Carg02242 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg02242
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	KH domain-containing protein
Location	Cucurbita_argyrosperma_scaffold_007 : 808972 .. 814533 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGAAAATCAGTTCCAAATATTTTCGTGGCAAAGTGCAATTTAGCGAAAGAAAAATCAAAACCCTAGACTCCGTCACAGAAAGTAAGTCCCGAGAATCAACGATCGTTCCTAAAACTCTCGATTGCGCGCAATCGGTCTTCGCCTCCCATTGCCCTCGTTTTTCTTCATTATCTGACAATTTTCAGGTTGATTCATTATCTTTAGCTTGTAAATTTCTTAATTTCTACGTCTTTCCCGTTCCGGATTTTGGATTCTGTTTTCGGTACCGATTGTTTCATTCGTTGTTGCTCAATTCTGCGATCCTTTTGCGTTATGGTTGTATTCATTGTCTCGCTGTAATTACGCGGGACTGATGGTGCGGACGAATCGAGATCTAAACTTGTTTTCTTATATCCTGTTGCAGTTGGTTAGATTTACTTTTTCCGAAATTGTTTTCCTGCTTTTCGCTAATTTAACAAGAGCACTGCTCGGGAACAAAGTTTCTTATAGACGTCGAAAGAAGGCTAGAAATTGTCGTTCCTGCAGAAAGAAAACGAATTTCTGTCATGAAAGTAGCGACCTACAATCTTGCGTAATTCCTTGAATATATTGTTTCCTATTTCCTAGAGTTTTGTTACAACCAGCCGTCTTGTTGTGCAGTATGGGGTTAACATTTAATACCGGTTTATGGTATAAACCTAGTATTAACTAATATATTTATGCTATAACTGGTTCTCTTTTCTTATTATTGGCCTAAAACTTGAGTTTTTTGAGATTTTTACTGAGCAAGCTGCTTCCTTAGATGTGTATTATTACTGATATTGGACCATTTTCTTGTGGTGTGTTTTACGCACATGTGATGTGTTTTACGCACATGTGATGTGTAGCATATATGTTCAAATTATGATTTAGCTGGGATATGTTATGGCTGTTTGTGTTCTCTGTTGTCTTTTAATTTCTGGTTTACTCACATCTTCCGTTTTTTTTATGTGTGTAGACAGATATAACCAGTTTTTAAGTTCATGGCTGGTCAGAGGAATAGTTACGGAAAGCGTAATCGTTCTCAGTCTGATTATTCTGAAAATGGAGGGAACAAAAGAAGAAGTCACGGTGAGGACCGGGACCAGTTTATTATAGATCCAGAAGATACTGTTTACCGGTATTTGTGCCCTGTTAAAAAGATTGGAAGTGTTATTGGAAGGGGAGGTGAGATAGTGAAGCAGTTAAGGATAGATACTAAATCAAAGATTAGAATTGGAGAAACAGTGCCTGGATCTGATGAGCGTGTCATAACAATCTACAGCGCAAGCAATGAGGCTAATGCTTTGGAAGACAGTAGTGATTATAGTTCTCCAGCTCAGCAGGCTTTGTTCAAAGTCCACCATAGAGTTGTGGCCGATGACCTAATGGGCGAGGAATCTGAAGGAGGAAGTCACCAGGTTACAGCTAGACTTCTTGTACCCTCTGATCAAATTGGTTGTATTATTGGGAAAGGTGGGCAGATTGTCCAGAATATTCGCACTGAGACTGGGGCCCTGATTCGCATTCTTAAGGATGATCATTTACCCCGTTGTGCTCTGAGTTCTGATGAACTTGTGCAGGTAAGTGGATGGCTTTCACTAAATTTTATTGTTTGCATTTCTGAGTTTTTTTAAGTTCATGCCTTTTTTTCTGTTGTAGCATCTTAATTTAGTTGTGTTTCAGATATCTGGTGAACCCCCGATTGTGGAGAAAGCCTTATACCAGATTGCATCTAGACTGCATGAAAATCCTTCACGATCTCAGCATCTACTTGCTTCTGCCATACCTGGTGTATATCCTTCTGGTGGTTCGCTTGTGGCTTCTACACATGGTGCTCCAATTATGGGTTTAGCTCCTTTGGTCAGTCCATATGGAGGTTATAAAGGGGACAGTGGTAATTGGTCCAGGTCTTTATATTCAGCTCCAAGGGAAGAATTATCTTCAAAAGAATTTTCTCTTCGATTGATATGTCCAACCGAAAACATTGGAGGTGTCATTGGCAAAGGTGGAGCTGTAATCAATCAGATTAGACAGGAGACTAAGGCTGCCATAAAAGTTGATAGTTCAGCTACTGAAGAAGATGATTGTTTGATAAATATATCATCAAAGGAGGTCTAATCTAAGCTTTTATAACTTTGTCTATTGTTGGCTGTGGATCATACTTCTGACAGTTTTATTGTATACTGTTTCAGTTCTTTGAAGATTCATATTCTCCCACGCTGGAAGCTGCATTGCGCTTGCAACCAAGGTGCAGTGAGAAAGTAGAAAGAGATTCTGGAATTATTTCATTCACAACCCGTCTGCTTGTGCCTACCACACGAATTGGTTGCCTAATTGGTAAAGGTGGAGCTATCATTACCGAGTTGAGAAGGCTCACCAAAGCTAATATTCGAATACTGTCAAAGGAAAACCTCCCCAAGGTTGCCTTGGAAGATGATGAAATGGTGCAGGTAGTGGCTGTTAATTGATTTATATTAATTTTCCTGTTATGATGAACTCTCCCTTGTATTCCGTATTGCTTGTGTTGCGTTCGGTTAATTGTATTGTTTTTCTGATTAGATATCCGGGGATCTTGATGTTGCCAAGGAGGCTCTTGTTCATATAGTGACCAGGTTGAGAGCCAACCTTTTTGATAGAGAAGGTGCTCTGTCAGCTGTTCTGCCTGTTCTGCCGTATCTTCCTCTATCAGCTGATGGTTCAGAAAGTCTATATGATGGTAGAGAAGGCAAAAGACATGGGCGTGGGCATTCTTATTCTAGTAGTTATGGGGGTTTCACGGATTTGGCTGCTGGTGATGGTTATGGAAGTTACAGTGGCTCACAGGTACGTATATTAACCTTGACATGTCTAATTTTAGAGATGGTGAAAATGTATCCTTCTGCTTTTAGAAGGCTAATTTGCAGACAAGGTTTTGAAATTATTTCAGTTGTGCACCTTTAAGCGAAGTTTTTTTTTTTTTTTTTTTTTGCCATGATCATTTACCTATTATTGATCCAAATTTAATGCCGAGATTTCTAATTTGCAACTGAAGCCAAGCTTTTCCTTTGTAGATTGGTGGTGGTGGTAGTGCTTATGGGGCCTATGGAAGCTTTTCCATGGGACGAAGTGGTAGTTCAGGGTAAATTATTCTTTTCTTCTTCATTTAGTGGTGTTAATCTTGAAAGGAAGAATGGTTGACTTTGCTCAGTCGATGCACTCATTTGTTATTTGGTCAAATTAGATGTACGTAGGTTTTGTTCCTGTATTTTTTTTTTTTTTTTTTTCAGAAATCTTGTAAATCTTTCTAAATGAAATGAAGTGGCTTGAAGTAGCTAATGTGTAGGTGGAGTAACTCCCCCTCCAAAAACAAAAAAAAAAAGGGGTAGTAATCATGTGTTCACTTTTTCTTCAGGGTTTCTGGACAAGGCAATGTTTCTCGGAGGAGAAACTATTCCTAGATTTTGGTGGTCATTATTTACAGGTATGCTATTTCGTCTCCCCTGGGGGCAGGATTAAAGAGAGAAAATACGGAAGAAAAGATAACTTTTACCTGTTTAGAACATTCGCCAACACACCACTGACAATTGATAGTTTGATAAAAATAAGCTATCCGGTCTCCCTCTGCTCAAAATTCTGATACAGTTATTTTCCCCTTGCCTTTCCCTTCCCATTAAAACAGCTGAGATTTATGAAGCCTGAGGCCAGCCTACTGCCTTAACCTGAAGACCAGATGAACCAGGGTTTGACATATTCATGGCCCACCTTGATGCTACCTTTAGATGGACCATGCCTGAAGATCTTGTTGCTCTTAATTTTAACTCATCCACATACCAAGATGACCTTGCATAAGATCTTGAGCTCCTAATAACCTACTAGCCGAAATGCCTTGGTTTTTTGTTGTTTTTCCTTCTCAAAGATTGAACTATGAAACCGTGTTGACTTCCAGATTGGACAGATGTGGAGTTTTCGTTTTGTGTGGTTTACTGCTATAAGATTTGATTAGAACTCATGATGTGCACTCATTATCTCCTCAAAATTCTGTTTTATTTTTTCCTTTTTACCCTTGAGTGCACCCTATTCTGCATCGCCTCCTAAATGTGCTGGGATTAAATGTCGCACTCTGCTCTCTTGCACCCCCAATGGACATTCATTTTTATGGCGCTAAAACATTCCTACTTTACACTCTAATTTCTGAAAAAGGAAAAGGTTTGGTATCAAGCCTCAGGTTGGAACCTTTAGCGAGCTTAATAAGAAAAACCCTCGATGTTTCGGGTCTTGGCCTTGGGGTGGGTGCACCGGTGCCTTTGGGTTTGTGAGAGTGGGTCATCGGAAATATTGAGTTATAAAAAAAGAAGATGGTTTGAGAAGTAAGAAAACAAAAGGAAAGGGGTCAGTTTGATTTCTTATTCTTTTTGCTATATTCATTAAACACTGAATCTGGAAATACTATTTGCTTAAAGATGAATGCTGTTTTAGTTTATTATCCAGTAAGTGAAGAGACTATATTAAGGCCAGCCAGTGGCATTCTATACTTGACAGGGCAAGCTTGGTCCGCTATAGTTTGAAAATGCATTGGTTTGTTCATTGTTTATAGTGGTCAGGCAAGTTTTTGTAGGACTCATAATGCCTTGCAGTCTTTTTCGTTTCTTATATTATTTTGGATTTACAGTATTTTATCTTCAAAAGGATTTTTTCTGTCAACATAGCTATGAGGTCAAGCCGAAACATCTGTGCCAGGTTACTGGTACTGTTGGTACCTCAAAAAAGTACACCCTTCCTCTGTGCAAGGATATAACATTTTCTGACCCTTGAGATGGCCTGTGCTCTGAGTCTCTGGTCCTTGCATGGAAACTTGGCAGCTGGAAGTAATATTATTAGCTGTTGCTGAATGCAACTGGAGTTTTATACTCATTTTGACCTTGGAGTGTTTTAGAAAATGAATGTTTTAGGTAAACTGCTCGTACAGATTGTTAATGTTTGGAACGAAACTGAGTTCTTCGAGCTGTGAAGAGCTGTCTTCAAATCAAATGTGGCCTGACGACCCACAAACAATTCGAAGGTTAGTTTGGAGCTGATGGCAAGAATAGAGCAGGCTTGGACGAGAAGATTGAATTGATAGTTGAGGTAAATGGGGGAATGTTTTGTATTTTTCTTTTTAAATTTTATACAACTCTCGTAATGCTATTCTTTAAATCCATTTTAATGTACAAAATTGTGTGGCAGTTTGTGATGTGTATATGGCCGTGAAATCTATGTTTTTAAAAGGGAAGAAAATAAGTTAGCTCACCCTACAACAGTTGGACGTTATATTTTTATTTTCTCTGTGGTTGCAGCCTAATAATGTATAAAAATAAAAGCCTCTAGAATTCAAAACTTAAATCTACCTGTATCAAAGCAAGTGCTCCTACTCCCACTTGGGCATTTCAAAAAGCCCTAGTTGGATAACTCAGTTGGGTTTGTTGGCTGTTTTTTACGTTCTTATAAACTTTGAACGTGCTGGTCTTTTTATATGCATTTTTTTTTTTAATTATTATATGCATTTGTTTGAATTGTTCGTTCATTTTATTGTAGTTTATTTTTC

