Carg02103 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg02103
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Ras-related protein like
Location	Cucurbita_argyrosperma_scaffold_007 : 79271 .. 80551 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTGTTTTTCTTCTCTTTTATCGTCTTCAACCCTAACCATTTCTCCATCCCGTTTCTTTTCTCCACAATCAAACCAATTCTCCAAGGCGTTATGCTCAGAAAATGCGATTGCTAATGCGTTTATTTCTTCTGAATCGTTTGTTGTTGGATCTGGCAGGTGTTAGCCTCGGAATTTGATTAGGAGTTTCATCAAATGGCTTACAAGGTGGATCACGAATACGATTATCTCTTCAAGATTGTGTTGATCGGTGATTCTGGCGTTGGAAAGTCCAATATTCTCTCCAGGTTTACGCGGAACGAGTTCTGTTTGGAATCCAAGTCAACAATCGGAGTTGAATTCGCTACGCGGACTTTGCAGGTTGGCTACGCTTCCGCCATTTTCTATTCCTTTTTTCCCACTCAAATCAAAGTCATATCCATGTTAGTATATTAACTGTGTTGTCCTCCTCATAGATCAATCAATTACTTCCTATCCTTCATCCTTACTTAATTAACAACTCGAGAAGTTTGACGAACTCGAATAAATCAAAGAACGCTGTCATAATTGTATTAACTAGCCTGGATTGAAGATTTTCTCCTCATTTACAAGTTCGAATCTGAACGATGGATGTTGACGTACATTTTTGTTGCCTGGATTTAAACCTAGAGAGTTTAAATTTGAATACAGAAATCAGGTGTAGGGTGGACATGAACAATGGAGGAAGTCGAATGATTTGTTTTCATATTTTTTGAAATTGAAAAGAAATGGAGTCTGTATTCAATTAGATGATTGTTTAGAATTGGTTTGAAACAGGTAGAGGGGAAGACAGTGAAGGCCCAAATATGGGACACAGCAGGGCAAGAGAGATACCGAGCCATTACGAGTGCTTATTACAGAGGAGCAGTGGGTGCACTTTTGGTATATGATATTACCAAGAGACAAACCTTTGACAATGTCCAAAGATGGCTACGCGAACTGAGAGACCATGCTGATTCCAACATCGTGATCATGATGGCCGGAAACAAGGCCGATCTGAACCATCTCCGGGCAGTTTCGGCCGAAGATGCTCAGGTTTTAGCAGAGAAAGAAGGGCTGTCATTTCTCGAGACCTCAGCCTTGGAGGCCTTGAACGTCGAGAAGGCTTTCCAGACCATTTTGCTCGACATTTACCACATCATTAGCAAAAAAGCTTTGGCCGCTCAGGAGGCCGCTTCCACCCCCGGCCTCCCTCACGGCACCACCATCAACGTCGCTAATATCTCAGGCAACTACAACAAGAGAAGTTGTTGCTCTAATTGA

mRNA sequence

TTTTTGTTTTTCTTCTCTTTTATCGTCTTCAACCCTAACCATTTCTCCATCCCGTTTCTTTTCTCCACAATCAAACCAATTCTCCAAGGCGTTATGCTCAGAAAATGCGATTGCTAATGCGTTTATTTCTTCTGAATCGTTTGTTGTTGGATCTGGCAGGTGTTAGCCTCGGAATTTGATTAGGAGTTTCATCAAATGGCTTACAAGGTGGATCACGAATACGATTATCTCTTCAAGATTGTGTTGATCGGTGATTCTGGCGTTGGAAAGTCCAATATTCTCTCCAGGTTTACGCGGAACGAGTTCTGTTTGGAATCCAAGTCAACAATCGGAGTTGAATTCGCTACGCGGACTTTGCAGGTAGAGGGGAAGACAGTGAAGGCCCAAATATGGGACACAGCAGGGCAAGAGAGATACCGAGCCATTACGAGTGCTTATTACAGAGGAGCAGTGGGTGCACTTTTGGTATATGATATTACCAAGAGACAAACCTTTGACAATGTCCAAAGATGGCTACGCGAACTGAGAGACCATGCTGATTCCAACATCGTGATCATGATGGCCGGAAACAAGGCCGATCTGAACCATCTCCGGGCAGTTTCGGCCGAAGATGCTCAGGTTTTAGCAGAGAAAGAAGGGCTGTCATTTCTCGAGACCTCAGCCTTGGAGGCCTTGAACGTCGAGAAGGCTTTCCAGACCATTTTGCTCGACATTTACCACATCATTAGCAAAAAAGCTTTGGCCGCTCAGGAGGCCGCTTCCACCCCCGGCCTCCCTCACGGCACCACCATCAACGTCGCTAATATCTCAGGCAACTACAACAAGAGAAGTTGTTGCTCTAATTGA

