Carg01787 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg01787
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	F-box/FBD/LRR-repeat protein
Location	Cucurbita_argyrosperma_scaffold_003 : 437079 .. 438667 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGACATTTTGGGCATGGATCATTTAAGCGATCTGCCTCAGAGCATTATAGAATGCATTCTCACTAGGTTACCGATTAGAGATGCTATTAGAACCAGTGTTTTATCTAGGAGATGGAGATATAAGTGGAATACCCTTACTCAACTTGTGTTTGATGATGATTGTGTTGCCATGTCCAACGATGGAATTTATGAAGACCTTATATATTTTATCACTCATGTTCTTTTTCTTCATGAAGGTCCAATTCACAAGTTCCATCTTTCTGCTACCTACTTACAGAATACCCCAGATTTAGATCAGTGGATGCTTTTCCTTTCAAGGAAGGGCATCAGGGAATTGATTATTGAATTGGGAGACGGTGAGTGGTTTAGGGTTCATTCTTGTCTTTTTAACTGTAGTAAATTGACCCTATTGGAGCTGTATCGTTGTGAATTGGATCCACCTCCTACCTTTAAGGGATTCTTATGCTTGAAAAGCCTAAAGCTTCATCAAGTTCTGATTGCACCCGAAGACATTGAAAGTCTTATTGCTAATTGTCCACTCCTTGAGACTCTGGCGCTTTCCTACTTCGATAGTCTAGTCCTTAATATCTGTGCTCCCAATCTCAAGTACCTCTATCTTGAAGGCGAGTTTAGAGACATATGTCTCAAAAACACGCCACTCTTGGTTGCAATTTCGGTTGCATTATATATGAATGATGATACTGAGCCCTTTGGTGACAATTCTGATTGCAATTTTGAGAAGTTTTTTGGTGGGGTGCCTTATCTTGAGAAACTTACAGGGCATGTTTATTTCACCAAGGTACGATTGTTCAAATATATTTATTCCTTTGATGATATGTGCTTCTGTTGCATAGCTTTATTTATAACAGTTGGTTTGAAGAATTAAATGTGACTCTCATACCCCCTTCCCGCTTCCCCATAGTATCTGAGTATAGGTAATAGTGCCAGAACTCTACCGGTTTCACATATCTATTTAAGGAGTATTGAACTGCACCAAGTCAGTTTTGAAGATATGAATGAGATACTTGTTGTGCTTCGCTTGATTACCAGCTCTCCGAATTTGGAGGAGCTGCATGTTTCGGTAATTGTTTTTTTTTTCTTTCCATTCTTACCGTTTTTCTCTGCGGCTCTGTTCTTGAATCGGTGTGAACGTTCAAGTCATATTTTGATGAAGTTCGGAATGGTGACATCATTTTCAACTTGCTTTCAAACAGGGCTCCTCAAACCCTGTGGCTGCTTCAGAAGCACCTGACTTGGACTTTTGGGAGAATGAATGTCCTTCGAACTGTACATTTGGTAAACTTAAAGTTGTGAAAACGACAGACATGTCTGGTGTACCACACGAGATGGAATTTATTAAATATTTGCTTAGGAATTGTCCGGTGCTTGAGACAATGAGTATCAGACCTTGTGTCTATGTTACAGATCGACGATTGAATATGTTGATTGAACTGTTAAAATTTAGGAGGGCTTCACCTCAAGCAGAAATTTTGTTCATCCAAGAATAGTTATTCTAGTAATAAAGCTCCTTTTTCATTTTATACCTGCATTAATCTATAATTTTCTTCAGTAAATAGATAGCTT

