Carg02029 (gene) Silver-seed gourd

Overview
NameCarg02029
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionTranscription termination factor like
LocationCucurbita_argyrosperma_scaffold_003 : 1798223 .. 1799344 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTAAAATTTCCTCGAAATTTCTGCTGTATTTCATCCAAAACCGGTTCGTCAATACGGCTTCTAGTTCTACATTGCCTTCAGCGTCTGTGTCTACGATTGAATTCCTCAAGAACTCTTGTGGGCTTGCTCCGGGTTCTCCTTCTTCCGCCGGTCGAAAGCTCCAATTCGATGAAAAAAGCGCCAAGAAGTACGAAGCCGTTCTTGGTTTCTTGAAATCATATGGATTCGAGAATTCGCAGATCGCCAAGTTGATCGCGAAGCAACCCTCTATACTTCAATCGAGAGTCTACAACAATCTGAAGCCTAAATTCGAGTTCCTCGAGGATATAGGGTTTGTCGGTCCTTTACTTCCTAAGGTAATTTTATTGGACCCCTCTATTCTGCAGAGGGGCTTAGATTCTCATTTGAAACCATCGTTTTGTTTCATTAAGGAAATGCTTGGATCGGATGAGCAGGCTAATGTTGCTATTCTTCGATCTTCGTGGCTTCTAACTTCTAATTTGAAGGGTGTTATGCAATCTAACGTTAATGTTTTGCTCGGTGAAGGGGTACCTTCTAGGAATATATCGAAATTGATTGGGCAGCAACCAAGAACTATTATGCATAAGGTTGATAGAGTGGTTTGTGCAGTGAAGAAGATCAAGGAATTGGGCATTGAACCACAGACTTGTATGTTTGTTCGTGCGCTTCGTGTAGTGATGTCCATGAATGACACTACTTGGAAGAAGAAAATAAATGTTTTGAAGAGTTTGGGATGGTCTGAGAAGGAGATTTTAACAGCATTTAAGAAAGACCCATATTGTTTAGCTTGTTCAGAGGAGAAAATGAGGGCTGTTGCAGATTTCTGTTTGAACACTGCAAAATTGGACCCAGAAACTGTAATTTCTAACCCCAAGTTCTTCATGTATGGACTGGACAAGTGGCTCCGGCCAAGGTTCAAAGTTCTTGAGGTTTTGAAGGTCAAAAAACTGATTAAGAACACAAAGATTGCTTGGTTACTTCTTCTAGACGAGAGAATTTTTGTGAAGAATTATGTTCTTAAGCATTTGGATGAAGTCCCAGATCTTATGGACATATTCAGGGGCAATGCCGCAGCCGAATCCAGACCTGTTCTATAG

mRNA sequence

ATGTCTAAAATTTCCTCGAAATTTCTGCTGTATTTCATCCAAAACCGGTTCGTCAATACGGCTTCTAGTTCTACATTGCCTTCAGCGTCTGTGTCTACGATTGAATTCCTCAAGAACTCTTGTGGGCTTGCTCCGGGTTCTCCTTCTTCCGCCGGTCGAAAGCTCCAATTCGATGAAAAAAGCGCCAAGAAGTACGAAGCCGTTCTTGGTTTCTTGAAATCATATGGATTCGAGAATTCGCAGATCGCCAAGTTGATCGCGAAGCAACCCTCTATACTTCAATCGAGAGTCTACAACAATCTGAAGCCTAAATTCGAGTTCCTCGAGGATATAGGGTTTGTCGGTCCTTTACTTCCTAAGGTAATTTTATTGGACCCCTCTATTCTGCAGAGGGGCTTAGATTCTCATTTGAAACCATCGTTTTGTTTCATTAAGGAAATGCTTGGATCGGATGAGCAGGCTAATGTTGCTATTCTTCGATCTTCGTGGCTTCTAACTTCTAATTTGAAGGGTGTTATGCAATCTAACGTTAATGTTTTGCTCGGTGAAGGGGTACCTTCTAGGAATATATCGAAATTGATTGGGCAGCAACCAAGAACTATTATGCATAAGGTTGATAGAGTGGTTTGTGCAGTGAAGAAGATCAAGGAATTGGGCATTGAACCACAGACTTGTATGTTTGTTCGTGCGCTTCGTGTAGTGATGTCCATGAATGACACTACTTGGAAGAAGAAAATAAATGTTTTGAAGAGTTTGGGATGGTCTGAGAAGGAGATTTTAACAGCATTTAAGAAAGACCCATATTGTTTAGCTTGTTCAGAGGAGAAAATGAGGGCTGTTGCAGATTTCTGTTTGAACACTGCAAAATTGGACCCAGAAACTGTAATTTCTAACCCCAAGTTCTTCATGTATGGACTGGACAAGTGGCTCCGGCCAAGGTTCAAAGTTCTTGAGGTTTTGAAGGTCAAAAAACTGATTAAGAACACAAAGATTGCTTGGTTACTTCTTCTAGACGAGAGAATTTTTGTGAAGAATTATGTTCTTAAGCATTTGGATGAAGTCCCAGATCTTATGGACATATTCAGGGGCAATGCCGCAGCCGAATCCAGACCTGTTCTATAG

Coding sequence (CDS)

ATGTCTAAAATTTCCTCGAAATTTCTGCTGTATTTCATCCAAAACCGGTTCGTCAATACGGCTTCTAGTTCTACATTGCCTTCAGCGTCTGTGTCTACGATTGAATTCCTCAAGAACTCTTGTGGGCTTGCTCCGGGTTCTCCTTCTTCCGCCGGTCGAAAGCTCCAATTCGATGAAAAAAGCGCCAAGAAGTACGAAGCCGTTCTTGGTTTCTTGAAATCATATGGATTCGAGAATTCGCAGATCGCCAAGTTGATCGCGAAGCAACCCTCTATACTTCAATCGAGAGTCTACAACAATCTGAAGCCTAAATTCGAGTTCCTCGAGGATATAGGGTTTGTCGGTCCTTTACTTCCTAAGGTAATTTTATTGGACCCCTCTATTCTGCAGAGGGGCTTAGATTCTCATTTGAAACCATCGTTTTGTTTCATTAAGGAAATGCTTGGATCGGATGAGCAGGCTAATGTTGCTATTCTTCGATCTTCGTGGCTTCTAACTTCTAATTTGAAGGGTGTTATGCAATCTAACGTTAATGTTTTGCTCGGTGAAGGGGTACCTTCTAGGAATATATCGAAATTGATTGGGCAGCAACCAAGAACTATTATGCATAAGGTTGATAGAGTGGTTTGTGCAGTGAAGAAGATCAAGGAATTGGGCATTGAACCACAGACTTGTATGTTTGTTCGTGCGCTTCGTGTAGTGATGTCCATGAATGACACTACTTGGAAGAAGAAAATAAATGTTTTGAAGAGTTTGGGATGGTCTGAGAAGGAGATTTTAACAGCATTTAAGAAAGACCCATATTGTTTAGCTTGTTCAGAGGAGAAAATGAGGGCTGTTGCAGATTTCTGTTTGAACACTGCAAAATTGGACCCAGAAACTGTAATTTCTAACCCCAAGTTCTTCATGTATGGACTGGACAAGTGGCTCCGGCCAAGGTTCAAAGTTCTTGAGGTTTTGAAGGTCAAAAAACTGATTAAGAACACAAAGATTGCTTGGTTACTTCTTCTAGACGAGAGAATTTTTGTGAAGAATTATGTTCTTAAGCATTTGGATGAAGTCCCAGATCTTATGGACATATTCAGGGGCAATGCCGCAGCCGAATCCAGACCTGTTCTATAG

