Carg02086 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg02086
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Peptidylprolyl isomerase
Location	Cucurbita_argyrosperma_scaffold_007 : 12512 .. 14053 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGATACGATAGACTTAACCGGGAATGGAGGTGTTGTGAAGACAATCGTAAGGCATGCCAAAGCCAATGCTGATGCTCCAACCGATGACCTTCCTCTTGTTGATGGTACATTTTTTAAAGCAAAATTATGGTTTACTTCTTCACTGACATTACATTGCAAACTACTGAGACTGATAGTATATGAGTAAAATTCAAGAGGAAGACTTGAACGAGTTACCTTTGAGCCTTGGTTACATACTGTTTCTGCCTGCATTTAAGGTAGTCAATGAATAGATAGAAACTTCCTTCCCTGTTTGTCATTTGAGTTCTTTTCTTGGTTACATATTGTTTCGTCTCATGAATTTGAACTGTTTGATTAGTCACCTGACTGTTTAGTCATGTTTCATTCCCACTGCTGCTTTCTGGTTTATTTGTGATTGACGTTCCCATGAGTTAGAATATACAACTTATTAACCTTCCTCTCAGACTTTTAACAAATCCCCCTTCATCCCATTCTGCCATCTTCACATTTGTTTTTGAATTACCCTTGATCGTAAATTCTTAAAGCTTTTTGTTCCTCCAAAAAGTTCTATTAACTTTTGCCATATGTTGAGTGGAGCAGTACAGTATGAAGGAGTTCTCGCTGAATCTGGCGAAGTATTTGATTCTACTCGTGAGGATAATACCATTTTCTCTTTTGAGCTTGGAAAAGGATCCGTGATCCAGGCTTGGGAAATTGCTGTCAAGACAATGAAGGTAAGAAAAAAAAAACAAGCTTTCCATCAGAAAGATATGCAGCATGTTGTGCTGTTTTTTTTTTTTTTCTTCTGAATACTGTTCTGTTGGATTGTTCCAACAGGTCGGTGAGGTTGCTAAAATCACTTGCAAGCCTGAATATGCTTATGGAAGTGCTGGTTCTCCACCAGACATCCCACCAAAGTAATGTCTTTACTCTTTCTTCTTTCTCTTGTGATAAACGAGACACCGGATTTGGTAATGCCTTTATGATAATGTCTCAAATTCATTTTAGTACAAACGATTACTGTCAATAATAGTATTCTGCATTGGCTTGGACCGGACCTTCCAGCCCCTTTTTCACTTGGAAATTTTGCTCATGAAGTATGTCGGCCATTGCAAGTGCAATGGATTCTCCTATTCAAATGCCTCATGTATATGTGCACCCCAATTTTAGGTGATAAATTCATAAATTCATAAGCCACTGTCTTACTCTCTTGCAGTGCAACTCTTATTTTCGAGGTGGAACTAGTGGCCTGCAAGCCACGGAAAGGCTCAAGTCTAGGCAGTGTTTCGGAGGAAAGGGCCAGGCTCGAGTAAGTAATCCACTACTTCAACGATCCACCTTTTTCATATTGGCCATAATGATTTGTTTTTTACAACATTGTTGAATCAGAGAATTGAAAAGGCAAAGGGAGGCTACTGCTGCAATAAAAGAGGAGGAGAAAAAGAAGAGAGACGAAGCCAAAGCAGCGGCAGCTGCCCGCATTCAAGCCAAGTTAGATGCCAAAAAGGGTGGAAAGGGAAAGAACAAAGCAAAATAA

mRNA sequence

ATGGGTGATACGATAGACTTAACCGGGAATGGAGGTGTTGTGAAGACAATCGTAAGGCATGCCAAAGCCAATGCTGATGCTCCAACCGATGACCTTCCTCTTGTTGATGTACAGTATGAAGGAGTTCTCGCTGAATCTGGCGAAGTATTTGATTCTACTCGTGAGGATAATACCATTTTCTCTTTTGAGCTTGGAAAAGGATCCGTGATCCAGGCTTGGGAAATTGCTGTCAAGACAATGAAGGTCGGTGAGGTTGCTAAAATCACTTGCAAGCCTGAATATGCTTATGGAAGTGCTGGTTCTCCACCAGACATCCCACCAAATGCAACTCTTATTTTCGAGGTGGAACTAGTGGCCTGCAAGCCACGGAAAGGCTCAAGTCTAGGCAGTGTTTCGGAGGAAAGGGCCAGGCTCGAAGAATTGAAAAGGCAAAGGGAGGCTACTGCTGCAATAAAAGAGGAGGAGAAAAAGAAGAGAGACGAAGCCAAAGCAGCGGCAGCTGCCCGCATTCAAGCCAAGTTAGATGCCAAAAAGGGTGGAAAGGGAAAGAACAAAGCAAAATAA

Coding sequence (CDS)