mRNA sequence

ATGGGTGACATTTTGGGCATGGATCATTTAAGCGATCTGCCTCAGAGCATTATAGAATGCATTCTCACTAGGTTACCGATTAGAGATGCTATTAGAACCAGTGTTTTATCTAGGAGATGGAGATATAAGTGGAATACCCTTACTCAACTTGTGTTTGATGATGATTGTGTTGCCATGTCCAACGATGGAATTTATGAAGACCTTATATATTTTATCACTCATGTTCTTTTTCTTCATGAAGGTCCAATTCACAAGTTCCATCTTTCTGCTACCTACTTACAGAATACCCCAGATTTAGATCAGTGGATGCTTTTCCTTTCAAGGAAGGGCATCAGGGAATTGATTATTGAATTGGGAGACGGTGAGTGGTTTAGGGTTCATTCTTGTCTTTTTAACTGTAGTAAATTGACCCTATTGGAGCTGTATCGTTGTGAATTGGATCCACCTCCTACCTTTAAGGGATTCTTATGCTTGAAAAGCCTAAAGCTTCATCAAGTTCTGATTGCACCCGAAGACATTGAAAGTCTTATTGCTAATTGTCCACTCCTTGAGACTCTGGCGCTTTCCTACTTCGATAGTCTAGTCCTTAATATCTGTGCTCCCAATCTCAAGTACCTCTATCTTGAAGGCGAGTTTAGAGACATATGTCTCAAAAACACGCCACTCTTGGTTGCAATTTCGGTTGCATTATATATGAATGATGATACTGAGCCCTTTGGTGACAATTCTGATTGCAATTTTGAGAAGTTTTTTGGTGGGGTGCCTTATCTTGAGAAACTTACAGGGCATGTTTATTTCACCAAGTATCTGAGTATAGGTAATAGTGCCAGAACTCTACCGGTTTCACATATCTATTTAAGGAGTATTGAACTGCACCAAGTCAGTTTTGAAGATATGAATGAGATACTTGTTGTGCTTCGCTTGATTACCAGCTCTCCGAATTTGGAGGAGCTGCATGTTTCGGGCTCCTCAAACCCTGTGGCTGCTTCAGAAGCACCTGACTTGGACTTTTGGGAGAATGAATGTCCTTCGAACTGTACATTTGGTAAACTTAAAGTTGTGAAAACGACAGACATGTCTGGTGTACCACACGAGATGGAATTTATTAAATATTTGCTTAGGAATTGTCCGGTGCTTGAGACAATGAGTATCAGACCTTGTGTCTATGTTACAGATCGACGATTGAATATGTTGATTGAACTGTTAAAATTTAGGAGGGCTTCACCTCAAGCAGAAATTTTGTTCATCCAAGAATAGTTATTCTAGTAATAAAGCTCCTTTTTCATTTTATACCTGCATTAATCTATAATTTTCTTCAGTAAATAGATAGCTT

Coding sequence (CDS)

ATGGGTGACATTTTGGGCATGGATCATTTAAGCGATCTGCCTCAGAGCATTATAGAATGCATTCTCACTAGGTTACCGATTAGAGATGCTATTAGAACCAGTGTTTTATCTAGGAGATGGAGATATAAGTGGAATACCCTTACTCAACTTGTGTTTGATGATGATTGTGTTGCCATGTCCAACGATGGAATTTATGAAGACCTTATATATTTTATCACTCATGTTCTTTTTCTTCATGAAGGTCCAATTCACAAGTTCCATCTTTCTGCTACCTACTTACAGAATACCCCAGATTTAGATCAGTGGATGCTTTTCCTTTCAAGGAAGGGCATCAGGGAATTGATTATTGAATTGGGAGACGGTGAGTGGTTTAGGGTTCATTCTTGTCTTTTTAACTGTAGTAAATTGACCCTATTGGAGCTGTATCGTTGTGAATTGGATCCACCTCCTACCTTTAAGGGATTCTTATGCTTGAAAAGCCTAAAGCTTCATCAAGTTCTGATTGCACCCGAAGACATTGAAAGTCTTATTGCTAATTGTCCACTCCTTGAGACTCTGGCGCTTTCCTACTTCGATAGTCTAGTCCTTAATATCTGTGCTCCCAATCTCAAGTACCTCTATCTTGAAGGCGAGTTTAGAGACATATGTCTCAAAAACACGCCACTCTTGGTTGCAATTTCGGTTGCATTATATATGAATGATGATACTGAGCCCTTTGGTGACAATTCTGATTGCAATTTTGAGAAGTTTTTTGGTGGGGTGCCTTATCTTGAGAAACTTACAGGGCATGTTTATTTCACCAAGTATCTGAGTATAGGTAATAGTGCCAGAACTCTACCGGTTTCACATATCTATTTAAGGAGTATTGAACTGCACCAAGTCAGTTTTGAAGATATGAATGAGATACTTGTTGTGCTTCGCTTGATTACCAGCTCTCCGAATTTGGAGGAGCTGCATGTTTCGGGCTCCTCAAACCCTGTGGCTGCTTCAGAAGCACCTGACTTGGACTTTTGGGAGAATGAATGTCCTTCGAACTGTACATTTGGTAAACTTAAAGTTGTGAAAACGACAGACATGTCTGGTGTACCACACGAGATGGAATTTATTAAATATTTGCTTAGGAATTGTCCGGTGCTTGAGACAATGAGTATCAGACCTTGTGTCTATGTTACAGATCGACGATTGAATATGTTGATTGAACTGTTAAAATTTAGGAGGGCTTCACCTCAAGCAGAAATTTTGTTCATCCAAGAATAG

