Carg02353 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg02353
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	CASP-like protein
Location	Cucurbita_argyrosperma_scaffold_007 : 1326566 .. 1327005 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTACATATTATACACTAAATGATTCTTATAGGTACATGCTTGCTACTATCATCGTCGGGGTTGTATTCAACCTCTTGCAGATCGCGTTCTCCCTCTTTAATATCGTTAAGAATCGAAACGGTACCATACTATTTGATTTCTTTGGCGACAAGGTACATTCAAAACAAACATTCGGTGTCGTGTCGTGTCGTGTGTGAGTCAAATGATTCTTTAGCGTGCAACGATTTTGGTGCAGTTTTTGTCGTATCTTCTAGCAACAAGCACAGCAGCTGGGTTTGGAGTTTCAGTGGATTTGCAAAGAACAAAGGACCCAGAGGATTTGTTTGGAACGTTCTTTGGTAAGGCATATGCAACCTCAGCTCTTCTCTTATTTGCATTCTTTTGTTCTGCCGCTGTCTCTATTCTCTCTTCCTTTGCGTTCTCAAAAAGACCTTAA

mRNA sequence

ATGGGTACATATTATACACTAAATGATTCTTATAGGTACATGCTTGCTACTATCATCGTCGGGGTTGTATTCAACCTCTTGCAGATCGCGTTCTCCCTCTTTAATATCGTTAAGAATCGAAACGGTACCATACTATTTGATTTCTTTGGCGACAAGTTTTTGTCGTATCTTCTAGCAACAAGCACAGCAGCTGGGTTTGGAGTTTCAGTGGATTTGCAAAGAACAAAGGACCCAGAGGATTTGTTTGGAACGTTCTTTGGTAAGGCATATGCAACCTCAGCTCTTCTCTTATTTGCATTCTTTTGTTCTGCCGCTGTCTCTATTCTCTCTTCCTTTGCGTTCTCAAAAAGACCTTAA

Coding sequence (CDS)

ATGGGTACATATTATACACTAAATGATTCTTATAGGTACATGCTTGCTACTATCATCGTCGGGGTTGTATTCAACCTCTTGCAGATCGCGTTCTCCCTCTTTAATATCGTTAAGAATCGAAACGGTACCATACTATTTGATTTCTTTGGCGACAAGTTTTTGTCGTATCTTCTAGCAACAAGCACAGCAGCTGGGTTTGGAGTTTCAGTGGATTTGCAAAGAACAAAGGACCCAGAGGATTTGTTTGGAACGTTCTTTGGTAAGGCATATGCAACCTCAGCTCTTCTCTTATTTGCATTCTTTTGTTCTGCCGCTGTCTCTATTCTCTCTTCCTTTGCGTTCTCAAAAAGACCTTAA

Protein sequence

MGTYYTLNDSYRYMLATIIVGVVFNLLQIAFSLFNIVKNRNGTILFDFFGDKFLSYLLATSTAAGFGVSVDLQRTKDPEDLFGTFFGKAYATSALLLFAFFCSAAVSILSSFAFSKRP

Homology

[Close]

BLAST of Carg02353 vs. NCBI nr
Match: XP_022939491.1 (CASP-like protein 4D1 [Cucurbita moschata])

HSP 1 Score: 193.7 bits (491), Expect = 3.4e-46
Identity = 102/109 (93.58%), Postives = 105/109 (96.33%), Query Frame = 0


Query: 10  SYRYMLATIIVGVVFNLLQIAFSLFNIVKNRNGTILFDFFGDKFLSYLLATSTAAGFGVS 69
           +YRY+LATIIV +VFNLLQIAFSLFNIVKNRNGTILFDFFGDKFLSYLLATSTAAGFGVS
Sbjct: 48  TYRYVLATIIVEIVFNLLQIAFSLFNIVKNRNGTILFDFFGDKFLSYLLATSTAAGFGVS 107

Query: 70  VDLQRTKDPEDLFGTFFGKAYATSALLLFAFFCSAAVSILSSFAFSKRP 119
           VDLQRTKDPEDLFGTFF KAYA SALLLFAFFCSAAVSILSSFA SKRP
Sbjct: 108 VDLQRTKDPEDLFGTFFDKAYAASALLLFAFFCSAAVSILSSFALSKRP 156

