Carg02165 (gene) Silver-seed gourd

NameCarg02165
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_007 : 359995 .. 361113 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTCTGAGAAAGAAAACGACGATAAATAATTCTGATTGGTCGGAGAGGCGAGAGAATGTGAGAGGGAGGGAGCGGCGGCGATTTCGTCGGAAGGATGAGACTGCGGCAGCAAAAATGTGCCGCGGAGCAGTGTGCAGCGGCTGGTAACAGAAGGGACGGGCCGGGTGAGAAGGGTTTAAGAGAAAAGGAAAGCTAGGATGGTTAAAATAATTTTAAAAAGAAATTAATTTAAGTTTAAATTTATTTTCAAATTCCATTTAATTTTTAACACAAAATTAGTTAAATAAAATCGTTTTTCCTCGAAAATAGTATTAAACTTAACCCAAAAAATCACCTAATTTTTAAATAAATAGAGTAAAAAAAAAAATAGAGATGAAAAATGTATTGTATATTTAGTTAGAAAGAATATTTGTAAATATTATTTTATTATTTTTATATTATTAATTTATTTAAATTTAAAGTCAACATTACAACAGCTATGTAAATTTAATGTTTAATGTTTAATTTGATGAATTTAGAAGTAAAATTTAAAAATTCAAAATTATTAATTAAATTTATTTTATATCGATTTAATAGTCAATTTATTCCATTAATTTGGGTCCAAGGTTTCCATTTATTTATTATTATTATTATTATTGAAGTAACAATAATATAATTTTATCTCACACATTTAAGCATGGCAAAATTTGTGGCTAAGCCACCAAGAATTCCAAACAATCGGTATCATTATTAAATAGCAACCGATTTTCCTCTCACAAGCTTATCAACAATTTTGGAGAACAACTAGGAGGTGGAGTGGTCCCCACGATGACGTCACCCATGTACAATCCCGGAAAACACTTCATTTTGTAATATAATAATATTTTTTTAAGTCTACGAGGCAAATTTACTAATATCTTAGGCACGTGGCAGGAATCAATTGGATTCCTTGGGTCCAGTCAACCCCGATATTTTTTTTCCCATTTTTTCCGTCTGAAAAGGAAAACGGCTCCGTCCTTTGACTTCAATCCCTCCCATAGAGCTTCTTCTTGTTCTTCTTTTGCTGCGGGATGGGCATTATTTGTCTCTTTCTCGGAGGGAATGATGAACTCAGGGCCTGGACTTATCTCTCCTTGA

mRNA sequence

ATGTTTCTGAGAAAGAAAACGACGATAAATAATTCTGATTGGTCGGAGAGGCGAGAGAATGTGAGAGGGAGGGAGCGGCGGCGATTTCGTCGGAAGGATGAGACTGCGGCAGCAAAAATGTGCCGCGGAGCAGTGTGCAGCGGCTGGAAAACGGCTCCGTCCTTTGACTTCAATCCCTCCCATAGAGCTTCTTCTTGTTCTTCTTTTGCTGCGGGATGGGCATTATTTGTCTCTTTCTCGGAGGGAATGATGAACTCAGGGCCTGGACTTATCTCTCCTTGA

Coding sequence (CDS)

ATGTTTCTGAGAAAGAAAACGACGATAAATAATTCTGATTGGTCGGAGAGGCGAGAGAATGTGAGAGGGAGGGAGCGGCGGCGATTTCGTCGGAAGGATGAGACTGCGGCAGCAAAAATGTGCCGCGGAGCAGTGTGCAGCGGCTGGAAAACGGCTCCGTCCTTTGACTTCAATCCCTCCCATAGAGCTTCTTCTTGTTCTTCTTTTGCTGCGGGATGGGCATTATTTGTCTCTTTCTCGGAGGGAATGATGAACTCAGGGCCTGGACTTATCTCTCCTTGA

Protein sequence

MFLRKKTTINNSDWSERRENVRGRERRRFRRKDETAAAKMCRGAVCSGWKTAPSFDFNPSHRASSCSSFAAGWALFVSFSEGMMNSGPGLISP
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg02165-RACarg02165-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..30
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 10..30

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg02165Silver-seed gourdcarcarB020
Carg02165Cucumber (Gy14) v2carcgybB0277
Carg02165Cucumber (Gy14) v2carcgybB0284
Carg02165Cucumber (Gy14) v1carcgyB0306
Carg02165Cucumber (Gy14) v1carcgyB0319
Carg02165Cucurbita maxima (Rimu)carcmaB0362
Carg02165Cucurbita maxima (Rimu)carcmaB0366
Carg02165Cucurbita maxima (Rimu)carcmaB0374
Carg02165Cucurbita maxima (Rimu)carcmaB0375
Carg02165Cucurbita moschata (Rifu)carcmoB0362
Carg02165Cucurbita moschata (Rifu)carcmoB0363
Carg02165Cucurbita moschata (Rifu)carcmoB0370
Carg02165Cucurbita moschata (Rifu)carcmoB0373
Carg02165Cucurbita pepo (Zucchini)carcpeB0365
Carg02165Cucurbita pepo (Zucchini)carcpeB0366
Carg02165Cucurbita pepo (Zucchini)carcpeB0374
Carg02165Wild cucumber (PI 183967)carcpiB0294
Carg02165Wild cucumber (PI 183967)carcpiB0301
Carg02165Cucumber (Chinese Long) v2carcuB0290
Carg02165Cucumber (Chinese Long) v2carcuB0297
Carg02165Cucumber (Chinese Long) v3carcucB0293
Carg02165Cucumber (Chinese Long) v3carcucB0300
Carg02165Bottle gourd (USVL1VR-Ls)carlsiB231
Carg02165Bottle gourd (USVL1VR-Ls)carlsiB236
Carg02165Bottle gourd (USVL1VR-Ls)carlsiB242
Carg02165Melon (DHL92) v3.5.1carmeB0269
Carg02165Melon (DHL92) v3.6.1carmedB0280
Carg02165Melon (DHL92) v3.6.1carmedB0285
Carg02165Watermelon (Charleston Gray)carwcgB0255
Carg02165Watermelon (Charleston Gray)carwcgB0257
Carg02165Watermelon (Charleston Gray)carwcgB0260
Carg02165Watermelon (97103) v1carwmB0254
Carg02165Watermelon (97103) v1carwmB0259
Carg02165Watermelon (97103) v1carwmB0260
Carg02165Watermelon (97103) v2carwmbB0269
Carg02165Watermelon (97103) v2carwmbB0272
Carg02165Wax gourdcarwgoB0348
Carg02165Wax gourdcarwgoB0349
Carg02165Wax gourdcarwgoB0351