Protein sequence

MSKISSKFLLYFIQNRFVNTASSSTLPSASVSTIEFLKNSCGLAPGSPSSAGRKLQFDEKSAKKYEAVLGFLKSYGFENSQIAKLIAKQPSILQSRVYNNLKPKFEFLEDIGFVGPLLPKVILLDPSILQRGLDSHLKPSFCFIKEMLGSDEQANVAILRSSWLLTSNLKGVMQSNVNVLLGEGVPSRNISKLIGQQPRTIMHKVDRVVCAVKKIKELGIEPQTCMFVRALRVVMSMNDTTWKKKINVLKSLGWSEKEILTAFKKDPYCLACSEEKMRAVADFCLNTAKLDPETVISNPKFFMYGLDKWLRPRFKVLEVLKVKKLIKNTKIAWLLLLDERIFVKNYVLKHLDEVPDLMDIFRGNAAAESRPVL
Homology
[Close]
BLAST of Carg02029 vs. NCBI nr
Match: XP_022957148.1 (transcription termination factor MTERF5, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 625.5 bits (1612), Expect = 1.1e-175
Identity = 371/373 (99.46%), Postives = 372/373 (99.73%), Query Frame = 0 

Query: 1   MSKISSKFLLYFIQNRFVNTASSSTLPSASVSTIEFLKNSCGLAPGSPSSAGRKLQFDEK 60
           MSKISSKFLLYFIQNRFVNTASSSTLPSASVSTIEFLKNSCGLAPGSPSSAGRKLQFDEK
Sbjct: 1   MSKISSKFLLYFIQNRFVNTASSSTLPSASVSTIEFLKNSCGLAPGSPSSAGRKLQFDEK 60

Query: 61  SAKKYEAVLGFLKSYGFENSQIAKLIAKQPSILQSRVYNNLKPKXXXXXXXXXXXXXXXX 120
           SAKKYEAVLGFLKSYGFENSQIAKLIAKQPSILQSRV NNLKPKXXXXXXXXXXXXXXXX
Sbjct: 61  SAKKYEAVLGFLKSYGFENSQIAKLIAKQPSILQSRVCNNLKPKXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXMLGSDEQANVAILRSSWLLTSNLKGVMQSNVNVL 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXMLGSDEQANVAILRSSWLLTSNLKGVMQSNVNVL
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXMLGSDEQANVAILRSSWLLTSNLKGVMQSNVNVL 180

Query: 181 LGEGVPSRNISKLIGQQPRTIMHKVDRVVCAVKKIKELGIEPQTCMFVRALRVVMSMNDT 240
           LGEGVPSRNISKLIGQQPRTIMHKVDRVVCAVKKIKELGIEPQTCMFVRALRVVMSMNDT
Sbjct: 181 LGEGVPSRNISKLIGQQPRTIMHKVDRVVCAVKKIKELGIEPQTCMFVRALRVVMSMNDT 240

Query: 241 TWKKKINVLKSLGWSEKEILTAFKKDPYCLACSEEKMRAVADFCLNTAKLDPETVISNPK 300
           TWKKKINVLKSLGWSEKEILTAFKKDPYCLACSEEKMRAVADFCLNTAKLDPETVISNPK
Sbjct: 241 TWKKKINVLKSLGWSEKEILTAFKKDPYCLACSEEKMRAVADFCLNTAKLDPETVISNPK 300

Query: 301 FFMYGLDKWLRPRFKVLEVLKVKKLIKNTKIAWLLLLDERIFVKNYVLKHLDEVPDLMDI 360
           FFMYGLDKWLRPRFKV+EVLKVKKLIKNTKIAWLLLLDERIFVKNYVLKHLDEVPDLMDI
Sbjct: 301 FFMYGLDKWLRPRFKVVEVLKVKKLIKNTKIAWLLLLDERIFVKNYVLKHLDEVPDLMDI 360

Query: 361 FRGNAAAESRPVL 374
           FRGNAAAESRPVL
Sbjct: 361 FRGNAAAESRPVL 373

[Close]
BLAST of Carg02029 vs. NCBI nr
Match: XP_022983900.1 (transcription termination factor MTERF9, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 581.6 bits (1498), Expect = 1.9e-162
Identity = 350/373 (93.83%), Postives = 358/373 (95.98%), Query Frame = 0 

Query: 1   MSKISSKFLLYFIQNRFVNTASSSTLPSASVSTIEFLKNSCGLAPGSPSSAGRKLQFDEK 60
           MSKISSKFLLYFIQNRFVNT SSSTLPSASVSTIEFLKN+CGLA  SPSSAGRKLQFDEK
Sbjct: 1   MSKISSKFLLYFIQNRFVNTVSSSTLPSASVSTIEFLKNTCGLAADSPSSAGRKLQFDEK 60

Query: 61  SAKKYEAVLGFLKSYGFENSQIAKLIAKQPSILQSRVYNNLKPKXXXXXXXXXXXXXXXX 120
           SAKKYEAVLGFLKSYGFENSQIAKLIAKQPSILQSRVYNNLKPKXXXXXXXXXXXXXXXX
Sbjct: 61  SAKKYEAVLGFLKSYGFENSQIAKLIAKQPSILQSRVYNNLKPKXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXMLGSDEQANVAILRSSWLLTSNLKGVMQSNVNVL 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXML SDEQANVAI RSSWLLTSNLKGVMQSNVNVL
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXMLESDEQANVAIRRSSWLLTSNLKGVMQSNVNVL 180

Query: 181 LGEGVPSRNISKLIGQQPRTIMHKVDRVVCAVKKIKELGIEPQTCMFVRALRVVMSMNDT 240
           LGEGVPSRNISKLIGQQPRTIM KVDR+VCAVKK+KELG+EPQT MFVRALRVV+SMNDT
Sbjct: 181 LGEGVPSRNISKLIGQQPRTIMQKVDRMVCAVKKVKELGVEPQTRMFVRALRVVLSMNDT 240

