Carg02358 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg02358
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Enoyl-CoA isomerase
Location	Cucurbita_argyrosperma_scaffold_007 : 1354776 .. 1355492 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGTTCGTTGCAGAGAAGAGGGAATATCTTTCTCCTAACCCTAACTGGTCCCGGTGAGCACAGACTCAATCTCAATCTTCTAGATGCTATTCAATCCTCTGTTCGTCAAGTTCGCTCTGAGGCTGAATCCGCTGTTGTCGCTGGAAATTCCGCTAGTTTCGCCCTAATCACCACCGCAGAAGGTAAGTTCTTCTCTAATGGATACGATATCGATTGGGCGAAGACCTCAATGGATAAAATGATTCTGATGGACGATAAGTTAAAATCTGTCGTATCCGACCTAATCACGCTTCCGATGCCGACGATCGCCGCCGTTACCGGTCATGCGTCGGCCGCCGGCTTCCTTTTCGCGATGAGTCACGATTACATCCTGATGAGGAGAGATCGTGGATTTCTGTACATGAGCGAACTCGACATTCGTCGAGTGATTCCATCGTGGTTTACGGTTCTAGTCAAGGGCAAAATTGGAGCAGCGTCAGTTCGACGCGACGTCGTTTTGAAAGCGCCGAAACTGACGGCGGATAAGGCTCTGGAAATGGGAATTATTGAATCGGCGCACGATGGTGCGGCGGAGACCGTCGCAGCTGCCGTGAAATTGGCGGAGGATTTGGTGGCGAGGAAATGGGACGGCCACATTTACGCCGGGAATCGGATGGAGCTTCTCTCTGAGGTTCTGAATGTCATTGGAGCCCGTTGCTCCGTCGCAAAGCTCTGA

mRNA sequence

ATGTGTTCGTTGCAGAGAAGAGGGAATATCTTTCTCCTAACCCTAACTGGTCCCGGTGAGCACAGACTCAATCTCAATCTTCTAGATGCTATTCAATCCTCTGTTCGTCAAGTTCGCTCTGAGGCTGAATCCGCTGTTGTCGCTGGAAATTCCGCTAGTTTCGCCCTAATCACCACCGCAGAAGGTAAGTTCTTCTCTAATGGATACGATATCGATTGGGCGAAGACCTCAATGGATAAAATGATTCTGATGGACGATAAGTTAAAATCTGTCGTATCCGACCTAATCACGCTTCCGATGCCGACGATCGCCGCCGTTACCGGTCATGCGTCGGCCGCCGGCTTCCTTTTCGCGATGAGTCACGATTACATCCTGATGAGGAGAGATCGTGGATTTCTGTACATGAGCGAACTCGACATTCGTCGAGTGATTCCATCGTGGTTTACGGTTCTAGTCAAGGGCAAAATTGGAGCAGCGTCAGTTCGACGCGACGTCGTTTTGAAAGCGCCGAAACTGACGGCGGATAAGGCTCTGGAAATGGGAATTATTGAATCGGCGCACGATGGTGCGGCGGAGACCGTCGCAGCTGCCGTGAAATTGGCGGAGGATTTGGTGGCGAGGAAATGGGACGGCCACATTTACGCCGGGAATCGGATGGAGCTTCTCTCTGAGGTTCTGAATGTCATTGGAGCCCGTTGCTCCGTCGCAAAGCTCTGA

Coding sequence (CDS)

ATGTGTTCGTTGCAGAGAAGAGGGAATATCTTTCTCCTAACCCTAACTGGTCCCGGTGAGCACAGACTCAATCTCAATCTTCTAGATGCTATTCAATCCTCTGTTCGTCAAGTTCGCTCTGAGGCTGAATCCGCTGTTGTCGCTGGAAATTCCGCTAGTTTCGCCCTAATCACCACCGCAGAAGGTAAGTTCTTCTCTAATGGATACGATATCGATTGGGCGAAGACCTCAATGGATAAAATGATTCTGATGGACGATAAGTTAAAATCTGTCGTATCCGACCTAATCACGCTTCCGATGCCGACGATCGCCGCCGTTACCGGTCATGCGTCGGCCGCCGGCTTCCTTTTCGCGATGAGTCACGATTACATCCTGATGAGGAGAGATCGTGGATTTCTGTACATGAGCGAACTCGACATTCGTCGAGTGATTCCATCGTGGTTTACGGTTCTAGTCAAGGGCAAAATTGGAGCAGCGTCAGTTCGACGCGACGTCGTTTTGAAAGCGCCGAAACTGACGGCGGATAAGGCTCTGGAAATGGGAATTATTGAATCGGCGCACGATGGTGCGGCGGAGACCGTCGCAGCTGCCGTGAAATTGGCGGAGGATTTGGTGGCGAGGAAATGGGACGGCCACATTTACGCCGGGAATCGGATGGAGCTTCTCTCTGAGGTTCTGAATGTCATTGGAGCCCGTTGCTCCGTCGCAAAGCTCTGA

Protein sequence

MCSLQRRGNIFLLTLTGPGEHRLNLNLLDAIQSSVRQVRSEAESAVVAGNSASFALITTAEGKFFSNGYDIDWAKTSMDKMILMDDKLKSVVSDLITLPMPTIAAVTGHASAAGFLFAMSHDYILMRRDRGFLYMSELDIRRVIPSWFTVLVKGKIGAASVRRDVVLKAPKLTADKALEMGIIESAHDGAAETVAAAVKLAEDLVARKWDGHIYAGNRMELLSEVLNVIGARCSVAKL

Homology

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BLAST of Carg02358 vs. NCBI nr
Match: XP_023550952.1 (enoyl-CoA delta isomerase 1, peroxisomal [Cucurbita pepo subsp. pepo])

HSP 1 Score: 447.2 bits (1149), Expect = 3.5e-122
Identity = 232/238 (97.48%), Postives = 235/238 (98.74%), Query Frame = 0