Protein sequence

MGDILGMDHLSDLPQSIIECILTRLPIRDAIRTSVLSRRWRYKWNTLTQLVFDDDCVAMSNDGIYEDLIYFITHVLFLHEGPIHKFHLSATYLQNTPDLDQWMLFLSRKGIRELIIELGDGEWFRVHSCLFNCSKLTLLELYRCELDPPPTFKGFLCLKSLKLHQVLIAPEDIESLIANCPLLETLALSYFDSLVLNICAPNLKYLYLEGEFRDICLKNTPLLVAISVALYMNDDTEPFGDNSDCNFEKFFGGVPYLEKLTGHVYFTKYLSIGNSARTLPVSHIYLRSIELHQVSFEDMNEILVVLRLITSSPNLEELHVSGSSNPVAASEAPDLDFWENECPSNCTFGKLKVVKTTDMSGVPHEMEFIKYLLRNCPVLETMSIRPCVYVTDRRLNMLIELLKFRRASPQAEILFIQE

Homology

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BLAST of Carg01787 vs. NCBI nr
Match: XP_022979919.1 (F-box/FBD/LRR-repeat protein At1g13570-like [Cucurbita maxima])

HSP 1 Score: 858.2 bits (2216), Expect = 1.2e-245
Identity = 417/418 (99.76%), Postives = 418/418 (100.00%), Query Frame = 0


Query: 1   MGDILGMDHLSDLPQSIIECILTRLPIRDAIRTSVLSRRWRYKWNTLTQLVFDDDCVAMS 60
           MGDILG+DHLSDLPQSIIECILTRLPIRDAIRTSVLSRRWRYKWNTLTQLVFDDDCVAMS
Sbjct: 1   MGDILGVDHLSDLPQSIIECILTRLPIRDAIRTSVLSRRWRYKWNTLTQLVFDDDCVAMS 60

Query: 61  NDGIYEDLIYFITHVLFLHEGPIHKFHLSATYLQNTPDLDQWMLFLSRKGIRELIIELGD 120
           NDGIYEDLIYFITHVLFLHEGPIHKFHLSATYLQNTPDLDQWMLFLSRKGIRELIIELGD
Sbjct: 61  NDGIYEDLIYFITHVLFLHEGPIHKFHLSATYLQNTPDLDQWMLFLSRKGIRELIIELGD 120

Query: 121 GEWFRVHSCLFNCSKLTLLELYRCELDPPPTFKGFLCLKSLKLHQVLIAPEDIESLIANC 180
           GEWFRVHSCLFNCSKLTLLELYRCELDPPPTFKGFLCLKSLKLHQVLIAPEDIESLIANC
Sbjct: 121 GEWFRVHSCLFNCSKLTLLELYRCELDPPPTFKGFLCLKSLKLHQVLIAPEDIESLIANC 180

Query: 181 PLLETLALSYFDSLVLNICAPNLKYLYLEGEFRDICLKNTPLLVAISVALYMNDDTEPFG 240
           PLLETLALSYFDSLVLNICAPNLKYLYLEGEFRDICLKNTPLLVAISVALYMNDDTEPFG
Sbjct: 181 PLLETLALSYFDSLVLNICAPNLKYLYLEGEFRDICLKNTPLLVAISVALYMNDDTEPFG 240

Query: 241 DNSDCNFEKFFGGVPYLEKLTGHVYFTKYLSIGNSARTLPVSHIYLRSIELHQVSFEDMN 300
           DNSDCNFEKFFGGVPYLEKLTGHVYFTKYLSIGNSARTLPVSHIYLRSIELHQVSFEDMN
Sbjct: 241 DNSDCNFEKFFGGVPYLEKLTGHVYFTKYLSIGNSARTLPVSHIYLRSIELHQVSFEDMN 300