Query: 241 TWKKKINVLKSLGWSEKEILTAFKKDPYCLACSEEKMRAVADFCLNTAKLDPETVISNPK 300
           TWKKKINVLKSLGWSEKEILTAFK+DP CLACSEEKMRA ADFCLNTAKLDPETVIS PK
Sbjct: 241 TWKKKINVLKSLGWSEKEILTAFKRDPLCLACSEEKMRAAADFCLNTAKLDPETVISYPK 300

Query: 301 FFMYGLDKWLRPRFKVLEVLKVKKLIKNTKIAWLLLLDERIFVKNYVLKHLDEVPDLMDI 360
           FFMYGLDKWLRPRFKVLEVLKVKKLIKN KIAWLL L ER FV NYVLK+LDEVPDLMDI
Sbjct: 301 FFMYGLDKWLRPRFKVLEVLKVKKLIKNRKIAWLLFLGEREFVTNYVLKYLDEVPDLMDI 360

Query: 361 FRGNAAAESRPVL 374
           +RGNAAAESRPVL
Sbjct: 361 YRGNAAAESRPVL 373

[Close]
BLAST of Carg02029 vs. NCBI nr
Match: XP_022983916.1 (transcription termination factor MTERF9, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 558.1 bits (1437), Expect = 2.2e-155
Identity = 341/373 (91.42%), Postives = 350/373 (93.83%), Query Frame = 0 

Query: 1   MSKISSKFLLYFIQNRFVNTASSSTLPSASVSTIEFLKNSCGLAPGSPSSAGRKLQFDEK 60
           MSKISS FLLYFIQNRF+NT SSSTLP ASVSTIEFLKNSCGLA  SP SAGRKLQFDEK
Sbjct: 1   MSKISSTFLLYFIQNRFINTVSSSTLPLASVSTIEFLKNSCGLAADSPFSAGRKLQFDEK 60

Query: 61  SAKKYEAVLGFLKSYGFENSQIAKLIAKQPSILQSRVYNNLKPKXXXXXXXXXXXXXXXX 120
           SAKKYEAVLGFLKSYGFENSQIAKLIAKQPSILQSRVYNNLKPKXXXXXXXXXXXXXXXX
Sbjct: 61  SAKKYEAVLGFLKSYGFENSQIAKLIAKQPSILQSRVYNNLKPKXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXMLGSDEQANVAILRSSWLLTSNLKGVMQSNVNVL 180
           XXXXXXXXXXXXXXXXXXXXXXXXXX L SDEQANVAI RSSWLLTS+ KGVMQSNVNVL
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXLESDEQANVAIRRSSWLLTSSFKGVMQSNVNVL 180

Query: 181 LGEGVPSRNISKLIGQQPRTIMHKVDRVVCAVKKIKELGIEPQTCMFVRALRVVMSMNDT 240
           LGEGVPSRNISKLIG QPRTIM KVDR+VCAVKK+KELGIEP T MFV ALRVV+S++DT
Sbjct: 181 LGEGVPSRNISKLIGLQPRTIMQKVDRMVCAVKKVKELGIEPHTRMFVHALRVVVSISDT 240

Query: 241 TWKKKINVLKSLGWSEKEILTAFKKDPYCLACSEEKMRAVADFCLNTAKLDPETVISNPK 300
           TWKKKINVLKSLGWSEKEILTAFK+DPYCLACSEEKMRAVADFCLNTAKLDPETVIS PK
Sbjct: 241 TWKKKINVLKSLGWSEKEILTAFKRDPYCLACSEEKMRAVADFCLNTAKLDPETVISYPK 300

Query: 301 FFMYGLDKWLRPRFKVLEVLKVKKLIKNTKIAWLLLLDERIFVKNYVLKHLDEVPDLMDI 360
           FFM GLDK LRPRFKVLEVLKVKKLIKN KIAWLL L ER FV NYVLKHLDEVPDLMDI
Sbjct: 301 FFMSGLDKCLRPRFKVLEVLKVKKLIKNRKIAWLLFLGERNFVTNYVLKHLDEVPDLMDI 360

Query: 361 FRGNAAAESRPVL 374
           +RGNAAAESRPVL
Sbjct: 361 YRGNAAAESRPVL 373

[Close]
BLAST of Carg02029 vs. NCBI nr
Match: XP_022957147.1 (transcription termination factor MTERF5, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 540.4 bits (1391), Expect = 4.7e-150
Identity = 334/373 (89.54%), Postives = 345/373 (92.49%), Query Frame = 0 

Query: 1   MSKISSKFLLYFIQNRFVNTASSSTLPSASVSTIEFLKNSCGLAPGSPSSAGRKLQFDEK 60
           MSKISSKFLLYFIQNRFVNT SSSTLP ASVSTIEFLKNSCGLA  SPSSA RKLQFDEK
Sbjct: 1   MSKISSKFLLYFIQNRFVNTVSSSTLPLASVSTIEFLKNSCGLATDSPSSALRKLQFDEK 60

Query: 61  SAKKYEAVLGFLKSYGFENSQIAKLIAKQPSILQSRVYNNLKPKXXXXXXXXXXXXXXXX 120
           SAKKYEAV  FLKSYGFENSQIAKLIAK+PSILQSRV +NLKPK XXXXXXXXXXXXXXX
Sbjct: 61  SAKKYEAVPRFLKSYGFENSQIAKLIAKRPSILQSRVSSNLKPKFXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXMLGSDEQANVAILRSSWLLTSNLKGVMQSNVNVL 180
           XXXXXXXXXXXXXXXXXXXXXXXXXX L SDEQAN AI R SWLLTSNLKGVMQSNVNVL
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXLESDEQANFAIRRFSWLLTSNLKGVMQSNVNVL 180

Query: 181 LGEGVPSRNISKLIGQQPRTIMHKVDRVVCAVKKIKELGIEPQTCMFVRALRVVMSMNDT 240
           L EGVPSRNISKLI  QPRTI+ KVDR+VCAVKK+KELGIEP T MFV ALRVV+S++DT
Sbjct: 181 LSEGVPSRNISKLIRLQPRTILQKVDRMVCAVKKVKELGIEPHTRMFVHALRVVVSISDT 240

Query: 241 TWKKKINVLKSLGWSEKEILTAFKKDPYCLACSEEKMRAVADFCLNTAKLDPETVISNPK 300
           TWKKKINVLKSLGWSEKEILTAFK+DPYCLACSEEKMRAVADFCLNTAKLDPETVIS PK
Sbjct: 241 TWKKKINVLKSLGWSEKEILTAFKRDPYCLACSEEKMRAVADFCLNTAKLDPETVISYPK 300

