Carg01928 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg01928
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	non-symbiotic hemoglobin 2
Location	Cucurbita_argyrosperma_scaffold_003 : 1210384 .. 1211645 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAGAGGGGTCCTGAAAGCACCTTATCCTTGAAATTTGTAGAGAGAGAAAGAGAAATGGAATTCACAGAGAAGGAAGAAGGTTTGGTGAAGGAATCATGGGATGTTTTGAGCAAGGATTTGCCTCTCTACAGCCTTCATTTCTTTACTCAGTGAGTATTAATTAATTACCTTTTATTTATTTATTTTTCCGAATAAATGGTGGTTTATTTTATTTATTATTTTTACTGTAATAATGGAAGGATATTGGAGATAGCTCCAGCAGCAAAGGGCATGTTTTCTTTCTTAAGGGAATCTGAACAGATTCCTCAGAACAATCCTAAGCTTAAGGCTCATGCACTCAAGGTTTTCAAGATGGTGAGTTTTTATTTTATTTTATTTATTTTATTTATTTTTCGCACAAATTTATTAGACGAAAATTGAGATTTAGAACGATGTGGGTGTGTGAGTTGGAATGGAATTTTGGACTCGTAATTGTCACACCGGTCTTGGGTCATAGTTTTGGTCCGAATTTTAATAGATTTCTACTGAAAAGTTAATTTTCGGGTGGAACTCATTTTTCAGATCTAGTTAGTAAAGTTAAAACATAATTTTACAAACGGAGTTTAAGTTTGGCTTCATAACTTCGAACGATATACAAAATGTAAGCTCAACTCAACCAAATGCTTGTTCGATATATGATGATTAATGTTGAAACTACTAAATTACATTTTTGGTGATGCAAACATTTGAAGTGAGTTGAAATGTTGTTGGATTGTAAACTAAAAGAAAAAAAAATGAAAAAATTGCAGACATGTGAAGCAGCCATTCAGCTGCGAGAGAAGGGGGAAGTGGTGGTCTCTGAGACTACCCTACAATATTTGGGCTCTGTCCACCTTCGTAATGGAGTCATTGATCCACATTTTGAGGTAACCTTTCAAATCACTTAATTTTTTTTTTTTTTTTAAATTTTGTATAATTTTTTCAAAATCTAAATTTAATAGAGTTTAAGGACCTATTAGATAATTATTTAAAGTTTAAGGAACCCAACAACTCTAATTTCAATAATTGAGTGGTGACTGAATCTAAAAAATTTAATGTCGAGACATTCAGGTGGTGAAAGAGGCATTGCTACGAACAGTGAAGAAAGGAATGGGAGAGAAATGGAGCGAGGAAATGGGCAATGCCTGGACCCGCGGCTTCCACGGACCAATGCGTCAGCAATCAACTCTAGCTGTAAATGAAATGAATACATAATAATTAAACAAAATAGGGGCGTGGCGGG

mRNA sequence

AGAGAGGGGTCCTGAAAGCACCTTATCCTTGAAATTTGTAGAGAGAGAAAGAGAAATGGAATTCACAGAGAAGGAAGAAGGTTTGGTGAAGGAATCATGGGATGTTTTGAGCAAGGATTTGCCTCTCTACAGCCTTCATTTCTTTACTCAGATATTGGAGATAGCTCCAGCAGCAAAGGGCATGTTTTCTTTCTTAAGGGAATCTGAACAGATTCCTCAGAACAATCCTAAGCTTAAGGCTCATGCACTCAAGGTTTTCAAGATGACATGTGAAGCAGCCATTCAGCTGCGAGAGAAGGGGGAAGTGGTGGTCTCTGAGACTACCCTACAATATTTGGGCTCTGTCCACCTTCGTAATGGAGTCATTGATCCACATTTTGAGGTGGTGAAAGAGGCATTGCTACGAACAGTGAAGAAAGGAATGGGAGAGAAATGGAGCGAGGAAATGGGCAATGCCTGGACCCGCGGCTTCCACGGACCAATGCGTCAGCAATCAACTCTAGCTGTAAATGAAATGAATACATAATAATTAAACAAAATAGGGGCGTGGCGGG

Coding sequence (CDS)

ATGGAATTCACAGAGAAGGAAGAAGGTTTGGTGAAGGAATCATGGGATGTTTTGAGCAAGGATTTGCCTCTCTACAGCCTTCATTTCTTTACTCAGATATTGGAGATAGCTCCAGCAGCAAAGGGCATGTTTTCTTTCTTAAGGGAATCTGAACAGATTCCTCAGAACAATCCTAAGCTTAAGGCTCATGCACTCAAGGTTTTCAAGATGACATGTGAAGCAGCCATTCAGCTGCGAGAGAAGGGGGAAGTGGTGGTCTCTGAGACTACCCTACAATATTTGGGCTCTGTCCACCTTCGTAATGGAGTCATTGATCCACATTTTGAGGTGGTGAAAGAGGCATTGCTACGAACAGTGAAGAAAGGAATGGGAGAGAAATGGAGCGAGGAAATGGGCAATGCCTGGACCCGCGGCTTCCACGGACCAATGCGTCAGCAATCAACTCTAGCTGTAAATGAAATGAATACATAA