[Close]

BLAST of Carg02353 vs. NCBI nr
Match: XP_022992767.1 (CASP-like protein 4D1 [Cucurbita maxima])

HSP 1 Score: 174.5 bits (441), Expect = 2.2e-40
Identity = 93/109 (85.32%), Postives = 99/109 (90.83%), Query Frame = 0


Query: 10  SYRYMLATIIVGVVFNLLQIAFSLFNIVKNRNGTILFDFFGDKFLSYLLATSTAAGFGVS 69
           +YRY+LATII+G+VFNLLQIAFSLFNIVK   GTILFDFFGDKFLSYLLAT TAAGFG+S
Sbjct: 48  TYRYVLATIIIGIVFNLLQIAFSLFNIVKGATGTILFDFFGDKFLSYLLATGTAAGFGLS 107

Query: 70  VDLQRTKDPEDLFGTFFGKAYATSALLLFAFFCSAAVSILSSFAFSKRP 119
           VDLQ T DP+D FGTFF KAYA SALLLFAFFCSAAVSILSSFA SKRP
Sbjct: 108 VDLQ-TLDPDDYFGTFFDKAYAASALLLFAFFCSAAVSILSSFALSKRP 155

[Close]

BLAST of Carg02353 vs. NCBI nr
Match: XP_023549516.1 (CASP-like protein 4D1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 173.7 bits (439), Expect = 3.7e-40
Identity = 92/109 (84.40%), Postives = 99/109 (90.83%), Query Frame = 0


Query: 10  SYRYMLATIIVGVVFNLLQIAFSLFNIVKNRNGTILFDFFGDKFLSYLLATSTAAGFGVS 69
           +YRY+LATII+G+VFNLLQIAFSLFNIVK   GTILFDFFGDKFLSYLLAT TAAGFG+S
Sbjct: 48  TYRYVLATIIIGIVFNLLQIAFSLFNIVKGATGTILFDFFGDKFLSYLLATGTAAGFGLS 107

Query: 70  VDLQRTKDPEDLFGTFFGKAYATSALLLFAFFCSAAVSILSSFAFSKRP 119
           VDLQ T DP+D FGTFF KAYA SALLLFAFFCSAAVSI+SSFA SKRP
Sbjct: 108 VDLQ-TLDPDDYFGTFFDKAYAASALLLFAFFCSAAVSIISSFALSKRP 155

[Close]

BLAST of Carg02353 vs. NCBI nr
Match: XP_022939492.1 (CASP-like protein 4D1 [Cucurbita moschata])

HSP 1 Score: 171.8 bits (434), Expect = 1.4e-39
Identity = 92/109 (84.40%), Postives = 98/109 (89.91%), Query Frame = 0


Query: 10  SYRYMLATIIVGVVFNLLQIAFSLFNIVKNRNGTILFDFFGDKFLSYLLATSTAAGFGVS 69
           +YRY+LATII+GVVFNLLQIAFSL NIVK   GTILFDFFGDKFLSYLLAT TAAGFG+S
Sbjct: 48  TYRYVLATIIIGVVFNLLQIAFSLLNIVKGATGTILFDFFGDKFLSYLLATGTAAGFGLS 107

Query: 70  VDLQRTKDPEDLFGTFFGKAYATSALLLFAFFCSAAVSILSSFAFSKRP 119
           VDLQ T DP+D FGTFF KAYA SALLLFAFFCSAAVSI+SSFA SKRP
Sbjct: 108 VDLQ-TLDPDDYFGTFFDKAYAASALLLFAFFCSAAVSIISSFALSKRP 155

[Close]

BLAST of Carg02353 vs. NCBI nr
Match: XP_008458890.1 (PREDICTED: CASP-like protein 4D1 [Cucumis melo])

HSP 1 Score: 169.1 bits (427), Expect = 9.1e-39
Identity = 91/107 (85.05%), Postives = 98/107 (91.59%), Query Frame = 0