Query: 301 FFMYGLDKWLRPRFKVLEVLKVKKLIKNTKIAWLLLLDERIFVKNYVLKHLDEVPDLMDI 360
           FFM GLDK LRPRFKV+EVLKVKKLIKNTKIAWLL L ER FV NYVLKHLDEVPDLMDI
Sbjct: 301 FFMSGLDKCLRPRFKVVEVLKVKKLIKNTKIAWLLFLGERNFVTNYVLKHLDEVPDLMDI 360

Query: 361 FRGNAAAESRPVL 374
           +RGNAAAESRPVL
Sbjct: 361 YRGNAAAESRPVL 373

[Close]
BLAST of Carg02029 vs. NCBI nr
Match: XP_023529167.1 (transcription termination factor MTERF5, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 537.7 bits (1384), Expect = 3.1e-149
Identity = 332/373 (89.01%), Postives = 344/373 (92.23%), Query Frame = 0 

Query: 1   MSKISSKFLLYFIQNRFVNTASSSTLPSASVSTIEFLKNSCGLAPGSPSSAGRKLQFDEK 60
           MSKISS FLLYFIQNRF+NT S STLP ASVSTIEFLKNSCGLA  SPSSA RKLQFDEK
Sbjct: 1   MSKISSTFLLYFIQNRFINTISGSTLPLASVSTIEFLKNSCGLATDSPSSALRKLQFDEK 60

Query: 61  SAKKYEAVLGFLKSYGFENSQIAKLIAKQPSILQSRVYNNLKPKXXXXXXXXXXXXXXXX 120
           SAKKYEAV  FLKSYGFENSQIAKLIAK+PSILQSRV +NLKPK XXXXXXXXXXXXXXX
Sbjct: 61  SAKKYEAVPRFLKSYGFENSQIAKLIAKRPSILQSRVSSNLKPKFXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXMLGSDEQANVAILRSSWLLTSNLKGVMQSNVNVL 180
           XXXXXXXXXXXXXXXXXXXXXXXXXX L SDEQAN AI RSSWLLT + KGVMQSNVNVL
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXLESDEQANFAIRRSSWLLTFDFKGVMQSNVNVL 180

Query: 181 LGEGVPSRNISKLIGQQPRTIMHKVDRVVCAVKKIKELGIEPQTCMFVRALRVVMSMNDT 240
           LGEGVPSRNISKLIGQQPRTIM KVDR+VCAVKK+KELGIEPQT MFVRALRVV+SMNDT
Sbjct: 181 LGEGVPSRNISKLIGQQPRTIMQKVDRMVCAVKKVKELGIEPQTRMFVRALRVVLSMNDT 240

Query: 241 TWKKKINVLKSLGWSEKEILTAFKKDPYCLACSEEKMRAVADFCLNTAKLDPETVISNPK 300
           TWKKKINV KSLGWSEKEILTAFK+DPYCLACSEEKMRAVADFC N AKLDPETVIS P 
Sbjct: 241 TWKKKINVFKSLGWSEKEILTAFKRDPYCLACSEEKMRAVADFCFNAAKLDPETVISYPT 300

Query: 301 FFMYGLDKWLRPRFKVLEVLKVKKLIKNTKIAWLLLLDERIFVKNYVLKHLDEVPDLMDI 360
           FFM GLDK LRPRFKV+EVLKVKKLI+N KIA LL+L ERIFVKNYVLKHLDEVPDLMDI
Sbjct: 301 FFMSGLDKRLRPRFKVVEVLKVKKLIENRKIARLLVLGERIFVKNYVLKHLDEVPDLMDI 360

Query: 361 FRGNAAAESRPVL 374
           +RGNAAAESRPVL
Sbjct: 361 YRGNAAAESRPVL 373

[Close]
BLAST of Carg02029 vs. TAIR10
Match: AT5G07900.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 124.4 bits (311), Expect = 1.5e-28
Identity = 107/333 (32.13%), Postives = 165/333 (49.55%), Query Frame = 0 

Query: 33  TIEFLKNSCGLAPGSPSSAGRKLQFDEKSAKKYEAVLGFLKSYGFENSQIAKLIAKQPSI 92
           T+ +L +SCGL+P S + A RKL  D  S ++   VL  L+ +GF  +QI+ L+ K+P +
Sbjct: 71  TLNYLIDSCGLSPDSATVASRKLLLD--SPERPNTVLNLLRDHGFTTAQISSLVKKRPVL 130

Query: 93  LQSRVYNNLKPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMLGSDE 152
           L +   + L PK                    XXXXXXXXXXXXXXXXXXXXXX      
Sbjct: 131 LLANAESVLLPKLSFFLSIGVSKSLLARTLASXXXXXXXXXXXXXXXXXXXXXXXXXXXX 190

Query: 153 QANVAILRSSWLLTSNLKGVMQSNVNVLLGEGVPSRNISKLIGQQPRTIMHKVDRVVCAV 212
                                      +   GVP + I  L+   P  +M K        
Sbjct: 191 XXXXXXXXXXXXXXXXXXXXXXXXXXXMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIA 250

Query: 213 KKIKELGIEPQTCMFVRALRVVMSM-NDTTWKKKINVLKSLGWSEKEILTAFKKDPYCLA 272
           K+ +E+G  PQ   FV A+  +    N + W K   V +  GWSE +I+ AFKK P+C+ 
Sbjct: 251 KQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMM 310

Query: 273 CSEEKMRAVADFCLNTAKLDPETVISNPKFFMYGLDKWLRPRFKVLEVLKVKKLIK-NTK 332
            SE K+    ++ +N   + P ++   P    + L+K + PR  V +VL    L+K +  
Sbjct: 311 LSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWS 370

Query: 333 IAWLLLLDERIFVKNYVLKHLDEVPDLMDIFRG 364
           +  LL+  E++F++  V+K+ +E+P+LM+++ G
Sbjct: 371 LTSLLVPVEKVFLEKLVIKYEEELPELMNLYLG 401

[Close]
BLAST of Carg02029 vs. TAIR10
Match: AT1G61970.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 111.3 bits (277), Expect = 1.3e-24
Identity = 135/371 (36.39%), Postives = 204/371 (54.99%), Query Frame = 0 

Query: 33  TIEFLKNSCGLAPGSPSSAGRKLQFDEKSAKKYEAVLGFLKSYGFENSQIAKLIAKQPSI 92
           T+ +L +S GL      S  RK+ F++K+    ++VL  L S+GF  SQI+ +I   P +
Sbjct: 54  TVSYLVDSLGLTTKLAESISRKVSFEDKN--NPDSVLNLLTSHGFTGSQISTIIRDYPQL 113

Query: 93  LQSRVYNNLKPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMLGSDE 152
           L +    +L PKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   L    
Sbjct: 114 LIADAEKSLGPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDTLLEKS 173