Query: 1   MCSLQRRGNIFLLTLTGPGEHRLNLNLLDAIQSSVRQVRSEAESAVVAGNSASFALITTA 60
           MCSLQRRGNIFLLTLTGPGEHRLNLNLLDAIQSSVRQVRSEAESAVVAGNSASFALITTA
Sbjct: 1   MCSLQRRGNIFLLTLTGPGEHRLNLNLLDAIQSSVRQVRSEAESAVVAGNSASFALITTA 60

Query: 61  EGKFFSNGYDIDWAKTSMDKMILMDDKLKSVVSDLITLPMPTIAAVTGHASAAGFLFAMS 120
           EGKFFSNGYD+DWAKTSMDKMILMDDKLKSVVSDLITLPMPTIAAVTGHASAAGF+ AMS
Sbjct: 61  EGKFFSNGYDLDWAKTSMDKMILMDDKLKSVVSDLITLPMPTIAAVTGHASAAGFILAMS 120

Query: 121 HDYILMRRDRGFLYMSELDIRRVIPSWFTVLVKGKIGAASVRRDVVLKAPKLTADKALEM 180
           HDYILMRRDRGFLYMSELDIRRVIPSWFTVLVK KIG ASVRRDVVLKAPKLTADKALEM
Sbjct: 121 HDYILMRRDRGFLYMSELDIRRVIPSWFTVLVKSKIGTASVRRDVVLKAPKLTADKALEM 180

Query: 181 GIIESAHDGAAETVAAAVKLAEDLVARKWDGHIYAGNRMELLSEVLNVIGARCSVAKL 239
           GIIESAHDGAAETVAAAVKLAED+VARKWDGHIYAGNRMELLSEVLNVIGARCSVAKL
Sbjct: 181 GIIESAHDGAAETVAAAVKLAEDVVARKWDGHIYAGNRMELLSEVLNVIGARCSVAKL 238

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BLAST of Carg02358 vs. NCBI nr
Match: XP_022939279.1 (enoyl-CoA delta isomerase 1, peroxisomal [Cucurbita moschata])

HSP 1 Score: 446.4 bits (1147), Expect = 5.9e-122
Identity = 232/238 (97.48%), Postives = 235/238 (98.74%), Query Frame = 0


Query: 1   MCSLQRRGNIFLLTLTGPGEHRLNLNLLDAIQSSVRQVRSEAESAVVAGNSASFALITTA 60
           MCSLQRRGNIFLLTLTGPGEHRLNLNLLDAIQSSVRQVRSEAESAVVAGNSASFALITTA
Sbjct: 1   MCSLQRRGNIFLLTLTGPGEHRLNLNLLDAIQSSVRQVRSEAESAVVAGNSASFALITTA 60

Query: 61  EGKFFSNGYDIDWAKTSMDKMILMDDKLKSVVSDLITLPMPTIAAVTGHASAAGFLFAMS 120
           EGKFFSNGYDIDWAK+SMDKMILMDDKLKSVVSDLITLPMPTIAAVTGHASAAGFLFAMS
Sbjct: 61  EGKFFSNGYDIDWAKSSMDKMILMDDKLKSVVSDLITLPMPTIAAVTGHASAAGFLFAMS 120

Query: 121 HDYILMRRDRGFLYMSELDIRRVIPSWFTVLVKGKIGAASVRRDVVLKAPKLTADKALEM 180
           HDYILMRRDRGFLYMSELDIRRVIPSWFTVLVK KIG ASVRRDVVLKAPKLTAD+ALEM
Sbjct: 121 HDYILMRRDRGFLYMSELDIRRVIPSWFTVLVKSKIGTASVRRDVVLKAPKLTADRALEM 180

Query: 181 GIIESAHDGAAETVAAAVKLAEDLVARKWDGHIYAGNRMELLSEVLNVIGARCSVAKL 239
           GIIESAHDGAAETV AAVKLAE+LVARKWDGHIYAGNRMELLSEVLNVIGARCSVAKL
Sbjct: 181 GIIESAHDGAAETVTAAVKLAEELVARKWDGHIYAGNRMELLSEVLNVIGARCSVAKL 238

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BLAST of Carg02358 vs. NCBI nr
Match: XP_022993099.1 (enoyl-CoA delta isomerase 1, peroxisomal [Cucurbita maxima])

HSP 1 Score: 444.5 bits (1142), Expect = 2.3e-121
Identity = 233/238 (97.90%), Postives = 234/238 (98.32%), Query Frame = 0


Query: 1   MCSLQRRGNIFLLTLTGPGEHRLNLNLLDAIQSSVRQVRSEAESAVVAGNSASFALITTA 60
           MCSLQRRGNIFLLTLTG GEHRLNLNLLDAIQSSVRQVRSEAESAVVAG SASFALITTA
Sbjct: 1   MCSLQRRGNIFLLTLTGSGEHRLNLNLLDAIQSSVRQVRSEAESAVVAGKSASFALITTA 60

Query: 61  EGKFFSNGYDIDWAKTSMDKMILMDDKLKSVVSDLITLPMPTIAAVTGHASAAGFLFAMS 120
           EGKFFSNGYDIDWAKTSMDKMILMDDKLKSVVSDLITLPMPTIAAVTGHASAAGFL AMS
Sbjct: 61  EGKFFSNGYDIDWAKTSMDKMILMDDKLKSVVSDLITLPMPTIAAVTGHASAAGFLLAMS 120

Query: 121 HDYILMRRDRGFLYMSELDIRRVIPSWFTVLVKGKIGAASVRRDVVLKAPKLTADKALEM 180
           HDYILMRRDRGFLYMSELDIRRVIPSWFTVLVK KIGAASVRRDVVLKAPKLTAD+ALEM
Sbjct: 121 HDYILMRRDRGFLYMSELDIRRVIPSWFTVLVKSKIGAASVRRDVVLKAPKLTADEALEM 180