Query: 301 EILVVLRLITSSPNLEELHVSGSSNPVAASEAPDLDFWENECPSNCTFGKLKVVKTTDMS 360
           EILVVLRLITSSPNLEELHVSGSSNPVAASEAPDLDFWENECPSNCTFGKLKVVKTTDMS
Sbjct: 301 EILVVLRLITSSPNLEELHVSGSSNPVAASEAPDLDFWENECPSNCTFGKLKVVKTTDMS 360

Query: 361 GVPHEMEFIKYLLRNCPVLETMSIRPCVYVTDRRLNMLIELLKFRRASPQAEILFIQE 419
           GVPHEMEFIKYLLRNCPVLETMSIRPCVYVTDRRLNMLIELLKFRRASPQAEILFIQE
Sbjct: 361 GVPHEMEFIKYLLRNCPVLETMSIRPCVYVTDRRLNMLIELLKFRRASPQAEILFIQE 418

[Close]

BLAST of Carg01787 vs. NCBI nr
Match: XP_023511542.1 (F-box/FBD/LRR-repeat protein At1g13570-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 858.2 bits (2216), Expect = 1.2e-245
Identity = 416/418 (99.52%), Postives = 418/418 (100.00%), Query Frame = 0


Query: 1   MGDILGMDHLSDLPQSIIECILTRLPIRDAIRTSVLSRRWRYKWNTLTQLVFDDDCVAMS 60
           MGDILGMDHLSDLPQSIIECILTRLPIRDAIRTS+LSRRWRYKWNTLTQLVFDDDCVAMS
Sbjct: 1   MGDILGMDHLSDLPQSIIECILTRLPIRDAIRTSILSRRWRYKWNTLTQLVFDDDCVAMS 60

Query: 61  NDGIYEDLIYFITHVLFLHEGPIHKFHLSATYLQNTPDLDQWMLFLSRKGIRELIIELGD 120
           NDGIYEDLIYFITHVLFLHEGPIHKFHLSATYLQNTPDLDQWMLFLSRKGIRELIIELGD
Sbjct: 61  NDGIYEDLIYFITHVLFLHEGPIHKFHLSATYLQNTPDLDQWMLFLSRKGIRELIIELGD 120

Query: 121 GEWFRVHSCLFNCSKLTLLELYRCELDPPPTFKGFLCLKSLKLHQVLIAPEDIESLIANC 180
           GEWFRVHSCLFNCSKLTLLELYRCELDPPPTFKGFLCLKSLKLHQVLIAPEDIESLIANC
Sbjct: 121 GEWFRVHSCLFNCSKLTLLELYRCELDPPPTFKGFLCLKSLKLHQVLIAPEDIESLIANC 180

Query: 181 PLLETLALSYFDSLVLNICAPNLKYLYLEGEFRDICLKNTPLLVAISVALYMNDDTEPFG 240
           PLLETLALSYFDSLVLNICAPNLKYLYLEGEFRDICLKNTPLLVAISVALYMNDDTEPFG
Sbjct: 181 PLLETLALSYFDSLVLNICAPNLKYLYLEGEFRDICLKNTPLLVAISVALYMNDDTEPFG 240

Query: 241 DNSDCNFEKFFGGVPYLEKLTGHVYFTKYLSIGNSARTLPVSHIYLRSIELHQVSFEDMN 300
           DNSDCNFEKFFGGVPYLEKLTGHVYFTKYLSIGNSARTLPVSHIYLRSIELHQVSFEDMN
Sbjct: 241 DNSDCNFEKFFGGVPYLEKLTGHVYFTKYLSIGNSARTLPVSHIYLRSIELHQVSFEDMN 300

Query: 301 EILVVLRLITSSPNLEELHVSGSSNPVAASEAPDLDFWENECPSNCTFGKLKVVKTTDMS 360
           EILVVLRLITSSPNLEELHVSGSSNPVAASEAPDLDFWENECPSNCTFGKLKVVKTTDMS
Sbjct: 301 EILVVLRLITSSPNLEELHVSGSSNPVAASEAPDLDFWENECPSNCTFGKLKVVKTTDMS 360