mRNA sequence

AAAGAAAATCAGTTCCAAATATTTTCGTGGCAAAGTGCAATTTAGCGAAAGAAAAATCAAAACCCTAGACTCCGTCACAGAAAGTAAGTCCCGAGAATCAACGATCGTTCCTAAAACTCTCGATTGCGCGCAATCGGTCTTCGCCTCCCATTGCCCTCGTTTTTCTTCATTATCTGACAATTTTCAGACAGATATAACCAGTTTTTAAGTTCATGGCTGGTCAGAGGAATAGTTACGGAAAGCGTAATCGTTCTCAGTCTGATTATTCTGAAAATGGAGGGAACAAAAGAAGAAGTCACGGTGAGGACCGGGACCAGTTTATTATAGATCCAGAAGATACTGTTTACCGGTATTTGTGCCCTGTTAAAAAGATTGGAAGTGTTATTGGAAGGGGAGGTGAGATAGTGAAGCAGTTAAGGATAGATACTAAATCAAAGATTAGAATTGGAGAAACAGTGCCTGGATCTGATGAGCGTGTCATAACAATCTACAGCGCAAGCAATGAGGCTAATGCTTTGGAAGACAGTAGTGATTATAGTTCTCCAGCTCAGCAGGCTTTGTTCAAAGTCCACCATAGAGTTGTGGCCGATGACCTAATGGGCGAGGAATCTGAAGGAGGAAGTCACCAGGTTACAGCTAGACTTCTTGTACCCTCTGATCAAATTGGTTGTATTATTGGGAAAGGTGGGCAGATTGTCCAGAATATTCGCACTGAGACTGGGGCCCTGATTCGCATTCTTAAGGATGATCATTTACCCCGTTGTGCTCTGAGTTCTGATGAACTTGTGCAGCATCTTAATTTAGTTGTGTTTCAGATATCTGGTGAACCCCCGATTGTGGAGAAAGCCTTATACCAGATTGCATCTAGACTGCATGAAAATCCTTCACGATCTCAGCATCTACTTGCTTCTGCCATACCTGGTGTATATCCTTCTGGTGGTTCGCTTGTGGCTTCTACACATGGTGCTCCAATTATGGGTTTAGCTCCTTTGGTCAGTCCATATGGAGGTTATAAAGGGGACAGTGGTAATTGGTCCAGGTCTTTATATTCAGCTCCAAGGGAAGAATTATCTTCAAAAGAATTTTCTCTTCGATTGATATGTCCAACCGAAAACATTGGAGGTGTCATTGGCAAAGGTGGAGCTGTAATCAATCAGATTAGACAGGAGACTAAGGCTGCCATAAAAGTTGATAGTTCAGCTACTGAAGAAGATGATTGTTTGATAAATATATCATCAAAGGAGTTCTTTGAAGATTCATATTCTCCCACGCTGGAAGCTGCATTGCGCTTGCAACCAAGGTGCAGTGAGAAAGTAGAAAGAGATTCTGGAATTATTTCATTCACAACCCGTCTGCTTGTGCCTACCACACGAATTGGTTGCCTAATTGGTAAAGGTGGAGCTATCATTACCGAGTTGAGAAGGCTCACCAAAGCTAATATTCGAATACTGTCAAAGGAAAACCTCCCCAAGGTTGCCTTGGAAGATGATGAAATGGTGCAGATATCCGGGGATCTTGATGTTGCCAAGGAGGCTCTTGTTCATATAGTGACCAGGTTGAGAGCCAACCTTTTTGATAGAGAAGGTGCTCTGTCAGCTGTTCTGCCTGTTCTGCCGTATCTTCCTCTATCAGCTGATGGTTCAGAAAGTCTATATGATGGTAGAGAAGGCAAAAGACATGGGCGTGGGCATTCTTATTCTAGTAGTTATGGGGGTTTCACGGATTTGGCTGCTGGTGATGGTTATGGAAGTTACAGTGGCTCACAGATTGGTGGTGGTGGTAGTGCTTATGGGGCCTATGGAAGCTTTTCCATGGGACGAAGTGGTAGTTCAGGGGTTTCTGGACAAGGCAATGTTTCTCGGAGGAGAAACTATTCCTAGATTTTGGTGGTCATTATTTACAGGTATGCTATTTCGTCTCCCCTGGGGGCAGGATTAAAGAGAGAAAATACGGAAGAAAAGATAACTTTTACCTGTTTAGAACATTCGCCAACACACCACTGACAATTGATAGTTTGATAAAAATAAGCTATCCGGTCTCCCTCTGCTCAAAATTCTGATACAGTTATTTTCCCCTTGCCTTTCCCTTCCCATTAAAACAGCTGAGATTTATGAAGCCTGAGGCCAGCCTACTGCCTTAACCTGAAGACCAGATGAACCAGGGTTTGACATATTCATGGCCCACCTTGATGCTACCTTTAGATGGACCATGCCTGAAGATCTTGTTGCTCTTAATTTTAACTCATCCACATACCAAGATGACCTTGCATAAGATCTTGAGCTCCTAATAACCTACTAGCCGAAATGCCTTGGTTTTTTGTTGTTTTTCCTTCTCAAAGATTGAACTATGAAACCGTGTTGACTTCCAGATTGGACAGATGTGGAGTTTTCGTTTTGTGTGGTTTACTGCTATAAGATTTGATTAGAACTCATGATGTGCACTCATTATCTCCTCAAAATTCTGTTTTATTTTTTCCTTTTTACCCTTGAGTGCACCCTATTCTGCATCGCCTCCTAAATGTGCTGGGATTAAATGTCGCACTCTGCTCTCTTGCACCCCCAATGGACATTCATTTTTATGGCGCTAAAACATTCCTACTTTACACTCTAATTTCTGAAAAAGGAAAAGGTTTGGTATCAAGCCTCAGGTTGGAACCTTTAGCGAGCTTAATAAGAAAAACCCTCGATGTTTCGGGTCTTGGCCTTGGGGTGGGTGCACCGGTGCCTTTGGGTTTGTGAGAGTGGGTCATCGGAAATATTGAGTTATAAAAAAAGAAGATGGTTTGAGAAGTAAGAAAACAAAAGGAAAGGGGTCAGTTTGATTTCTTATTCTTTTTGCTATATTCATTAAACACTGAATCTGGAAATACTATTTGCTTAAAGATGAATGCTGTTTTAGTTTATTATCCAGTAAGTGAAGAGACTATATTAAGGCCAGCCAGTGGCATTCTATACTTGACAGGGCAAGCTTGGTCCGCTATAGTTTGAAAATGCATTGGTTTGTTCATTGTTTATAGTGGTCAGGCAAGTTTTTGTAGGACTCATAATGCCTTGCAGTCTTTTTCGTTTCTTATATTATTTTGGATTTACAGTATTTTATCTTCAAAAGGATTTTTTCTGTCAACATAGCTATGAGGTCAAGCCGAAACATCTGTGCCAGGTTACTGGTACTGTTGGTACCTCAAAAAAGTACACCCTTCCTCTGTGCAAGGATATAACATTTTCTGACCCTTGAGATGGCCTGTGCTCTGAGTCTCTGGTCCTTGCATGGAAACTTGGCAGCTGGAAGTAATATTATTAGCTGTTGCTGAATGCAACTGGAGTTTTATACTCATTTTGACCTTGGAGTGTTTTAGAAAATGAATGTTTTAGGTAAACTGCTCGTACAGATTGTTAATGTTTGGAACGAAACTGAGTTCTTCGAGCTGTGAAGAGCTGTCTTCAAATCAAATGTGGCCTGACGACCCACAAACAATTCGAAGGTTAGTTTGGAGCTGATGGCAAGAATAGAGCAGGCTTGGACGAGAAGATTGAATTGATAGTTGAGGTAAATGGGGGAATGTTTTGTATTTTTCTTTTTAAATTTTATACAACTCTCGTAATGCTATTCTTTAAATCCATTTTAATGTACAAAATTGTGTGGCAGTTTGTGATGTGTATATGGCCGTGAAATCTATGTTTTTAAAAGGGAAGAAAATAAGTTAGCTCACCCTACAACAGTTGGACGTTATATTTTTATTTTCTCTGTGGTTGCAGCCTAATAATGTATAAAAATAAAAGCCTCTAGAATTCAAAACTTAAATCTACCTGTATCAAAGCAAGTGCTCCTACTCCCACTTGGGCATTTCAAAAAGCCCTAGTTGGATAACTCAGTTGGGTTTGTTGGCTGTTTTTTACGTTCTTATAAACTTTGAACGTGCTGGTCTTTTTATATGCATTTTTTTTTTTAATTATTATATGCATTTGTTTGAATTGTTCGTTCATTTTATTGTAGTTTATTTTTC

Coding sequence (CDS)

ATGGCTGGTCAGAGGAATAGTTACGGAAAGCGTAATCGTTCTCAGTCTGATTATTCTGAAAATGGAGGGAACAAAAGAAGAAGTCACGGTGAGGACCGGGACCAGTTTATTATAGATCCAGAAGATACTGTTTACCGGTATTTGTGCCCTGTTAAAAAGATTGGAAGTGTTATTGGAAGGGGAGGTGAGATAGTGAAGCAGTTAAGGATAGATACTAAATCAAAGATTAGAATTGGAGAAACAGTGCCTGGATCTGATGAGCGTGTCATAACAATCTACAGCGCAAGCAATGAGGCTAATGCTTTGGAAGACAGTAGTGATTATAGTTCTCCAGCTCAGCAGGCTTTGTTCAAAGTCCACCATAGAGTTGTGGCCGATGACCTAATGGGCGAGGAATCTGAAGGAGGAAGTCACCAGGTTACAGCTAGACTTCTTGTACCCTCTGATCAAATTGGTTGTATTATTGGGAAAGGTGGGCAGATTGTCCAGAATATTCGCACTGAGACTGGGGCCCTGATTCGCATTCTTAAGGATGATCATTTACCCCGTTGTGCTCTGAGTTCTGATGAACTTGTGCAGCATCTTAATTTAGTTGTGTTTCAGATATCTGGTGAACCCCCGATTGTGGAGAAAGCCTTATACCAGATTGCATCTAGACTGCATGAAAATCCTTCACGATCTCAGCATCTACTTGCTTCTGCCATACCTGGTGTATATCCTTCTGGTGGTTCGCTTGTGGCTTCTACACATGGTGCTCCAATTATGGGTTTAGCTCCTTTGGTCAGTCCATATGGAGGTTATAAAGGGGACAGTGGTAATTGGTCCAGGTCTTTATATTCAGCTCCAAGGGAAGAATTATCTTCAAAAGAATTTTCTCTTCGATTGATATGTCCAACCGAAAACATTGGAGGTGTCATTGGCAAAGGTGGAGCTGTAATCAATCAGATTAGACAGGAGACTAAGGCTGCCATAAAAGTTGATAGTTCAGCTACTGAAGAAGATGATTGTTTGATAAATATATCATCAAAGGAGTTCTTTGAAGATTCATATTCTCCCACGCTGGAAGCTGCATTGCGCTTGCAACCAAGGTGCAGTGAGAAAGTAGAAAGAGATTCTGGAATTATTTCATTCACAACCCGTCTGCTTGTGCCTACCACACGAATTGGTTGCCTAATTGGTAAAGGTGGAGCTATCATTACCGAGTTGAGAAGGCTCACCAAAGCTAATATTCGAATACTGTCAAAGGAAAACCTCCCCAAGGTTGCCTTGGAAGATGATGAAATGGTGCAGATATCCGGGGATCTTGATGTTGCCAAGGAGGCTCTTGTTCATATAGTGACCAGGTTGAGAGCCAACCTTTTTGATAGAGAAGGTGCTCTGTCAGCTGTTCTGCCTGTTCTGCCGTATCTTCCTCTATCAGCTGATGGTTCAGAAAGTCTATATGATGGTAGAGAAGGCAAAAGACATGGGCGTGGGCATTCTTATTCTAGTAGTTATGGGGGTTTCACGGATTTGGCTGCTGGTGATGGTTATGGAAGTTACAGTGGCTCACAGATTGGTGGTGGTGGTAGTGCTTATGGGGCCTATGGAAGCTTTTCCATGGGACGAAGTGGTAGTTCAGGGGTTTCTGGACAAGGCAATGTTTCTCGGAGGAGAAACTATTCCTAG