Query: 11  YRYMLATIIVGVVFNLLQIAFSLFNIVKNRNGTILFDFFGDKFLSYLLATSTAAGFGVSV 70
           +RYMLATII+G+VFNLLQIAFSLFNIVKN +GTILFDFFGDKFLSYLLAT  AAGFGV V
Sbjct: 49  FRYMLATIIIGLVFNLLQIAFSLFNIVKNGDGTILFDFFGDKFLSYLLATGAAAGFGVGV 108

Query: 71  DLQRTKDPEDLFGTFFGKAYATSALLLFAFFCSAAVSILSSFAFSKR 118
           DL++ KDP+DLF TFF KAYA SALLLFAFFCSAAVSILSSFA SKR
Sbjct: 109 DLKK-KDPDDLFRTFFDKAYAASALLLFAFFCSAAVSILSSFALSKR 154

[Close]

BLAST of Carg02353 vs. TAIR10
Match: AT2G39530.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 92.0 bits (227), Expect = 2.6e-19
Identity = 56/117 (47.86%), Postives = 74/117 (63.25%), Query Frame = 0


Query: 10  SYRYMLATIIVGVVFNLLQ--IAFSLFNIVKNRNGTILFDFFGDKFLSYLLATSTAAGFG 69
           +YRYML+  ++G+V+ ++Q  +  S F   K    T  FDF+GDK +SYLLAT +AAGFG
Sbjct: 58  AYRYMLSAAVIGLVYAVVQLFLTISQFATGKTHPLTYQFDFYGDKVISYLLATGSAAGFG 117

Query: 70  VSVDLQRTK------DPEDLFGTFFGKAYATSALLLFAFFCSAAVSILSSFAFSKRP 119
           VS DL+ T       D  D    FF K YA+++LLLFAF   A +S+ SS A SKRP
Sbjct: 118 VSKDLKDTYIALIEFDSTDPVDKFFSKGYASASLLLFAFVSLAVLSVFSSLALSKRP 174

[Close]

BLAST of Carg02353 vs. TAIR10
Match: AT2G39518.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 90.1 bits (222), Expect = 9.7e-19
Identity = 54/117 (46.15%), Postives = 77/117 (65.81%), Query Frame = 0


Query: 10  SYRYMLATIIVGVVFNLLQIAFSLFNI---VKNRNGTILFDFFGDKFLSYLLATSTAAGF 69
           +YRYML+  ++G+V+ ++Q+ F++      VKN     L DF+GDK +SYL+AT +AAGF
Sbjct: 58  AYRYMLSAAVIGLVYAVIQLFFTISEFATGVKNPFNYQL-DFYGDKLISYLVATGSAAGF 117

Query: 70  GVSVDLQRT------KDPEDLFGTFFGKAYATSALLLFAFFCSAAVSILSSFAFSKR 118
           GV+ DL+ T       D  D    FF K YA+++LLLFAF C A +S+ SSFA +KR
Sbjct: 118 GVTKDLKDTFLALVALDSTDPVDKFFSKGYASASLLLFAFICLAVLSVFSSFAMAKR 173

[Close]

BLAST of Carg02353 vs. Swiss-Prot
Match: sp|B9SXY8|CSPLE_RICCO (CASP-like protein 4D1 OS=Ricinus communis OX=3988 GN=RCOM_1206790 PE=3 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.2e-18
Identity = 49/113 (43.36%), Postives = 74/113 (65.49%), Query Frame = 0


Query: 10  SYRYMLATIIVGVVFNLLQIAFSLF-----NIVKNRNGTILFDFFGDKFLSYLLATSTAA 69
           +YRYMLATI++G+ + +LQIAF+L+     N + + +G + FDFFGDK +SY+L T  AA
Sbjct: 55  AYRYMLATIVIGLAYTVLQIAFTLYYVATGNRMMSGDGNLAFDFFGDKVISYILVTGAAA 114

Query: 70  GFGVSVDLQRTKDPEDLFGTFFGKAYATSALLLFAFFCSAAVSILSSFAFSKR 118
           GF  + D++        F  F  K YA+++LLL  F C+A +S+ SS+A  K+
Sbjct: 115 GFASTKDIKPVFSGSGDFDAFINKGYASASLLLIGFVCTAVLSVFSSYALPKQ 167