ATGGGTGATACGATAGACTTAACCGGGAATGGAGGTGTTGTGAAGACAATCGTAAGGCATGCCAAAGCCAATGCTGATGCTCCAACCGATGACCTTCCTCTTGTTGATGTACAGTATGAAGGAGTTCTCGCTGAATCTGGCGAAGTATTTGATTCTACTCGTGAGGATAATACCATTTTCTCTTTTGAGCTTGGAAAAGGATCCGTGATCCAGGCTTGGGAAATTGCTGTCAAGACAATGAAGGTCGGTGAGGTTGCTAAAATCACTTGCAAGCCTGAATATGCTTATGGAAGTGCTGGTTCTCCACCAGACATCCCACCAAATGCAACTCTTATTTTCGAGGTGGAACTAGTGGCCTGCAAGCCACGGAAAGGCTCAAGTCTAGGCAGTGTTTCGGAGGAAAGGGCCAGGCTCGAAGAATTGAAAAGGCAAAGGGAGGCTACTGCTGCAATAAAAGAGGAGGAGAAAAAGAAGAGAGACGAAGCCAAAGCAGCGGCAGCTGCCCGCATTCAAGCCAAGTTAGATGCCAAAAAGGGTGGAAAGGGAAAGAACAAAGCAAAATAA

Protein sequence

MGDTIDLTGNGGVVKTIVRHAKANADAPTDDLPLVDVQYEGVLAESGEVFDSTREDNTIFSFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPPNATLIFEVELVACKPRKGSSLGSVSEERARLEELKRQREATAAIKEEEKKKRDEAKAAAAARIQAKLDAKKGGKGKNKAK

Homology

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BLAST of Carg02086 vs. NCBI nr
Match: XP_023551050.1 (peptidyl-prolyl cis-trans isomerase FKBP20-1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 310.1 bits (793), Expect = 5.2e-81
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 1   MGDTIDLTGNGGVVKTIVRHAKANADAPTDDLPLVDVQYEGVLAESGEVFDSTREDNTIF 60
           MGDTIDLTGNGGVVKTIVRHAKANADAPTDDLPLVDVQYEGVLAESGEVFDSTREDNTIF
Sbjct: 1   MGDTIDLTGNGGVVKTIVRHAKANADAPTDDLPLVDVQYEGVLAESGEVFDSTREDNTIF 60

Query: 61  SFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPPNATLIFEVELVAC 120
           SFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPPNATLIFEVELVAC
Sbjct: 61  SFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPPNATLIFEVELVAC 120

Query: 121 KPRKGSSLGSVSEERARLEELKRQXXXXXXXXXXXXXXXXXXXXXXXXXIQAKLDAKKGG 180
           KPRKGSSLGSVSEERARLEELKRQXXXXXXXXXXXXXXXXXXXXXXXXXIQAKLDAKKGG
Sbjct: 121 KPRKGSSLGSVSEERARLEELKRQXXXXXXXXXXXXXXXXXXXXXXXXXIQAKLDAKKGG 180

Query: 181 KGKNKAK 188
           KGKNKAK
Sbjct: 181 KGKNKAK 187

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BLAST of Carg02086 vs. NCBI nr
Match: XP_022938681.1 (peptidyl-prolyl cis-trans isomerase FKBP20-1 [Cucurbita moschata] >XP_022938682.1 peptidyl-prolyl cis-trans isomerase FKBP20-1 [Cucurbita moschata])

HSP 1 Score: 309.7 bits (792), Expect = 6.8e-81
Identity = 186/187 (99.47%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 1   MGDTIDLTGNGGVVKTIVRHAKANADAPTDDLPLVDVQYEGVLAESGEVFDSTREDNTIF 60
           MGDT+DLTGNGGVVKTIVRHAKANADAPTDDLPLVDVQYEGVLAESGEVFDSTREDNTIF
Sbjct: 1   MGDTVDLTGNGGVVKTIVRHAKANADAPTDDLPLVDVQYEGVLAESGEVFDSTREDNTIF 60

Query: 61  SFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPPNATLIFEVELVAC 120
           SFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPPNATLIFEVELVAC
Sbjct: 61  SFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPPNATLIFEVELVAC 120

Query: 121 KPRKGSSLGSVSEERARLEELKRQXXXXXXXXXXXXXXXXXXXXXXXXXIQAKLDAKKGG 180
           KPRKGSSLGSVSEERARLEELKRQXXXXXXXXXXXXXXXXXXXXXXXXXIQAKLDAKKGG
Sbjct: 121 KPRKGSSLGSVSEERARLEELKRQXXXXXXXXXXXXXXXXXXXXXXXXXIQAKLDAKKGG 180

Query: 181 KGKNKAK 188
           KGKNKAK
Sbjct: 181 KGKNKAK 187

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BLAST of Carg02086 vs. NCBI nr
Match: XP_022992626.1 (peptidyl-prolyl cis-trans isomerase FKBP20-1 [Cucurbita maxima] >XP_022992627.1 peptidyl-prolyl cis-trans isomerase FKBP20-1 [Cucurbita maxima])