Protein sequence

MAGQRNSYGKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGRGGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANALEDSSDYSSPAQQALFKVHHRVVADDLMGEESEGGSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDHLPRCALSSDELVQHLNLVVFQISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPGVYPSGGSLVASTHGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTENIGGVIGKGGAVINQIRQETKAAIKVDSSATEEDDCLINISSKEFFEDSYSPTLEAALRLQPRCSEKVERDSGIISFTTRLLVPTTRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEMVQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSESLYDGREGKRHGRGHSYSSSYGGFTDLAAGDGYGSYSGSQIGGGGSAYGAYGSFSMGRSGSSGVSGQGNVSRRRNYS

Homology

[Close]

BLAST of Carg02242 vs. NCBI nr
Match: XP_022938745.1 (KH domain-containing protein HEN4-like [Cucurbita moschata] >XP_022938747.1 KH domain-containing protein HEN4-like [Cucurbita moschata] >XP_022938748.1 KH domain-containing protein HEN4-like [Cucurbita moschata])

HSP 1 Score: 976.9 bits (2524), Expect = 2.9e-281
Identity = 533/555 (96.04%), Postives = 535/555 (96.40%), Query Frame = 0


Query: 1   MAGQRNSYGKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGR 60
           MAGQRNSY KRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGR
Sbjct: 1   MAGQRNSYAKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGR 60

Query: 61  GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANALEDSSDYSSPAQQALFKVH 120
           GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANALE+SSDYSSPAQQALFKVH
Sbjct: 61  GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANALEESSDYSSPAQQALFKVH 120

Query: 121 HRVVADDLMGEESEGGSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDH 180
           HRVVADDLMGEESEGGSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDH
Sbjct: 121 HRVVADDLMGEESEGGSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDH 180

Query: 181 LPRCALSSDELVQHLNLVVFQISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPGVYP 240
           LPRCALSSDELV        QISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPGVYP
Sbjct: 181 LPRCALSSDELV--------QISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPGVYP 240

Query: 241 SGGSLVASTHGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTE 300
           SGGSLVASTHGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTE
Sbjct: 241 SGGSLVASTHGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTE 300

Query: 301 NIGGVIGKGGAVINQIRQETKAAIKVDSSATEEDDCLINISSKEFFEDSYSPTLEAALRL 360
           NIGGVIGKGGAVINQIRQETKAAIKVDSSATEEDDCLINISSKEFFEDSYSPTLEAALRL
Sbjct: 301 NIGGVIGKGGAVINQIRQETKAAIKVDSSATEEDDCLINISSKEFFEDSYSPTLEAALRL 360

Query: 361 QPRCSEKVERDSGIISFTTRLLVPTTRIGCLIGKGGAIITELRRLTKANIRILSKENLPK 420
           QPRCSEKVERDSGIISFTTRLLVPT+RIGCLIGKGGAIITELRRLTKANIRILSKENLPK
Sbjct: 361 QPRCSEKVERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPK 420

Query: 421 VALEDDEMVQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSESL 480
           VALEDDEMVQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSESL
Sbjct: 421 VALEDDEMVQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSESL 480

Query: 481 YDGREGKRHGRGHSYSSSYGGFTDLAAGDGYGSYSXXXXXXXXXXXXXXXXXXXXXXXXX 540
           YDGREGKRHGRGHSYSSSYGGFTDLAAGDGYGSYS      XXXXXXXXXXXXXXXXXXX
Sbjct: 481 YDGREGKRHGRGHSYSSSYGGFTDLAAGDGYGSYSGSQIGGXXXXXXXXXXXXXXXXXXX 540

Query: 541 XXXGQGNVSRRRNYS 556
           XXX     SRRRNYS
Sbjct: 541 XXXXXXXXSRRRNYS 547

[Close]

BLAST of Carg02242 vs. NCBI nr
Match: XP_023550244.1 (KH domain-containing protein HEN4-like [Cucurbita pepo subsp. pepo] >XP_023550245.1 KH domain-containing protein HEN4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 974.5 bits (2518), Expect = 1.5e-280
Identity = 538/555 (96.94%), Postives = 540/555 (97.30%), Query Frame = 0


Query: 1   MAGQRNSYGKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGR 60
           MAGQRNSYGKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGR
Sbjct: 1   MAGQRNSYGKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGR 60

Query: 61  GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANALEDSSDYSSPAQQALFKVH 120
           GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANALE+SSDYSSPAQQALFKVH
Sbjct: 61  GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANALEESSDYSSPAQQALFKVH 120

Query: 121 HRVVADDLMGEESEGGSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDH 180
           HRVVADDLMGEESE GSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDH
Sbjct: 121 HRVVADDLMGEESEVGSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDH 180

Query: 181 LPRCALSSDELVQHLNLVVFQISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPGVYP 240
           LPRCALSSDELV        QISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPGVYP
Sbjct: 181 LPRCALSSDELV--------QISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPGVYP 240

Query: 241 SGGSLVASTHGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTE 300
           SGGSLVASTHGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTE
Sbjct: 241 SGGSLVASTHGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTE 300

Query: 301 NIGGVIGKGGAVINQIRQETKAAIKVDSSATEEDDCLINISSKEFFEDSYSPTLEAALRL 360
           NIGGVIGKGGAVINQIRQETKAAIKVDSSAT EDDCLINISSKEFFEDSYSPTLEAALRL
Sbjct: 301 NIGGVIGKGGAVINQIRQETKAAIKVDSSAT-EDDCLINISSKEFFEDSYSPTLEAALRL 360

Query: 361 QPRCSEKVERDSGIISFTTRLLVPTTRIGCLIGKGGAIITELRRLTKANIRILSKENLPK 420
           QPRCSEKVERDSGIISFTTRLLVPT+RIGCLIGKGGAIITELRRLTKANIRILSKENLPK
Sbjct: 361 QPRCSEKVERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPK 420

Query: 421 VALEDDEMVQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSESL 480
           VALEDDEMVQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSESL
Sbjct: 421 VALEDDEMVQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSESL 480

Query: 481 YDGREGKRHGRGHSYSSSYGGFTDLAAGDGYGSYSXXXXXXXXXXXXXXXXXXXXXXXXX 540
           YDGREGKRHGRGHSYSSSYGGFTDLAAGDGYGS  XXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 481 YDGREGKRHGRGHSYSSSYGGFTDLAAGDGYGSXXXXXXXXXXXXXXXXXXXXXXXXXXX 540

Query: 541 XXXGQGNVSRRRNYS 556
           X  G GNVSRRRNYS
Sbjct: 541 XVSGHGNVSRRRNYS 546

[Close]

BLAST of Carg02242 vs. NCBI nr
Match: XP_022993579.1 (KH domain-containing protein HEN4-like [Cucurbita maxima] >XP_022993580.1 KH domain-containing protein HEN4-like [Cucurbita maxima] >XP_022993581.1 KH domain-containing protein HEN4-like [Cucurbita maxima])

HSP 1 Score: 961.8 bits (2485), Expect = 9.8e-277
Identity = 530/553 (95.84%), Postives = 534/553 (96.56%), Query Frame = 0


Query: 1   MAGQRNSYGKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGR 60
           MAGQRNSYGKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGR
Sbjct: 1   MAGQRNSYGKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGR 60

Query: 61  GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANALEDSSDYSSPAQQALFKVH 120
           GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNE NALE+SSDYSSPAQQALFKVH
Sbjct: 61  GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNETNALEESSDYSSPAQQALFKVH 120

Query: 121 HRVVADDLMGEESEGGSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDH 180
           HRVVADDLM EESEG SHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDH
Sbjct: 121 HRVVADDLMDEESEGVSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDH 180

Query: 181 LPRCALSSDELVQHLNLVVFQISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPGVYP 240
           LPRCALSSDELV        QISGEPPIVEKALYQIASRL ENPSRSQHLLASAIPGVYP
Sbjct: 181 LPRCALSSDELV--------QISGEPPIVEKALYQIASRLQENPSRSQHLLASAIPGVYP 240

Query: 241 SGGSLVASTHGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTE 300
           SGGSLVASTHGAPIMGLA LVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTE
Sbjct: 241 SGGSLVASTHGAPIMGLASLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTE 300

Query: 301 NIGGVIGKGGAVINQIRQETKAAIKVDSSATEEDDCLINISSKEFFEDSYSPTLEAALRL 360
           NIGGVIGKGGAVINQIRQETKAAIKVDSSATEEDDCLINI+SKEFFEDSYSPTLEAALRL
Sbjct: 301 NIGGVIGKGGAVINQIRQETKAAIKVDSSATEEDDCLINITSKEFFEDSYSPTLEAALRL 360

Query: 361 QPRCSEKVERDSGIISFTTRLLVPTTRIGCLIGKGGAIITELRRLTKANIRILSKENLPK 420
           QPRCSEKVERDSGIISFTTRLLVPT+RIGCLIGKGGAIITELRRLTKANIRILSKENLPK
Sbjct: 361 QPRCSEKVERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPK 420

Query: 421 VALEDDEMVQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSESL 480
           VALEDDEMVQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPL ADGSESL
Sbjct: 421 VALEDDEMVQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLPADGSESL 480

Query: 481 YDGREGKRHGRGHSYSSSYGGFTDLAAGDGYGSYSXXXXXXXXXXXXXXXXXXXXXXXXX 540
           YDGREGKRHGRGHSYS+SYGGFTDLAAGDGYGS  XXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 481 YDGREGKRHGRGHSYSNSYGGFTDLAAGDGYGSXXXXXXXXXXXXXXXXXXXXXXXXXXX 540

Query: 541 XXXGQGNVSRRRN 554
           X  G GNVSRRRN
Sbjct: 541 XVSGHGNVSRRRN 545

[Close]

BLAST of Carg02242 vs. NCBI nr
Match: XP_022133717.1 (KH domain-containing protein HEN4 [Momordica charantia])

HSP 1 Score: 909.4 bits (2349), Expect = 5.8e-261
Identity = 504/557 (90.48%), Postives = 522/557 (93.72%), Query Frame = 0


Query: 1   MAGQRNSYGKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGR 60
           MAGQRNSYGKRN SQSDY+ENGGNKRR+HGEDRDQF+IDPEDTVYRYLCPVKKIGSVIGR
Sbjct: 1   MAGQRNSYGKRNHSQSDYAENGGNKRRTHGEDRDQFVIDPEDTVYRYLCPVKKIGSVIGR 60

Query: 61  GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANALEDSSDYSSPAQQALFKVH 120
           GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNE N+LE+S DY  PAQ+ALFK+H
Sbjct: 61  GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEINSLEESDDYVCPAQEALFKIH 120

Query: 121 HRVVADDLMGEESEGGSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDH 180
            RVVADDL  EES+GG HQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGA IRILKDDH
Sbjct: 121 DRVVADDLNDEESDGGGHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGAQIRILKDDH 180

Query: 181 LPRCALSSDELVQHLNLVVFQISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPGVYP 240
           LPRCALSSDELV        QISGE  IV KALY+IASRLH+NPSRSQHLLASA+P VY 
Sbjct: 181 LPRCALSSDELV--------QISGEALIVRKALYRIASRLHDNPSRSQHLLASAMPNVYS 240