Query: 181 GIIESAHDGAAETVAAAVKLAEDLVARKWDGHIYAGNRMELLSEVLNVIGARCSVAKL 239
           GIIESAHDGAAETVAAAVKLAEDLVARKWDGHIYAGNRMELLSEVLNVIGARCSVAKL
Sbjct: 181 GIIESAHDGAAETVAAAVKLAEDLVARKWDGHIYAGNRMELLSEVLNVIGARCSVAKL 238

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BLAST of Carg02358 vs. NCBI nr
Match: XP_008463475.1 (PREDICTED: enoyl-CoA delta isomerase 1, peroxisomal [Cucumis melo])

HSP 1 Score: 399.1 bits (1024), Expect = 1.1e-107
Identity = 202/238 (84.87%), Postives = 222/238 (93.28%), Query Frame = 0


Query: 1   MCSLQRRGNIFLLTLTGPGEHRLNLNLLDAIQSSVRQVRSEAESAVVAGNSASFALITTA 60
           MCSLQR GNIF+LTLTGPGEHR N  LLD+I+SS+RQVRS+ ESAV   +S++F LITTA
Sbjct: 1   MCSLQRSGNIFILTLTGPGEHRFNPQLLDSIRSSLRQVRSDVESAVSTDSSSNFVLITTA 60

Query: 61  EGKFFSNGYDIDWAKTSMDKMILMDDKLKSVVSDLITLPMPTIAAVTGHASAAGFLFAMS 120
           EGKFFSNGYDIDW KTSM++MILMDDKLKSVVSDLITLPMPTIAAV+GHASAAGF+FAMS
Sbjct: 61  EGKFFSNGYDIDWEKTSMNQMILMDDKLKSVVSDLITLPMPTIAAVSGHASAAGFIFAMS 120

Query: 121 HDYILMRRDRGFLYMSELDIRRVIPSWFTVLVKGKIGAASVRRDVVLKAPKLTADKALEM 180
           HDYI+MRRDRGFLYMSELDIRRVIP WF VLVK +IG+A+VRR+VVLKAPKLTADKALE+
Sbjct: 121 HDYIVMRRDRGFLYMSELDIRRVIPQWFAVLVKSRIGSAAVRREVVLKAPKLTADKALEL 180

Query: 181 GIIESAHDGAAETVAAAVKLAEDLVARKWDGHIYAGNRMELLSEVLNVIGARCSVAKL 239
           GII+SAHDGA ETVAAAV+L EDLVARKWDGH YAGNRMELLSEVLNVIGARCSVAKL
Sbjct: 181 GIIDSAHDGAEETVAAAVRLGEDLVARKWDGHTYAGNRMELLSEVLNVIGARCSVAKL 238

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BLAST of Carg02358 vs. NCBI nr
Match: XP_004142741.1 (PREDICTED: methylglutaconyl-CoA hydratase, mitochondrial [Cucumis sativus] >KGN51283.1 hypothetical protein Csa_5G512900 [Cucumis sativus])

HSP 1 Score: 392.9 bits (1008), Expect = 7.8e-106
Identity = 199/238 (83.61%), Postives = 222/238 (93.28%), Query Frame = 0


Query: 1   MCSLQRRGNIFLLTLTGPGEHRLNLNLLDAIQSSVRQVRSEAESAVVAGNSASFALITTA 60
           M SLQRRGNIF+LTLTGPGEHR + +LLD+I+SS+RQVRS AESA  +G S++F LITTA
Sbjct: 1   MSSLQRRGNIFILTLTGPGEHRFSPHLLDSIRSSLRQVRSHAESAASSGTSSNFVLITTA 60

Query: 61  EGKFFSNGYDIDWAKTSMDKMILMDDKLKSVVSDLITLPMPTIAAVTGHASAAGFLFAMS 120
           EGKFFSNGYDIDWAKTSM++MILMDD LKSVVSDLITLPMPTIAAV+GHASAAGF+FAMS
Sbjct: 61  EGKFFSNGYDIDWAKTSMNQMILMDDNLKSVVSDLITLPMPTIAAVSGHASAAGFIFAMS 120

Query: 121 HDYILMRRDRGFLYMSELDIRRVIPSWFTVLVKGKIGAASVRRDVVLKAPKLTADKALEM 180
           HDYI+MRRDRGFLYMSELDI RVIP WF VLVK +IG+A+VRR+VVLKAPKLTADKALE+
Sbjct: 121 HDYIVMRRDRGFLYMSELDIGRVIPQWFAVLVKSRIGSAAVRREVVLKAPKLTADKALEL 180

Query: 181 GIIESAHDGAAETVAAAVKLAEDLVARKWDGHIYAGNRMELLSEVLNVIGARCSVAKL 239
           GII+S+HDGA ETVAA V+LAEDLVARKWDGH YAGNRMELLSEVLNV+GARCSVAKL
Sbjct: 181 GIIDSSHDGAEETVAAGVRLAEDLVARKWDGHTYAGNRMELLSEVLNVMGARCSVAKL 238

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BLAST of Carg02358 vs. TAIR10
Match: AT1G65520.1 (delta(3), delta(2)-enoyl CoA isomerase 1)

HSP 1 Score: 260.0 bits (663), Expect = 1.4e-69
Identity = 129/226 (57.08%), Postives = 175/226 (77.43%), Query Frame = 0


Query: 1   MCSLQRRGNIFLLTLTGPGEHRLNLNLLDAIQSSVRQVRSEAESAVVAGNSASFALITTA 60
           MCSL++R  +F+L LTG GEHRLN  LLD+++S++ Q+RS+        + +   LITT+
Sbjct: 1   MCSLEKRDRLFILKLTGDGEHRLNPTLLDSLRSTINQIRSDP-------SFSQSVLITTS 60