[Close]

BLAST of Carg02353 vs. Swiss-Prot
Match: sp|Q8GWD5|CSPLC_ARATH (CASP-like protein 4D1 OS=Arabidopsis thaliana OX=3702 GN=At2g39530 PE=2 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 4.6e-18
Identity = 56/117 (47.86%), Postives = 74/117 (63.25%), Query Frame = 0


Query: 10  SYRYMLATIIVGVVFNLLQ--IAFSLFNIVKNRNGTILFDFFGDKFLSYLLATSTAAGFG 69
           +YRYML+  ++G+V+ ++Q  +  S F   K    T  FDF+GDK +SYLLAT +AAGFG
Sbjct: 58  AYRYMLSAAVIGLVYAVVQLFLTISQFATGKTHPLTYQFDFYGDKVISYLLATGSAAGFG 117

Query: 70  VSVDLQRTK------DPEDLFGTFFGKAYATSALLLFAFFCSAAVSILSSFAFSKRP 119
           VS DL+ T       D  D    FF K YA+++LLLFAF   A +S+ SS A SKRP
Sbjct: 118 VSKDLKDTYIALIEFDSTDPVDKFFSKGYASASLLLFAFVSLAVLSVFSSLALSKRP 174

[Close]

BLAST of Carg02353 vs. Swiss-Prot
Match: sp|C6T1Z6|CSPLC_SOYBN (CASP-like protein 4D1 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.0e-17
Identity = 58/123 (47.15%), Postives = 79/123 (64.23%), Query Frame = 0


Query: 2   GTYYTLND--SYRYMLATIIVGVVFNLLQIAFSLFNIVK-NR----NGTILFDFFGDKFL 61
           G     ND  +YRYM++TII+G  +NLLQ+A S+F +V  NR    +G  LFDFFGDK +
Sbjct: 50  GVEIKFNDIYAYRYMISTIIIGFAYNLLQMALSIFTVVSGNRVLSGDGGYLFDFFGDKII 109

Query: 62  SYLLATSTAAGFGVSVDLQRTKDPEDLFGTFFGKAYATSALLLFAFFCSAAVSILSSFAF 118
           SYLL + +AAGFGV+V+L R         +F  KA A+++LLL AF  +A  S  +SFA 
Sbjct: 110 SYLLISGSAAGFGVTVELGRGVPS----NSFMDKANASASLLLIAFLFTAVASTFTSFAL 168

[Close]

BLAST of Carg02353 vs. Swiss-Prot
Match: sp|Q56X75|CSPLB_ARATH (CASP-like protein 4D2 OS=Arabidopsis thaliana OX=3702 GN=At2g39518 PE=2 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 1.8e-17
Identity = 54/117 (46.15%), Postives = 77/117 (65.81%), Query Frame = 0


Query: 10  SYRYMLATIIVGVVFNLLQIAFSLFNI---VKNRNGTILFDFFGDKFLSYLLATSTAAGF 69
           +YRYML+  ++G+V+ ++Q+ F++      VKN     L DF+GDK +SYL+AT +AAGF
Sbjct: 58  AYRYMLSAAVIGLVYAVIQLFFTISEFATGVKNPFNYQL-DFYGDKLISYLVATGSAAGF 117

Query: 70  GVSVDLQRT------KDPEDLFGTFFGKAYATSALLLFAFFCSAAVSILSSFAFSKR 118
           GV+ DL+ T       D  D    FF K YA+++LLLFAF C A +S+ SSFA +KR
Sbjct: 118 GVTKDLKDTFLALVALDSTDPVDKFFSKGYASASLLLFAFICLAVLSVFSSFAMAKR 173

[Close]

BLAST of Carg02353 vs. Swiss-Prot
Match: sp|D7LD60|CSPLK_ARALL (CASP-like protein 4D1 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_903205 PE=3 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 2.5e-16
Identity = 50/117 (42.74%), Postives = 73/117 (62.39%), Query Frame = 0