Query: 241 SGGSLVASTHGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREEL-SSKEFSLRLICPT 300
           SGGSLV  THG PIMGLAPLV PYGGYKGDSGNWSRSLYSAPREEL SSKEFSLRLICPT
Sbjct: 241 SGGSLVTPTHGGPIMGLAPLVGPYGGYKGDSGNWSRSLYSAPREELSSSKEFSLRLICPT 300

Query: 301 ENIGGVIGKGGAVINQIRQETKAAIKVDSSATEEDDCLINISSKEFFEDSYSPTLEAALR 360
           ENIGGVIGKGGA+INQIRQETKAAIKVDSSATE DDCLINISSKEFFEDSYSPTLEAALR
Sbjct: 301 ENIGGVIGKGGAIINQIRQETKAAIKVDSSATEGDDCLINISSKEFFEDSYSPTLEAALR 360

Query: 361 LQPRCSEKVERDSGIISFTTRLLVPTTRIGCLIGKGGAIITELRRLTKANIRILSKENLP 420
           LQPRCSEKVERDSGIISFTTRLLVPT+RIGCLIGKGGAIITELRRLTKANIRILSKENLP
Sbjct: 361 LQPRCSEKVERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLP 420

Query: 421 KVALEDDEMVQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSES 480
           KVALEDDEMVQISGDLDVAKEALVH+VTRLRANLFDREGALSA+LPVLPYLPLSADGS+S
Sbjct: 421 KVALEDDEMVQISGDLDVAKEALVHVVTRLRANLFDREGALSAMLPVLPYLPLSADGSDS 480

Query: 481 L-YDGREGKRHGRGHSYSSSYGGFTDLAAGDGYGSYSXXXXXXXXXXXXXXXXXXXXXXX 540
           L YDGR+GKRHGRGHSYSS YGGF DLAAGDGYGS  XXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 481 LSYDGRDGKRHGRGHSYSSGYGGFNDLAAGDGYGSXXXXXXXXXXXXXXXXXXXXXXXXX 540

Query: 541 XXXXXGQGNVSRRRNYS 556
           XXXXXG G+VSRRRNYS
Sbjct: 541 XXXXXGHGSVSRRRNYS 549

[Close]

BLAST of Carg02242 vs. NCBI nr
Match: XP_022958668.1 (KH domain-containing protein HEN4-like [Cucurbita moschata])

HSP 1 Score: 896.3 bits (2315), Expect = 5.1e-257
Identity = 466/517 (90.14%), Postives = 487/517 (94.20%), Query Frame = 0


Query: 1   MAGQRNSYGKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGR 60
           MAGQRNSYGKRN SQSDY+ENGGN+RRSHG+DRDQF+IDPEDTVYRYLCPVKKIGSVIGR
Sbjct: 1   MAGQRNSYGKRNHSQSDYAENGGNRRRSHGDDRDQFVIDPEDTVYRYLCPVKKIGSVIGR 60

Query: 61  GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANALEDSSDYSSPAQQALFKVH 120
           GGEIVKQLRIDTKSKIRIGETVPG DERVITIYS SNE N++ED SDY SPAQ+ALFKVH
Sbjct: 61  GGEIVKQLRIDTKSKIRIGETVPGCDERVITIYSPSNEINSMED-SDYVSPAQEALFKVH 120

Query: 121 HRVVADDLMGEESEGGSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDH 180
            RVVADDL  EESEGG H VTAR+LVPSDQIGCIIGKGGQIVQNIRTETGAL+RILKDDH
Sbjct: 121 DRVVADDLNEEESEGGGHHVTARILVPSDQIGCIIGKGGQIVQNIRTETGALVRILKDDH 180

Query: 181 LPRCALSSDELVQHLNLVVFQISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPGVYP 240
           LPRCAL+SDELV        Q+SGEP IV+KALYQIASRLH+NPSRSQHLLASAIPGVY 
Sbjct: 181 LPRCALNSDELV--------QVSGEPSIVKKALYQIASRLHDNPSRSQHLLASAIPGVYA 240

Query: 241 SGGSLVASTHGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREELSS-KEFSLRLICPT 300
           SGGS++A THGAPIMGLAPLV PYGGYKGDSGNWSRSLYSAPREELSS KEFSLRL+CP+
Sbjct: 241 SGGSILAPTHGAPIMGLAPLVGPYGGYKGDSGNWSRSLYSAPREELSSAKEFSLRLVCPS 300

Query: 301 ENIGGVIGKGGAVINQIRQETKAAIKVDSSATEEDDCLINISSKEFFEDSYSPTLEAALR 360
           ENIGGVIGKGGAVINQIRQETKAAIKVDSS TE DD LINISSKEFFEDSYSPTLEAALR
Sbjct: 301 ENIGGVIGKGGAVINQIRQETKAAIKVDSS-TEGDDSLINISSKEFFEDSYSPTLEAALR 360

Query: 361 LQPRCSEKVERDSGIISFTTRLLVPTTRIGCLIGKGGAIITELRRLTKANIRILSKENLP 420
           LQPRCSEKVERDSGIISFTTRLLVPT+RIGCLIGKGGAIITELRRLTKANIRILSKENLP
Sbjct: 361 LQPRCSEKVERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLP 420

Query: 421 KVALEDDEMVQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSES 480
           KVALEDDEMVQISGDLDVAKEALVHIVTRLRANLFDREGALSA+LPVLPYLPLSADGS+S
Sbjct: 421 KVALEDDEMVQISGDLDVAKEALVHIVTRLRANLFDREGALSAMLPVLPYLPLSADGSDS 480

Query: 481 L-YDGREGKRHGRGHSYSSSYGGFTDLAAGDGYGSYS 516
           L YDGR+ KRHGRGHSYSS YGGFTDLAAGDGYGSYS
Sbjct: 481 LNYDGRDSKRHGRGHSYSSGYGGFTDLAAGDGYGSYS 507

[Close]

BLAST of Carg02242 vs. TAIR10
Match: AT5G15270.2 (RNA-binding KH domain-containing protein)

HSP 1 Score: 601.3 bits (1549), Expect = 6.1e-172
Identity = 309/452 (68.36%), Postives = 373/452 (82.52%), Query Frame = 0


Query: 10  KRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGRGGEIVKQLR 69
           KR+R QSDY +NGG+KRR  G+DRD  +ID +DTV+RYLCPVKKIGSVIGRGG+IVKQLR
Sbjct: 17  KRSRPQSDYDDNGGSKRRYRGDDRDSLVIDRDDTVFRYLCPVKKIGSVIGRGGDIVKQLR 76

Query: 70  IDTKSKIRIGETVPGSDERVITIYSASNEANALEDSSDYSSPAQQALFKVHHRVVADDLM 129
            DT+SKIRIGE +PG DERVITIYS S+E NA  D     SPAQ ALF++H RVVADD  
Sbjct: 77  NDTRSKIRIGEAIPGCDERVITIYSPSDETNAFGDGEKVLSPAQDALFRIHDRVVADDAR 136

Query: 130 GEESEGGSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDHLPRCALSSD 189
            E+S  G  QVTA+LLVPSDQIGCI+G+GGQIVQNIR+ETGA IRI+KD ++P CAL+SD
Sbjct: 137 SEDSPEGEKQVTAKLLVPSDQIGCILGRGGQIVQNIRSETGAQIRIVKDRNMPLCALNSD 196

Query: 190 ELVQHLNLVVFQISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPGVYPSGGSLVAST 249
           EL+        QISGE  IV+KAL QIASRLHENPSRSQ+LL+S+  G YP+ GSL++  
Sbjct: 197 ELI--------QISGEVLIVKKALLQIASRLHENPSRSQNLLSSS--GGYPA-GSLMSHA 256

Query: 250 HGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTENIGGVIGKG 309
            G  ++GLAPL+  YG    D+G+WSR LY  PR +  + EF +RL+ P ENI  VIGKG
Sbjct: 257 GGPRLVGLAPLMGSYG---RDAGDWSRPLYQPPRNDPPATEFFIRLVSPVENIASVIGKG 316

Query: 310 GAVINQIRQETKAAIKVDSSATEEDDCLINISSKEFFEDSYSPTLEAALRLQPRCSEKVE 369
           GA+INQ+RQET+A IKVDSS TE +DCLI IS++E FED+YSPT+EA +RLQP+CS+KVE
Sbjct: 317 GALINQLRQETRATIKVDSSRTEGNDCLITISAREVFEDAYSPTIEAVMRLQPKCSDKVE 376

Query: 370 RDSGIISFTTRLLVPTTRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEMV 429
           RDSG++SFTTRLLVP++RIGC++GKGGAIITE+RR+TKANIRIL KENLPKVA +DDEMV
Sbjct: 377 RDSGLVSFTTRLLVPSSRIGCILGKGGAIITEMRRMTKANIRILGKENLPKVASDDDEMV 436

Query: 430 QISGDLDVAKEALVHIVTRLRANLFDREGALS 462
           QISG+LDVAKEAL+ I +RLRAN+FDREGA+S
Sbjct: 437 QISGELDVAKEALIQITSRLRANVFDREGAVS 454

[Close]

BLAST of Carg02242 vs. TAIR10
Match: AT1G14170.3 (RNA-binding KH domain-containing protein)

HSP 1 Score: 451.4 bits (1160), Expect = 7.8e-127
Identity = 250/489 (51.12%), Postives = 335/489 (68.51%), Query Frame = 0


Query: 5   RNSYGKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGRGGEI 64
           RN +GKR+  QS+++ NGG+KRR+  ++ DQ +I  EDTVYRYLCPVKK GS+IG+GGEI
Sbjct: 6   RNIHGKRSNLQSEFTGNGGSKRRNLHDETDQNVIASEDTVYRYLCPVKKTGSIIGKGGEI 65

Query: 65  VKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANALEDSSDYSSPAQQALFKVHHRVV 124
            KQ+R +TKS +RI E +PG +ERV+T+YS + E N   D  +   PA  ALFKVH  VV
Sbjct: 66  AKQIRSETKSNMRINEALPGCEERVVTMYSTNEELNHFGDDGELVCPALDALFKVHDMVV 125

Query: 125 A----DDLMGEESEGGSHQ-VTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDD 184
           A    DD   ++++ G  Q VT R+LVPSDQIGC+IGKGGQ++QN+R +T A IR++K D
Sbjct: 126 ADADQDDGTDDDNDLGEKQTVTVRMLVPSDQIGCVIGKGGQVIQNLRNDTNAQIRVIK-D 185

Query: 185 HLPRCA--LSSDELVQHLNLVVFQISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPG 244
           HLP CA  LS DEL+         I GEP +V +ALYQ+AS LH+NPSR QHLL S+   
Sbjct: 186 HLPACALTLSHDELL--------LIIGEPLVVREALYQVASLLHDNPSRFQHLLLSSSSS 245

Query: 245 VYPSGGSLVASTHGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLIC 304
                G+++ S         A L S            S   Y+  R+   ++EF +  IC
Sbjct: 246 SMHQPGAMLMS---------AALTS------------SHRNYAVRRDIADAREFCVCFIC 305

Query: 305 PTENIGGVIGKGGAVINQIRQETKAAIKVDSSATEEDDCLINISSKEFFEDSYSPTLEAA 364
           P EN+GGVIGKGG  INQIRQET A I+V++S T++DDC+I ISSKEF+ED  SP + AA
Sbjct: 306 PAENVGGVIGKGGGFINQIRQETGATIRVNTSETDDDDCIIFISSKEFYEDQ-SPAVNAA 365

Query: 365 LRLQPRCSEKVERDSGIISFTTRLLVPTTRIGCLIGKGGAIITELRRLTKANIRILSKEN 424
           +RLQ RCSEKV +D+  ++ +TRLLV +++IGCLIGKGGA+I+E+R +T+ANIRIL KE+
Sbjct: 366 IRLQQRCSEKVGKDANDLAISTRLLVSSSQIGCLIGKGGAVISEMRSVTRANIRILQKED 425