Query: 361 GVPHEMEFIKYLLRNCPVLETMSIRPCVYVTDRRLNMLIELLKFRRASPQAEILFIQE 419
           GVPHEMEFIKYLLRNCPVLETMSIRPCVYVTDRRLNMLIELL+FRRASPQAEILFIQE
Sbjct: 361 GVPHEMEFIKYLLRNCPVLETMSIRPCVYVTDRRLNMLIELLRFRRASPQAEILFIQE 418

[Close]

BLAST of Carg01787 vs. NCBI nr
Match: XP_022957268.1 (F-box/FBD/LRR-repeat protein At1g13570-like [Cucurbita moschata])

HSP 1 Score: 855.1 bits (2208), Expect = 9.7e-245
Identity = 415/418 (99.28%), Postives = 417/418 (99.76%), Query Frame = 0


Query: 1   MGDILGMDHLSDLPQSIIECILTRLPIRDAIRTSVLSRRWRYKWNTLTQLVFDDDCVAMS 60
           MGDILG+DHLSDLPQSIIECILTRLPIRDAIRTSVLSRRWRYKWNTLTQLVFDDDCVAMS
Sbjct: 1   MGDILGVDHLSDLPQSIIECILTRLPIRDAIRTSVLSRRWRYKWNTLTQLVFDDDCVAMS 60

Query: 61  NDGIYEDLIYFITHVLFLHEGPIHKFHLSATYLQNTPDLDQWMLFLSRKGIRELIIELGD 120
           NDGIYEDLIYFITHVLFLHEGPIHKFHLSATYLQNTPDLDQWMLFLSRKGIRELIIELGD
Sbjct: 61  NDGIYEDLIYFITHVLFLHEGPIHKFHLSATYLQNTPDLDQWMLFLSRKGIRELIIELGD 120

Query: 121 GEWFRVHSCLFNCSKLTLLELYRCELDPPPTFKGFLCLKSLKLHQVLIAPEDIESLIANC 180
           GEWFRVHSCLFNCSKLTLLELYRCELDPPPTFKGFLCLKSLKLHQVLIAPEDIESLIANC
Sbjct: 121 GEWFRVHSCLFNCSKLTLLELYRCELDPPPTFKGFLCLKSLKLHQVLIAPEDIESLIANC 180

Query: 181 PLLETLALSYFDSLVLNICAPNLKYLYLEGEFRDICLKNTPLLVAISVALYMNDDTEPFG 240
           PLLETLALSYFDSLVLNICAPNLKYLYLEGEFRDICLKNTPLLVAISVALYMNDDTEPFG
Sbjct: 181 PLLETLALSYFDSLVLNICAPNLKYLYLEGEFRDICLKNTPLLVAISVALYMNDDTEPFG 240

Query: 241 DNSDCNFEKFFGGVPYLEKLTGHVYFTKYLSIGNSARTLPVSHIYLRSIELHQVSFEDMN 300
           DNSDCNFEKFFGGVPYLEKLTGHVYFTKYLSIGNSARTLPVSHIYLRSIELHQVSFEDMN
Sbjct: 241 DNSDCNFEKFFGGVPYLEKLTGHVYFTKYLSIGNSARTLPVSHIYLRSIELHQVSFEDMN 300

Query: 301 EILVVLRLITSSPNLEELHVSGSSNPVAASEAPDLDFWENECPSNCTFGKLKVVKTTDMS 360
           EILVVLRLITSSPNLEELHVSGSSNPVAASEAPDLDFWENECPSNCTFGKLKVVKTTDMS
Sbjct: 301 EILVVLRLITSSPNLEELHVSGSSNPVAASEAPDLDFWENECPSNCTFGKLKVVKTTDMS 360

Query: 361 GVPHEMEFIKYLLRNCPVLETMSIRPCVYVTDRRLNMLIELLKFRRASPQAEILFIQE 419
           GVPHEMEFIKYLLRNCPVLETMSIRPCVYVTDRRLNMLIELL+FRRASP AEILFIQE
Sbjct: 361 GVPHEMEFIKYLLRNCPVLETMSIRPCVYVTDRRLNMLIELLRFRRASPHAEILFIQE 418

[Close]