Protein sequence

MEFTEKEEGLVKESWDVLSKDLPLYSLHFFTQILEIAPAAKGMFSFLRESEQIPQNNPKLKAHALKVFKMTCEAAIQLREKGEVVVSETTLQYLGSVHLRNGVIDPHFEVVKEALLRTVKKGMGEKWSEEMGNAWTRGFHGPMRQQSTLAVNEMNT

Homology

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BLAST of Carg01928 vs. NCBI nr
Match: XP_022956839.1 (non-symbiotic hemoglobin 2 [Cucurbita moschata])

HSP 1 Score: 274.2 bits (700), Expect = 2.6e-70
Identity = 134/139 (96.40%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 1   MEFTEKEEGLVKESWDVLSKDLPLYSLHFFTQILEIAPAAKGMFSFLRESEQIPQNNPKL 60
           MEFTEKEEGLVKESWDVL+KDLPLYSLHFFTQILEIAPAAKGMFSFLR+SEQIPQNNPKL
Sbjct: 1   MEFTEKEEGLVKESWDVLNKDLPLYSLHFFTQILEIAPAAKGMFSFLRDSEQIPQNNPKL 60

Query: 61  KAHALKVFKMTCEAAIQLREKGEVVVSETTLQYLGSVHLRNGVIDPHFEVVKEALLRTVK 120
           KAHALKVFKMTCEAAIQLREKGEVVVSETTLQYLGSVHLRNGVIDPHFEVVKEALLRTVK
Sbjct: 61  KAHALKVFKMTCEAAIQLREKGEVVVSETTLQYLGSVHLRNGVIDPHFEVVKEALLRTVK 120

Query: 121 KGMGEKWSEEMGNAWTRGF 140
           KGMGE+WSEEMGNAWTR +
Sbjct: 121 KGMGEQWSEEMGNAWTRAY 139

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BLAST of Carg01928 vs. NCBI nr
Match: XP_023531346.1 (non-symbiotic hemoglobin 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 273.1 bits (697), Expect = 5.9e-70
Identity = 133/139 (95.68%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 1   MEFTEKEEGLVKESWDVLSKDLPLYSLHFFTQILEIAPAAKGMFSFLRESEQIPQNNPKL 60
           MEFTEKEEGLVKESWDVL+KDLPLYSLHFFTQILEIAPAAKGMFSFLR+SEQIPQNNPKL
Sbjct: 1   MEFTEKEEGLVKESWDVLNKDLPLYSLHFFTQILEIAPAAKGMFSFLRDSEQIPQNNPKL 60

Query: 61  KAHALKVFKMTCEAAIQLREKGEVVVSETTLQYLGSVHLRNGVIDPHFEVVKEALLRTVK 120
           KAHALKVFKMTCEAAIQLREKGEVVVSETTLQYLGSVHLRNGVIDPHFEVVK+ALLRTVK
Sbjct: 61  KAHALKVFKMTCEAAIQLREKGEVVVSETTLQYLGSVHLRNGVIDPHFEVVKDALLRTVK 120

Query: 121 KGMGEKWSEEMGNAWTRGF 140
           KGMGE+WSEEMGNAWTR +
Sbjct: 121 KGMGEQWSEEMGNAWTRAY 139

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BLAST of Carg01928 vs. NCBI nr
Match: XP_022984835.1 (non-symbiotic hemoglobin 2 [Cucurbita maxima])

HSP 1 Score: 261.2 bits (666), Expect = 2.3e-66
Identity = 127/139 (91.37%), Postives = 133/139 (95.68%), Query Frame = 0


Query: 1   MEFTEKEEGLVKESWDVLSKDLPLYSLHFFTQILEIAPAAKGMFSFLRESEQIPQNNPKL 60
           MEFTEKEEGLVKESWDVL KDLPLYSLHFFTQILEIAPAAK MFSFL+ SE++ QNNPKL
Sbjct: 1   MEFTEKEEGLVKESWDVLKKDLPLYSLHFFTQILEIAPAAKDMFSFLKGSEEVTQNNPKL 60

Query: 61  KAHALKVFKMTCEAAIQLREKGEVVVSETTLQYLGSVHLRNGVIDPHFEVVKEALLRTVK 120
           KAHALKVFKMTCEAAIQLREKGEVVVS+TTLQYLGSVHLRNGVIDPHFEVVKEALLRTVK
Sbjct: 61  KAHALKVFKMTCEAAIQLREKGEVVVSQTTLQYLGSVHLRNGVIDPHFEVVKEALLRTVK 120