Query: 10  SYRYMLATIIVGVVFNLLQIAFSLFNIVKNRNGTI--LFDFFGDKFLSYLLATSTAAGFG 69
           +YRYML+  ++G+++ ++Q+  ++          +   F+F+GDK +SYLLAT +AAGFG
Sbjct: 58  AYRYMLSAAVIGLLYAVVQLFLTISQFATGTTHPLNYQFNFYGDKIISYLLATGSAAGFG 117

Query: 70  VSVDLQRT------KDPEDLFGTFFGKAYATSALLLFAFFCSAAVSILSSFAFSKRP 119
           VS DL+ T       D  D    FF K YA+++LLLFAF   A +S+ SS A SKRP
Sbjct: 118 VSKDLKETFLALIEFDSTDPVDKFFSKGYASASLLLFAFVSLAVLSVFSSLALSKRP 174

[Close]

BLAST of Carg02353 vs. TrEMBL
Match: tr|A0A1S3C9H1|A0A1S3C9H1_CUCME (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103498162 PE=3 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 6.0e-39
Identity = 91/107 (85.05%), Postives = 98/107 (91.59%), Query Frame = 0


Query: 11  YRYMLATIIVGVVFNLLQIAFSLFNIVKNRNGTILFDFFGDKFLSYLLATSTAAGFGVSV 70
           +RYMLATII+G+VFNLLQIAFSLFNIVKN +GTILFDFFGDKFLSYLLAT  AAGFGV V
Sbjct: 49  FRYMLATIIIGLVFNLLQIAFSLFNIVKNGDGTILFDFFGDKFLSYLLATGAAAGFGVGV 108

Query: 71  DLQRTKDPEDLFGTFFGKAYATSALLLFAFFCSAAVSILSSFAFSKR 118
           DL++ KDP+DLF TFF KAYA SALLLFAFFCSAAVSILSSFA SKR
Sbjct: 109 DLKK-KDPDDLFRTFFDKAYAASALLLFAFFCSAAVSILSSFALSKR 154

[Close]

BLAST of Carg02353 vs. TrEMBL
Match: tr|A0A0A0KU83|A0A0A0KU83_CUCSA (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G515010 PE=3 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 4.3e-37
Identity = 88/107 (82.24%), Postives = 95/107 (88.79%), Query Frame = 0


Query: 11  YRYMLATIIVGVVFNLLQIAFSLFNIVKNRNGTILFDFFGDKFLSYLLATSTAAGFGVSV 70
           +RYMLATII+G+VFNLLQIAFSLFNIVKN +GTILFDFFGDKFLSYLLAT  AAGFGV V
Sbjct: 49  FRYMLATIIIGLVFNLLQIAFSLFNIVKNGDGTILFDFFGDKFLSYLLATGAAAGFGVGV 108

Query: 71  DLQRTKDPEDLFGTFFGKAYATSALLLFAFFCSAAVSILSSFAFSKR 118
           DL++  DP+DLF  FF KAYA S LLLFAFFCSAAVSILSSFA SKR
Sbjct: 109 DLKKV-DPDDLFRIFFDKAYAASTLLLFAFFCSAAVSILSSFALSKR 154

[Close]

BLAST of Carg02353 vs. TrEMBL
Match: tr|M5XNH4|M5XNH4_PRUPE (CASP-like protein OS=Prunus persica OX=3760 GN=PRUPE_2G233900 PE=3 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.5e-21
Identity = 55/113 (48.67%), Postives = 82/113 (72.57%), Query Frame = 0


Query: 10  SYRYMLATIIVGVVFNLLQIAFSLFNIVKNRNGTILFDFFGDKFLSYLLATSTAAGFGVS 69
           +YRYML+TI++G  ++LLQ+A S+ N+V  ++G +L DFFGDK +SYLLA+ T AGF ++
Sbjct: 70  AYRYMLSTIVIGTAYSLLQLALSIHNVVSGQDGILLLDFFGDKLISYLLASGTGAGFAIT 129