Query: 61  EGKFFSNGYDIDWAKTSMDKMILMDDKLKSVVSDLITLPMPTIAAVTGHASAAGFLFAMS 120
           +GKFFSNGYD+  A+++    ++MD KL+S+V+DLI+LPMPTIAAVTGHASAAG + AMS
Sbjct: 61  DGKFFSNGYDLALAESNPSLSVVMDAKLRSLVADLISLPMPTIAAVTGHASAAGCILAMS 120

Query: 121 HDYILMRRDRGFLYMSELDIRRVIPSWFTVLVKGKIGAASVRRDVVLKAPKLTADKALEM 180
           HDY+LMRRDRGFLYMSELDI  ++P+WF  +++GKIG+ + RRDV+L A K+TAD  ++M
Sbjct: 121 HDYVLMRRDRGFLYMSELDIELIVPAWFMAVIRGKIGSPAARRDVMLTAAKVTADVGVKM 180

Query: 181 GIIESAHDGAAETVAAAVKLAEDLVARKWDGHIYAGNRMELLSEVL 227
           GI++SA+  AAETV AA+KL E++V R  DGH+Y   R  LL EVL
Sbjct: 181 GIVDSAYGSAAETVEAAIKLGEEIVQRGGDGHVYGKMRESLLREVL 219

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BLAST of Carg02358 vs. TAIR10
Match: AT4G14430.1 (indole-3-butyric acid response 10)

HSP 1 Score: 206.1 bits (523), Expect = 2.5e-53
Identity = 106/242 (43.80%), Postives = 160/242 (66.12%), Query Frame = 0


Query: 1   MCSLQRRGNIFLLTLTGPGEHRLNLNLLDAIQSSVRQVRSEAESAVVAGNSASFALITTA 60
           MC+L++RG++FLLTLTG GEHR + + +  I S + Q +S++    +        LITTA
Sbjct: 1   MCTLEKRGDLFLLTLTGDGEHRFHPDTIATILSLLEQAKSQSTRGSI--------LITTA 60

Query: 61  EGKFFSNGYDIDWAKT------SMDKMILMDDKLKSVVSDLITLPMPTIAAVTGHASAAG 120
            GKFFSNG+D+ WA+T      + +++  M +  K VV+ L+ LPMPTIAA+ GHA+AAG
Sbjct: 61  NGKFFSNGFDLAWAQTAGSKTGAANRLHQMVESFKPVVAALLDLPMPTIAALNGHAAAAG 120

Query: 121 FLFAMSHDYILMRRDRGFLYMSELDIRRVIPSWFTVLVKGKIGAASVRRDVVLKAPKLTA 180
            + A+SHDY+ MR+DRG LYMSE+DI   +P +F+ LV+ KIG ++ RR+++L   K+  
Sbjct: 121 LILALSHDYVFMRKDRGVLYMSEVDIGLSMPDYFSALVRAKIGTSAARRELLLSGKKIRG 180

Query: 181 DKALEMGIIES-AHDGAAETVAAAVKLAEDLVARKWDGHIYAGNRMELLSEVLNVIGARC 236
           ++A+ +GI++S A+D     V A+V+L E L A+KW G +YA  R  L  E+  ++G   
Sbjct: 181 EEAVGLGIVDSAAYDSEEGVVVASVRLGEKLAAKKWSGEVYASIRKSLYPELCGILGLET 234

[Close]

BLAST of Carg02358 vs. TAIR10
Match: AT4G14440.1 (3-hydroxyacyl-CoA dehydratase 1)

HSP 1 Score: 200.3 bits (508), Expect = 1.3e-51
Identity = 103/234 (44.02%), Postives = 155/234 (66.24%), Query Frame = 0


Query: 1   MCSLQRRGNIFLLTLTGPGEHRLNLNLLDAIQSSVRQVRSEAESAVVAGNSASFALITTA 60
           MC+L++RG++FLLTLTG  EHR + + + ++ S + Q +S++    V        LITT 
Sbjct: 1   MCTLEKRGDLFLLTLTGEDEHRFHPDTIASVLSLLEQAKSQSTKGSV--------LITTG 60

Query: 61  EGKFFSNGYDIDWAKT----SMDKMILMDDKLKSVVSDLITLPMPTIAAVTGHASAAGFL 120
            GKFFSNG+D+ WA++    ++ +M  M    K V++ L+ LPMPTIAA+ GHA+A+G +
Sbjct: 61  HGKFFSNGFDLAWAQSAGHGAIKRMHQMVKSFKPVLAALLDLPMPTIAALNGHAAASGLM 120

Query: 121 FAMSHDYILMRRDRGFLYMSELDIRRVIPSWFTVLVKGKIGAASVRRDVVLKAPKLTADK 180
           FA+SHDY+ MR+DRG LYMSE+DI   +P +F+ LV  K+G+   RR+++L   KL  ++
Sbjct: 121 FALSHDYVFMRKDRGVLYMSEVDIGLPVPDYFSALVVAKVGSGIARRELLLSGKKLKGEE 180

Query: 181 ALEMGIIES-AHDGAAETVAAAVKLAEDLVARKWDGHIYAGNRMELLSEVLNVI 230
           A+ +GI++S AHD A   V A V L E L A+KW+G +YA  R  L  E+  ++
Sbjct: 181 AVALGIVDSAAHDSAEGVVEATVSLGESLAAKKWNGEVYATIRKSLYPELCRMV 226

[Close]

BLAST of Carg02358 vs. Swiss-Prot
Match: sp|O04469|ECI1_ARATH (Enoyl-CoA delta isomerase 1, peroxisomal OS=Arabidopsis thaliana OX=3702 GN=ECI1 PE=1 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 2.6e-68
Identity = 129/226 (57.08%), Postives = 175/226 (77.43%), Query Frame = 0


Query: 1   MCSLQRRGNIFLLTLTGPGEHRLNLNLLDAIQSSVRQVRSEAESAVVAGNSASFALITTA 60
           MCSL++R  +F+L LTG GEHRLN  LLD+++S++ Q+RS+        + +   LITT+
Sbjct: 1   MCSLEKRDRLFILKLTGDGEHRLNPTLLDSLRSTINQIRSDP-------SFSQSVLITTS 60