Query: 121 KGMGEKWSEEMGNAWTRGF 140
           KGMGE+W EEMGNAWTR +
Sbjct: 121 KGMGEEWGEEMGNAWTRAY 139

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BLAST of Carg01928 vs. NCBI nr
Match: XP_008446801.1 (PREDICTED: non-symbiotic hemoglobin 2 [Cucumis melo])

HSP 1 Score: 258.8 bits (660), Expect = 1.2e-65
Identity = 124/140 (88.57%), Postives = 134/140 (95.71%), Query Frame = 0


Query: 1   MEFTEKEEGLVKESWDVLSKDLPLYSLHFFTQILEIAPAAKGMFSFLRESEQIPQNNPKL 60
           M+FTEKEE LVKES++VL KDLP YSLHFFTQILEIAPAAKGMFSFLR+SE IP NNPKL
Sbjct: 1   MDFTEKEESLVKESYEVLKKDLPFYSLHFFTQILEIAPAAKGMFSFLRDSEDIPHNNPKL 60

Query: 61  KAHALKVFKMTCEAAIQLREKGEVVVSETTLQYLGSVHLRNGVIDPHFEVVKEALLRTVK 120
           KAHALKVFKMTCEAAIQL+EKGEV+VSETTLQYLGSVHLRNGVIDPHFEVVKEALLRTVK
Sbjct: 61  KAHALKVFKMTCEAAIQLKEKGEVIVSETTLQYLGSVHLRNGVIDPHFEVVKEALLRTVK 120

Query: 121 KGMGEKWSEEMGNAWTRGFH 141
           +G+GEKWSEEMGNAWT+ +H
Sbjct: 121 EGVGEKWSEEMGNAWTKAYH 140

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BLAST of Carg01928 vs. NCBI nr
Match: XP_022139007.1 (non-symbiotic hemoglobin 2 [Momordica charantia])

HSP 1 Score: 238.4 bits (607), Expect = 1.6e-59
Identity = 116/139 (83.45%), Postives = 129/139 (92.81%), Query Frame = 0


Query: 1   MEFTEKEEGLVKESWDVLSKDLPLYSLHFFTQILEIAPAAKGMFSFLRESEQIPQNNPKL 60
           M+FTEKEE LVKESW+VL KDLPLYSL FFTQILEIAPAAKGMFSFLR+SE+IP NNPKL
Sbjct: 1   MDFTEKEELLVKESWEVLKKDLPLYSLRFFTQILEIAPAAKGMFSFLRDSEEIPHNNPKL 60

Query: 61  KAHALKVFKMTCEAAIQLREKGEVVVSETTLQYLGSVHLRNGVIDPHFEVVKEALLRTVK 120
           KAHALKVFKMTCE+AIQLREKGEVVVSETTL YLGSVHL+NGVI PHFEVVKEALLRTVK
Sbjct: 61  KAHALKVFKMTCESAIQLREKGEVVVSETTLNYLGSVHLQNGVIAPHFEVVKEALLRTVK 120

Query: 121 KGMGEKWSEEMGNAWTRGF 140
           + +GEKWS+E+ +AW + +
Sbjct: 121 EAVGEKWSDEVDSAWGKAY 139

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BLAST of Carg01928 vs. TAIR10
Match: AT3G10520.1 (haemoglobin 2)

HSP 1 Score: 224.2 bits (570), Expect = 5.7e-59
Identity = 101/137 (73.72%), Postives = 129/137 (94.16%), Query Frame = 0


Query: 3   FTEKEEGLVKESWDVLSKDLPLYSLHFFTQILEIAPAAKGMFSFLRESEQIPQNNPKLKA 62
           FTEK+E LVKESW++L +D+P YSLHFF+QILEIAPAAKG+FSFLR+S+++P NNPKLKA
Sbjct: 6   FTEKQEALVKESWEILKQDIPKYSLHFFSQILEIAPAAKGLFSFLRDSDEVPHNNPKLKA 65

Query: 63  HALKVFKMTCEAAIQLREKGEVVVSETTLQYLGSVHLRNGVIDPHFEVVKEALLRTVKKG 122
           HA+KVFKMTCE AIQLRE+G+VVV++TTLQYLGS+HL++GVIDPHFEVVKEALLRT+K+G
Sbjct: 66  HAVKVFKMTCETAIQLREEGKVVVADTTLQYLGSIHLKSGVIDPHFEVVKEALLRTLKEG 125

Query: 123 MGEKWSEEMGNAWTRGF 140
           +GEK++EE+  AW++ +
Sbjct: 126 LGEKYNEEVEGAWSQAY 142

[Close]