Query: 153 QANVAILRSSWLLTSNLKGVMQSNVNVLLGEGVPSRNISKLIGQQPRTIMHKVDRVVCAV 212
             N  +  S  L   NL+  ++ NV+VL   G+P + +  L+    + +  K ++    +
Sbjct: 174 SKNEKLCHS--LPQGNLENKIR-NVSVLRELGMPHKLLFSLLISDSQPVCGK-EKFEETL 233

Query: 213 KKIKELGIEPQTCMFVRALRVVMSMNDTTWKKKINVLKSLGWSEKEILTAFKKDPYCLAC 272
           KK+ E+G +P T  FV AL+V+  MN+ T ++K+++ KSLG+   ++ ++FKK P  L  
Sbjct: 234 KKVVEMGFDPTTSKFVEALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLRV 293

Query: 273 SEEKM-----------------------------------RAVADFCLNTAKLDPETVIS 332
           SE+KM                                   +   +F +       + V+S
Sbjct: 294 SEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNWPLKAVVS 353

Query: 333 NPKFFMYGLDKWLRPRFKVLEVLKVKKLIKN--TKIAWLLLLDERIFVKNYVLKHLDE-- 365
           NP  F Y L+K + PR  V++ L  K L++N    I+ +L+  +++F+  YV  H+D+  
Sbjct: 354 NPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSISCVLMCTKQVFLNRYVANHVDKQL 413

[Close]
BLAST of Carg02029 vs. TAIR10
Match: AT1G61990.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 101.7 bits (252), Expect = 1.0e-21
Identity = 98/398 (24.62%), Postives = 168/398 (42.21%), Query Frame = 0 

Query: 13  IQNRFVNTASSSTLPSASVS----------TIEFLKNSCGLAPGSPSSAGRKLQFDEKSA 72
           +QN FV + S S+  +A VS          T+ +L +S GL+     S  RK+ F++K  
Sbjct: 24  VQNAFVLSNSFSSARAADVSIRDGRKGKNFTVSYLVDSLGLSKKLAESISRKVSFEDK-- 83

Query: 73  KKYEAVLGFLKSYGFENSQIAKLIAKQPSILQSRVYNNLKPKXXXXXXXXXXXXXXXXXX 132
              ++VL   +SYGF +SQI+ +I   P +L +     L  K                  
Sbjct: 84  VNPDSVLSLFRSYGFTDSQISTIITDYPLLLVADAKKALGRK----------LQILQSRG 143

Query: 133 XXXXXXXXXXXXXXXXXXXXXXXXMLGSDEQANVAILRSSWLLTSNLKGVMQSNVNVLLG 192
                                      + +   VA   SS+ L    +G    NV+ L  
Sbjct: 144 ASSSEITEIVSTVPRILGKKSITVYYDAVKDIIVADTSSSYELPQGSQGNKIRNVSALRE 203

Query: 193 EGVPSRNISKLIGQQPRTIMHKVDRVVCAVKKIKELGIEPQTCMFVRALRVVMSMNDTTW 252
            G+PSR +  L+  + + +  K +    ++KK+ E+G +P T  FV ALR++  M++ T 
Sbjct: 204 LGMPSRLLLPLLVSKSQPVCGK-ENFDASLKKVVEMGFDPTTTKFVLALRMLYQMSEKTI 263

Query: 253 KKKINVLKSLGWSEKEILTAFKKDPY---------------------------------- 312
           ++K+ V +SLG++  ++   FKK P                                   
Sbjct: 264 EEKVVVFRSLGFTVDDVWEIFKKTPSVLKVSKKKILKSAETFLDLGYSRAEFLMMVKRYP 323

Query: 313 -CLACSEEKMRAVADFCLNTAKLDPETVISNPKFFMYGLDKWLRPRFKVLEVLKVKKLIK 362
            C+  S E ++   +F +   K     ++ +P+ F Y ++K + PR  +LE L  K L++
Sbjct: 324 PCIEYSVESVKKKNEFLVKKMKWPRNALVLHPQVFGYSMEKRIIPRCNILEALLSKGLLR 383

[Close]
BLAST of Carg02029 vs. TAIR10
Match: AT5G64950.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 96.3 bits (238), Expect = 4.3e-20
Identity = 84/344 (24.42%), Postives = 153/344 (44.48%), Query Frame = 0 

Query: 23  SSTLPSASVST---IEFLKNSCGLAPGSPSSAGRKLQFDEKSAKKYEAVLGFLKSYGFEN 82
           SS    AS+S    +EFL+++    P + + A R      KS ++  +V+  LKSY F +
Sbjct: 28  SSNATPASISNPAFVEFLRDNGFQKPLAIAIAMRYPNL--KSLEQPRSVIQMLKSYSFSD 87

Query: 83  SQIAKLIAKQPSILQSRVYNNLKPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 142
           +QI K I   P ++   V   L+PK                                   
Sbjct: 88  TQIQKSIRVHPRMMFYNVEKILEPKLRFFKDIGFTGSGLGKFVSQNSSVVGVSLVKKLIP 147

Query: 143 XXXXXXXMLG-SDEQANVAILRSSWLLTSNLKGV-MQSNVNVLLGEGVPSRNISKLIGQQ 202
                  ++    E   V + R  WLL S    + +  N++ L   G+    ++ L+ +Q
Sbjct: 148 TVEILKSIVAPKHEDLPVILSRCGWLLLSRDPNLFLLPNISYLETCGIVGSQLASLLRRQ 207

Query: 203 PRTIMHKVDRVVCAVKKIKELGIEPQTCMFVRALRVVMSMNDTTWKKKINVLKSLGWSEK 262
           PR      +++   V +  +LG    + M V A+  + S+++ T+ +K+ +  + G+SE 
Sbjct: 208 PRIFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISLSSLSEKTFDRKVKLFMANGFSED 267

Query: 263 EILTAFKKDPYCLACSEEKMRAVADFCLNTAKLDPETVISNPKFFMYGLDKWLRPRFKVL 322
           EI    ++ P  + CSE+K+    +F L    L+ E +   P    Y L+K + PR KVL
Sbjct: 268 EITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALAKRPCVLSYNLEKRVIPRLKVL 327

Query: 323 EVLKVKKLI-----KNTKIAWLLLLDERIFVKNYVLKHLDEVPD 357
           ++L+ K L+     K   +  ++ + E  F++ YV++  DE+ +
Sbjct: 328 QILREKGLLLKEEKKKKNMVGIVEMTEEAFLEKYVVRFGDEIAE 369

[Close]
BLAST of Carg02029 vs. TAIR10
Match: AT3G46950.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 86.3 bits (212), Expect = 4.4e-17
Identity = 127/422 (30.09%), Postives = 190/422 (45.02%), Query Frame = 0 