HSP 1 Score: 304.3 bits (778), Expect = 2.9e-79
Identity = 184/187 (98.40%), Postives = 185/187 (98.93%), Query Frame = 0


Query: 1   MGDTIDLTGNGGVVKTIVRHAKANADAPTDDLPLVDVQYEGVLAESGEVFDSTREDNTIF 60
           MGDT+DLTGNGGVVKTIVRHAKANADAPTDDLPLVDV YEGVLAESGEVFDSTREDNTIF
Sbjct: 1   MGDTVDLTGNGGVVKTIVRHAKANADAPTDDLPLVDVHYEGVLAESGEVFDSTREDNTIF 60

Query: 61  SFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPPNATLIFEVELVAC 120
           SFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPPNATLIFEVELVAC
Sbjct: 61  SFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPPNATLIFEVELVAC 120

Query: 121 KPRKGSSLGSVSEERARLEELKRQXXXXXXXXXXXXXXXXXXXXXXXXXIQAKLDAKKGG 180
           KPRKGSSLGSVSEERARLEELKRQXXXXXXXXXXXXXXXXXXXXXXXXXIQAKLDAKK G
Sbjct: 121 KPRKGSSLGSVSEERARLEELKRQXXXXXXXXXXXXXXXXXXXXXXXXXIQAKLDAKKCG 180

Query: 181 KGKNKAK 188
           KGKNKAK
Sbjct: 181 KGKNKAK 187

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BLAST of Carg02086 vs. NCBI nr
Match: XP_008441376.1 (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP20-1 [Cucumis melo] >XP_008441377.1 PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP20-1 [Cucumis melo] >XP_008441378.1 PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP20-1 [Cucumis melo] >XP_008441379.1 PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP20-1 [Cucumis melo] >ADN34068.1 fk506 binding protein [Cucumis melo subsp. melo])

HSP 1 Score: 275.8 bits (704), Expect = 1.1e-70
Identity = 168/187 (89.84%), Postives = 175/187 (93.58%), Query Frame = 0


Query: 1   MGDTIDLTGNGGVVKTIVRHAKANADAPTDDLPLVDVQYEGVLAESGEVFDSTREDNTIF 60
           MGDTIDLTGNGGV+KTIV+HAKA+AD PTDDLPLVDV YEG LAESG VFDSTREDNT+F
Sbjct: 1   MGDTIDLTGNGGVLKTIVKHAKADADGPTDDLPLVDVHYEGTLAESGVVFDSTREDNTVF 60

Query: 61  SFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPPNATLIFEVELVAC 120
           SFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYG AGSPPDIPP ATLIFEVELVAC
Sbjct: 61  SFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYGVAGSPPDIPPEATLIFEVELVAC 120

Query: 121 KPRKGSSLGSVSEERARLEELKRQXXXXXXXXXXXXXXXXXXXXXXXXXIQAKLDAKKGG 180
           KPRKGSSLGSVSEERARLEELKR XXXXXXXXXXXXXXXXXXXXXXXXX     ++KKGG
Sbjct: 121 KPRKGSSLGSVSEERARLEELKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESKKGG 180

Query: 181 KGKNKAK 188
           KGK+KAK
Sbjct: 181 KGKSKAK 187

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BLAST of Carg02086 vs. NCBI nr
Match: XP_022133782.1 (peptidyl-prolyl cis-trans isomerase FKBP20-1 [Momordica charantia] >XP_022133783.1 peptidyl-prolyl cis-trans isomerase FKBP20-1 [Momordica charantia] >XP_022133784.1 peptidyl-prolyl cis-trans isomerase FKBP20-1 [Momordica charantia] >XP_022133785.1 peptidyl-prolyl cis-trans isomerase FKBP20-1 [Momordica charantia])

HSP 1 Score: 274.6 bits (701), Expect = 2.4e-70
Identity = 135/142 (95.07%), Postives = 139/142 (97.89%), Query Frame = 0


Query: 1   MGDTIDLTGNGGVVKTIVRHAKANADAPTDDLPLVDVQYEGVLAESGEVFDSTREDNTIF 60
           MGDT+DLTGNGGVVKTIVRHAKANADAPTDDLPLVDV YEG LAESGEVFDST EDNT+F
Sbjct: 1   MGDTVDLTGNGGVVKTIVRHAKANADAPTDDLPLVDVHYEGTLAESGEVFDSTLEDNTVF 60

Query: 61  SFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPPNATLIFEVELVAC 120
           SFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPP+ATL+FEVELVAC
Sbjct: 61  SFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPPDATLVFEVELVAC 120

Query: 121 KPRKGSSLGSVSEERARLEELK 143
           KPRKGSSLGSVSEERARLEELK
Sbjct: 121 KPRKGSSLGSVSEERARLEELK 142

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BLAST of Carg02086 vs. TAIR10
Match: AT3G55520.1 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein)

HSP 1 Score: 232.6 bits (592), Expect = 1.9e-61
Identity = 111/143 (77.62%), Postives = 132/143 (92.31%), Query Frame = 0