Query: 425 LPKVALEDDEMVQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLP-LSADG 484
           +PK+A ED+EMVQI+G  D A +AL  ++ RLRAN FD +  L  +    PY+P ++   
Sbjct: 426 VPKIAREDEEMVQITGSPDAAMKALTQVILRLRANSFDMDHGLVLLPTSFPYIPQVTESS 463

Query: 485 SESLYDGRE 486
           S+S Y  R+
Sbjct: 486 SKSKYAKRD 463

[Close]

BLAST of Carg02242 vs. TAIR10
Match: AT5G46190.1 (RNA-binding KH domain-containing protein)

HSP 1 Score: 216.5 bits (550), Expect = 4.2e-56
Identity = 158/467 (33.83%), Postives = 248/467 (53.10%), Query Frame = 0


Query: 31  EDRDQFIIDPEDTVYRYLCPVKKIGSVIGRGGEIVKQLRIDTKSKIRIGETVPGSDERVI 90
           +++D  ++     VYR LCP   +GSVIG+ G+++  +R +T+++I++ +  PG  ERVI
Sbjct: 37  DNKDDLVV-----VYRILCPSGVMGSVIGKSGKVINLIRQETRARIKVVDPFPGCSERVI 96

Query: 91  TIYSASNEANALED----SSDYSSP---AQQALFKVHHRVVADDLMGEESEGGSHQ--VT 150
           TI+ + +E   + D      DYS P   AQ AL KVH  +VA      E+          
Sbjct: 97  TIFCSVSEKKDIVDIEYSELDYSVPLCSAQAALLKVHDAIVASLATAAENTKIDRDDFRE 156

Query: 151 ARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILK---DDHLPRCALSSDELVQHLNLV 210
            RLLVPS Q   +IGK G I++NIR  T A ++++     D    CA+  D +V      
Sbjct: 157 CRLLVPSSQCSIVIGKSGSIIKNIRGRTRANVKVVSKDVSDPSHTCAMDFDNIV------ 216

Query: 211 VFQISGEPPIVEKALYQIASRLHENPSRSQHLLASAI------------------PGVYP 270
              ISGE   V+KAL+ +++ +++   R Q  L + +                   G+YP
Sbjct: 217 --MISGETESVKKALFAVSAIMYKVSPREQIPLDTTVQEVPASIIIPSDLSIYPQAGLYP 276

Query: 271 SGGSLVASTHGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREEL--------SSKEFS 330
           S  S+    HGA +      +    GY  ++ N    ++SA    +         S++ +
Sbjct: 277 SQDSIF--QHGANVSSFIGTLPQ--GYGENAAN-PVPVFSASALPVVHGFGGSSRSEKLA 336

Query: 331 LRLICPTENIGGVIGKGGAVINQIRQETKAAIKV-DSSATEEDDCLINISSKEFFEDSYS 390
           +++IC +  IG VIGKGG  I  IRQ + + I+V DS    +DDC+I +++ E  +D  S
Sbjct: 337 IKVICSSSKIGRVIGKGGLTIKGIRQASGSHIEVNDSRTNHDDDCVITVTATESPDDLKS 396

Query: 391 PTLEAALRLQPRCSEKVERDSGIISFTTRLLVPTTRIGCLIGKGGAIITELRRLTKANIR 450
             +EA L LQ + +++ E          +LLV +  IGC+IGK G+II+E+R+ TKA+I 
Sbjct: 397 MAVEAVLLLQEKINDEDED-----KVKMQLLVSSKVIGCIIGKSGSIISEIRKRTKADIH 456

Query: 451 ILSKENLPKVALEDDEMVQISGDLDVAKEALVHIVTRLRAN-LFDRE 458
           I    N PK A  +DE+V+ISG++   ++AL+ IV RLR + L DRE
Sbjct: 457 ISKGNNTPKCADPNDELVEISGEVSNVRDALIQIVLRLRDDVLRDRE 480

[Close]

BLAST of Carg02242 vs. TAIR10
Match: AT5G53060.1 (RNA-binding KH domain-containing protein)

HSP 1 Score: 202.2 bits (513), Expect = 8.3e-52
Identity = 143/435 (32.87%), Postives = 228/435 (52.41%), Query Frame = 0


Query: 43  TVYRYLCPVKKIGSVIGRGGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANAL 102
           T YR LC   K G VIG+ G I+K +R  T + I + E VPG  ER+I I  + N     
Sbjct: 68  TTYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDAERIIEI--SDNRRRDP 127

Query: 103 EDSSDYSSPAQQALFKVHHRVVADDLM-------------GEESEGGSHQVTARLLVPSD 162
           +      SPAQ+ALF VH R++  +                        +V  RL+V   
Sbjct: 128 DGRMPSFSPAQEALFSVHDRILESEAQFGYGXXXXXXXXXXXXXXXXXXRVVTRLVVSRM 187

Query: 163 QIGCIIGKGGQIVQNIRTETGALIRIL-KDDHLPRCALSSDELVQHLNLVVFQISGEPPI 222
            +GC++GKGG+I++ +R ET   IRIL ++ +LPRC   S+E+V        QI GE   
Sbjct: 188 HVGCLLGKGGKIIEQMRIETKTHIRILPRESNLPRCVSLSEEIV--------QIVGELNA 247

Query: 223 VEKALYQIASRLHENPSRSQHLLASAIPGVYPSGGSLVASTHGAPIMGLAPLVS---PYG 282
           V+ AL  ++SRL E    SQH   S   G   S     A+     +  L    S   P G
Sbjct: 248 VKNALAIVSSRLRE----SQHRDRSNFQGRSHSPERSFAAAGDDYMPQLRRQSSDRFPRG 307

Query: 283 GYKGDSGNWSRSLYS--APR----EELSSKEFSLRLICPTENIGGVIGKGGAVINQIRQE 342
            ++ ++ +  +S Y+  AP     E + S+E   +++CP + I  V+G+   +I+ ++ E
Sbjct: 308 NFRNNNFSSRQSNYAEEAPAVPVGENVYSEELVFQILCPADKIVRVVGESQGIIDLLQNE 367

Query: 343 TKAAIKVDSSATEEDDCLINISSKEFFEDSYSPTLEAALRLQPRCSEKVERDSGIISFTT 402
               ++V       D+ +I ISS+E  +D + P  EA L +Q +  + +     +I  TT
Sbjct: 368 IGVDVRVSDPVAGSDEQIITISSEEAPDDPFFPAQEALLHIQTQIIDLIPDKDNLI--TT 427

Query: 403 RLLVPTTRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEMVQISGDLDVAK 455
           RLLVP+    CL GK G+ ++E+ RLT  +++IL++E +P+ A  +D ++QI+G++  A+
Sbjct: 428 RLLVPSRDSICLEGKAGS-VSEISRLTGTSVQILAREEIPRCASINDVVIQITGEIRAAR 485

[Close]

BLAST of Carg02242 vs. TAIR10
Match: AT1G51580.1 (RNA-binding KH domain-containing protein)

HSP 1 Score: 195.7 bits (496), Expect = 7.7e-50
Identity = 136/452 (30.09%), Postives = 225/452 (49.78%), Query Frame = 0


Query: 41  EDTVYRYLCPVKKIGSVIGRGGEIVKQLRIDTKSKIRIGETVP-GSDERVITIYSAS--- 100
           E   +R LCP  + G++IG+GG +++ L+  T SKIR+ + +P  S+ERV+ I + S   
Sbjct: 17  ESVHFRLLCPATRTGAIIGKGGSVIRHLQSVTGSKIRVIDDIPVPSEERVVLIIAPSGKK 76

Query: 101 -NEANALE-----------------------DSSDYSSPAQQALFKVHHRVVADD----L 160
            +E+N  +                       D  +  S AQ AL +V  R+V  D    +
Sbjct: 77  KDESNVCDSENPGSEEPKQEKGSECAGTSGGDDEEAPSSAQMALLRVFERIVFGDDAATV 136

Query: 161 MGEESEGGSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDHLPRCALSS 220
            G+E + G  +   R++V  +Q+  ++ KGG+++Q IR ++GA++RI   D +P CA   
Sbjct: 137 DGDELDKGESEGLCRMIVRGNQVDYLMSKGGKMIQKIREDSGAIVRISSTDQIPPCAFPG 196

Query: 221 DELVQHLNLVVFQISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPGVYPSGGSLVAS 280
           D        VV Q++G+   V+KAL  + + L E+             G  P+       
Sbjct: 197 D--------VVIQMNGKFSSVKKALLLVTNCLQES-------------GAPPTWDECPFP 256

Query: 281 THGAP------IMGLAPLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTENI 340
             G P               P      D G ++R +          +E + RL+CP + +
Sbjct: 257 QPGYPPEYHXXXXXXXXXXXPPNPMPEDVGPFNRPVV--------EEEVAFRLLCPADKV 316

Query: 341 GGVIGKGGAVINQIRQETKAAIKVDSSATEEDDCLINISSKEFFEDSYSPTLEAALRLQP 400
           G +IGKGGAV+  ++ E+ A+IKV     + ++ +I IS++E  E  +S   +  +R+  
Sbjct: 317 GSLIGKGGAVVRALQNESGASIKVSDPTHDSEERIIVISARENLERRHSLAQDGVMRVHN 376

Query: 401 RCSEKVERDSGIISFTTRLLVPTTRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVA 455
           R  E     S  +    RLLV +  IG L+GKGG +I+E+RR T A+IR+ +K+   K  
Sbjct: 377 RIVEIGFEPSAAV--VARLLVHSPYIGRLLGKGGHLISEMRRATGASIRVFAKDQATKYE 436

[Close]

BLAST of Carg02242 vs. Swiss-Prot
Match: sp|Q8W4B1|RCF3_ARATH (RNA-binding KH domain-containing protein RCF3 OS=Arabidopsis thaliana OX=3702 GN=RCF3 PE=1 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.5e-50
Identity = 143/435 (32.87%), Postives = 228/435 (52.41%), Query Frame = 0


Query: 43  TVYRYLCPVKKIGSVIGRGGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANAL 102
           T YR LC   K G VIG+ G I+K +R  T + I + E VPG  ER+I I  + N     
Sbjct: 68  TTYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDAERIIEI--SDNRRRDP 127

Query: 103 EDSSDYSSPAQQALFKVHHRVVADDLM-------------GEESEGGSHQVTARLLVPSD 162
           +      SPAQ+ALF VH R++  +                        +V  RL+V   
Sbjct: 128 DGRMPSFSPAQEALFSVHDRILESEAQFGYGXXXXXXXXXXXXXXXXXXRVVTRLVVSRM 187

Query: 163 QIGCIIGKGGQIVQNIRTETGALIRIL-KDDHLPRCALSSDELVQHLNLVVFQISGEPPI 222
            +GC++GKGG+I++ +R ET   IRIL ++ +LPRC   S+E+V        QI GE   
Sbjct: 188 HVGCLLGKGGKIIEQMRIETKTHIRILPRESNLPRCVSLSEEIV--------QIVGELNA 247

Query: 223 VEKALYQIASRLHENPSRSQHLLASAIPGVYPSGGSLVASTHGAPIMGLAPLVS---PYG 282
           V+ AL  ++SRL E    SQH   S   G   S     A+     +  L    S   P G
Sbjct: 248 VKNALAIVSSRLRE----SQHRDRSNFQGRSHSPERSFAAAGDDYMPQLRRQSSDRFPRG 307

Query: 283 GYKGDSGNWSRSLYS--APR----EELSSKEFSLRLICPTENIGGVIGKGGAVINQIRQE 342
            ++ ++ +  +S Y+  AP     E + S+E   +++CP + I  V+G+   +I+ ++ E
Sbjct: 308 NFRNNNFSSRQSNYAEEAPAVPVGENVYSEELVFQILCPADKIVRVVGESQGIIDLLQNE 367