Query: 61  EGKFFSNGYDIDWAKTSMDKMILMDDKLKSVVSDLITLPMPTIAAVTGHASAAGFLFAMS 120
           +GKFFSNGYD+  A+++    ++MD KL+S+V+DLI+LPMPTIAAVTGHASAAG + AMS
Sbjct: 61  DGKFFSNGYDLALAESNPSLSVVMDAKLRSLVADLISLPMPTIAAVTGHASAAGCILAMS 120

Query: 121 HDYILMRRDRGFLYMSELDIRRVIPSWFTVLVKGKIGAASVRRDVVLKAPKLTADKALEM 180
           HDY+LMRRDRGFLYMSELDI  ++P+WF  +++GKIG+ + RRDV+L A K+TAD  ++M
Sbjct: 121 HDYVLMRRDRGFLYMSELDIELIVPAWFMAVIRGKIGSPAARRDVMLTAAKVTADVGVKM 180

Query: 181 GIIESAHDGAAETVAAAVKLAEDLVARKWDGHIYAGNRMELLSEVL 227
           GI++SA+  AAETV AA+KL E++V R  DGH+Y   R  LL EVL
Sbjct: 181 GIVDSAYGSAAETVEAAIKLGEEIVQRGGDGHVYGKMRESLLREVL 219

[Close]

BLAST of Carg02358 vs. Swiss-Prot
Match: sp|O23299|ECI2_ARATH (Enoyl-CoA delta isomerase 2, peroxisomal OS=Arabidopsis thaliana OX=3702 GN=ECI2 PE=1 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 4.4e-52
Identity = 106/242 (43.80%), Postives = 160/242 (66.12%), Query Frame = 0


Query: 1   MCSLQRRGNIFLLTLTGPGEHRLNLNLLDAIQSSVRQVRSEAESAVVAGNSASFALITTA 60
           MC+L++RG++FLLTLTG GEHR + + +  I S + Q +S++    +        LITTA
Sbjct: 1   MCTLEKRGDLFLLTLTGDGEHRFHPDTIATILSLLEQAKSQSTRGSI--------LITTA 60

Query: 61  EGKFFSNGYDIDWAKT------SMDKMILMDDKLKSVVSDLITLPMPTIAAVTGHASAAG 120
            GKFFSNG+D+ WA+T      + +++  M +  K VV+ L+ LPMPTIAA+ GHA+AAG
Sbjct: 61  NGKFFSNGFDLAWAQTAGSKTGAANRLHQMVESFKPVVAALLDLPMPTIAALNGHAAAAG 120

Query: 121 FLFAMSHDYILMRRDRGFLYMSELDIRRVIPSWFTVLVKGKIGAASVRRDVVLKAPKLTA 180
            + A+SHDY+ MR+DRG LYMSE+DI   +P +F+ LV+ KIG ++ RR+++L   K+  
Sbjct: 121 LILALSHDYVFMRKDRGVLYMSEVDIGLSMPDYFSALVRAKIGTSAARRELLLSGKKIRG 180

Query: 181 DKALEMGIIES-AHDGAAETVAAAVKLAEDLVARKWDGHIYAGNRMELLSEVLNVIGARC 236
           ++A+ +GI++S A+D     V A+V+L E L A+KW G +YA  R  L  E+  ++G   
Sbjct: 181 EEAVGLGIVDSAAYDSEEGVVVASVRLGEKLAAKKWSGEVYASIRKSLYPELCGILGLET 234

[Close]

BLAST of Carg02358 vs. Swiss-Prot
Match: sp|O23300|ECI3_ARATH (Enoyl-CoA delta isomerase 3 OS=Arabidopsis thaliana OX=3702 GN=ECI3 PE=1 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 2.4e-50
Identity = 103/234 (44.02%), Postives = 155/234 (66.24%), Query Frame = 0


Query: 1   MCSLQRRGNIFLLTLTGPGEHRLNLNLLDAIQSSVRQVRSEAESAVVAGNSASFALITTA 60
           MC+L++RG++FLLTLTG  EHR + + + ++ S + Q +S++    V        LITT 
Sbjct: 1   MCTLEKRGDLFLLTLTGEDEHRFHPDTIASVLSLLEQAKSQSTKGSV--------LITTG 60

Query: 61  EGKFFSNGYDIDWAKT----SMDKMILMDDKLKSVVSDLITLPMPTIAAVTGHASAAGFL 120
            GKFFSNG+D+ WA++    ++ +M  M    K V++ L+ LPMPTIAA+ GHA+A+G +
Sbjct: 61  HGKFFSNGFDLAWAQSAGHGAIKRMHQMVKSFKPVLAALLDLPMPTIAALNGHAAASGLM 120

Query: 121 FAMSHDYILMRRDRGFLYMSELDIRRVIPSWFTVLVKGKIGAASVRRDVVLKAPKLTADK 180
           FA+SHDY+ MR+DRG LYMSE+DI   +P +F+ LV  K+G+   RR+++L   KL  ++
Sbjct: 121 FALSHDYVFMRKDRGVLYMSEVDIGLPVPDYFSALVVAKVGSGIARRELLLSGKKLKGEE 180

Query: 181 ALEMGIIES-AHDGAAETVAAAVKLAEDLVARKWDGHIYAGNRMELLSEVLNVI 230
           A+ +GI++S AHD A   V A V L E L A+KW+G +YA  R  L  E+  ++
Sbjct: 181 AVALGIVDSAAHDSAEGVVEATVSLGESLAAKKWNGEVYATIRKSLYPELCRMV 226

[Close]