Query: 1   MGDTIDLTGNGGVVKTIVRHAKANADAPTDDLPLVDVQYEGVLAESGEVFDSTREDNTIF 60
           MGD IDL+G+GGV+K IVR AK +A +P+DDLP+VDV YEG+LAE  +VFD+TREDN +F
Sbjct: 1   MGDAIDLSGDGGVLKKIVRSAKPDAISPSDDLPVVDVHYEGILAEDEKVFDTTREDNLVF 60

Query: 61  SFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPPNATLIFEVELVAC 120
           SFELG GSVI++W+IA+KTMKVGEVAKITCKPEYAYG AGSPPDIPP+ATLIFEVELVAC
Sbjct: 61  SFELGTGSVIRSWDIALKTMKVGEVAKITCKPEYAYGRAGSPPDIPPDATLIFEVELVAC 120

Query: 121 KPRKGSSLGSVSEERARLEELKR 144
           +PRKG+S+GSVSEERARLE+LK+
Sbjct: 121 RPRKGASVGSVSEERARLEDLKK 143

[Close]

BLAST of Carg02086 vs. TAIR10
Match: AT5G48570.1 (FKBP-type peptidyl-prolyl cis-trans isomerase family protein)

HSP 1 Score: 99.8 bits (247), Expect = 1.9e-21
Identity = 56/124 (45.16%), Postives = 79/124 (63.71%), Query Frame = 0


Query: 1   MGDTIDLTGNGGVVKTIVRHAKANADAPTDDLPLVDVQYEGVLAESGEVFDSTREDNTIF 60
           +G+ +++ G  G+ K +V+  +   D P ++   V+V Y G L + G  FDS+R+  T F
Sbjct: 37  IGEEMEI-GKSGLKKKLVKECE-KWDTP-ENGDEVEVHYTGTLLD-GTKFDSSRDRGTPF 96

Query: 61  SFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPPNATLIFEVELVAC 120
            F LG+G VI+ W++ +KTMK GE A  T  PE AYG  GSPP IPPNATL F+VEL+A 
Sbjct: 97  KFTLGQGHVIKGWDLGIKTMKKGENAIFTIPPELAYGETGSPPTIPPNATLQFDVELIAW 156

Query: 121 KPRK 125
           +  K
Sbjct: 157 RSVK 156

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BLAST of Carg02086 vs. TAIR10
Match: AT3G25230.2 (rotamase FKBP 1)

HSP 1 Score: 90.1 bits (222), Expect = 1.5e-18
Identity = 46/84 (54.76%), Postives = 57/84 (67.86%), Query Frame = 0


Query: 35  VDVQYEGVLAESGEVFDSTREDNTIFSFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEY 94
           V+V Y G L + G  FDS+R+  T F F LG+G VI+ W+I +KTMK GE A  T   E 
Sbjct: 60  VEVHYTGTLLD-GTKFDSSRDRATPFKFTLGQGQVIKGWDIGIKTMKKGENAVFTIPAEL 119

Query: 95  AYGSAGSPPDIPPNATLIFEVELV 119
           AYG +GSPP IP NATL F+VEL+
Sbjct: 120 AYGESGSPPTIPANATLQFDVELL 142

[Close]

BLAST of Carg02086 vs. TAIR10
Match: AT4G25340.1 (FK506 BINDING PROTEIN 53)

HSP 1 Score: 74.7 bits (182), Expect = 6.7e-14
Identity = 37/84 (44.05%), Postives = 53/84 (63.10%), Query Frame = 0


Query: 35  VDVQYEGVLAESGEVFDSTREDNTIFSFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEY 94
           V V+Y G L ++G++FDS     + F F LG GSVI+ W++ V  M+VG+  K+T  P  
Sbjct: 392 VSVRYIGKLQKNGKIFDS-NIGKSPFKFRLGIGSVIKGWDVGVNGMRVGDKRKLTIPPSM 451

Query: 95  AYGSAGSPPDIPPNATLIFEVELV 119
            YG  G+   IPPN+ L F+VEL+
Sbjct: 452 GYGVKGAGGQIPPNSWLTFDVELI 474

[Close]

BLAST of Carg02086 vs. TAIR10
Match: AT5G48580.1 (FK506- and rapamycin-binding protein 15 kD-2)

HSP 1 Score: 74.7 bits (182), Expect = 6.7e-14
Identity = 42/102 (41.18%), Postives = 55/102 (53.92%), Query Frame = 0


Query: 35  VDVQYEGVLAESGEVFDSTREDNTIFSFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEY 94
           + V Y G L + G VFDS+ E    F F+LG G VI+ W+  +    VGE  K+    + 
Sbjct: 55  IKVHYRGKLTD-GTVFDSSFERGDPFEFKLGSGQVIKGWDQGLLGACVGEKRKLKIPAKL 114

Query: 95  AYGSAGSPPDIPPNATLIFEVELVAC--KPRKGSSLGSVSEE 135
            YG  GSPP IP  ATLIF+ EL+A   KP  G   G   ++
Sbjct: 115 GYGEQGSPPTIPGGATLIFDTELIAVNEKPAGGEEYGGDEDD 155