BLAST of Carg01787 vs. NCBI nr
Match: XP_008446506.1 (PREDICTED: LOW QUALITY PROTEIN: F-box/FBD/LRR-repeat protein At1g13570-like [Cucumis melo])

HSP 1 Score: 818.5 bits (2113), Expect = 1.0e-233
Identity = 394/418 (94.26%), Postives = 410/418 (98.09%), Query Frame = 0


Query: 1   MGDILGMDHLSDLPQSIIECILTRLPIRDAIRTSVLSRRWRYKWNTLTQLVFDDDCVAMS 60
           MGD+LG+DHLSDLPQSIIECILTRLPIRDAIRTS+LSRRWRYKW TLTQLVFDDDCVAMS
Sbjct: 1   MGDVLGVDHLSDLPQSIIECILTRLPIRDAIRTSILSRRWRYKWTTLTQLVFDDDCVAMS 60

Query: 61  NDGIYEDLIYFITHVLFLHEGPIHKFHLSATYLQNTPDLDQWMLFLSRKGIRELIIELGD 120
           NDGIYEDLIYFITHVL LHEGPIHKFHLSATYLQNTPDLDQW+LFLSRKGIRELIIELGD
Sbjct: 61  NDGIYEDLIYFITHVLXLHEGPIHKFHLSATYLQNTPDLDQWLLFLSRKGIRELIIELGD 120

Query: 121 GEWFRVHSCLFNCSKLTLLELYRCELDPPPTFKGFLCLKSLKLHQVLIAPEDIESLIANC 180
           GEWFRVHSCLFNCSKLTLLELYRCELDPPPTFKGFLCLKSLKLHQVLIAPEDIESLI+NC
Sbjct: 121 GEWFRVHSCLFNCSKLTLLELYRCELDPPPTFKGFLCLKSLKLHQVLIAPEDIESLISNC 180

Query: 181 PLLETLALSYFDSLVLNICAPNLKYLYLEGEFRDICLKNTPLLVAISVALYMNDDTEPFG 240
           PLLE+LALSYFDSLVLNICAPNLKYLYLEGEFRDICL+NTPLLV+ISVALYMND++EPFG
Sbjct: 181 PLLESLALSYFDSLVLNICAPNLKYLYLEGEFRDICLQNTPLLVSISVALYMNDESEPFG 240

Query: 241 DNSDCNFEKFFGGVPYLEKLTGHVYFTKYLSIGNSARTLPVSHIYLRSIELHQVSFEDMN 300
           D SDCN+EKF GGVPYLEKLTGHVYFTKYLSIGNSARTLPVS+IYL+SIELHQVSFEDMN
Sbjct: 241 DISDCNYEKFLGGVPYLEKLTGHVYFTKYLSIGNSARTLPVSYIYLKSIELHQVSFEDMN 300

Query: 301 EILVVLRLITSSPNLEELHVSGSSNPVAASEAPDLDFWENECPSNCTFGKLKVVKTTDMS 360
           EILVVLRLITSSPNLEEL +SGSSNPVAASEAPDLDFWENECPSN TFGKL+VVK TDMS
Sbjct: 301 EILVVLRLITSSPNLEELQISGSSNPVAASEAPDLDFWENECPSNLTFGKLRVVKATDMS 360

Query: 361 GVPHEMEFIKYLLRNCPVLETMSIRPCVYVTDRRLNMLIELLKFRRASPQAEILFIQE 419
           GVPHEMEFIKYLLRNCPVLE MSIRPCVYVTDRRLNMLIELLKFRRASP+AEILFIQE
Sbjct: 361 GVPHEMEFIKYLLRNCPVLEIMSIRPCVYVTDRRLNMLIELLKFRRASPEAEILFIQE 418

[Close]

BLAST of Carg01787 vs. NCBI nr
Match: XP_004135131.1 (PREDICTED: F-box/FBD/LRR-repeat protein At1g13570 [Cucumis sativus] >KGN52016.1 hypothetical protein Csa_5G608040 [Cucumis sativus])

HSP 1 Score: 817.8 bits (2111), Expect = 1.7e-233
Identity = 392/418 (93.78%), Postives = 410/418 (98.09%), Query Frame = 0