Coding sequence (CDS)

ATGGCTTACAAGGTGGATCACGAATACGATTATCTCTTCAAGATTGTGTTGATCGGTGATTCTGGCGTTGGAAAGTCCAATATTCTCTCCAGGTTTACGCGGAACGAGTTCTGTTTGGAATCCAAGTCAACAATCGGAGTTGAATTCGCTACGCGGACTTTGCAGGTAGAGGGGAAGACAGTGAAGGCCCAAATATGGGACACAGCAGGGCAAGAGAGATACCGAGCCATTACGAGTGCTTATTACAGAGGAGCAGTGGGTGCACTTTTGGTATATGATATTACCAAGAGACAAACCTTTGACAATGTCCAAAGATGGCTACGCGAACTGAGAGACCATGCTGATTCCAACATCGTGATCATGATGGCCGGAAACAAGGCCGATCTGAACCATCTCCGGGCAGTTTCGGCCGAAGATGCTCAGGTTTTAGCAGAGAAAGAAGGGCTGTCATTTCTCGAGACCTCAGCCTTGGAGGCCTTGAACGTCGAGAAGGCTTTCCAGACCATTTTGCTCGACATTTACCACATCATTAGCAAAAAAGCTTTGGCCGCTCAGGAGGCCGCTTCCACCCCCGGCCTCCCTCACGGCACCACCATCAACGTCGCTAATATCTCAGGCAACTACAACAAGAGAAGTTGTTGCTCTAATTGA

Protein sequence

MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAASTPGLPHGTTINVANISGNYNKRSCCSN

Homology

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BLAST of Carg02103 vs. NCBI nr
Match: XP_022938534.1 (ras-related protein Rab2BV-like [Cucurbita moschata] >XP_022938535.1 ras-related protein Rab2BV-like [Cucurbita moschata] >XP_023549819.1 ras-related protein Rab2BV-like [Cucurbita pepo subsp. pepo] >XP_023549820.1 ras-related protein Rab2BV-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 424.1 bits (1089), Expect = 2.9e-115
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
           MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
           MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK
Sbjct: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180

Query: 181 ALAAQEAASTPGLPHGTTINVANISGNYNKRSCCSN 217
           ALAAQEAASTPGLPHGTTINVANISGNYNKRSCCSN
Sbjct: 181 ALAAQEAASTPGLPHGTTINVANISGNYNKRSCCSN 216

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BLAST of Carg02103 vs. NCBI nr
Match: XP_022134462.1 (ras-related protein Rab2BV-like [Momordica charantia] >XP_022134463.1 ras-related protein Rab2BV-like [Momordica charantia])

HSP 1 Score: 423.3 bits (1087), Expect = 4.9e-115
Identity = 215/216 (99.54%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
           MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
           MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK
Sbjct: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180

Query: 181 ALAAQEAASTPGLPHGTTINVANISGNYNKRSCCSN 217
           ALAAQEAASTPGLPHGTTINVAN+SGNYNKRSCCSN
Sbjct: 181 ALAAQEAASTPGLPHGTTINVANLSGNYNKRSCCSN 216

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BLAST of Carg02103 vs. NCBI nr
Match: XP_022993834.1 (ras-related protein Rab2BV-like [Cucurbita maxima] >XP_022993835.1 ras-related protein Rab2BV-like [Cucurbita maxima])

HSP 1 Score: 423.3 bits (1087), Expect = 4.9e-115
Identity = 215/216 (99.54%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
           MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
           MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK
Sbjct: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180