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BLAST of Carg02086 vs. Swiss-Prot
Match: sp|Q9M2S7|FK201_ARATH (Peptidyl-prolyl cis-trans isomerase FKBP20-1 OS=Arabidopsis thaliana OX=3702 GN=FKBP20-1 PE=1 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 3.5e-60
Identity = 111/143 (77.62%), Postives = 132/143 (92.31%), Query Frame = 0


Query: 1   MGDTIDLTGNGGVVKTIVRHAKANADAPTDDLPLVDVQYEGVLAESGEVFDSTREDNTIF 60
           MGD IDL+G+GGV+K IVR AK +A +P+DDLP+VDV YEG+LAE  +VFD+TREDN +F
Sbjct: 1   MGDAIDLSGDGGVLKKIVRSAKPDAISPSDDLPVVDVHYEGILAEDEKVFDTTREDNLVF 60

Query: 61  SFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPPNATLIFEVELVAC 120
           SFELG GSVI++W+IA+KTMKVGEVAKITCKPEYAYG AGSPPDIPP+ATLIFEVELVAC
Sbjct: 61  SFELGTGSVIRSWDIALKTMKVGEVAKITCKPEYAYGRAGSPPDIPPDATLIFEVELVAC 120

Query: 121 KPRKGSSLGSVSEERARLEELKR 144
           +PRKG+S+GSVSEERARLE+LK+
Sbjct: 121 RPRKGASVGSVSEERARLEDLKK 143

[Close]

BLAST of Carg02086 vs. Swiss-Prot
Match: sp|Q9QVC8|FKBP4_RAT (Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Rattus norvegicus OX=10116 GN=Fkbp4 PE=1 SV=3)

HSP 1 Score: 119.8 bits (299), Expect = 3.3e-26
Identity = 66/110 (60.00%), Postives = 74/110 (67.27%), Query Frame = 0


Query: 12  GVVKTIVRHAKANADAPTDDLPLVDVQYEGVLAESGEVFDSTREDNTIFSFELGKGSVIQ 71
           GV+K I R       A   D   V V Y G L + G  FDS+ +    FSF+LGKG VI+
Sbjct: 32  GVLKVIKREGTGTETAMIGD--RVFVHYTGWLLD-GTKFDSSLDRKDKFSFDLGKGEVIK 91

Query: 72  AWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPPNATLIFEVELVACK 122
           AW+IAV TMKVGEV  ITCKPEYAYGSAGSPP IPPNATL+FEVEL   K
Sbjct: 92  AWDIAVATMKVGEVCHITCKPEYAYGSAGSPPKIPPNATLVFEVELFEFK 138

[Close]

BLAST of Carg02086 vs. Swiss-Prot
Match: sp|P27124|FKBP4_RABIT (Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Oryctolagus cuniculus OX=9986 GN=FKBP4 PE=1 SV=3)

HSP 1 Score: 117.9 bits (294), Expect = 1.2e-25
Identity = 64/110 (58.18%), Postives = 74/110 (67.27%), Query Frame = 0


Query: 12  GVVKTIVRHAKANADAPTDDLPLVDVQYEGVLAESGEVFDSTREDNTIFSFELGKGSVIQ 71
           GV+K I R           D   V V Y G L + G  FDS+ +    FSF+LGKG VI+
Sbjct: 32  GVLKVIKREGTGTETPMIGD--RVFVHYTGWLLD-GTKFDSSLDRKDKFSFDLGKGEVIK 91

Query: 72  AWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPPNATLIFEVELVACK 122
           AW+IAV TMKVGE+ +ITCKPEYAYGSAGSPP IPPNATL+FEVEL   K
Sbjct: 92  AWDIAVATMKVGELCRITCKPEYAYGSAGSPPKIPPNATLVFEVELFEFK 138

[Close]

BLAST of Carg02086 vs. Swiss-Prot
Match: sp|Q02790|FKBP4_HUMAN (Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Homo sapiens OX=9606 GN=FKBP4 PE=1 SV=3)

HSP 1 Score: 116.7 bits (291), Expect = 2.8e-25
Identity = 64/110 (58.18%), Postives = 73/110 (66.36%), Query Frame = 0


Query: 12  GVVKTIVRHAKANADAPTDDLPLVDVQYEGVLAESGEVFDSTREDNTIFSFELGKGSVIQ 71
           GV+K I R           D   V V Y G L + G  FDS+ +    FSF+LGKG VI+
Sbjct: 32  GVLKVIKREGTGTEMPMIGD--RVFVHYTGWLLD-GTKFDSSLDRKDKFSFDLGKGEVIK 91

Query: 72  AWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPPNATLIFEVELVACK 122
           AW+IA+ TMKVGEV  ITCKPEYAYGSAGSPP IPPNATL+FEVEL   K
Sbjct: 92  AWDIAIATMKVGEVCHITCKPEYAYGSAGSPPKIPPNATLVFEVELFEFK 138