BLAST of Carg01928 vs. TAIR10
Match: AT2G16060.1 (hemoglobin 1)

HSP 1 Score: 143.7 bits (361), Expect = 9.8e-35
Identity = 71/137 (51.82%), Postives = 93/137 (67.88%), Query Frame = 0


Query: 3   FTEKEEGLVKESWDVLSKDLPLYSLHFFTQILEIAPAAKGMFSFLRESEQIPQNNPKLKA 62
           FTE++E LV +SW V+ K+     L  F +I EIAP  K MFSFLR+S    + NPKLK 
Sbjct: 9   FTEEQEALVVKSWSVMKKNSAELGLKLFIKIFEIAPTTKKMFSFLRDSPIPAEQNPKLKP 68

Query: 63  HALKVFKMTCEAAIQLREKGEVVVSETTLQYLGSVHLRNGVIDPHFEVVKEALLRTVKKG 122
           HA+ VF M CE+A+QLR+ G+V V ETTL+ LG+ H + GV+D HFEV K ALL T+K+ 
Sbjct: 69  HAMSVFVMCCESAVQLRKTGKVTVRETTLKRLGASHSKYGVVDEHFEVAKYALLETIKEA 128

Query: 123 MGEKWSEEMGNAWTRGF 140
           + E WS EM  AW + +
Sbjct: 129 VPEMWSPEMKVAWGQAY 145

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BLAST of Carg01928 vs. Swiss-Prot
Match: sp|O24521|HBL2_ARATH (Non-symbiotic hemoglobin 2 OS=Arabidopsis thaliana OX=3702 GN=AHB2 PE=1 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.0e-57
Identity = 101/137 (73.72%), Postives = 129/137 (94.16%), Query Frame = 0


Query: 3   FTEKEEGLVKESWDVLSKDLPLYSLHFFTQILEIAPAAKGMFSFLRESEQIPQNNPKLKA 62
           FTEK+E LVKESW++L +D+P YSLHFF+QILEIAPAAKG+FSFLR+S+++P NNPKLKA
Sbjct: 6   FTEKQEALVKESWEILKQDIPKYSLHFFSQILEIAPAAKGLFSFLRDSDEVPHNNPKLKA 65

Query: 63  HALKVFKMTCEAAIQLREKGEVVVSETTLQYLGSVHLRNGVIDPHFEVVKEALLRTVKKG 122
           HA+KVFKMTCE AIQLRE+G+VVV++TTLQYLGS+HL++GVIDPHFEVVKEALLRT+K+G
Sbjct: 66  HAVKVFKMTCETAIQLREEGKVVVADTTLQYLGSIHLKSGVIDPHFEVVKEALLRTLKEG 125

Query: 123 MGEKWSEEMGNAWTRGF 140
           +GEK++EE+  AW++ +
Sbjct: 126 LGEKYNEEVEGAWSQAY 142

[Close]

BLAST of Carg01928 vs. Swiss-Prot
Match: sp|Q941Q2|HBL2_BRANA (Non-symbiotic hemoglobin 2 OS=Brassica napus OX=3708 GN=HB2 PE=3 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 1.5e-56
Identity = 99/137 (72.26%), Postives = 127/137 (92.70%), Query Frame = 0


Query: 3   FTEKEEGLVKESWDVLSKDLPLYSLHFFTQILEIAPAAKGMFSFLRESEQIPQNNPKLKA 62
           FTEK+E LVKESW++L +D+P YSLHFF+QILEIAPAAK MFSFLR+++++P NNPKLKA
Sbjct: 6   FTEKQEALVKESWEILKQDIPKYSLHFFSQILEIAPAAKDMFSFLRDTDEVPHNNPKLKA 65

Query: 63  HALKVFKMTCEAAIQLREKGEVVVSETTLQYLGSVHLRNGVIDPHFEVVKEALLRTVKKG 122
           HA+KVFKMTCE AIQLREKG+VVV++TTLQYLGSVH ++GV+DPHFEVVKEAL+RT+K+G
Sbjct: 66  HAVKVFKMTCETAIQLREKGKVVVADTTLQYLGSVHFKSGVLDPHFEVVKEALVRTLKEG 125

Query: 123 MGEKWSEEMGNAWTRGF 140
           +GEK++EE+  AW++ +
Sbjct: 126 LGEKYNEEVEGAWSKAY 142

[Close]

BLAST of Carg01928 vs. Swiss-Prot
Match: sp|Q93Y92|HBL2_GOSHI (Non-symbiotic hemoglobin 2 OS=Gossypium hirsutum OX=3635 GN=HB2 PE=3 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 4.8e-55
Identity = 104/140 (74.29%), Postives = 125/140 (89.29%), Query Frame = 0