Query: 181 ALAAQEAASTPGLPHGTTINVANISGNYNKRSCCSN 217
           ALAAQEAASTPG+PHGTTINVANISGNYNKRSCCSN
Sbjct: 181 ALAAQEAASTPGIPHGTTINVANISGNYNKRSCCSN 216

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BLAST of Carg02103 vs. NCBI nr
Match: XP_022962630.1 (ras-related protein Rab2BV-like [Cucurbita moschata] >XP_023527214.1 ras-related protein Rab2BV-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 422.2 bits (1084), Expect = 1.1e-114
Identity = 214/216 (99.07%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
           MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
           MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK
Sbjct: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180

Query: 181 ALAAQEAASTPGLPHGTTINVANISGNYNKRSCCSN 217
           ALAAQEAASTPG+PHGTTINVANISGNYNKR+CCSN
Sbjct: 181 ALAAQEAASTPGIPHGTTINVANISGNYNKRTCCSN 216

[Close]

BLAST of Carg02103 vs. NCBI nr
Match: XP_022990563.1 (ras-related protein Rab2BV-like [Cucurbita maxima])

HSP 1 Score: 422.2 bits (1084), Expect = 1.1e-114
Identity = 214/216 (99.07%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
           MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 14  MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 73

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI
Sbjct: 74  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 133

Query: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
           MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK
Sbjct: 134 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 193

Query: 181 ALAAQEAASTPGLPHGTTINVANISGNYNKRSCCSN 217
           ALAAQEAASTPG+PHGTTINVANISGNYNKR+CCSN
Sbjct: 194 ALAAQEAASTPGIPHGTTINVANISGNYNKRTCCSN 229

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BLAST of Carg02103 vs. TAIR10
Match: AT5G59150.1 (RAB GTPase homolog A2D)

HSP 1 Score: 353.2 bits (905), Expect = 1.1e-97
Identity = 186/219 (84.93%), Postives = 197/219 (89.95%), Query Frame = 0


Query: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
           MA++V+ +YDYLFKIVLIGDSGVGK+NILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1   MAHRVEQDYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNV RWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120

Query: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
           MMAGNKADLNHLR+V+ ED Q LAE EGLSFLETSALEA NVEKAFQT+L +IYHIISKK
Sbjct: 121 MMAGNKADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKK 180

Query: 181 ALAAQEAAST----PGLPHGTTINVANISGNYNKRSCCS 216
           ALAAQEAA+     PG   GTTINV + SG   KR CCS
Sbjct: 181 ALAAQEAAAANSAIPG--QGTTINVEDTSG-AGKRGCCS 216

[Close]

BLAST of Carg02103 vs. TAIR10
Match: AT3G46830.1 (RAB GTPase homolog A2C)

HSP 1 Score: 334.0 bits (855), Expect = 7.1e-92
Identity = 179/220 (81.36%), Postives = 190/220 (86.36%), Query Frame = 0


Query: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
           M ++VD EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRT QVEGKT
Sbjct: 1   MTHRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
           +KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNV RWLRELRDHADSNIVI
Sbjct: 61  IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120

Query: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
           MMAGNK+DLNHLR+V+ ED Q L        LETSALEA NVEKAFQTIL +IYHIISKK
Sbjct: 121 MMAGNKSDLNHLRSVAEEDGQSLXXXXXXXXLETSALEATNVEKAFQTILGEIYHIISKK 180

Query: 181 ALAAQEAAST----PGLPHGTTINVANISGNYNKRSCCSN 217
           ALAAQEAA+     PG   GTTINV + SG   KR+CCS+
Sbjct: 181 ALAAQEAAAANSAIPG--QGTTINVDDTSGG-AKRACCSS 217

[Close]

BLAST of Carg02103 vs. TAIR10
Match: AT1G07410.1 (RAB GTPase homolog A2B)

HSP 1 Score: 329.7 bits (844), Expect = 1.3e-90
Identity = 173/216 (80.09%), Postives = 188/216 (87.04%), Query Frame = 0


Query: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
           MA ++DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1   MANRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTF+NV RWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVI 120