[Close]

BLAST of Carg02086 vs. Swiss-Prot
Match: sp|P30416|FKBP4_MOUSE (Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Mus musculus OX=10090 GN=Fkbp4 PE=1 SV=5)

HSP 1 Score: 116.7 bits (291), Expect = 2.8e-25
Identity = 64/110 (58.18%), Postives = 73/110 (66.36%), Query Frame = 0


Query: 12  GVVKTIVRHAKANADAPTDDLPLVDVQYEGVLAESGEVFDSTREDNTIFSFELGKGSVIQ 71
           GV+K I R           D   V V Y G L + G  FDS+ +    FSF+LGKG VI+
Sbjct: 32  GVLKVIKREGTGTETPMIGD--RVFVHYTGWLLD-GTKFDSSLDRKDKFSFDLGKGEVIK 91

Query: 72  AWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPPNATLIFEVELVACK 122
           AW+IAV TMKVGEV  ITCKPEYAYG+AGSPP IPPNATL+FEVEL   K
Sbjct: 92  AWDIAVATMKVGEVCHITCKPEYAYGAAGSPPKIPPNATLVFEVELFEFK 138

[Close]

BLAST of Carg02086 vs. TrEMBL
Match: tr|A0A1S3B417|A0A1S3B417_CUCME (Peptidylprolyl isomerase OS=Cucumis melo OX=3656 GN=LOC103485510 PE=4 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 7.2e-71
Identity = 168/187 (89.84%), Postives = 175/187 (93.58%), Query Frame = 0


Query: 1   MGDTIDLTGNGGVVKTIVRHAKANADAPTDDLPLVDVQYEGVLAESGEVFDSTREDNTIF 60
           MGDTIDLTGNGGV+KTIV+HAKA+AD PTDDLPLVDV YEG LAESG VFDSTREDNT+F
Sbjct: 1   MGDTIDLTGNGGVLKTIVKHAKADADGPTDDLPLVDVHYEGTLAESGVVFDSTREDNTVF 60

Query: 61  SFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPPNATLIFEVELVAC 120
           SFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYG AGSPPDIPP ATLIFEVELVAC
Sbjct: 61  SFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYGVAGSPPDIPPEATLIFEVELVAC 120

Query: 121 KPRKGSSLGSVSEERARLEELKRQXXXXXXXXXXXXXXXXXXXXXXXXXIQAKLDAKKGG 180
           KPRKGSSLGSVSEERARLEELKR XXXXXXXXXXXXXXXXXXXXXXXXX     ++KKGG
Sbjct: 121 KPRKGSSLGSVSEERARLEELKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESKKGG 180

Query: 181 KGKNKAK 188
           KGK+KAK
Sbjct: 181 KGKSKAK 187

[Close]

BLAST of Carg02086 vs. TrEMBL
Match: tr|E5GC69|E5GC69_CUCME (Peptidylprolyl isomerase OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 7.2e-71
Identity = 168/187 (89.84%), Postives = 175/187 (93.58%), Query Frame = 0


Query: 1   MGDTIDLTGNGGVVKTIVRHAKANADAPTDDLPLVDVQYEGVLAESGEVFDSTREDNTIF 60
           MGDTIDLTGNGGV+KTIV+HAKA+AD PTDDLPLVDV YEG LAESG VFDSTREDNT+F
Sbjct: 1   MGDTIDLTGNGGVLKTIVKHAKADADGPTDDLPLVDVHYEGTLAESGVVFDSTREDNTVF 60

Query: 61  SFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPPNATLIFEVELVAC 120
           SFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYG AGSPPDIPP ATLIFEVELVAC
Sbjct: 61  SFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYGVAGSPPDIPPEATLIFEVELVAC 120

Query: 121 KPRKGSSLGSVSEERARLEELKRQXXXXXXXXXXXXXXXXXXXXXXXXXIQAKLDAKKGG 180
           KPRKGSSLGSVSEERARLEELKR XXXXXXXXXXXXXXXXXXXXXXXXX     ++KKGG
Sbjct: 121 KPRKGSSLGSVSEERARLEELKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESKKGG 180

Query: 181 KGKNKAK 188
           KGK+KAK
Sbjct: 181 KGKSKAK 187

[Close]

BLAST of Carg02086 vs. TrEMBL
Match: tr|A0A0A0KD69|A0A0A0KD69_CUCSA (Peptidylprolyl isomerase OS=Cucumis sativus OX=3659 GN=Csa_6G008620 PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 1.8e-69
Identity = 134/143 (93.71%), Postives = 139/143 (97.20%), Query Frame = 0


Query: 1   MGDTIDLTGNGGVVKTIVRHAKANADAPTDDLPLVDVQYEGVLAESGEVFDSTREDNTIF 60
           M +TIDLTGNGGV+KTIV+HAKANADAPTDDLPLVDV YEG LAESGEVFDSTREDNT+F
Sbjct: 1   MSETIDLTGNGGVLKTIVKHAKANADAPTDDLPLVDVHYEGTLAESGEVFDSTREDNTVF 60