BLAST of Carg02358 vs. TrEMBL
Match: tr|A0A1S3CKX3|A0A1S3CKX3_CUCME (enoyl-CoA delta isomerase 1, peroxisomal OS=Cucumis melo OX=3656 GN=LOC103501637 PE=4 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 7.2e-108
Identity = 202/238 (84.87%), Postives = 222/238 (93.28%), Query Frame = 0


Query: 1   MCSLQRRGNIFLLTLTGPGEHRLNLNLLDAIQSSVRQVRSEAESAVVAGNSASFALITTA 60
           MCSLQR GNIF+LTLTGPGEHR N  LLD+I+SS+RQVRS+ ESAV   +S++F LITTA
Sbjct: 1   MCSLQRSGNIFILTLTGPGEHRFNPQLLDSIRSSLRQVRSDVESAVSTDSSSNFVLITTA 60

Query: 61  EGKFFSNGYDIDWAKTSMDKMILMDDKLKSVVSDLITLPMPTIAAVTGHASAAGFLFAMS 120
           EGKFFSNGYDIDW KTSM++MILMDDKLKSVVSDLITLPMPTIAAV+GHASAAGF+FAMS
Sbjct: 61  EGKFFSNGYDIDWEKTSMNQMILMDDKLKSVVSDLITLPMPTIAAVSGHASAAGFIFAMS 120

Query: 121 HDYILMRRDRGFLYMSELDIRRVIPSWFTVLVKGKIGAASVRRDVVLKAPKLTADKALEM 180
           HDYI+MRRDRGFLYMSELDIRRVIP WF VLVK +IG+A+VRR+VVLKAPKLTADKALE+
Sbjct: 121 HDYIVMRRDRGFLYMSELDIRRVIPQWFAVLVKSRIGSAAVRREVVLKAPKLTADKALEL 180

Query: 181 GIIESAHDGAAETVAAAVKLAEDLVARKWDGHIYAGNRMELLSEVLNVIGARCSVAKL 239
           GII+SAHDGA ETVAAAV+L EDLVARKWDGH YAGNRMELLSEVLNVIGARCSVAKL
Sbjct: 181 GIIDSAHDGAEETVAAAVRLGEDLVARKWDGHTYAGNRMELLSEVLNVIGARCSVAKL 238

[Close]

BLAST of Carg02358 vs. TrEMBL
Match: tr|A0A0A0KNT0|A0A0A0KNT0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G512900 PE=4 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 5.2e-106
Identity = 199/238 (83.61%), Postives = 222/238 (93.28%), Query Frame = 0


Query: 1   MCSLQRRGNIFLLTLTGPGEHRLNLNLLDAIQSSVRQVRSEAESAVVAGNSASFALITTA 60
           M SLQRRGNIF+LTLTGPGEHR + +LLD+I+SS+RQVRS AESA  +G S++F LITTA
Sbjct: 1   MSSLQRRGNIFILTLTGPGEHRFSPHLLDSIRSSLRQVRSHAESAASSGTSSNFVLITTA 60

Query: 61  EGKFFSNGYDIDWAKTSMDKMILMDDKLKSVVSDLITLPMPTIAAVTGHASAAGFLFAMS 120
           EGKFFSNGYDIDWAKTSM++MILMDD LKSVVSDLITLPMPTIAAV+GHASAAGF+FAMS
Sbjct: 61  EGKFFSNGYDIDWAKTSMNQMILMDDNLKSVVSDLITLPMPTIAAVSGHASAAGFIFAMS 120

Query: 121 HDYILMRRDRGFLYMSELDIRRVIPSWFTVLVKGKIGAASVRRDVVLKAPKLTADKALEM 180
           HDYI+MRRDRGFLYMSELDI RVIP WF VLVK +IG+A+VRR+VVLKAPKLTADKALE+
Sbjct: 121 HDYIVMRRDRGFLYMSELDIGRVIPQWFAVLVKSRIGSAAVRREVVLKAPKLTADKALEL 180

Query: 181 GIIESAHDGAAETVAAAVKLAEDLVARKWDGHIYAGNRMELLSEVLNVIGARCSVAKL 239
           GII+S+HDGA ETVAA V+LAEDLVARKWDGH YAGNRMELLSEVLNV+GARCSVAKL
Sbjct: 181 GIIDSSHDGAEETVAAGVRLAEDLVARKWDGHTYAGNRMELLSEVLNVMGARCSVAKL 238

[Close]

BLAST of Carg02358 vs. TrEMBL
Match: tr|A0A2K3L391|A0A2K3L391_TRIPR (Carnitinyl-CoA dehydratase-like protein OS=Trifolium pratense OX=57577 GN=L195_g028909 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.0e-74
Identity = 144/229 (62.88%), Postives = 184/229 (80.35%), Query Frame = 0


Query: 1   MCSLQRRGNIFLLTLTGPGEHRLNLNLLDAIQSSVRQVRSEAESAVVAGNSASFALITTA 60
           MCSL++RGNIF+LTLTG GEHRLN  LL++I+S++  VR +A        + S ALITTA
Sbjct: 1   MCSLEKRGNIFILTLTGDGEHRLNPTLLNSIKSTLHHVRQQA--------TTSSALITTA 60

Query: 61  EGKFFSNGYDIDWAKTSMDKMILMDDKLKSVVSDLITLPMPTIAAVTGHASAAGFLFAMS 120
            GKFFSNGYDI+WAK SM  MILMDD L+S++SDLI+LPMPTIAAVTGHA+AAG++ A+S
Sbjct: 61  HGKFFSNGYDINWAK-SMQDMILMDDLLRSIISDLISLPMPTIAAVTGHAAAAGYMLALS 120

Query: 121 HDYILMRRDRGFLYMSELDIRRVIPSWFTVLVKGKIGAASVRRDVVLKAPKLTADKALEM 180
           HDY+LMR DRGFLYMSELDI+RVIP+WF  +V  K+G+A+ RR +V++A K+TA +A+ +
Sbjct: 121 HDYVLMRSDRGFLYMSELDIKRVIPAWFVAVVDAKVGSAAARRKIVMQAEKVTAKEAVRL 180