Query: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
           MMAGNK+DLNHLR+V+ ED +           ETSALEA N+EKAFQTIL +IYHIISKK
Sbjct: 121 MMAGNKSDLNHLRSVADEDGRSXXXXXXXXXXETSALEATNIEKAFQTILSEIYHIISKK 180

Query: 181 ALAAQEAA-STPGLPHGTTINVANISGNYNKRSCCS 216
           ALAAQEAA + PG   GT IN+++ S   N++ CCS
Sbjct: 181 ALAAQEAAGNLPG--QGTAINISDSSAT-NRKGCCS 213

[Close]

BLAST of Carg02103 vs. TAIR10
Match: AT1G09630.1 (RAB GTPase 11C)

HSP 1 Score: 327.0 bits (837), Expect = 8.7e-90
Identity = 163/216 (75.46%), Postives = 187/216 (86.57%), Query Frame = 0


Query: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
           MA + D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1   MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  TF+NV RWL+ELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI 120

Query: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
           M+ GNK DL HLRAV+ EDAQ  AEKEGLSF+ETSALEALNVEKAFQTIL ++Y IISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKK 180

Query: 181 ALAAQEAASTPGLPHGTTINVANISGNYNKRSCCSN 217
           ++++ +  +   +  G TI+VA  S +  K+ CCS+
Sbjct: 181 SISSDQTTANANIKEGQTIDVAATSESNAKKPCCSS 216

[Close]

BLAST of Carg02103 vs. TAIR10
Match: AT5G60860.1 (RAB GTPase homolog A1F)

HSP 1 Score: 290.0 bits (741), Expect = 1.2e-78
Identity = 148/217 (68.20%), Postives = 171/217 (78.80%), Query Frame = 0


Query: 2   AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
           AY+ D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++ V+ K V
Sbjct: 3   AYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIV 62

Query: 62  KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIM 121
           KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+  TF+NV+RWL+ELRDH D+NIVIM
Sbjct: 63  KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIM 122

Query: 122 MAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
             GNKADL HLRAVS EDA+  AE+E   F+ETSALE++NVE AF  +L  IY ++S+KA
Sbjct: 123 FVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSRKA 182

Query: 182 LAAQEAASTPGLPHGTTINVANIS--GNYNKRSCCSN 217
           L   +      LP G TINV +        K  CCSN
Sbjct: 183 LDIGD--DPAALPKGQTINVGSKDDVSAVKKVGCCSN 217

[Close]

BLAST of Carg02103 vs. Swiss-Prot
Match: sp|Q39434|RB2BV_BETVU (Ras-related protein Rab2BV OS=Beta vulgaris OX=161934 GN=RAB2BV PE=2 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 1.4e-100
Identity = 193/216 (89.35%), Postives = 201/216 (93.06%), Query Frame = 0


Query: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
           MA +VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1   MANRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
           MMAGNK+DL HLRAVS ED Q LAEKEGLSFLETSALEA+N+EKAFQTIL +IYHIISKK
Sbjct: 121 MMAGNKSDLKHLRAVSEEDGQALAEKEGLSFLETSALEAVNIEKAFQTILTEIYHIISKK 180

Query: 181 ALAAQEAAST-PGLPHGTTINVANISGNYNKRSCCS 216
           ALAAQEA+S  PG   GTTINVA+ S N  +RSCCS
Sbjct: 181 ALAAQEASSNLPG--QGTTINVADASAN-QRRSCCS 213

[Close]

BLAST of Carg02103 vs. Swiss-Prot
Match: sp|Q40193|RB11C_LOTJA (Ras-related protein Rab11C OS=Lotus japonicus OX=34305 GN=RAB11C PE=2 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 3.0e-100
Identity = 188/216 (87.04%), Postives = 200/216 (92.59%), Query Frame = 0


Query: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
           MA++VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1   MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
           MMAGNK+DLNHLRAVS +D   L+EKEGLSFLETSALEA N+EKAFQTIL +IYHI+SKK
Sbjct: 121 MMAGNKSDLNHLRAVSEDDGGALSEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKK 180