Query: 61  SFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPPNATLIFEVELVAC 120
           SFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYG AGSPPDIPP+ATLIFEVELVAC
Sbjct: 61  SFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYGVAGSPPDIPPDATLIFEVELVAC 120

Query: 121 KPRKGSSLGSVSEERARLEELKR 144
           KPRKGSSLGSVSEERARLEELKR
Sbjct: 121 KPRKGSSLGSVSEERARLEELKR 143

[Close]

BLAST of Carg02086 vs. TrEMBL
Match: tr|A0A2P4KSX4|A0A2P4KSX4_QUESU (Peptidylprolyl isomerase OS=Quercus suber OX=58331 GN=CFP56_58650 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 4.1e-66
Identity = 156/178 (87.64%), Postives = 171/178 (96.07%), Query Frame = 0


Query: 1   MGDTIDLTGNGGVVKTIVRHAKANADAPTDDLPLVDVQYEGVLAESGEVFDSTREDNTIF 60
           MGD IDLTG+GGV+KTIVR AKANA AP DDLPLVDV YEG+LAE+GEVFD+TREDNT+F
Sbjct: 1   MGDAIDLTGDGGVLKTIVRQAKANAIAPKDDLPLVDVHYEGILAENGEVFDTTREDNTVF 60

Query: 61  SFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPPNATLIFEVELVAC 120
           SFE+GKG+VI+AW+IA+KTMKVGEVAKITC PEYAYGSAGSPPDIPPNATLIFEVELVAC
Sbjct: 61  SFEVGKGTVIKAWDIALKTMKVGEVAKITCMPEYAYGSAGSPPDIPPNATLIFEVELVAC 120

Query: 121 KPRKGSSLGSVSEERARLEELKRQXXXXXXXXXXXXXXXXXXXXXXXXXIQAKLDAKK 179
           +PRKGSSLGSVSEERARLEELKR XXXXXXXXXXXXXXXXXXXXXXXXX+QAKL++KK
Sbjct: 121 RPRKGSSLGSVSEERARLEELKRXXXXXXXXXXXXXXXXXXXXXXXXXXVQAKLESKK 178

[Close]

BLAST of Carg02086 vs. TrEMBL
Match: tr|A0A1U8A661|A0A1U8A661_NELNU (Peptidylprolyl isomerase OS=Nelumbo nucifera OX=4432 GN=LOC104597153 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 3.5e-65
Identity = 156/188 (82.98%), Postives = 177/188 (94.15%), Query Frame = 0


Query: 1   MGDTIDLTGNGGVVKTIVRHAKANADAPTDDLPLVDVQYEGVLAESGEVFDSTREDNTIF 60
           MGD +DLTG+GGV+KTIVR AKA+A APT++LPLVDV YEGVLAE+GEVFD+T EDNTIF
Sbjct: 1   MGDLVDLTGDGGVIKTIVRRAKADAVAPTENLPLVDVHYEGVLAETGEVFDTTHEDNTIF 60

Query: 61  SFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPPNATLIFEVELVAC 120
           SFELGKG+VI+AW+IA++TMKVGEVAKITCKP+YAYG+AGS PDIPPNATL+FE+ELVAC
Sbjct: 61  SFELGKGTVIKAWDIALRTMKVGEVAKITCKPDYAYGNAGSAPDIPPNATLVFEIELVAC 120

Query: 121 KPRKGSSLGSVSEERARLEELKRQXXXXXXXXXXXXXXXXXXXXXXXXXIQAKLDAKKG- 180
           +PRKGSSLGSVS+ERARLEELK  XXXXXXXXXXXXXXXXXXXXXXXXX+QAKLDAKK  
Sbjct: 121 RPRKGSSLGSVSDERARLEELKXXXXXXXXXXXXXXXXXXXXXXXXXXXVQAKLDAKKAQ 180

Query: 181 GKGKNKAK 188
           G+GK KAK
Sbjct: 181 GRGKGKAK 188

The following BLAST results are available for this feature:

BLAST of Carg02086 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023551050.1	5.2e-81	100.00	peptidyl-prolyl cis-trans isomerase FKBP20-1 [Cucurbita pepo subsp. pepo]	[more]
XP_022938681.1	6.8e-81	99.47	peptidyl-prolyl cis-trans isomerase FKBP20-1 [Cucurbita moschata] >XP_022938682....	[more]
XP_022992626.1	2.9e-79	98.40	peptidyl-prolyl cis-trans isomerase FKBP20-1 [Cucurbita maxima] >XP_022992627.1 ...	[more]
XP_008441376.1	1.1e-70	89.84	PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP20-1 [Cucumis melo] >XP_00844...	[more]
XP_022133782.1	2.4e-70	95.07	peptidyl-prolyl cis-trans isomerase FKBP20-1 [Momordica charantia] >XP_022133783...	[more]