Query: 181 GIIESAHDGAAETVAAAVKLAEDLVARKWDGHIYAGNRMELLSEVLNVI 230
           GI++SAHD A ETV AAV L  DLV R WDGH+YA NR + LS V++ +
Sbjct: 181 GIVDSAHDSADETVEAAVVLGVDLVKRGWDGHVYADNRKKFLSNVIHAV 220

[Close]

BLAST of Carg02358 vs. TrEMBL
Match: tr|A0A1S2XQS0|A0A1S2XQS0_CICAR (enoyl-CoA delta isomerase 1, peroxisomal-like OS=Cicer arietinum OX=3827 GN=LOC101494437 PE=4 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 3.1e-74
Identity = 142/229 (62.01%), Postives = 182/229 (79.48%), Query Frame = 0


Query: 1   MCSLQRRGNIFLLTLTGPGEHRLNLNLLDAIQSSVRQVRSEAESAVVAGNSASFALITTA 60
           MCSL++RG+IF+LTLTG  EHRLN  LL++I+S++ +VR EA        + S ALITTA
Sbjct: 1   MCSLEKRGDIFILTLTGDNEHRLNPTLLNSIKSALHRVRQEA--------TTSSALITTA 60

Query: 61  EGKFFSNGYDIDWAKTSMDKMILMDDKLKSVVSDLITLPMPTIAAVTGHASAAGFLFAMS 120
            GKFFSNGYD+DW+++  D++ILMDD L+SVVSDLI+LPMPTIAAVTGHASAAG++ A++
Sbjct: 61  HGKFFSNGYDVDWSQSFYDRLILMDDLLRSVVSDLISLPMPTIAAVTGHASAAGYILALA 120

Query: 121 HDYILMRRDRGFLYMSELDIRRVIPSWFTVLVKGKIGAASVRRDVVLKAPKLTADKALEM 180
           HDY+LMR DRGFLYMSE+DI RVIP+WF  +V  K+G+A+ RR +V++A K+TA +AL +
Sbjct: 121 HDYVLMRSDRGFLYMSEIDINRVIPAWFIAIVDAKVGSAAARRRIVMQADKITAKEALRL 180

Query: 181 GIIESAHDGAAETVAAAVKLAEDLVARKWDGHIYAGNRMELLSEVLNVI 230
           GII SAHD A ETV AAV LA DLV R WDGH+YA NR + L  V+  +
Sbjct: 181 GIIYSAHDSAEETVKAAVGLAVDLVKRGWDGHVYAANRKKFLGHVIRAV 221

[Close]

BLAST of Carg02358 vs. TrEMBL
Match: tr|A0A218XRF2|A0A218XRF2_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr022635 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 1.5e-73
Identity = 137/231 (59.31%), Postives = 184/231 (79.65%), Query Frame = 0


Query: 1   MCSLQRRGNIFLLTLTGPGEHRLNLNLLDAIQSSVRQVRSEAESAVVAGNSASFALITTA 60
           MC+L++RG +F+LT+TGPGEHRLN  L+ +++S++R+VR E   +         AL+TTA
Sbjct: 1   MCTLEKRGKVFVLTITGPGEHRLNPTLVGSLRSALRRVREEPNCS---------ALVTTA 60

Query: 61  EGKFFSNGYDIDWAKTSMDKMILMDDKLKSVVSDLITLPMPTIAAVTGHASAAGFLFAMS 120
           EGKFFSNGYD+ WA+   D++ LM  +L+++V DLI+LPMPTIAAVTGHASAAG + A+S
Sbjct: 61  EGKFFSNGYDLSWAQNQSDRLELMSSELRALVRDLISLPMPTIAAVTGHASAAGLILALS 120

Query: 121 HDYILMRRDRGFLYMSELDIRRVIPSWFTVLVKGKIGAASVRRDVVLKAPKLTADKALEM 180
           HDY+LMR+DRGFLYMSE+DI  V+P WF VL+K K+G  + RR++++KA KLTA +   M
Sbjct: 121 HDYVLMRKDRGFLYMSEVDIGLVLPRWFVVLIKSKVGLPAARREMLMKAAKLTAAQGAAM 180

Query: 181 GIIESAHDGAAETVAAAVKLAEDLVARKWDGHIYAGNRMELLSEVLNVIGA 232
           GII+SAHDG  ET++AAV+LAE+LVARKWDGH+YA NRM +L EVL+  G+
Sbjct: 181 GIIDSAHDGPEETMSAAVRLAEELVARKWDGHVYAANRMVVLREVLDSPGS 222

The following BLAST results are available for this feature:

BLAST of Carg02358 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023550952.1	3.5e-122	97.48	enoyl-CoA delta isomerase 1, peroxisomal [Cucurbita pepo subsp. pepo]	[more]
XP_022939279.1	5.9e-122	97.48	enoyl-CoA delta isomerase 1, peroxisomal [Cucurbita moschata]	[more]
XP_022993099.1	2.3e-121	97.90	enoyl-CoA delta isomerase 1, peroxisomal [Cucurbita maxima]	[more]
XP_008463475.1	1.1e-107	84.87	PREDICTED: enoyl-CoA delta isomerase 1, peroxisomal [Cucumis melo]	[more]
XP_004142741.1	7.8e-106	83.61	PREDICTED: methylglutaconyl-CoA hydratase, mitochondrial [Cucumis sativus] >KGN5...	[more]

BLAST of Carg02358 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G65520.1	1.4e-69	57.08	delta(3), delta(2)-enoyl CoA isomerase 1	[more]
AT4G14430.1	2.5e-53	43.80	indole-3-butyric acid response 10	[more]
AT4G14440.1	1.3e-51	44.02	3-hydroxyacyl-CoA dehydratase 1	[more]