Query: 1   MEFTEKEEGLVKESWDVLSKDLPLYSLHFFTQILEIAPAAKGMFSFLRESEQIPQNNPKL 60
           M FTEK+EGLVKESW+VL +D+P  SL FF+ ILEIAP AK MFSFLRESE+IPQNNPKL
Sbjct: 1   MGFTEKQEGLVKESWEVLKQDIPHSSLRFFSLILEIAPGAKNMFSFLRESEEIPQNNPKL 60

Query: 61  KAHALKVFKMTCEAAIQLREKGEVVVSETTLQYLGSVHLRNGVIDPHFEVVKEALLRTVK 120
           KAHA+KVFKMTCE+AIQLREKGEVVV++TTL+YLG+VH+++GV DPHFEVVKEALLRT++
Sbjct: 61  KAHAVKVFKMTCESAIQLREKGEVVVADTTLKYLGTVHVKSGVKDPHFEVVKEALLRTIE 120

Query: 121 KGMG-EKWSEEMGNAWTRGF 140
           + +G EKW+EEM NAW   +
Sbjct: 121 EAIGEEKWNEEMKNAWGEAY 140

[Close]

BLAST of Carg01928 vs. Swiss-Prot
Match: sp|Q941P9|HBL2_SOLLC (Non-symbiotic hemoglobin 2 OS=Solanum lycopersicum OX=4081 GN=HB2 PE=2 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 5.5e-51
Identity = 92/139 (66.19%), Postives = 117/139 (84.17%), Query Frame = 0


Query: 1   MEFTEKEEGLVKESWDVLSKDLPLYSLHFFTQILEIAPAAKGMFSFLRESEQIPQNNPKL 60
           M FT+K+E LV++SW+ + +D+P  SL FF+ ILEIAP AK MFSFL++S+++P+NNPKL
Sbjct: 1   MGFTDKQEALVRDSWEFMKQDIPQLSLRFFSLILEIAPVAKNMFSFLKDSDELPENNPKL 60

Query: 61  KAHALKVFKMTCEAAIQLREKGEVVVSETTLQYLGSVHLRNGVIDPHFEVVKEALLRTVK 120
           +AHA+KVFKMTCE+AIQLREKGEVVV ETTL+YLGS+HL+  V DPHFEVVKEALLRTVK
Sbjct: 61  RAHAVKVFKMTCESAIQLREKGEVVVGETTLKYLGSIHLQKRVADPHFEVVKEALLRTVK 120

Query: 121 KGMGEKWSEEMGNAWTRGF 140
           +  G KW +EM  AW+  +
Sbjct: 121 EATGNKWKDEMKEAWSEAY 139

[Close]

BLAST of Carg01928 vs. Swiss-Prot
Match: sp|P08054|HBP1_CASGL (Hemoglobin-1 OS=Casuarina glauca OX=3522 PE=1 SV=2)

HSP 1 Score: 168.3 bits (425), Expect = 6.7e-41
Identity = 75/140 (53.57%), Postives = 105/140 (75.00%), Query Frame = 0


Query: 1   MEFTEKEEGLVKESWDVLSKDLPLYSLHFFTQILEIAPAAKGMFSFLRESEQIPQNNPKL 60
           M  TEK+E L+K+SW+VL +++P +SL  F  I+E AP +K +FSFL++S +IP+NNPKL
Sbjct: 1   MALTEKQEALLKQSWEVLKQNIPAHSLRLFALIIEAAPESKYVFSFLKDSNEIPENNPKL 60

Query: 61  KAHALKVFKMTCEAAIQLREKGEVVVSETTLQYLGSVHLRNGVIDPHFEVVKEALLRTVK 120
           KAHA  +FK  CE+A +LR+KG  V    TL+ LGS+HL+N + DPHFEV+K ALL T+K
Sbjct: 61  KAHAAVIFKTICESATELRQKGHAVWDNNTLKRLGSIHLKNKITDPHFEVMKGALLGTIK 120

Query: 121 KGMGEKWSEEMGNAWTRGFH 141
           + + E WS+EMG AWT  ++
Sbjct: 121 EAIKENWSDEMGQAWTEAYN 140

[Close]

BLAST of Carg01928 vs. TrEMBL
Match: tr|A0A1S3BFZ4|A0A1S3BFZ4_CUCME (non-symbiotic hemoglobin 2 OS=Cucumis melo OX=3656 GN=LOC103489422 PE=3 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 7.6e-66
Identity = 124/140 (88.57%), Postives = 134/140 (95.71%), Query Frame = 0


Query: 1   MEFTEKEEGLVKESWDVLSKDLPLYSLHFFTQILEIAPAAKGMFSFLRESEQIPQNNPKL 60
           M+FTEKEE LVKES++VL KDLP YSLHFFTQILEIAPAAKGMFSFLR+SE IP NNPKL
Sbjct: 1   MDFTEKEESLVKESYEVLKKDLPFYSLHFFTQILEIAPAAKGMFSFLRDSEDIPHNNPKL 60