Query: 343 TKAAIKVDSSATEEDDCLINISSKEFFEDSYSPTLEAALRLQPRCSEKVERDSGIISFTT 402
               ++V       D+ +I ISS+E  +D + P  EA L +Q +  + +     +I  TT
Sbjct: 368 IGVDVRVSDPVAGSDEQIITISSEEAPDDPFFPAQEALLHIQTQIIDLIPDKDNLI--TT 427

Query: 403 RLLVPTTRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEMVQISGDLDVAK 455
           RLLVP+    CL GK G+ ++E+ RLT  +++IL++E +P+ A  +D ++QI+G++  A+
Sbjct: 428 RLLVPSRDSICLEGKAGS-VSEISRLTGTSVQILAREEIPRCASINDVVIQITGEIRAAR 485

[Close]

BLAST of Carg02242 vs. Swiss-Prot
Match: sp|P58223|Y4837_ARATH (KH domain-containing protein At4g18375 OS=Arabidopsis thaliana OX=3702 GN=At4g18375 PE=2 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 7.6e-47
Identity = 165/548 (30.11%), Postives = 270/548 (49.27%), Query Frame = 0


Query: 10  KRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGRGGEIVKQLR 69
           KR + Q + SE+  N++R    D+   I   E  VYR LCP+  +G VIG+ G+++  +R
Sbjct: 6   KRKQIQRNNSESNRNQKRRISHDK---INRDELVVYRILCPIDVVGGVIGKSGKVINAIR 65

Query: 70  IDTKSKIRIGETVPGSDERVITIYSA----SNEANALEDSSDYSSPAQQALFKVHHRVVA 129
            +TK+KI++ + + G  +RVITIY +      E    +  ++    AQ AL KV+  +VA
Sbjct: 66  HNTKAKIKVFDQLHGCSQRVITIYCSVKEKQEEIGFTKSENEPLCCAQDALLKVYDAIVA 125

Query: 130 DDLMGEESEGGSH-----QVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDD- 189
            D   EE+   ++         RLLVP  Q   +IGK G+ ++ IR  T A ++++  D 
Sbjct: 126 SD---EENNTKTNVDRDDNKECRLLVPFSQSSSLIGKAGENIKRIRRRTRASVKVVSKDV 185

Query: 190 ----HLPRCALSSDELVQHLNLVVFQISGEPPIVEKALYQIASRLHE-NP-------SRS 249
               H+  CA+  D      N+VV  ISGEP  V++AL+ +++ +++ NP       S S
Sbjct: 186 SDPSHV--CAMEYD------NVVV--ISGEPESVKQALFAVSAIMYKINPRENIPLDSTS 245

Query: 250 QHLLASAI-------PGVYPSGGSLVASTH------GAPIMGLAPLVSPYGGYKGDSGN- 309
           Q + A+++         VYP  G      H      G P    A  VS + GY   + N 
Sbjct: 246 QDVPAASVIVPSDLSNSVYPQTGFYSNQDHILQQGAGVPSYFNALSVSDFQGYAETAANP 305

Query: 310 -----WSRSLYSAPREELSSKEFSLRLICPTENIGGVIGKGGAVINQIRQETKAAIKVDS 369
                 S  +         S+E   +++CP  NI  VIGKGG+ I +IR+ + + I+V+ 
Sbjct: 306 VPVFASSLPVTHGFGGSSRSEELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVND 365

Query: 370 SATE--EDDCLINISSKEFFEDSYSPTLEAALRLQPRCSEKVERDSGIISFTTRLLVPTT 429
           S T+  +D+C+I +++ E  +D  S  +EA L LQ     +   D    +   +LLV + 
Sbjct: 366 SRTKCGDDECVIIVTATESPDDMKSMAVEAVLLLQ-----EYINDEDAENVKMQLLVSSK 425

Query: 430 RIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEMVQISGDLDVAKEALVHIV 489
            IGC+IGK G++I E+R+ T ANI I   +         D++V++SG++   ++AL+ IV
Sbjct: 426 VIGCVIGKSGSVINEIRKRTNANICISKGKK--------DDLVEVSGEVSSVRDALIQIV 485

Query: 490 TRLRANLFDREGALSAVLPVLPYLPLSADGSESLYDGREGKRHGRGHSYSSSYGGFTDLA 515
            RLR ++   + +++   P     P   D    L           G++  S        +
Sbjct: 486 LRLREDVLGDKDSVATRKP-----PARTDNCSFLSGSSNA-----GYTLPSFMSSMASTS 514

[Close]

BLAST of Carg02242 vs. Swiss-Prot
Match: sp|F4KDN0|HEN4_ARATH (KH domain-containing protein HEN4 OS=Arabidopsis thaliana OX=3702 GN=HEN4 PE=1 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 1.5e-31
Identity = 151/625 (24.16%), Postives = 228/625 (36.48%), Query Frame = 0


Query: 10  KRNRSQSDYSENGGNKR--RSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGRGGEIVKQ 69
           KR+ +    S  G +KR    H +     ++      +R LCP+  +G+VIG+ G ++KQ
Sbjct: 12  KRSGAFDPGSGFGSSKRVKTHHTQLLSALVVPVGHAAFRLLCPLSHVGAVIGKSGNVIKQ 71

Query: 70  LRIDTKSKIRIGETVPGSDERVITIYSAS--------------NEANALEDSSDYSSPAQ 129
           L+  T +KIR+ E   GS +RVITI + +                             AQ
Sbjct: 72  LQQSTGAKIRVEEPPSGSPDRVITIIAQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQ 131

Query: 130 QALFKVHHRVVADDLMGEESEGGSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALI 189
            AL KV   + A        E  S  V  RLL  S   G +IGKGGQ+V +IR ETG  I
Sbjct: 132 GALIKVFELLAA--------EADSDTVVCRLLTESSHAGAVIGKGGQMVGSIRKETGCKI 191

Query: 190 RILKDDHLPRCALSSDELVQHLNLVVFQISGEPPIVEKALYQIAS--------------- 249
            I + ++LP CA + DE+V        ++ G    V+KAL  I+                
Sbjct: 192 SI-RIENLPICADTDDEMV--------EVEGNAIAVKKALVSISRCLQNCQSIDKVRMVG 251

Query: 250 ------------------------------------------------------------ 309
                                                                       
Sbjct: 252 NRPLEKEFQASLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 311

Query: 310 ------------------------------------------------------------ 369
                                                                       
Sbjct: 312 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGDC 371

Query: 370 -RLHENPSRSQHLLASAIPGVYPSGGSLVASTHGAPIMGLAPLVSPYGGYKGDSGNWSRS 429
            R H     S   L      V                             +G S ++   
Sbjct: 372 FRQHRERDDSHDSLHRPFEMVPXXXXXXXXXXXXXXXXXXXXXXXXXXTLRGQSADYLAH 431

Query: 430 LYSA-----------------------PRE-ELSSKEFSLRLICPTENIGGVIGKGGAVI 455
            YS                        P E E+ +++   +++C TEN GGVIG GG V+
Sbjct: 432 RYSTLDTHPHSFTTSASMANTATMKPPPSEVEVGNQDVVFKILCSTENAGGVIGTGGKVV 491

[Close]

BLAST of Carg02242 vs. Swiss-Prot
Match: sp|Q9SR13|FLK_ARATH (Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 1.2e-18
Identity = 55/171 (32.16%), Postives = 93/171 (54.39%), Query Frame = 0


Query: 290 EFSLRLICPTENIGGVIGKGGAVINQIRQETKAAIKVDSSATEEDDCLINISSKEFFEDS 349
           E   R++ P + +G +IG+ G VI +I +ET+A IK+        +  + +S KE  E S
Sbjct: 186 ETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPESS 245

Query: 350 YSPTLEAALRLQPRCSEKVERDSGII----SFTTRLLVPTTRIGCLIGKGGAIITELRRL 409
             P+++  LR+  R  + ++ ++         +TRLLVP ++ G LIGK G  +  ++  
Sbjct: 246 LPPSMDGLLRVHMRIVDGLDGEASQAPPPSKVSTRLLVPASQAGSLIGKQGGTVKAIQEA 305

Query: 410 TKANIRILSKENLPKVALEDDEMVQISGDLDVAKEALVHIVTRLRANLFDR 457
           +   +R+L  E+LP  AL+DD +V++ G+      AL  I + LR  L DR
Sbjct: 306 SACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHLRKFLVDR 356

[Close]

BLAST of Carg02242 vs. Swiss-Prot
Match: sp|Q9SZH4|PEP_ARATH (RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana OX=3702 GN=PEP PE=1 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 2.4e-16
Identity = 59/168 (35.12%), Postives = 91/168 (54.17%), Query Frame = 0


Query: 294 RLICPTENIGGVIGKGGAVINQIRQETKAAIKVDSSATEEDDCLINISSKEFFEDSYSPT 353
           R+I P   +G +IG+ G  I ++ +ET+A IKV        D ++ IS KE  E   SP 
Sbjct: 77  RMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRIVLISGKEEPEAYMSPA 136

Query: 354 LEAALRLQPRCSEKVERD------SGIISFTTRLLVPTTRIGCLIGKGGAIITELRRLTK 413
           ++A LR+  R S   + D      +G +  + RLLV +T+   LIGK G++I  +   + 
Sbjct: 137 MDAVLRVFRRVSGLPDNDDDDVQNAGSVFSSVRLLVASTQAINLIGKQGSLIKSIVENSG 196

Query: 414 ANIRILSKENLPKVALEDDEMVQISGDLDVAKEALVHIVTRLRANLFD 456
           A++RILS+E  P  A +D+ +V + G+     +AL  IV  LR  L D
Sbjct: 197 ASVRILSEEETPFYAAQDERIVDLQGEALKILKALEAIVGHLRRFLVD 244

[Close]

BLAST of Carg02242 vs. TrEMBL
Match: tr|A0A1S3C9E7|A0A1S3C9E7_CUCME (KH domain-containing protein At4g18375 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498494 PE=4 SV=1)

HSP 1 Score: 833.9 bits (2153), Expect = 2.0e-238
Identity = 428/463 (92.44%), Postives = 443/463 (95.68%), Query Frame = 0


Query: 1   MAGQRNSYGKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGR 60
           MAGQRNSYGKRN SQSDYSENGGNKRRSHGEDRDQF+ID EDTVYRYLCPVKKIGSVIGR
Sbjct: 1   MAGQRNSYGKRNHSQSDYSENGGNKRRSHGEDRDQFVIDSEDTVYRYLCPVKKIGSVIGR 60

Query: 61  GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANALEDSSDYSSPAQQALFKVH 120
           GGEIVKQLR+DTKSKIRIGETVPGSDERVITIYSASNE N+LE+SSDY SPAQ+ALFK+H
Sbjct: 61  GGEIVKQLRVDTKSKIRIGETVPGSDERVITIYSASNETNSLEESSDYVSPAQEALFKIH 120

Query: 121 HRVVADDLMGEESEGGSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDH 180
            RVVADD M E+SEGG HQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGA +RILKDDH
Sbjct: 121 DRVVADDFMDEDSEGGGHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGAQVRILKDDH 180

Query: 181 LPRCALSSDELVQHLNLVVFQISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPGVYP 240
           LPRCALSSDELV        QISGEP IV+KALYQIASRLH+NPSRSQHLLASAIPGVY 
Sbjct: 181 LPRCALSSDELV--------QISGEPLIVKKALYQIASRLHDNPSRSQHLLASAIPGVYS 240

Query: 241 SGGSLVASTHGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTE 300
           SGGSL+ASTHGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPRE+LSSKEFSLRLICPTE
Sbjct: 241 SGGSLMASTHGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREDLSSKEFSLRLICPTE 300

Query: 301 NIGGVIGKGGAVINQIRQETKAAIKVDSSATEEDDCLINISSKEFFEDSYSPTLEAALRL 360
           NIGGVIGKGGA+INQIRQETKAAIKVDSSATE DDCLINISSKEFFEDSYSPTLEAALRL
Sbjct: 301 NIGGVIGKGGAIINQIRQETKAAIKVDSSATEGDDCLINISSKEFFEDSYSPTLEAALRL 360