BLAST of Carg02358 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O04469\|ECI1_ARATH	2.6e-68	57.08	Enoyl-CoA delta isomerase 1, peroxisomal OS=Arabidopsis thaliana OX=3702 GN=ECI1...	[more]
sp\|O23299\|ECI2_ARATH	4.4e-52	43.80	Enoyl-CoA delta isomerase 2, peroxisomal OS=Arabidopsis thaliana OX=3702 GN=ECI2...	[more]
sp\|O23300\|ECI3_ARATH	2.4e-50	44.02	Enoyl-CoA delta isomerase 3 OS=Arabidopsis thaliana OX=3702 GN=ECI3 PE=1 SV=1	[more]

BLAST of Carg02358 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CKX3\|A0A1S3CKX3_CUCME	7.2e-108	84.87	enoyl-CoA delta isomerase 1, peroxisomal OS=Cucumis melo OX=3656 GN=LOC103501637...	[more]
tr\|A0A0A0KNT0\|A0A0A0KNT0_CUCSA	5.2e-106	83.61	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G512900 PE=4 SV=1	[more]
tr\|A0A2K3L391\|A0A2K3L391_TRIPR	1.0e-74	62.88	Carnitinyl-CoA dehydratase-like protein OS=Trifolium pratense OX=57577 GN=L195_g...	[more]
tr\|A0A1S2XQS0\|A0A1S2XQS0_CICAR	3.1e-74	62.01	enoyl-CoA delta isomerase 1, peroxisomal-like OS=Cicer arietinum OX=3827 GN=LOC1...	[more]
tr\|A0A218XRF2\|A0A218XRF2_PUNGR	1.5e-73	59.31	Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr022635 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0008152	metabolic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0003824	catalytic activity

Vocabulary: **INTERPRO**
Term	Definition
IPR029045	ClpP/crotonase-like_dom_sf
IPR001753	Enoyl-CoA_hydra/iso

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003824	catalytic activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg02358-RA	Carg02358-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.90.226.10		coord: 1..228 e-value: 1.4E-37 score: 131.3
None	No IPR available	PANTHER	PTHR11941:SF84	ENOYL-COA DELTA ISOMERASE 1, PEROXISOMAL	coord: 1..235
None	No IPR available	PANTHER	PTHR11941	ENOYL-COA HYDRATASE-RELATED	coord: 1..235
None	No IPR available	CDD	cd06558	crotonase-like	coord: 2..204 e-value: 8.55693E-26 score: 99.5572
IPR001753	Enoyl-CoA hydratase/isomerase	PFAM	PF00378	ECH_1	coord: 55..206 e-value: 3.8E-18 score: 65.6
IPR029045	ClpP/crotonase-like domain superfamily	SUPERFAMILY	SSF52096	ClpP/crotonase	coord: 4..210

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg02358	Cla004686	Watermelon (97103) v1	carwmB0246
Carg02358	Csa5G512900	Cucumber (Chinese Long) v2	carcuB0294
Carg02358	MELO3C025448	Melon (DHL92) v3.5.1	carmeB0260
Carg02358	ClCG09G020040	Watermelon (Charleston Gray)	carwcgB0249
Carg02358	CSPI05G17490	Wild cucumber (PI 183967)	carcpiB0298
Carg02358	Cucsa.002680	Cucumber (Gy14) v1	carcgyB0303
Carg02358	CmaCh15G004040	Cucurbita maxima (Rimu)	carcmaB0362
Carg02358	CmoCh15G004170	Cucurbita moschata (Rifu)	carcmoB0362
Carg02358	Lsi02G016600	Bottle gourd (USVL1VR-Ls)	carlsiB232
Carg02358	Cp4.1LG13g09650	Cucurbita pepo (Zucchini)	carcpeB0366
Carg02358	CsGy5G017120	Cucumber (Gy14) v2	carcgybB0281
Carg02358	MELO3C025448.2	Melon (DHL92) v3.6.1	carmedB0270
Carg02358	CsaV3_5G026420	Cucumber (Chinese Long) v3	carcucB0297
Carg02358	Bhi06G000631	Wax gourd	carwgoB0340

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg02358	Cucumber (Chinese Long) v3	carcucB0299
Carg02358	Bottle gourd (USVL1VR-Ls)	carlsiB241
Carg02358	Melon (DHL92) v3.5.1	carmeB0264
Carg02358	Melon (DHL92) v3.6.1	carmedB0275
Carg02358	Watermelon (Charleston Gray)	carwcgB0261
Carg02358	Watermelon (97103) v1	carwmB0253
Carg02358	Watermelon (97103) v2	carwmbB0267
Carg02358	Watermelon (97103) v2	carwmbB0270
Carg02358	Watermelon (97103) v2	carwmbB0271
Carg02358	Watermelon (97103) v2	carwmbB0279
Carg02358	Wax gourd	carwgoB0354
Carg02358	Silver-seed gourd	carcarB303
Carg02358	Silver-seed gourd	carcarB306
Carg02358	Silver-seed gourd	carcarB310
Carg02358	Cucumber (Gy14) v2	carcgybB0283
Carg02358	Cucumber (Gy14) v1	carcgyB0312
Carg02358	Cucurbita maxima (Rimu)	carcmaB0371
Carg02358	Cucurbita maxima (Rimu)	carcmaB0373
Carg02358	Cucurbita maxima (Rimu)	carcmaB0374
Carg02358	Cucurbita moschata (Rifu)	carcmoB0368
Carg02358	Cucurbita moschata (Rifu)	carcmoB0369
Carg02358	Cucurbita moschata (Rifu)	carcmoB0370
Carg02358	Cucurbita pepo (Zucchini)	carcpeB0371
Carg02358	Cucurbita pepo (Zucchini)	carcpeB0372
Carg02358	Cucurbita pepo (Zucchini)	carcpeB0374
Carg02358	Cucurbita pepo (Zucchini)	carcpeB0377
Carg02358	Wild cucumber (PI 183967)	carcpiB0300
Carg02358	Cucumber (Chinese Long) v2	carcuB0296