Query: 61  KAHALKVFKMTCEAAIQLREKGEVVVSETTLQYLGSVHLRNGVIDPHFEVVKEALLRTVK 120
           KAHALKVFKMTCEAAIQL+EKGEV+VSETTLQYLGSVHLRNGVIDPHFEVVKEALLRTVK
Sbjct: 61  KAHALKVFKMTCEAAIQLKEKGEVIVSETTLQYLGSVHLRNGVIDPHFEVVKEALLRTVK 120

Query: 121 KGMGEKWSEEMGNAWTRGFH 141
           +G+GEKWSEEMGNAWT+ +H
Sbjct: 121 EGVGEKWSEEMGNAWTKAYH 140

[Close]

BLAST of Carg01928 vs. TrEMBL
Match: tr|A0A1J3IJ15|A0A1J3IJ15_NOCCA (Non-symbiotic hemoglobin 2 OS=Noccaea caerulescens OX=107243 GN=MP_TR7898_c20_g1_i1_g.23870 PE=3 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 3.2e-56
Identity = 103/137 (75.18%), Postives = 129/137 (94.16%), Query Frame = 0


Query: 3   FTEKEEGLVKESWDVLSKDLPLYSLHFFTQILEIAPAAKGMFSFLRESEQIPQNNPKLKA 62
           FTEK+E LVKESW++L +D+P YSLHFF+QILEIAPAAK MFSFLR+S+++P NNPKLKA
Sbjct: 6   FTEKQEALVKESWEILKQDIPKYSLHFFSQILEIAPAAKDMFSFLRDSDEVPHNNPKLKA 65

Query: 63  HALKVFKMTCEAAIQLREKGEVVVSETTLQYLGSVHLRNGVIDPHFEVVKEALLRTVKKG 122
           HA+KVFKMTCE AIQLREKG+VVV++TTLQYLGSVHL+NGV+DPHFEVVKEAL+RT+K+G
Sbjct: 66  HAVKVFKMTCETAIQLREKGKVVVADTTLQYLGSVHLKNGVLDPHFEVVKEALVRTLKEG 125

Query: 123 MGEKWSEEMGNAWTRGF 140
           +GEK++EE+ NAW++ +
Sbjct: 126 LGEKYNEEVENAWSQAY 142

[Close]

BLAST of Carg01928 vs. TrEMBL
Match: tr|A0A087H8I9|A0A087H8I9_ARAAL (Uncharacterized protein OS=Arabis alpina OX=50452 GN=AALP_AA3G113800 PE=3 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 3.2e-56
Identity = 102/139 (73.38%), Postives = 131/139 (94.24%), Query Frame = 0


Query: 1   MEFTEKEEGLVKESWDVLSKDLPLYSLHFFTQILEIAPAAKGMFSFLRESEQIPQNNPKL 60
           +EFTEK+E LVKESW++L +D+P YSLHFF+QILEIAPAAKG+FSFLR+S+++P NNPKL
Sbjct: 4   IEFTEKQEALVKESWEILKQDIPKYSLHFFSQILEIAPAAKGLFSFLRDSDEVPHNNPKL 63

Query: 61  KAHALKVFKMTCEAAIQLREKGEVVVSETTLQYLGSVHLRNGVIDPHFEVVKEALLRTVK 120
           KAHA+KVFKMTCE AIQLREKG+VVV++TTLQYLGS+HL++GVIDPHFEVVKEAL+RT+K
Sbjct: 64  KAHAVKVFKMTCETAIQLREKGKVVVADTTLQYLGSIHLKSGVIDPHFEVVKEALVRTLK 123

Query: 121 KGMGEKWSEEMGNAWTRGF 140
           +G+GEK++EE+  AW++ +
Sbjct: 124 EGLGEKYNEEVEGAWSQAY 142

[Close]

BLAST of Carg01928 vs. TrEMBL
Match: tr|A0A1J3DNA4|A0A1J3DNA4_NOCCA (Non-symbiotic hemoglobin 2 OS=Noccaea caerulescens OX=107243 GN=GA_TR7992_c0_g1_i1_g.25844 PE=3 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 4.2e-56
Identity = 103/137 (75.18%), Postives = 129/137 (94.16%), Query Frame = 0


Query: 3   FTEKEEGLVKESWDVLSKDLPLYSLHFFTQILEIAPAAKGMFSFLRESEQIPQNNPKLKA 62
           FTEK+E LVKESW++L +D+P YSLHFF+QILEIAPAAK MFSFLR+S+++P NNPKLKA
Sbjct: 6   FTEKQEALVKESWEILKQDIPKYSLHFFSQILEIAPAAKEMFSFLRDSDEVPHNNPKLKA 65