BLAST of Carg02086 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G55520.1	1.9e-61	77.62	FKBP-like peptidyl-prolyl cis-trans isomerase family protein	[more]
AT5G48570.1	1.9e-21	45.16	FKBP-type peptidyl-prolyl cis-trans isomerase family protein	[more]
AT3G25230.2	1.5e-18	54.76	rotamase FKBP 1	[more]
AT4G25340.1	6.7e-14	44.05	FK506 BINDING PROTEIN 53	[more]
AT5G48580.1	6.7e-14	41.18	FK506- and rapamycin-binding protein 15 kD-2	[more]

BLAST of Carg02086 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9M2S7\|FK201_ARATH	3.5e-60	77.62	Peptidyl-prolyl cis-trans isomerase FKBP20-1 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
sp\|Q9QVC8\|FKBP4_RAT	3.3e-26	60.00	Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Rattus norvegicus OX=10116 GN=Fkbp4...	[more]
sp\|P27124\|FKBP4_RABIT	1.2e-25	58.18	Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Oryctolagus cuniculus OX=9986 GN=FK...	[more]
sp\|Q02790\|FKBP4_HUMAN	2.8e-25	58.18	Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Homo sapiens OX=9606 GN=FKBP4 PE=1 ...	[more]
sp\|P30416\|FKBP4_MOUSE	2.8e-25	58.18	Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Mus musculus OX=10090 GN=Fkbp4 PE=1...	[more]

BLAST of Carg02086 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B417\|A0A1S3B417_CUCME	7.2e-71	89.84	Peptidylprolyl isomerase OS=Cucumis melo OX=3656 GN=LOC103485510 PE=4 SV=1	[more]
tr\|E5GC69\|E5GC69_CUCME	7.2e-71	89.84	Peptidylprolyl isomerase OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|A0A0A0KD69\|A0A0A0KD69_CUCSA	1.8e-69	93.71	Peptidylprolyl isomerase OS=Cucumis sativus OX=3659 GN=Csa_6G008620 PE=4 SV=1	[more]
tr\|A0A2P4KSX4\|A0A2P4KSX4_QUESU	4.1e-66	87.64	Peptidylprolyl isomerase OS=Quercus suber OX=58331 GN=CFP56_58650 PE=4 SV=1	[more]
tr\|A0A1U8A661\|A0A1U8A661_NELNU	3.5e-65	82.98	Peptidylprolyl isomerase OS=Nelumbo nucifera OX=4432 GN=LOC104597153 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR023566	PPIase_FKBP
IPR001179	PPIase_FKBP_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg02086-RA	Carg02086-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 131..171
None	No IPR available	GENE3D	G3DSA:3.10.50.40		coord: 2..124 e-value: 6.4E-38 score: 131.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 142..166
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 142..187
None	No IPR available	PANTHER	PTHR10516:SF326	SUBFAMILY NOT NAMED	coord: 7..184
None	No IPR available	SUPERFAMILY	SSF54534	FKBP-like	coord: 10..124
IPR001179	FKBP-type peptidyl-prolyl cis-trans isomerase domain	PFAM	PF00254	FKBP_C	coord: 34..118 e-value: 1.3E-27 score: 95.9
IPR001179	FKBP-type peptidyl-prolyl cis-trans isomerase domain	PROSITE	PS50059	FKBP_PPIASE	coord: 32..121 score: 26.8
IPR023566	Peptidyl-prolyl cis-trans isomerase, FKBP-type	PANTHER	PTHR10516	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE	coord: 7..184

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg02086	Cla006535	Watermelon (97103) v1	carwmB0261
Carg02086	Csa6G008620	Cucumber (Chinese Long) v2	carcuB0297
Carg02086	MELO3C008222	Melon (DHL92) v3.5.1	carmeB0267
Carg02086	ClCG11G006790	Watermelon (Charleston Gray)	carwcgB0255
Carg02086	CSPI06G01120	Wild cucumber (PI 183967)	carcpiB0301
Carg02086	Cucsa.136100	Cucumber (Gy14) v1	carcgyB0307
Carg02086	CmaCh15G000970	Cucurbita maxima (Rimu)	carcmaB0362
Carg02086	CmoCh15G001060	Cucurbita moschata (Rifu)	carcmoB0362
Carg02086	Lsi03G003680	Bottle gourd (USVL1VR-Ls)	carlsiB236
Carg02086	Cp4.1LG13g11090	Cucurbita pepo (Zucchini)	carcpeB0366
Carg02086	MELO3C008222.2	Melon (DHL92) v3.6.1	carmedB0278
Carg02086	CsaV3_6G001250	Cucumber (Chinese Long) v3	carcucB0300
Carg02086	Cla97C11G213750	Watermelon (97103) v2	carwmbB0269
Carg02086	Bhi04G001954	Wax gourd	carwgoB0349

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg02086	Silver-seed gourd	carcarB020
Carg02086	Cucumber (Gy14) v2	carcgybB0284
Carg02086	Cucurbita maxima (Rimu)	carcmaB0374
Carg02086	Cucurbita moschata (Rifu)	carcmoB0370
Carg02086	Cucurbita pepo (Zucchini)	carcpeB0374