Query: 181 ALAAQEAASTPGLP-HGTTINVANISGNYNKRSCCS 216
           ALAAQEA +   +P  GTTINVA+ SGN  K+ CCS
Sbjct: 181 ALAAQEATAGASVPGQGTTINVADTSGN-TKKGCCS 215

[Close]

BLAST of Carg02103 vs. Swiss-Prot
Match: sp|Q40523|RB11A_TOBAC (Ras-related protein Rab11A OS=Nicotiana tabacum OX=4097 GN=RAB11A PE=2 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 4.8e-98
Identity = 186/216 (86.11%), Postives = 198/216 (91.67%), Query Frame = 0


Query: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
           MA +VDHEYDYLFK+VLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1   MANRVDHEYDYLFKMVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALL YDITKRQTFDNVQRWLRELRDH DSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLFYDITKRQTFDNVQRWLRELRDHRDSNIVI 120

Query: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
           ++AGNK+DL HLRAVS +D Q L +KEGLSFLETSALEALNV+KAFQTIL DIYHIISKK
Sbjct: 121 ILAGNKSDLKHLRAVSEQDDQALVKKEGLSFLETSALEALNVDKAFQTILTDIYHIISKK 180

Query: 181 ALAAQEAASTPGLP-HGTTINVANISGNYNKRSCCS 216
           ALAAQEAA++  LP  GTTINV++ S N  KR CCS
Sbjct: 181 ALAAQEAAASTALPGQGTTINVSDNSANV-KRGCCS 215

[Close]

BLAST of Carg02103 vs. Swiss-Prot
Match: sp|Q9FIF9|RAA2D_ARATH (Ras-related protein RABA2d OS=Arabidopsis thaliana OX=3702 GN=RABA2D PE=2 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 2.0e-96
Identity = 186/219 (84.93%), Postives = 197/219 (89.95%), Query Frame = 0


Query: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
           MA++V+ +YDYLFKIVLIGDSGVGK+NILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1   MAHRVEQDYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNV RWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120

Query: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
           MMAGNKADLNHLR+V+ ED Q LAE EGLSFLETSALEA NVEKAFQT+L +IYHIISKK
Sbjct: 121 MMAGNKADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKK 180

Query: 181 ALAAQEAAST----PGLPHGTTINVANISGNYNKRSCCS 216
           ALAAQEAA+     PG   GTTINV + SG   KR CCS
Sbjct: 181 ALAAQEAAAANSAIPG--QGTTINVEDTSG-AGKRGCCS 216

[Close]

BLAST of Carg02103 vs. Swiss-Prot
Match: sp|Q96283|RAA2C_ARATH (Ras-related protein RABA2c OS=Arabidopsis thaliana OX=3702 GN=RABA2C PE=2 SV=4)

HSP 1 Score: 334.0 bits (855), Expect = 1.3e-90
Identity = 179/220 (81.36%), Postives = 190/220 (86.36%), Query Frame = 0


Query: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
           M ++VD EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRT QVEGKT
Sbjct: 1   MTHRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
           +KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNV RWLRELRDHADSNIVI
Sbjct: 61  IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120

Query: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
           MMAGNK+DLNHLR+V+ ED Q L        LETSALEA NVEKAFQTIL +IYHIISKK
Sbjct: 121 MMAGNKSDLNHLRSVAEEDGQSLXXXXXXXXLETSALEATNVEKAFQTILGEIYHIISKK 180

Query: 181 ALAAQEAAST----PGLPHGTTINVANISGNYNKRSCCSN 217
           ALAAQEAA+     PG   GTTINV + SG   KR+CCS+
Sbjct: 181 ALAAQEAAAANSAIPG--QGTTINVDDTSGG-AKRACCSS 217

[Close]

BLAST of Carg02103 vs. TrEMBL
Match: tr|A0A0A0KBH8|A0A0A0KBH8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G008830 PE=4 SV=1)

HSP 1 Score: 420.6 bits (1080), Expect = 2.1e-114
Identity = 214/216 (99.07%), Postives = 214/216 (99.07%), Query Frame = 0


Query: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
           MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
           MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK
Sbjct: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180