Query: 63  HALKVFKMTCEAAIQLREKGEVVVSETTLQYLGSVHLRNGVIDPHFEVVKEALLRTVKKG 122
           HA+KVFKMTCE AIQLREKG+VVV++TTLQYLGSVHL+NGV+DPHFEVVKEAL+RT+K+G
Sbjct: 66  HAVKVFKMTCETAIQLREKGKVVVADTTLQYLGSVHLKNGVLDPHFEVVKEALVRTLKEG 125

Query: 123 MGEKWSEEMGNAWTRGF 140
           +GEK++EE+ NAW++ +
Sbjct: 126 LGEKYNEEVENAWSQAY 142

[Close]

BLAST of Carg01928 vs. TrEMBL
Match: tr|A0A2C9VK05|A0A2C9VK05_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_07G093600 PE=3 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 7.2e-56
Identity = 106/139 (76.26%), Postives = 124/139 (89.21%), Query Frame = 0


Query: 1   MEFTEKEEGLVKESWDVLSKDLPLYSLHFFTQILEIAPAAKGMFSFLRESEQIPQNNPKL 60
           M F EKEEGLVKESW+++ +D+PLYSL FF+ ILEIAPAAK MFSFLRES +IPQ NPKL
Sbjct: 1   MVFNEKEEGLVKESWEIMKQDIPLYSLGFFSSILEIAPAAKDMFSFLRESNEIPQTNPKL 60

Query: 61  KAHALKVFKMTCEAAIQLREKGEVVVSETTLQYLGSVHLRNGVIDPHFEVVKEALLRTVK 120
           KAHA+KVFKMTCE+AIQLREKG VVVS+TTL+YLGSVHL+NGV+DPHF+VVKEALLRTVK
Sbjct: 61  KAHAVKVFKMTCESAIQLREKGGVVVSDTTLKYLGSVHLKNGVLDPHFQVVKEALLRTVK 120

Query: 121 KGMGEKWSEEMGNAWTRGF 140
             +G+KWS+EMG AW   +
Sbjct: 121 TAVGDKWSDEMGGAWCEAY 139

The following BLAST results are available for this feature:

BLAST of Carg01928 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022956839.1	2.6e-70	96.40	non-symbiotic hemoglobin 2 [Cucurbita moschata]	[more]
XP_023531346.1	5.9e-70	95.68	non-symbiotic hemoglobin 2 [Cucurbita pepo subsp. pepo]	[more]
XP_022984835.1	2.3e-66	91.37	non-symbiotic hemoglobin 2 [Cucurbita maxima]	[more]
XP_008446801.1	1.2e-65	88.57	PREDICTED: non-symbiotic hemoglobin 2 [Cucumis melo]	[more]
XP_022139007.1	1.6e-59	83.45	non-symbiotic hemoglobin 2 [Momordica charantia]	[more]

BLAST of Carg01928 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G10520.1	5.7e-59	73.72	haemoglobin 2	[more]
AT2G16060.1	9.8e-35	51.82	hemoglobin 1	[more]

BLAST of Carg01928 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O24521\|HBL2_ARATH	1.0e-57	73.72	Non-symbiotic hemoglobin 2 OS=Arabidopsis thaliana OX=3702 GN=AHB2 PE=1 SV=1	[more]
sp\|Q941Q2\|HBL2_BRANA	1.5e-56	72.26	Non-symbiotic hemoglobin 2 OS=Brassica napus OX=3708 GN=HB2 PE=3 SV=1	[more]
sp\|Q93Y92\|HBL2_GOSHI	4.8e-55	74.29	Non-symbiotic hemoglobin 2 OS=Gossypium hirsutum OX=3635 GN=HB2 PE=3 SV=1	[more]
sp\|Q941P9\|HBL2_SOLLC	5.5e-51	66.19	Non-symbiotic hemoglobin 2 OS=Solanum lycopersicum OX=4081 GN=HB2 PE=2 SV=1	[more]
sp\|P08054\|HBP1_CASGL	6.7e-41	53.57	Hemoglobin-1 OS=Casuarina glauca OX=3522 PE=1 SV=2	[more]

BLAST of Carg01928 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BFZ4\|A0A1S3BFZ4_CUCME	7.6e-66	88.57	non-symbiotic hemoglobin 2 OS=Cucumis melo OX=3656 GN=LOC103489422 PE=3 SV=1	[more]
tr\|A0A1J3IJ15\|A0A1J3IJ15_NOCCA	3.2e-56	75.18	Non-symbiotic hemoglobin 2 OS=Noccaea caerulescens OX=107243 GN=MP_TR7898_c20_g1...	[more]
tr\|A0A087H8I9\|A0A087H8I9_ARAAL	3.2e-56	73.38	Uncharacterized protein OS=Arabis alpina OX=50452 GN=AALP_AA3G113800 PE=3 SV=1	[more]
tr\|A0A1J3DNA4\|A0A1J3DNA4_NOCCA	4.2e-56	75.18	Non-symbiotic hemoglobin 2 OS=Noccaea caerulescens OX=107243 GN=GA_TR7992_c0_g1_...	[more]
tr\|A0A2C9VK05\|A0A2C9VK05_MANES	7.2e-56	76.26	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_07G093600 PE=3 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0020037	heme binding
GO:0019825	oxygen binding