Query: 12  FIQNRFVNTASSSTLPSASVSTIEFLKNSCGLAPGSPSSAGRKLQFDEKSAKKYEAVLGF 71
           F    F +T +  + P  S  T+ +L  S GL      +  +K+ F++K     ++VL  
Sbjct: 33  FTTKSFSSTIAKDSSPKGSTFTVSYLVESLGLTKKLAETISKKVTFEDK--VNPDSVLNL 92

Query: 72  LKSYGFENSQIAKLIAKQPSILQSRVYNNLKPKXXXXXXXXXXXXXXXXXXXXXXXXXXX 131
           L+S GF++SQI+++I   P +L +    +L+PK XXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 93  LRSNGFKDSQISRIIRAYPRLLVTDAEKSLRPKLXXXXXXXXXXXXXXXXXXXXXXXXXX 152

Query: 132 XXXXXXXXXXXXXXXMLGSDEQANVAILRSSWLLTSNLKGVMQSNVNVLLGEGVPSRNIS 191
           XXXXXXX        ++   +   ++            KG    N++VL   GVP + + 
Sbjct: 153 XXXXXXXLYYDFVKDIMQDGKSLCIS-------CPEGKKGNRIRNISVLRELGVPQKLLF 212

Query: 192 KLIGQQPRTIMHKVDRVVCAVKKIKELGIEPQTCMFVRALRVVMSMNDTTWKKKINVLKS 251
            L+  + + +  K ++   ++KK+ ++G +P    FV AL VV  M++ T ++K+NV K 
Sbjct: 213 SLLISRYQPVCGK-EKFEESLKKVVDMGFDPAKSKFVEALHVVYEMSEKTIEEKVNVYKR 272

Query: 252 LGWSEKEILTAFKKDPYCL----------------------------------------- 311
           LG+SE EI   FKK PY L                                         
Sbjct: 273 LGFSEAEIWAIFKKWPYFLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 332

Query: 312 -----------------------------ACSEEKMRAVADFCLNTAKLDPETVISNPKF 362
                                                      +       E V+  P  
Sbjct: 333 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLVKMMNWPLEAVVMIPTV 392

[Close]
BLAST of Carg02029 vs. TrEMBL
Match: tr|A0A1S3BEK7|A0A1S3BEK7_CUCME (uncharacterized protein LOC103488825 OS=Cucumis melo OX=3656 GN=LOC103488825 PE=4 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 1.1e-113
Identity = 263/374 (70.32%), Postives = 314/374 (83.96%), Query Frame = 0 

Query: 1   MSKISSKFLLYFIQNRFVNTASSSTLPSASVSTIEFLKNSCGLAPGSPSSAGRKLQFDEK 60
           MSKISS FLL+F  NRF+NT  +STLP ASVSTI+FL NSCGL+ GSP+SAGRKLQF EK
Sbjct: 20  MSKISSSFLLHFFHNRFLNTIPTSTLPLASVSTIQFLTNSCGLSSGSPTSAGRKLQFGEK 79

Query: 61  SAKKYEAVLGFLKSYGFENSQIAKLIAKQPSILQSRVYNNLKPKXXXXXXXXXXXXXXXX 120
           + ++Y AV+ FLKS+GFEN QIAKL+++QPSILQSRV  NLKPKXXXXXXXXXXXXXXXX
Sbjct: 80  NTQQYGAVIDFLKSHGFENPQIAKLVSRQPSILQSRVSANLKPKXXXXXXXXXXXXXXXX 139

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXMLGSDEQANVAILRSSWLLTSNLKGVMQSNVNVL 180
           XXXXXXXXXXXXXXXXXXXXXXXXXX LGSDE+   AI R+SWLLT + KGV++SN +VL
Sbjct: 140 XXXXXXXXXXXXXXXXXXXXXXXXXXXLGSDERVTAAICRASWLLTYDFKGVIKSNFDVL 199

Query: 181 LGEGVPSRNISKLIGQQPRTIMHKVDRVVCAVKKIKELGIEPQTCMFVRALRVVMSMNDT 240
           + EGVPSRNI+K+I   PRTIM +VD+++  VK +KELGIEP+  MF +A+ V + M+D+
Sbjct: 200 VSEGVPSRNIAKMIAWNPRTIMQRVDKMIQVVKNVKELGIEPKAGMFFQAVLVRLQMSDS 259

Query: 241 TWKKKINVLKSLGWSEKEILTAFKKDPYCLACSEEKMRAVADFCLNTAKLDPETVISNPK 300
           TWKKKINV+KSLGWSEKEILTAFK+ P CL CSEEKMR VADFC NTAKLDP T+ISNP 
Sbjct: 260 TWKKKINVMKSLGWSEKEILTAFKRYPLCLTCSEEKMRDVADFCFNTAKLDPGTLISNPV 319

Query: 301 FFMYGLDKWLRPRFKVLEVLKVKKLIKNTKI--AWLLLLDERIFVKNYVLKHLDEVPDLM 360
           FF   ++K LRPR+KVLEVLKVK L++N KI  AW  +  ER FV+N V+KHLDE+P+LM
Sbjct: 320 FFKLSVNKRLRPRYKVLEVLKVKNLLRNKKIALAWWFMQGEREFVENNVVKHLDEIPNLM 379

Query: 361 DIFRGNAAAESRPV 373
           DI+RGN A+E++ V
Sbjct: 380 DIYRGNDASETQSV 393

[Close]
BLAST of Carg02029 vs. TrEMBL
Match: tr|A0A1S3BEQ3|A0A1S3BEQ3_CUCME (uncharacterized protein LOC103488865 OS=Cucumis melo OX=3656 GN=LOC103488865 PE=4 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 1.7e-108
Identity = 254/373 (68.10%), Postives = 301/373 (80.70%), Query Frame = 0 

Query: 1   MSKISSKFLLYFIQNRFVNTASSSTLPSASVSTIEFLKNSCGLAPGSPSSAGRKLQFDEK 60
           M K SS FLL+FIQ RF+NT S+STLP ASVST+EFL NSCGL+ GSP+S GRKLQFDEK
Sbjct: 1   MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTVEFLTNSCGLSSGSPTSNGRKLQFDEK 60

Query: 61  SAKKYEAVLGFLKSYGFENSQIAKLIAKQPSILQSRVYNNLKPKXXXXXXXXXXXXXXXX 120
           + ++YEAV+GFLKS+G EN QIAKL++++P ILQS+V  NLKPKXXXXXXXXXXXXXXXX
Sbjct: 61  NIQQYEAVIGFLKSHGLENPQIAKLVSRKPWILQSKVSTNLKPKXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXMLGSDEQANVAILRSSWLLTSNLKGVMQSNVNVL 180
           XXXXXXXXXXXXXXXXXXXXXXXXXX              S WLL S+ KG+++SN++VL
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSPWLLISDFKGILKSNIDVL 180

Query: 181 LGEGVPSRNISKLIGQQPRTIMHKVDRVVCAVKKIKELGIEPQTCMFVRALRVVMSMNDT 240
             EGVPSRNI+KLI    RTIM KVDR++  VK +KELGIEP+  MFV ALR+  S++D+
Sbjct: 181 ASEGVPSRNIAKLIVSNSRTIMRKVDRMIEVVKTVKELGIEPKAGMFVHALRIRCSVSDS 240

Query: 241 TWKKKINVLKSLGWSEKEILTAFKKDPYCLACSEEKMRAVADFCLNTAKLDPETVISNPK 300
           TWKKKINV+KSLGWSE EI TAFKKDP  L CSEEKMR VADFC NTAKLDP +VI  PK
Sbjct: 241 TWKKKINVMKSLGWSETEIFTAFKKDPSFLGCSEEKMRDVADFCFNTAKLDPGSVIICPK 300

Query: 301 FFMYGLDKWLRPRFKVLEVLKVKKLIKNTKIAWLLLLDERIFVKNYVLKHLDEVPDLMDI 360
            F   +DK L+PR+KVLEVLKVK L+KN  IAW+L+  ER FVK +V++HLDE+P+LMDI
Sbjct: 301 IFKCSVDKRLQPRYKVLEVLKVKNLLKNVNIAWVLVQSERAFVKKFVVRHLDEIPNLMDI 360

Query: 361 FRGNAAAESRPVL 374
           +RGN  AE++ VL
Sbjct: 361 YRGNVTAETKSVL 373

[Close]
BLAST of Carg02029 vs. TrEMBL
Match: tr|A0A1S3BGD1|A0A1S3BGD1_CUCME (transcription termination factor MTERF5, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103489539 PE=4 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 3.0e-108
Identity = 256/372 (68.82%), Postives = 308/372 (82.80%), Query Frame = 0 

Query: 1   MSKISSKFLLYFIQNRFVNTASSSTLPSASVSTIEFLKNSCGLAPGSPSSAGRKLQFDEK 60
           MSK+SS FLL+F QNRF+NT S+STLP  SVSTI+FL NSCGL+ GSP+SAGRKLQFDEK
Sbjct: 1   MSKLSSSFLLHFFQNRFLNTVSTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  SAKKYEAVLGFLKSYGFENSQIAKLIAKQPSILQSRVYNNLKPKXXXXXXXXXXXXXXXX 120
             ++Y AV+ FLKS+GFEN+QIAKL+ ++PSILQS+V NNLKPKXXXXXXXXXXXXXXXX
Sbjct: 61  HIQQYGAVIDFLKSHGFENTQIAKLVPREPSILQSKVSNNLKPKXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXMLGSDEQANVAILRSSWLLTSNLKGVMQSNVNVL 180
           XXXXXXXXXXXXXXXXXXXXXXXXXX   SDE+    + R   LLT  LKG+++SNV+VL
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXESDEKVIATVCRFPRLLTFYLKGILKSNVDVL 180

Query: 181 LGEGVPSRNISKLIGQQPRTIMHKVDRVVCAVKKIKELGIEPQTCMFVRALRVVMSMNDT 240
           + EG+PSRNI+K+I  QP TIM KVDR++  VK +KELGIEP+  MFV A+ V +SM+D+
Sbjct: 181 VSEGMPSRNIAKMIAMQPLTIMLKVDRMINTVKTVKELGIEPKAGMFVYAVIVRLSMSDS 240

Query: 241 TWKKKINVLKSLGWSEKEILTAFKKDPYCLACSEEKMRAVADFCLNTAKLDPETVISNPK 300
           TWKKKINV+KSLGWSEKEI TAFK+ P  L C+EEKMR VADFC NTAKLDP  +IS PK
Sbjct: 241 TWKKKINVMKSLGWSEKEIFTAFKRYPNYLTCTEEKMRDVADFCFNTAKLDPGALISYPK 300

Query: 301 FFMYGLDKWLRPRFKVLEVLKVKKLIKNTKIAWLLLLDERIFVKNYVLKHLDEVPDLMDI 360
            F   LDK ++PR+KVLEVLKVK L++N KIA +L   ER FVK YV+K+LD++P+LMDI
Sbjct: 301 LFKLSLDKRVQPRYKVLEVLKVKSLLRNVKIARVLAQGEREFVKTYVVKYLDKIPNLMDI 360

Query: 361 FRGNAAAESRPV 373
           +RGN AAE++ V
Sbjct: 361 YRGNIAAETKSV 372

[Close]
BLAST of Carg02029 vs. TrEMBL
Match: tr|A0A1S3BEV9|A0A1S3BEV9_CUCME (transcription termination factor MTERF5, chloroplastic-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488866 PE=4 SV=1)

HSP 1 Score: 397.5 bits (1020), Expect = 3.3e-107
Identity = 235/373 (63.00%), Postives = 294/373 (78.82%), Query Frame = 0 

Query: 1   MSKISSKFLLYFIQNRFVNTASSSTLPSASVSTIEFLKNSCGLAPGSPSSAGRKLQFDEK 60
           M K SS FLL+FIQ RF+NT S+STLP ASVSTI+FL NSCGL+ GSP S GRKLQFDE+
Sbjct: 1   MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTIQFLTNSCGLSSGSPISRGRKLQFDEE 60

Query: 61  SAKKYEAVLGFLKSYGFENSQIAKLIAKQPSILQSRVYNNLKPKXXXXXXXXXXXXXXXX 120
           + ++Y AV+GF KS+GFE+SQIAKL++++PSIL S V  NLKPK             XXX
Sbjct: 61  NLQQYGAVIGFFKSHGFEDSQIAKLVSRKPSILHSTVSTNLKPKFEFLQEIGIVGPLXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXMLGSDEQANVAILRSSWLLTSNLKGVMQSNVNVL 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXMLGSD++   AI R+SWLLTSN  G ++SN++VL
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXMLGSDKKVTAAICRTSWLLTSNSNGTVRSNIDVL 180

Query: 181 LGEGVPSRNISKLIGQQPRTIMHKVDRVVCAVKKIKELGIEPQTCMFVRALRVVMSMNDT 240
           + EGVPS NI+++I   PR++M KVDR++ AVK +KELG+EP+  MFV A+ V +SM+D+
Sbjct: 181 VSEGVPSTNIAQIIALNPRSVMRKVDRMIRAVKTVKELGVEPKDGMFVYAVSVAVSMSDS 240

Query: 241 TWKKKINVLKSLGWSEKEILTAFKKDPYCLACSEEKMRAVADFCLNTAKLDPETVISNPK 300
           TWKKKINV+KSLGWSE EI TAFK+ P  L CSEEKMR +ADFCLNTAKLDP T+IS P+
Sbjct: 241 TWKKKINVMKSLGWSENEIFTAFKRFPRFLTCSEEKMRDIADFCLNTAKLDPGTLISYPQ 300