Query: 181 ALAAQEAASTPGLPHGTTINVANISGNYNKRSCCSN 217
           ALAAQEA S PGLPHGTTINVANISGNYNKRSCCSN
Sbjct: 181 ALAAQEATSNPGLPHGTTINVANISGNYNKRSCCSN 216

[Close]

BLAST of Carg02103 vs. TrEMBL
Match: tr|A0A1S3B3E1|A0A1S3B3E1_CUCME (ras-related protein Rab2BV OS=Cucumis melo OX=3656 GN=LOC103485535 PE=4 SV=1)

HSP 1 Score: 416.8 bits (1070), Expect = 3.0e-113
Identity = 211/216 (97.69%), Postives = 214/216 (99.07%), Query Frame = 0


Query: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
           MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
           MMAGNKADLNHLRAVSAEDAQ+LAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK
Sbjct: 121 MMAGNKADLNHLRAVSAEDAQLLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180

Query: 181 ALAAQEAASTPGLPHGTTINVANISGNYNKRSCCSN 217
           ALAAQEA S PGLPHGTTINVAN+SGNY+KRSCCSN
Sbjct: 181 ALAAQEATSNPGLPHGTTINVANLSGNYSKRSCCSN 216

[Close]

BLAST of Carg02103 vs. TrEMBL
Match: tr|A0A067L8Y4|A0A067L8Y4_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_01362 PE=4 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 4.5e-109
Identity = 205/216 (94.91%), Postives = 211/216 (97.69%), Query Frame = 0


Query: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
           MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
           MMAGNK+DLNHLRAVSAEDAQ+LAEKE LSFLETSALEALNVEKAFQTILLDIYHIISKK
Sbjct: 121 MMAGNKSDLNHLRAVSAEDAQMLAEKETLSFLETSALEALNVEKAFQTILLDIYHIISKK 180

Query: 181 ALAAQEAASTPGLPHGTTINVANISGNYNKRSCCSN 217
           ALAAQEAA++ G+PHGTTINVAN+S N NKR CCSN
Sbjct: 181 ALAAQEAANSTGVPHGTTINVANLSSNGNKRPCCSN 216

[Close]

BLAST of Carg02103 vs. TrEMBL
Match: tr|A0A067G0M1|A0A067G0M1_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g042687mg PE=4 SV=1)

HSP 1 Score: 400.2 bits (1027), Expect = 2.9e-108
Identity = 203/216 (93.98%), Postives = 210/216 (97.22%), Query Frame = 0


Query: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
           MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNV RWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120

Query: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
           MMAGNK+DLNHLRAV+AEDAQ+LAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK
Sbjct: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180

Query: 181 ALAAQEAASTPGLPHGTTINVANISGNYNKRSCCSN 217
           ALAAQEAAS+ GLP GTTINVAN+SGN   ++CCSN
Sbjct: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACCSN 216

[Close]

BLAST of Carg02103 vs. TrEMBL
Match: tr|B9SE28|B9SE28_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1482930 PE=4 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 3.8e-108
Identity = 202/216 (93.52%), Postives = 211/216 (97.69%), Query Frame = 0


Query: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
           MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
           MMAGNK+DLNHLRAVSAEDA++LAEKEGLSFLETSALEA N+EKAFQ+ILLDIYHIISKK
Sbjct: 121 MMAGNKSDLNHLRAVSAEDARMLAEKEGLSFLETSALEAHNIEKAFQSILLDIYHIISKK 180

Query: 181 ALAAQEAASTPGLPHGTTINVANISGNYNKRSCCSN 217
           ALAAQEAA++ GLP GTTINVAN+SGN NKR CC+N
Sbjct: 181 ALAAQEAANSTGLPQGTTINVANLSGNVNKRPCCTN 216

The following BLAST results are available for this feature:

BLAST of Carg02103 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022938534.1	2.9e-115	100.00	ras-related protein Rab2BV-like [Cucurbita moschata] >XP_022938535.1 ras-related...	[more]
XP_022134462.1	4.9e-115	99.54	ras-related protein Rab2BV-like [Momordica charantia] >XP_022134463.1 ras-relate...	[more]
XP_022993834.1	4.9e-115	99.54	ras-related protein Rab2BV-like [Cucurbita maxima] >XP_022993835.1 ras-related p...	[more]
XP_022962630.1	1.1e-114	99.07	ras-related protein Rab2BV-like [Cucurbita moschata] >XP_023527214.1 ras-related...	[more]
XP_022990563.1	1.1e-114	99.07	ras-related protein Rab2BV-like [Cucurbita maxima]	[more]

BLAST of Carg02103 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G59150.1	1.1e-97	84.93	RAB GTPase homolog A2D	[more]
AT3G46830.1	7.1e-92	81.36	RAB GTPase homolog A2C	[more]
AT1G07410.1	1.3e-90	80.09	RAB GTPase homolog A2B	[more]
AT1G09630.1	8.7e-90	75.46	RAB GTPase 11C	[more]
AT5G60860.1	1.2e-78	68.20	RAB GTPase homolog A1F	[more]

BLAST of Carg02103 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q39434\|RB2BV_BETVU	1.4e-100	89.35	Ras-related protein Rab2BV OS=Beta vulgaris OX=161934 GN=RAB2BV PE=2 SV=1	[more]
sp\|Q40193\|RB11C_LOTJA	3.0e-100	87.04	Ras-related protein Rab11C OS=Lotus japonicus OX=34305 GN=RAB11C PE=2 SV=1	[more]
sp\|Q40523\|RB11A_TOBAC	4.8e-98	86.11	Ras-related protein Rab11A OS=Nicotiana tabacum OX=4097 GN=RAB11A PE=2 SV=1	[more]
sp\|Q9FIF9\|RAA2D_ARATH	2.0e-96	84.93	Ras-related protein RABA2d OS=Arabidopsis thaliana OX=3702 GN=RABA2D PE=2 SV=1	[more]
sp\|Q96283\|RAA2C_ARATH	1.3e-90	81.36	Ras-related protein RABA2c OS=Arabidopsis thaliana OX=3702 GN=RABA2C PE=2 SV=4	[more]

BLAST of Carg02103 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KBH8\|A0A0A0KBH8_CUCSA	2.1e-114	99.07	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G008830 PE=4 SV=1	[more]
tr\|A0A1S3B3E1\|A0A1S3B3E1_CUCME	3.0e-113	97.69	ras-related protein Rab2BV OS=Cucumis melo OX=3656 GN=LOC103485535 PE=4 SV=1	[more]
tr\|A0A067L8Y4\|A0A067L8Y4_JATCU	4.5e-109	94.91	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_01362 PE=4 SV=1	[more]
tr\|A0A067G0M1\|A0A067G0M1_CITSI	2.9e-108	93.98	Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g042687mg PE=4 SV=1	[more]
tr\|B9SE28\|B9SE28_RICCO	3.8e-108	93.52	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1482930 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003924	GTPase activity
GO:0005525	GTP binding

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR001806	Small_GTPase
IPR005225	Small_GTP-bd_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg02103-RA	Carg02103-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 54..76 score: 53.54 coord: 13..34 score: 52.05 coord: 151..173 score: 42.31 coord: 36..52 score: 36.23 coord: 116..129 score: 44.56
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 18..213 e-value: 7.3E-9 score: 45.4
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 15..172 e-value: 1.3E-10 score: 16.5
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 1..185 e-value: 0.0071 score: -2.4
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 10..176 e-value: 1.4E-27 score: 107.6
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 13..176 e-value: 1.1E-111 score: 387.0
None	No IPR available	GENE3D	G3DSA:3.40.50.300		coord: 10..193 e-value: 3.2E-67 score: 227.6
None	No IPR available	PANTHER	PTHR24073:SF495	RAS-RELATED PROTEIN RABA2B	coord: 1..215
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 1..215
None	No IPR available	PROSITE	PS51419	RAB	coord: 8..214 score: 35.419
None	No IPR available	CDD	cd01868	Rab11_like	coord: 10..174 e-value: 2.27172E-125 score: 353.403
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 11..169 e-value: 1.3E-39 score: 133.6
IPR001806	Small GTPase superfamily	PFAM	PF00071	Ras	coord: 14..173 e-value: 1.3E-60 score: 203.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 8..178