Vocabulary: **INTERPRO**
Term	Definition
IPR009050	Globin-like_sf
IPR019824	Leghaemoglobin_Fe_BS
IPR012292	Globin/Proto
IPR000971	Globin
IPR001032	Leghaemoglobin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0020037	heme binding
molecular_function	GO:0019825	oxygen binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg01928-RA	Carg01928-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001032	Leghaemoglobin	PRINTS	PR00188	PLANTGLOBIN	coord: 29..49 score: 64.4 coord: 122..148 score: 27.47 coord: 57..85 score: 62.62 coord: 4..21 score: 43.84
IPR000971	Globin	PFAM	PF00042	Globin	coord: 9..116 e-value: 5.9E-17 score: 62.1
IPR000971	Globin	PROSITE	PS01033	GLOBIN	coord: 3..137 score: 28.934
IPR012292	Globin/Protoglobin	GENE3D	G3DSA:1.10.490.10		coord: 1..141 e-value: 9.3E-48 score: 164.1
None	No IPR available	PANTHER	PTHR22924	LEGHEMOGLOBIN-RELATED	coord: 2..139
None	No IPR available	PANTHER	PTHR22924:SF39	NON-SYMBIOTIC HEMOGLOBIN 2	coord: 2..139
None	No IPR available	CDD	cd08923	class1-2_nsHbs_Lbs	coord: 3..136 e-value: 2.80022E-86 score: 251.257
IPR019824	Leghaemoglobin, iron-binding site	PROSITE	PS00208	PLANT_GLOBIN	coord: 57..68
IPR009050	Globin-like superfamily	SUPERFAMILY	SSF46458	Globin-like	coord: 1..139

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg01928	Cla020521	Watermelon (97103) v1	carwmB0842
Carg01928	Csa5G621920	Cucumber (Chinese Long) v2	carcuB0857
Carg01928	MELO3C012382	Melon (DHL92) v3.5.1	carmeB0834
Carg01928	ClCG05G021450	Watermelon (Charleston Gray)	carwcgB0816
Carg01928	CSPI05G26650	Wild cucumber (PI 183967)	carcpiB0877
Carg01928	Cucsa.308830	Cucumber (Gy14) v1	carcgyB0969
Carg01928	CmaCh04G014010	Cucurbita maxima (Rimu)	carcmaB1170
Carg01928	CmoCh04G014750	Cucurbita moschata (Rifu)	carcmoB1138
Carg01928	Lsi04G001180	Bottle gourd (USVL1VR-Ls)	carlsiB767
Carg01928	Cp4.1LG01g14450	Cucurbita pepo (Zucchini)	carcpeB1177
Carg01928	MELO3C012382.2	Melon (DHL92) v3.6.1	carmedB0846
Carg01928	CsaV3_5G035800	Cucumber (Chinese Long) v3	carcucB0881
Carg01928	Cla97C05G103160	Watermelon (97103) v2	carwmbB0878
Carg01928	Bhi07G000676	Wax gourd	carwgoB0979

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg01928	Silver-seed gourd	carcarB309
Carg01928	Silver-seed gourd	carcarB472
Carg01928	Silver-seed gourd	carcarB578
Carg01928	Cucumber (Gy14) v2	carcgybB0831
Carg01928	Cucurbita maxima (Rimu)	carcmaB1168
Carg01928	Cucurbita maxima (Rimu)	carcmaB1163
Carg01928	Cucurbita maxima (Rimu)	carcmaB1167
Carg01928	Cucurbita moschata (Rifu)	carcmoB1131
Carg01928	Cucurbita moschata (Rifu)	carcmoB1135
Carg01928	Cucurbita moschata (Rifu)	carcmoB1136
Carg01928	Cucurbita pepo (Zucchini)	carcpeB1169
Carg01928	Cucurbita pepo (Zucchini)	carcpeB1176
Carg01928	Bottle gourd (USVL1VR-Ls)	carlsiB769
Carg01928	Melon (DHL92) v3.5.1	carmeB0836
Carg01928	Melon (DHL92) v3.6.1	carmedB0848
Carg01928	Watermelon (Charleston Gray)	carwcgB0819
Carg01928	Watermelon (97103) v1	carwmB0838
Carg01928	Watermelon (97103) v2	carwmbB0881
Carg01928	Wax gourd	carwgoB0977