Query: 70  VDLQRTKDPEDLFG-----TFFGKAYATSALLLFAFFCSAAVSILSSFAFSKR 118
           VD +R  D + LF       F+ KAYA+++LLL AF C+A +SI+SS+   K+
Sbjct: 130 VDTKRLTDADPLFDMIDIREFYDKAYASASLLLLAFCCTAMLSIISSYTLPKK 182

[Close]

BLAST of Carg02353 vs. TrEMBL
Match: tr|A0A2P6SK96|A0A2P6SK96_ROSCH (CASP-like protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0366551 PE=3 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 3.3e-21
Identity = 57/109 (52.29%), Postives = 79/109 (72.48%), Query Frame = 0


Query: 10  SYRYMLATIIVGVVFNLLQIAFSLFNIVKNRNGTILFDFFGDKFLSYLLATSTAAGFGVS 69
           +YRYMLATI++G  ++LLQ+  S+   V  R G ++  FFGDKF+SY+LAT  AAGFGV+
Sbjct: 55  AYRYMLATIVIGTAYSLLQLVASICTAVSGREGILVLAFFGDKFMSYVLATGAAAGFGVT 114

Query: 70  VDLQRTKDPEDL-FGTFFGKAYATSALLLFAFFCSAAVSILSSFAFSKR 118
           VDL+R  D E L    F+ KAYA+++LLL AF C+A +SI+S+F   +R
Sbjct: 115 VDLKRITDAEGLEMSKFYEKAYASASLLLLAFICTAVLSIISAFILPRR 163

[Close]

BLAST of Carg02353 vs. TrEMBL
Match: tr|A0A1S3C911|A0A1S3C911_CUCME (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103498157 PE=3 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 2.8e-20
Identity = 59/110 (53.64%), Postives = 75/110 (68.18%), Query Frame = 0


Query: 9   DSYRYMLATIIVGVVFNLLQIAFSLFNIVKNRNGTILFDFFGDKFLSYLLATSTAAGFGV 68
           +SYRY +ATII+G  FNLLQIA +L+ +V   +G+ILFDF+GDK LSY L    AA  G 
Sbjct: 47  NSYRYAMATIIIGGAFNLLQIALALYRLVTKTDGSILFDFYGDKVLSYFLLAGAAAALGS 106

Query: 69  SVDLQRTKDPEDLFGTFFGKAYATSALLLFAFFCSAAVSILSSFAFSKRP 119
           SVDL   K   D+  +FF +  A +ALLL AF CSA +S+LSS A S +P
Sbjct: 107 SVDL---KANMDMLNSFFDQGNAAAALLLLAFLCSAIISVLSSLALSNKP 153

The following BLAST results are available for this feature:

BLAST of Carg02353 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022939491.1	3.4e-46	93.58	CASP-like protein 4D1 [Cucurbita moschata]	[more]
XP_022992767.1	2.2e-40	85.32	CASP-like protein 4D1 [Cucurbita maxima]	[more]
XP_023549516.1	3.7e-40	84.40	CASP-like protein 4D1 [Cucurbita pepo subsp. pepo]	[more]
XP_022939492.1	1.4e-39	84.40	CASP-like protein 4D1 [Cucurbita moschata]	[more]
XP_008458890.1	9.1e-39	85.05	PREDICTED: CASP-like protein 4D1 [Cucumis melo]	[more]

BLAST of Carg02353 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G39530.1	2.6e-19	47.86	Uncharacterised protein family (UPF0497)	[more]
AT2G39518.1	9.7e-19	46.15	Uncharacterised protein family (UPF0497)	[more]

BLAST of Carg02353 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|B9SXY8\|CSPLE_RICCO	1.2e-18	43.36	CASP-like protein 4D1 OS=Ricinus communis OX=3988 GN=RCOM_1206790 PE=3 SV=1	[more]
sp\|Q8GWD5\|CSPLC_ARATH	4.6e-18	47.86	CASP-like protein 4D1 OS=Arabidopsis thaliana OX=3702 GN=At2g39530 PE=2 SV=1	[more]
sp\|C6T1Z6\|CSPLC_SOYBN	1.0e-17	47.15	CASP-like protein 4D1 OS=Glycine max OX=3847 PE=2 SV=1	[more]
sp\|Q56X75\|CSPLB_ARATH	1.8e-17	46.15	CASP-like protein 4D2 OS=Arabidopsis thaliana OX=3702 GN=At2g39518 PE=2 SV=1	[more]
sp\|D7LD60\|CSPLK_ARALL	2.5e-16	42.74	CASP-like protein 4D1 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT...	[more]