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg02103	Cla006558	Watermelon (97103) v1	carwmB0261
Carg02103	Csa6G008830	Cucumber (Chinese Long) v2	carcuB0297
Carg02103	MELO3C008250	Melon (DHL92) v3.5.1	carmeB0267
Carg02103	ClCG11G006540	Watermelon (Charleston Gray)	carwcgB0255
Carg02103	CSPI06G01330	Wild cucumber (PI 183967)	carcpiB0301
Carg02103	Cucsa.136310	Cucumber (Gy14) v1	carcgyB0307
Carg02103	CmaCh15G001120	Cucurbita maxima (Rimu)	carcmaB0362
Carg02103	CmaCh04G029340	Cucurbita maxima (Rimu)	carcmaB0374
Carg02103	CmoCh04G030570	Cucurbita moschata (Rifu)	carcmoB0370
Carg02103	Lsi03G003460	Bottle gourd (USVL1VR-Ls)	carlsiB236
Carg02103	Cp4.1LG01g25400	Cucurbita pepo (Zucchini)	carcpeB0374
Carg02103	CsGy6G001380	Cucumber (Gy14) v2	carcgybB0284
Carg02103	MELO3C008250.2	Melon (DHL92) v3.6.1	carmedB0278
Carg02103	CsaV3_6G001460	Cucumber (Chinese Long) v3	carcucB0300
Carg02103	Cla97C11G213500	Watermelon (97103) v2	carwmbB0269
Carg02103	Bhi04G001931	Wax gourd	carwgoB0349

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg02103	Carg06007	Silver-seed gourd	carcarB020

The following block(s) are covering this gene:


Gene	Organism	Block
Carg02103	Wild cucumber (PI 183967)	carcpiB0293
Carg02103	Silver-seed gourd	carcarB096
Carg02103	Silver-seed gourd	carcarB183
Carg02103	Silver-seed gourd	carcarB302
Carg02103	Silver-seed gourd	carcarB304
Carg02103	Silver-seed gourd	carcarB311
Carg02103	Cucumber (Gy14) v2	carcgybB0276
Carg02103	Cucumber (Gy14) v2	carcgybB0279
Carg02103	Cucumber (Gy14) v1	carcgyB0313
Carg02103	Cucurbita maxima (Rimu)	carcmaB0361
Carg02103	Cucurbita maxima (Rimu)	carcmaB0375
Carg02103	Cucurbita maxima (Rimu)	carcmaB0376
Carg02103	Cucurbita moschata (Rifu)	carcmoB0361
Carg02103	Cucurbita moschata (Rifu)	carcmoB0362
Carg02103	Cucurbita moschata (Rifu)	carcmoB0371
Carg02103	Cucurbita moschata (Rifu)	carcmoB0372
Carg02103	Cucurbita pepo (Zucchini)	carcpeB0366
Carg02103	Cucurbita pepo (Zucchini)	carcpeB0375
Carg02103	Cucurbita pepo (Zucchini)	carcpeB0376
Carg02103	Cucurbita pepo (Zucchini)	carcpeB0379
Carg02103	Wild cucumber (PI 183967)	carcpiB0296
Carg02103	Cucumber (Chinese Long) v2	carcuB0292
Carg02103	Cucumber (Chinese Long) v2	carcuB0289
Carg02103	Cucumber (Chinese Long) v3	carcucB0292
Carg02103	Cucumber (Chinese Long) v3	carcucB0295
Carg02103	Bottle gourd (USVL1VR-Ls)	carlsiB239
Carg02103	Melon (DHL92) v3.5.1	carmeB0271
Carg02103	Melon (DHL92) v3.6.1	carmedB0282
Carg02103	Watermelon (Charleston Gray)	carwcgB0250
Carg02103	Watermelon (Charleston Gray)	carwcgB0259
Carg02103	Watermelon (97103) v1	carwmB0247
Carg02103	Watermelon (97103) v1	carwmB0258
Carg02103	Watermelon (97103) v2	carwmbB0264
Carg02103	Watermelon (97103) v2	carwmbB0275