGTTCTTGATCAGTTTCTTACATTGAGAAATTATACTCTTTCATCGAATAGTTTACGATATGTTTATTGTATATATATACTTAACATGATGGCTTAAATGACAAGACGTTTTCATAATAAATTTGTTGCATGGTAACTTCTCACTTATAAATTTCTTTGTAGCAGGACACAGTGAGATTTTACTGGTTAACATGGATGTTCCATCGCAGGTGGTTAATA

mRNA sequence

ATGAATTTTCTGCAGAACACTGCAATCAACCAAAAAATGCGATCAAAAGAGAAGAAGATGCTGCCAATTTCCGAGTCTGAGCTTCAGAATCCGACACATGGAATCTTGCTCCCTTTGAAGAGAAGACAACCAGAAGCTTGTTGTCTTTTGATGGACAGAAAAATGTTATATTGTTGCCTTTGTTGATTCATGCCTATAGAACCACCTGTCGAGTTGGTAACGCAAGAAAGCGAGCTCGTGCTTGGTGCTGCTGAGAGGACACAGTGAGATTTTACTGGTTAACATGGATGTTCCATCGCAGGTGGTTAATA

Coding sequence (CDS)

ATGAATTTTCTGCAGAACACTGCAATCAACCAAAAAATGCGATCAAAAGAGAAGAAGATGCTGCCAATTTCCGAGTCTGAGCTTCAGAATCCGACACATGGAATCTTGCTCCCTTTGAAGAGAAGACAACCAGAAGCTTGTTGTCTTTTGATGGACAGAAAAATGTTATATTGTTGCCTTTGTTGA

Protein sequence

MNFLQNTAINQKMRSKEKKMLPISESELQNPTHGILLPLKRRQPEACCLLMDRKMLYCCLC
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg02362-RACarg02362-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg02362CmoCh15G004210Cucurbita moschata (Rifu)carcmoB0362
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg02362Wax gourdcarwgoB0340
Carg02362Wax gourdcarwgoB0354
Carg02362Silver-seed gourdcarcarB184
Carg02362Silver-seed gourdcarcarB303
Carg02362Silver-seed gourdcarcarB306
Carg02362Silver-seed gourdcarcarB310
Carg02362Cucumber (Gy14) v2carcgybB0281
Carg02362Cucumber (Gy14) v2carcgybB0283
Carg02362Cucumber (Gy14) v1carcgyB0303
Carg02362Cucumber (Gy14) v1carcgyB0312
Carg02362Cucurbita maxima (Rimu)carcmaB0362
Carg02362Cucurbita maxima (Rimu)carcmaB0371
Carg02362Cucurbita maxima (Rimu)carcmaB0373
Carg02362Cucurbita maxima (Rimu)carcmaB0374
Carg02362Cucurbita moschata (Rifu)carcmoB0368
Carg02362Cucurbita moschata (Rifu)carcmoB0369
Carg02362Cucurbita moschata (Rifu)carcmoB0370
Carg02362Cucurbita pepo (Zucchini)carcpeB0366
Carg02362Cucurbita pepo (Zucchini)carcpeB0371
Carg02362Cucurbita pepo (Zucchini)carcpeB0372
Carg02362Cucurbita pepo (Zucchini)carcpeB0374
Carg02362Cucurbita pepo (Zucchini)carcpeB0377
Carg02362Wild cucumber (PI 183967)carcpiB0298
Carg02362Wild cucumber (PI 183967)carcpiB0300
Carg02362Cucumber (Chinese Long) v2carcuB0294
Carg02362Cucumber (Chinese Long) v2carcuB0296
Carg02362Cucumber (Chinese Long) v3carcucB0297
Carg02362Cucumber (Chinese Long) v3carcucB0299
Carg02362Bottle gourd (USVL1VR-Ls)carlsiB232
Carg02362Bottle gourd (USVL1VR-Ls)carlsiB241
Carg02362Melon (DHL92) v3.5.1carmeB0260
Carg02362Melon (DHL92) v3.5.1carmeB0264
Carg02362Melon (DHL92) v3.6.1carmedB0270
Carg02362Melon (DHL92) v3.6.1carmedB0275
Carg02362Watermelon (Charleston Gray)carwcgB0249
Carg02362Watermelon (Charleston Gray)carwcgB0253
Carg02362Watermelon (Charleston Gray)carwcgB0261
Carg02362Watermelon (97103) v1carwmB0246
Carg02362Watermelon (97103) v1carwmB0250
Carg02362Watermelon (97103) v1carwmB0253
Carg02362Watermelon (97103) v2carwmbB0267
Carg02362Watermelon (97103) v2carwmbB0270
Carg02362Watermelon (97103) v2carwmbB0271
Carg02362Watermelon (97103) v2carwmbB0279