Query: 361 QPRCSEKVERDSGIISFTTRLLVPTTRIGCLIGKGGAIITELRRLTKANIRILSKENLPK 420
           QPRCSEKVERDSGIISFTTRLLVPT+RIGCLIGKGGAIITELRRLTKANIRILSKENLPK
Sbjct: 361 QPRCSEKVERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPK 420

Query: 421 VALEDDEMVQISGDLDVAKEALVHIVTRLRANLFDREGALSAV 464
           VALEDDEMVQISGDLDVAKEAL+HIVTRLRANLFDREGALSAV
Sbjct: 421 VALEDDEMVQISGDLDVAKEALIHIVTRLRANLFDREGALSAV 455

[Close]

BLAST of Carg02242 vs. TrEMBL
Match: tr|A0A0A0KVM1|A0A0A0KVM1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G636640 PE=4 SV=1)

HSP 1 Score: 833.9 bits (2153), Expect = 2.0e-238
Identity = 430/464 (92.67%), Postives = 443/464 (95.47%), Query Frame = 0


Query: 1   MAGQRNSYGKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGR 60
           MAGQRNSYGKRN SQSDYSENGGNKRRSHGEDRDQF+ID EDTVYRYLCPVKKIGSVIGR
Sbjct: 61  MAGQRNSYGKRNHSQSDYSENGGNKRRSHGEDRDQFVIDSEDTVYRYLCPVKKIGSVIGR 120

Query: 61  GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANALEDSSDYSSPAQQALFKVH 120
           GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNE N+LE+SSDY SPAQ+ALFK+H
Sbjct: 121 GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNETNSLEESSDYVSPAQEALFKIH 180

Query: 121 HRVVADDLMGEESEGGSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDH 180
            RVVADD M E+SEGG HQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGA +RILKDDH
Sbjct: 181 DRVVADDYMDEDSEGGGHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGAQVRILKDDH 240

Query: 181 LPRCALSSDELVQHLNLVVFQISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPGVYP 240
           LPRCALSSDELV        QISGEP IV+KALYQIASRLH+NPSRSQHLLASAIPGVY 
Sbjct: 241 LPRCALSSDELV--------QISGEPLIVKKALYQIASRLHDNPSRSQHLLASAIPGVYS 300

Query: 241 SGGSLVASTHGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTE 300
           SGGSL+A THGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPRE+LSSKEFSLRLICPTE
Sbjct: 301 SGGSLMAPTHGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREDLSSKEFSLRLICPTE 360

Query: 301 NIGGVIGKGGAVINQIRQETKAAIKVDSSATEEDDCLINISSKEFFEDSYSPTLEAALRL 360
           NIGGVIGKGGA+INQIRQETKAAIKVDSSATE DDCLINISSKEFFEDSYSPTLEAALRL
Sbjct: 361 NIGGVIGKGGAIINQIRQETKAAIKVDSSATEGDDCLINISSKEFFEDSYSPTLEAALRL 420

Query: 361 QPRCSEKVERDSGIISFTTRLLVPTTRIGCLIGKGGAIITELRRLTKANIRILSKENLPK 420
           QPRCSEKVERDSGIISFTTRLLVPT+RIGCLIGKGGAIITELRRLTKANIRILSKENLPK
Sbjct: 421 QPRCSEKVERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPK 480

Query: 421 VALEDDEMVQISGDLDVAKEALVHIVTRLRANLFDREGALSAVL 465
           VALEDDEMVQISGDLDVAKEALVHIVTRLRANLFDREGALSAVL
Sbjct: 481 VALEDDEMVQISGDLDVAKEALVHIVTRLRANLFDREGALSAVL 516

[Close]

BLAST of Carg02242 vs. TrEMBL
Match: tr|A0A1S3CA00|A0A1S3CA00_CUCME (KH domain-containing protein At4g18375 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498494 PE=4 SV=1)

HSP 1 Score: 831.2 bits (2146), Expect = 1.3e-237
Identity = 427/463 (92.22%), Postives = 442/463 (95.46%), Query Frame = 0


Query: 1   MAGQRNSYGKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGR 60
           MAGQRNSYGKRN SQSDYSENGGNKRRSHGEDRDQF+ID EDTVYRYLCPVKKIGSVIGR
Sbjct: 1   MAGQRNSYGKRNHSQSDYSENGGNKRRSHGEDRDQFVIDSEDTVYRYLCPVKKIGSVIGR 60

Query: 61  GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANALEDSSDYSSPAQQALFKVH 120
           GGEIVKQLR+DTKSKIRIGETVPGSDERVITIYSASNE N+LE+SSDY SPAQ+ALFK+H
Sbjct: 61  GGEIVKQLRVDTKSKIRIGETVPGSDERVITIYSASNETNSLEESSDYVSPAQEALFKIH 120

Query: 121 HRVVADDLMGEESEGGSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDH 180
            RVVADD M E+SEGG HQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGA +RILKDDH
Sbjct: 121 DRVVADDFMDEDSEGGGHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGAQVRILKDDH 180

Query: 181 LPRCALSSDELVQHLNLVVFQISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPGVYP 240
           LPRCALSSDELV        QISGEP IV+KALYQIASRLH+NPSRSQHLLASAIPGVY 
Sbjct: 181 LPRCALSSDELV--------QISGEPLIVKKALYQIASRLHDNPSRSQHLLASAIPGVYS 240

Query: 241 SGGSLVASTHGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTE 300
           SGGSL+ASTHGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPRE+LSSKEFSLRLICPTE
Sbjct: 241 SGGSLMASTHGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREDLSSKEFSLRLICPTE 300

Query: 301 NIGGVIGKGGAVINQIRQETKAAIKVDSSATEEDDCLINISSKEFFEDSYSPTLEAALRL 360
           NIGGVIGKGGA+INQIRQETKAAIKVDSSATE DDCLINISSKEFFEDSYSPTLEAALRL
Sbjct: 301 NIGGVIGKGGAIINQIRQETKAAIKVDSSATEGDDCLINISSKEFFEDSYSPTLEAALRL 360

Query: 361 QPRCSEKVERDSGIISFTTRLLVPTTRIGCLIGKGGAIITELRRLTKANIRILSKENLPK 420
           QPRCSEKVERDSGIISFTTRLLVPT+RIGCLIGKGGAIITELRRLTKANIRILSKEN PK
Sbjct: 361 QPRCSEKVERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENPPK 420

Query: 421 VALEDDEMVQISGDLDVAKEALVHIVTRLRANLFDREGALSAV 464
           VALEDDEMVQISGDLDVAKEAL+HIVTRLRANLFDREGALSAV
Sbjct: 421 VALEDDEMVQISGDLDVAKEALIHIVTRLRANLFDREGALSAV 455

[Close]

BLAST of Carg02242 vs. TrEMBL
Match: tr|A0A2P4KMB6|A0A2P4KMB6_QUESU (Isoform 2 of kh domain-containing protein OS=Quercus suber OX=58331 GN=CFP56_17473 PE=4 SV=1)

HSP 1 Score: 803.9 bits (2075), Expect = 2.3e-229
Identity = 434/555 (78.20%), Postives = 490/555 (88.29%), Query Frame = 0


Query: 1   MAGQRNSYGKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGR 60
           MAGQRN+YGKR  SQSD+S+NGGNKRR+ G+DRDQF+ID EDTVYRYLCPV+KIGSVIGR
Sbjct: 1   MAGQRNNYGKRTHSQSDHSDNGGNKRRNPGDDRDQFVIDSEDTVYRYLCPVRKIGSVIGR 60

Query: 61  GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANALEDSSDYSSPAQQALFKVH 120
           GGEIVKQLR DTKSKIRIGETVPG +ERV+T+YS+S+E NA ED+ +Y SPAQ ALFKVH
Sbjct: 61  GGEIVKQLRADTKSKIRIGETVPGCEERVVTLYSSSDETNAFEDTGNYVSPAQDALFKVH 120

Query: 121 HRVVADDLMGEESEGGSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDH 180
            RV+A+DL G+E   G HQVTARLLVPSDQIGC+IGKGGQIVQNIR+ETGA IRILKDDH
Sbjct: 121 DRVIAEDLHGDEESDGGHQVTARLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDDH 180

Query: 181 LPRCALSSDELVQHLNLVVFQISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPGVYP 240
           LP CALSSDELV        Q+SGE P+V+KALYQIASRLH+NPSRSQHLL S++P VY 
Sbjct: 181 LPPCALSSDELV--------QVSGEAPVVKKALYQIASRLHDNPSRSQHLLTSSVPNVYQ 240

Query: 241 SGGSLVASTHGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTE 300
           SGGSL+    GAPI+G+APL+ PYGGYKGD+G+WSRSLYSAPR++ SSKEFSLR++CPT 
Sbjct: 241 SGGSLMGPAGGAPIVGIAPLMGPYGGYKGDTGDWSRSLYSAPRDDASSKEFSLRVVCPTA 300

Query: 301 NIGGVIGKGGAVINQIRQETKAAIKVDSSATEEDDCLINISSKEFFEDSYSPTLEAALRL 360
           NIGGVIGKGGA+INQIRQE+ A IKVDSS +E DDCLI IS+KEFFED++SPT+EAA+RL
Sbjct: 301 NIGGVIGKGGAIINQIRQESGAVIKVDSSTSEGDDCLITISAKEFFEDTFSPTIEAAVRL 360

Query: 361 QPRCSEKVERDSGIISFTTRLLVPTTRIGCLIGKGGAIITELRRLTKANIRILSKENLPK 420
           QPRCSEKVERDSGIISFTTRLLVPT+RIGCLIGKGGAI+TE+RRLTKANIRILSKENLPK
Sbjct: 361 QPRCSEKVERDSGIISFTTRLLVPTSRIGCLIGKGGAIVTEMRRLTKANIRILSKENLPK 420

Query: 421 VALEDDEMVQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSESL 480
           VA +DDEMVQISGDLDVAK+AL+ +VTRLRANLFDREGA+SA LPVLPYLP+SADGS+SL
Sbjct: 421 VASDDDEMVQISGDLDVAKDALIQVVTRLRANLFDREGAVSAFLPVLPYLPVSADGSDSL 480

Query: 481 -YDGREGKRHGRGHSYSSSYGGFTDLAAGDGYGSYSXXXXXXXXXXXXXXXXXXXXXXXX 540
            Y+ R+ KRHGR HSYS  YGG +DLAA D      XXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 481 NYESRDSKRHGRVHSYSGGYGGSSDLAAADNXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540

Query: 541 XXXXGQGNVSRRRNY 555
           X   GQ  VSRRRNY
Sbjct: 541 XGLSGQAPVSRRRNY 547

[Close]

BLAST of Carg02242 vs. TrEMBL
Match: tr|A0A2N9EDU8|A0A2N9EDU8_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS5069 PE=4 SV=1)

HSP 1 Score: 791.2 bits (2042), Expect = 1.5e-225
Identity = 400/510 (78.43%), Postives = 448/510 (87.84%), Query Frame = 0


Query: 1   MAGQRNSYGKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGR 60
           MAGQRNSYGKR  S SD+S+NGG+KRR+ GEDRDQF+ID EDTVYRYLCP++KIGSVIGR
Sbjct: 1   MAGQRNSYGKRTHSHSDHSDNGGSKRRNPGEDRDQFVIDSEDTVYRYLCPIRKIGSVIGR 60

Query: 61  GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANALEDSSDYSSPAQQALFKVH 120
           GGEIVKQLR DTKSKIRIGETVPG +ERV+T+YS+S+E NA E+S +Y SPAQ ALFKVH
Sbjct: 61  GGEIVKQLRADTKSKIRIGETVPGCEERVVTVYSSSDETNAFEESGNYVSPAQDALFKVH 120

Query: 121 HRVVADDLMGEESEGGSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDH 180
            RVVA+DL G+E   G  QVTARLLVPSDQIGC+IGKGGQIVQNIR+ETGA IRILKDDH
Sbjct: 121 DRVVAEDLHGDEESDGGQQVTARLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDDH 180

Query: 181 LPRCALSSDELVQHLNLVVFQISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPGVYP 240
           LP CALSSDELV        QISGE P+V+KALYQIASRLH+NPSRSQHLL SA P VY 
Sbjct: 181 LPPCALSSDELV--------QISGEAPVVKKALYQIASRLHDNPSRSQHLLTSAAPNVYQ 240

Query: 241 SGGSLVASTHGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTE 300
           SGGSL+    GAPI+G+APL+ PYGGYKGD+G+WSRSLYSAPR+E SSKEFSLR++CPT 
Sbjct: 241 SGGSLMGPGAGAPIVGIAPLMGPYGGYKGDTGDWSRSLYSAPRDEASSKEFSLRVVCPTG 300

Query: 301 NIGGVIGKGGAVINQIRQETKAAIKVDSSATEEDDCLINISSKEFFEDSYSPTLEAALRL 360
           NIGGVIGKGGA+INQIRQE+ A IKVDSS  E DDCLI ISSKEFFED+YSP++EAA+RL
Sbjct: 301 NIGGVIGKGGAIINQIRQESGAVIKVDSSTAEGDDCLITISSKEFFEDTYSPSIEAAVRL 360

Query: 361 QPRCSEKVERDSGIISFTTRLLVPTTRIGCLIGKGGAIITELRRLTKANIRILSKENLPK 420
           QPRCSEKVERDSGIISFTTRLLVPT+RIGCLIGKGGAI+T++RR TKANIRILSKENLPK
Sbjct: 361 QPRCSEKVERDSGIISFTTRLLVPTSRIGCLIGKGGAIVTDMRRATKANIRILSKENLPK 420

Query: 421 VALEDDEMVQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSESL 480
           VA EDDEMVQISGDLDVAKEAL+ +VTRLRANLFDREG +SA LPVLPYLP+SADGS+ L
Sbjct: 421 VASEDDEMVQISGDLDVAKEALIQVVTRLRANLFDREGGVSAFLPVLPYLPVSADGSDGL 480

Query: 481 -YDGREGKRHGRGHSYSSSYGGFTDLAAGD 510
            Y+ R+ KRHGR HSYS  YG  +DLAA D
Sbjct: 481 NYESRDSKRHGRVHSYSGGYGSSSDLAAAD 502

The following BLAST results are available for this feature:

BLAST of Carg02242 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022938745.1	2.9e-281	96.04	KH domain-containing protein HEN4-like [Cucurbita moschata] >XP_022938747.1 KH d...	[more]
XP_023550244.1	1.5e-280	96.94	KH domain-containing protein HEN4-like [Cucurbita pepo subsp. pepo] >XP_02355024...	[more]
XP_022993579.1	9.8e-277	95.84	KH domain-containing protein HEN4-like [Cucurbita maxima] >XP_022993580.1 KH dom...	[more]
XP_022133717.1	5.8e-261	90.48	KH domain-containing protein HEN4 [Momordica charantia]	[more]
XP_022958668.1	5.1e-257	90.14	KH domain-containing protein HEN4-like [Cucurbita moschata]	[more]

BLAST of Carg02242 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G15270.2	6.1e-172	68.36	RNA-binding KH domain-containing protein	[more]
AT1G14170.3	7.8e-127	51.12	RNA-binding KH domain-containing protein	[more]
AT5G46190.1	4.2e-56	33.83	RNA-binding KH domain-containing protein	[more]
AT5G53060.1	8.3e-52	32.87	RNA-binding KH domain-containing protein	[more]
AT1G51580.1	7.7e-50	30.09	RNA-binding KH domain-containing protein	[more]

BLAST of Carg02242 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8W4B1\|RCF3_ARATH	1.5e-50	32.87	RNA-binding KH domain-containing protein RCF3 OS=Arabidopsis thaliana OX=3702 GN...	[more]
sp\|P58223\|Y4837_ARATH	7.6e-47	30.11	KH domain-containing protein At4g18375 OS=Arabidopsis thaliana OX=3702 GN=At4g18...	[more]
sp\|F4KDN0\|HEN4_ARATH	1.5e-31	24.16	KH domain-containing protein HEN4 OS=Arabidopsis thaliana OX=3702 GN=HEN4 PE=1 S...	[more]
sp\|Q9SR13\|FLK_ARATH	1.2e-18	32.16	Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV...	[more]
sp\|Q9SZH4\|PEP_ARATH	2.4e-16	35.12	RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Carg02242 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C9E7\|A0A1S3C9E7_CUCME	2.0e-238	92.44	KH domain-containing protein At4g18375 isoform X1 OS=Cucumis melo OX=3656 GN=LOC...	[more]
tr\|A0A0A0KVM1\|A0A0A0KVM1_CUCSA	2.0e-238	92.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G636640 PE=4 SV=1	[more]
tr\|A0A1S3CA00\|A0A1S3CA00_CUCME	1.3e-237	92.22	KH domain-containing protein At4g18375 isoform X2 OS=Cucumis melo OX=3656 GN=LOC...	[more]
tr\|A0A2P4KMB6\|A0A2P4KMB6_QUESU	2.3e-229	78.20	Isoform 2 of kh domain-containing protein OS=Quercus suber OX=58331 GN=CFP56_174...	[more]
tr\|A0A2N9EDU8\|A0A2N9EDU8_FAGSY	1.5e-225	78.43	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS5069 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003723	RNA binding
GO:0003676	nucleic acid binding

Vocabulary: **INTERPRO**
Term	Definition
IPR004088	KH_dom_type_1
IPR036612	KH_dom_type_1_sf
IPR004087	KH_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg02242-RA	Carg02242-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 289..362 e-value: 1.6E-4 score: 31.1 coord: 41..113 e-value: 9.8E-6 score: 35.1 coord: 375..450 e-value: 1.8E-11 score: 54.1 coord: 138..221 e-value: 7.7E-12 score: 55.3
IPR036612	K Homology domain, type 1 superfamily	GENE3D	G3DSA:3.30.1370.10		coord: 138..227 e-value: 2.2E-18 score: 67.6
IPR036612	K Homology domain, type 1 superfamily	GENE3D	G3DSA:3.30.1370.10		coord: 42..104 e-value: 8.3E-14 score: 52.8
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	SSF54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 376..450
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	SSF54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 135..224
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	SSF54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 38..97
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	SSF54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 286..342
IPR004088	K Homology domain, type 1	PFAM	PF00013	KH_1	coord: 45..98 e-value: 6.1E-10 score: 38.7 coord: 378..445 e-value: 1.2E-13 score: 50.6 coord: 293..342 e-value: 7.8E-11 score: 41.5 coord: 141..217 e-value: 6.3E-13 score: 48.2
None	No IPR available	GENE3D	G3DSA:3.30.310.210		coord: 290..452 e-value: 1.7E-32 score: 114.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 536..555
None	No IPR available	PANTHER	PTHR10288	KH DOMAIN CONTAINING RNA BINDING PROTEIN	coord: 1..544
None	No IPR available	PANTHER	PTHR10288:SF151	SUBFAMILY NOT NAMED	coord: 1..544
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 139..216 score: 16.206
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 290..361 score: 13.292
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 376..445 score: 15.787
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 42..109 score: 12.433
None	No IPR available	CDD	cd02396	PCBP_like_KH	coord: 292..343 e-value: 1.51085E-12 score: 62.4939
None	No IPR available	CDD	cd02396	PCBP_like_KH	coord: 378..446 e-value: 3.35057E-17 score: 75.5907
None	No IPR available	CDD	cd02396	PCBP_like_KH	coord: 44..104 e-value: 1.13966E-15 score: 71.3535
None	No IPR available	CDD	cd02396	PCBP_like_KH	coord: 141..217 e-value: 3.88021E-17 score: 75.5907

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg02242	Cla010320	Watermelon (97103) v1	carwmB0246
Carg02242	Csa5G636640	Cucumber (Chinese Long) v2	carcuB0293
Carg02242	MELO3C022000	Melon (DHL92) v3.5.1	carmeB0260
Carg02242	ClCG09G018110	Watermelon (Charleston Gray)	carwcgB0249
Carg02242	CSPI05G29030	Wild cucumber (PI 183967)	carcpiB0297
Carg02242	Cucsa.158200	Cucumber (Gy14) v1	carcgyB0309
Carg02242	CmaCh15G002630	Cucurbita maxima (Rimu)	carcmaB0362
Carg02242	CmaCh04G027710	Cucurbita maxima (Rimu)	carcmaB0374
Carg02242	CmoCh04G029010	Cucurbita moschata (Rifu)	carcmoB0370
Carg02242	CmoCh15G002720	Cucurbita moschata (Rifu)	carcmoB0362
Carg02242	Lsi02G014740	Bottle gourd (USVL1VR-Ls)	carlsiB232
Carg02242	Cp4.1LG01g22810	Cucurbita pepo (Zucchini)	carcpeB0374
Carg02242	Cp4.1LG13g08490	Cucurbita pepo (Zucchini)	carcpeB0366
Carg02242	CsGy0G000490	Cucumber (Gy14) v2	carcgybB0272
Carg02242	CsGy5G028440	Cucumber (Gy14) v2	carcgybB0280
Carg02242	MELO3C022000.2	Melon (DHL92) v3.6.1	carmedB0270
Carg02242	CsaV3_5G038150	Cucumber (Chinese Long) v3	carcucB0296
Carg02242	Cla97C09G179500	Watermelon (97103) v2	carwmbB0279
Carg02242	Bhi06G000317	Wax gourd	carwgoB0339

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg02242	Carg04377	Silver-seed gourd	carcarB306

The following block(s) are covering this gene:


Gene	Organism	Block
Carg02242	Silver-seed gourd	carcarB111
Carg02242	Silver-seed gourd	carcarB249
Carg02242	Silver-seed gourd	carcarB299
Carg02242	Cucumber (Gy14) v2	carcgybB0275
Carg02242	Cucumber (Gy14) v1	carcgyB0305
Carg02242	Cucumber (Gy14) v1	carcgyB0321
Carg02242	Cucurbita maxima (Rimu)	carcmaB0358
Carg02242	Cucurbita maxima (Rimu)	carcmaB0360
Carg02242	Cucurbita moschata (Rifu)	carcmoB0358
Carg02242	Cucurbita moschata (Rifu)	carcmoB0360
Carg02242	Cucurbita pepo (Zucchini)	carcpeB0364
Carg02242	Cucurbita pepo (Zucchini)	carcpeB0378
Carg02242	Cucurbita pepo (Zucchini)	carcpeB0380
Carg02242	Wild cucumber (PI 183967)	carcpiB0292
Carg02242	Wild cucumber (PI 183967)	carcpiB0289
Carg02242	Cucumber (Chinese Long) v2	carcuB0288
Carg02242	Cucumber (Chinese Long) v3	carcucB0291
Carg02242	Bottle gourd (USVL1VR-Ls)	carlsiB234
Carg02242	Bottle gourd (USVL1VR-Ls)	carlsiB238
Carg02242	Melon (DHL92) v3.5.1	carmeB0265
Carg02242	Melon (DHL92) v3.5.1	carmeB0273
Carg02242	Melon (DHL92) v3.6.1	carmedB0276
Carg02242	Melon (DHL92) v3.6.1	carmedB0284
Carg02242	Watermelon (Charleston Gray)	carwcgB0252
Carg02242	Watermelon (Charleston Gray)	carwcgB0256
Carg02242	Watermelon (97103) v1	carwmB0249
Carg02242	Watermelon (97103) v1	carwmB0256
Carg02242	Watermelon (97103) v1	carwmB0257
Carg02242	Watermelon (97103) v2	carwmbB0265
Carg02242	Watermelon (97103) v2	carwmbB0273
Carg02242	Wax gourd	carwgoB0352