BLAST of Carg02353 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C9H1\|A0A1S3C9H1_CUCME	6.0e-39	85.05	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103498162 PE=3 SV=1	[more]
tr\|A0A0A0KU83\|A0A0A0KU83_CUCSA	4.3e-37	82.24	CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G515010 PE=3 SV=1	[more]
tr\|M5XNH4\|M5XNH4_PRUPE	2.5e-21	48.67	CASP-like protein OS=Prunus persica OX=3760 GN=PRUPE_2G233900 PE=3 SV=1	[more]
tr\|A0A2P6SK96\|A0A2P6SK96_ROSCH	3.3e-21	52.29	CASP-like protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0366551 PE=3 SV=1	[more]
tr\|A0A1S3C911\|A0A1S3C911_CUCME	2.8e-20	53.64	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103498157 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006702	CASP_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg02353-RA	Carg02353-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 5..102 e-value: 2.3E-10 score: 40.3
None	No IPR available	PANTHER	PTHR11615:SF148	CASP-LIKE PROTEIN 4D1-RELATED	coord: 10..117
None	No IPR available	PANTHER	PTHR11615	NITRATE, FROMATE, IRON DEHYDROGENASE	coord: 10..117

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg02353	Cp4.1LG13g09520	Cucurbita pepo (Zucchini)	carcpeB0366

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg02353	Watermelon (97103) v2	carwmbB0270
Carg02353	Watermelon (97103) v2	carwmbB0271
Carg02353	Watermelon (97103) v2	carwmbB0279
Carg02353	Silver-seed gourd	carcarB303
Carg02353	Silver-seed gourd	carcarB306
Carg02353	Silver-seed gourd	carcarB310
Carg02353	Cucumber (Gy14) v2	carcgybB0281
Carg02353	Cucumber (Gy14) v1	carcgyB0312
Carg02353	Cucumber (Gy14) v1	carcgyB0315
Carg02353	Cucurbita maxima (Rimu)	carcmaB0362
Carg02353	Cucurbita maxima (Rimu)	carcmaB0371
Carg02353	Cucurbita maxima (Rimu)	carcmaB0373
Carg02353	Cucurbita maxima (Rimu)	carcmaB0374
Carg02353	Cucurbita moschata (Rifu)	carcmoB0362
Carg02353	Cucurbita moschata (Rifu)	carcmoB0368
Carg02353	Cucurbita moschata (Rifu)	carcmoB0369
Carg02353	Cucurbita moschata (Rifu)	carcmoB0370
Carg02353	Cucurbita pepo (Zucchini)	carcpeB0372
Carg02353	Cucurbita pepo (Zucchini)	carcpeB0374
Carg02353	Wild cucumber (PI 183967)	carcpiB0298
Carg02353	Wild cucumber (PI 183967)	carcpiB0300
Carg02353	Cucumber (Chinese Long) v2	carcuB0294
Carg02353	Cucumber (Chinese Long) v2	carcuB0296
Carg02353	Cucumber (Chinese Long) v3	carcucB0297
Carg02353	Bottle gourd (USVL1VR-Ls)	carlsiB232
Carg02353	Bottle gourd (USVL1VR-Ls)	carlsiB241
Carg02353	Melon (DHL92) v3.5.1	carmeB0260
Carg02353	Melon (DHL92) v3.5.1	carmeB0264
Carg02353	Melon (DHL92) v3.6.1	carmedB0270
Carg02353	Melon (DHL92) v3.6.1	carmedB0275
Carg02353	Watermelon (Charleston Gray)	carwcgB0249
Carg02353	Watermelon (Charleston Gray)	carwcgB0261
Carg02353	Watermelon (97103) v1	carwmB0246
Carg02353	Watermelon (97103) v1	carwmB0253