Query: 301 FFMYGLDKWLRPRFKVLEVLKVKKLIKNTKIAWLLLLDERIFVKNYVLKHLDEVPDLMDI 360
           FF Y + K L+PR+KVLEVLK+K L+K   I  L +  ER FV+ Y++KH D++P+L+DI
Sbjct: 301 FFNYSVHKRLQPRYKVLEVLKMKNLLKTKNIGLLFVEGERRFVEKYIVKHFDKIPNLIDI 360

Query: 361 FRGNAAAESRPVL 374
           + GN  AE++ VL
Sbjct: 361 YLGNVKAETKSVL 373

[Close]
BLAST of Carg02029 vs. TrEMBL
Match: tr|A0A1S4DW83|A0A1S4DW83_CUCME (transcription termination factor MTERF9, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103488770 PE=4 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 1.2e-101
Identity = 250/373 (67.02%), Postives = 295/373 (79.09%), Query Frame = 0 

Query: 1   MSKISSKFLLYFIQNRFVNTASSSTLPSASVSTIEFLKNSCGLAPGSPSSAGRKLQFDEK 60
           M K+SS FLL+F    F+N  S+S+LP AS+STI+FL+NSCGL+ GSP+SAGRKLQFDEK
Sbjct: 1   MFKLSSNFLLHFTHKPFLNALSTSSLPLASLSTIQFLQNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  SAKKYEAVLGFLKSYGFENSQIAKLIAKQPSILQSRVYNNLKPKXXXXXXXXXXXXXXXX 120
           S +KYE V+ FL+S+ FEN QIA L++++PSILQS+V NNLKP XXXXXXXXXXXXXXXX
Sbjct: 61  SLQKYEVVIDFLRSHAFENPQIANLVSRRPSILQSKVSNNLKPXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXMLGSDEQANVAILRSSWLLTSNLKGVMQSNVNVL 180
           XXXXXXXXXXXXXXXXXXXXXXXXXX L SDEQ   AILR + LLT + KGV++ N +VL
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXLESDEQVTAAILRYTLLLTYDFKGVLKPNADVL 180

Query: 181 LGEGVPSRNISKLIGQQPRTIMHKVDRVVCAVKKIKELGIEPQTCMFVRALRVVMSMNDT 240
              GVPSR I+KLI   PR I+ KVDR++  VK +KELG EP++ MFV AL+  + M+D+
Sbjct: 181 ASVGVPSRTIAKLIVSNPRIIVQKVDRMIQVVKMVKELGFEPKSGMFVDALKARIGMSDS 240

Query: 241 TWKKKINVLKSLGWSEKEILTAFKKDPYCLACSEEKMRAVADFCLNTAKLDPETVISNPK 300
           TW KKINVLKSLGWSEKEI T FK+ P CLA SE+KMR VADFC NT KL+P TVIS P 
Sbjct: 241 TWNKKINVLKSLGWSEKEIFTLFKRMPECLARSEKKMRDVADFCFNTVKLEPGTVISYPM 300

Query: 301 FFMYGLDKWLRPRFKVLEVLKVKKLIKNTKIAWLLLLDERIFVKNYVLKHLDEVPDLMDI 360
           FF   +DK LRPR+KVLEVLKVKKL  N  IA  L   E  FV+N VLKHLDE+P+LMDI
Sbjct: 301 FFKLSIDKRLRPRYKVLEVLKVKKLPTNITIARALTQVESKFVENCVLKHLDEIPNLMDI 360

Query: 361 FRGNAAAESRPVL 374
           +RGN  AE+R VL
Sbjct: 361 YRGNVTAEARSVL 373

The following BLAST results are available for this feature:
BLAST of Carg02029 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022957148.11.1e-17599.46transcription termination factor MTERF5, chloroplastic-like [Cucurbita moschata][more]
XP_022983900.11.9e-16293.83transcription termination factor MTERF9, chloroplastic-like [Cucurbita maxima][more]
XP_022983916.12.2e-15591.42transcription termination factor MTERF9, chloroplastic-like [Cucurbita maxima][more]
XP_022957147.14.7e-15089.54transcription termination factor MTERF5, chloroplastic-like [Cucurbita moschata][more]
XP_023529167.13.1e-14989.01transcription termination factor MTERF5, chloroplastic-like [Cucurbita pepo subs... [more]
BLAST of Carg02029 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G07900.11.5e-2832.13Mitochondrial transcription termination factor family protein[more]
AT1G61970.11.3e-2436.39Mitochondrial transcription termination factor family protein[more]
AT1G61990.11.0e-2124.62Mitochondrial transcription termination factor family protein[more]
AT5G64950.14.3e-2024.42Mitochondrial transcription termination factor family protein[more]
AT3G46950.14.4e-1730.09Mitochondrial transcription termination factor family protein[more]
BLAST of Carg02029 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Carg02029 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BEK7|A0A1S3BEK7_CUCME1.1e-11370.32uncharacterized protein LOC103488825 OS=Cucumis melo OX=3656 GN=LOC103488825 PE=... [more]
tr|A0A1S3BEQ3|A0A1S3BEQ3_CUCME1.7e-10868.10uncharacterized protein LOC103488865 OS=Cucumis melo OX=3656 GN=LOC103488865 PE=... [more]
tr|A0A1S3BGD1|A0A1S3BGD1_CUCME3.0e-10868.82transcription termination factor MTERF5, chloroplastic-like OS=Cucumis melo OX=3... [more]
tr|A0A1S3BEV9|A0A1S3BEV9_CUCME3.3e-10763.00transcription termination factor MTERF5, chloroplastic-like isoform X1 OS=Cucumi... [more]
tr|A0A1S4DW83|A0A1S4DW83_CUCME1.2e-10167.02transcription termination factor MTERF9, chloroplastic-like OS=Cucumis melo OX=3... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003690double-stranded DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR038538MTERF_sf
IPR003690MTERF
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
molecular_function GO:0003690 double-stranded DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg02029-RACarg02029-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 260..291
e-value: 100.0
score: 11.6
coord: 119..150
e-value: 31.0
score: 13.5
coord: 83..114
e-value: 1.8E-4
score: 30.9
coord: 155..186
e-value: 650.0
score: 5.4
coord: 292..323
e-value: 0.97
score: 18.5
coord: 225..255
e-value: 0.81
score: 18.7
coord: 191..221
e-value: 2600.0
score: 0.6
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 69..278
e-value: 7.5E-30
score: 103.9
coord: 234..340
e-value: 2.3E-16
score: 59.6
IPR038538MTERF superfamily, mitochondrial/chloroplasticGENE3DG3DSA:1.25.70.10coord: 128..354
e-value: 1.3E-28
score: 101.9
NoneNo IPR availablePANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 6..367
NoneNo IPR availablePANTHERPTHR13068:SF20SUBFAMILY NOT NAMEDcoord: 6..367