Query: 1   MGDILGMDHLSDLPQSIIECILTRLPIRDAIRTSVLSRRWRYKWNTLTQLVFDDDCVAMS 60
           MGD+LG+DHLSDLPQSIIECILTRLPIRDAIRTS+LSRRWRYKW TLTQLVFDDDCVAMS
Sbjct: 1   MGDVLGVDHLSDLPQSIIECILTRLPIRDAIRTSILSRRWRYKWTTLTQLVFDDDCVAMS 60

Query: 61  NDGIYEDLIYFITHVLFLHEGPIHKFHLSATYLQNTPDLDQWMLFLSRKGIRELIIELGD 120
           NDGIYEDLIYFITHVLFLHEGPIHKFHLSATYLQNTPDLDQW+LFLSRKGIRELIIELGD
Sbjct: 61  NDGIYEDLIYFITHVLFLHEGPIHKFHLSATYLQNTPDLDQWLLFLSRKGIRELIIELGD 120

Query: 121 GEWFRVHSCLFNCSKLTLLELYRCELDPPPTFKGFLCLKSLKLHQVLIAPEDIESLIANC 180
           GEWFRVHSCLFNCSKLTLLELYRCELDPPPTFKGFLCLKSLKLHQVLIAPEDIESLI+NC
Sbjct: 121 GEWFRVHSCLFNCSKLTLLELYRCELDPPPTFKGFLCLKSLKLHQVLIAPEDIESLISNC 180

Query: 181 PLLETLALSYFDSLVLNICAPNLKYLYLEGEFRDICLKNTPLLVAISVALYMNDDTEPFG 240
           PLLE+LALSYFDSLVLNICAPNLKYLYLEGEFRDICL+NTPLLV+ISVALYMND++EPFG
Sbjct: 181 PLLESLALSYFDSLVLNICAPNLKYLYLEGEFRDICLQNTPLLVSISVALYMNDESEPFG 240

Query: 241 DNSDCNFEKFFGGVPYLEKLTGHVYFTKYLSIGNSARTLPVSHIYLRSIELHQVSFEDMN 300
           D SDCN+EKF GGVPYLEKLTGHVYFTKYLSIGNSAR +P+S+IYL+SIELHQVSFEDMN
Sbjct: 241 DLSDCNYEKFLGGVPYLEKLTGHVYFTKYLSIGNSARKMPISYIYLKSIELHQVSFEDMN 300

Query: 301 EILVVLRLITSSPNLEELHVSGSSNPVAASEAPDLDFWENECPSNCTFGKLKVVKTTDMS 360
           EILVVLRLITSSPNLEEL +SGSSNPVAASEAPDLDFWENECPSN TFGKL+VVK TDMS
Sbjct: 301 EILVVLRLITSSPNLEELQISGSSNPVAASEAPDLDFWENECPSNLTFGKLRVVKATDMS 360

Query: 361 GVPHEMEFIKYLLRNCPVLETMSIRPCVYVTDRRLNMLIELLKFRRASPQAEILFIQE 419
           GVPHEMEFIKYLLRNCPVLE MSIRPCVYVTDRRLNMLIELLKFRRASP+AEILFIQE
Sbjct: 361 GVPHEMEFIKYLLRNCPVLEIMSIRPCVYVTDRRLNMLIELLKFRRASPEAEILFIQE 418

[Close]

BLAST of Carg01787 vs. TAIR10
Match: AT1G13570.1 (F-box/RNI-like superfamily protein)

HSP 1 Score: 434.5 bits (1116), Expect = 7.4e-122
Identity = 225/413 (54.48%), Postives = 295/413 (71.43%), Query Frame = 0


Query: 8   DHLSDLPQSIIECILTRLPIRDAIRTSVLSRRWRYKWNTLTQLVFDDDCVAMSNDG--IY 67
           D +SDLPQSIIE I                       +TLT LVFD+ CV+ SND   + 
Sbjct: 6   DFISDLPQSIIENIXXXXXXXXXXXXXXXXXXXXXXXSTLTDLVFDEKCVSPSNDRCVVE 65

Query: 68  EDLIYFITHVLFLHEGPIHKFHLSATYLQNTPDLDQWMLFLSRKGIRELIIELGDGEWFR 127
            +L+ FIT VL LH+GPIHKF LS ++ Q  PD+DQW+LFLSR GI+EL+++LG+GE FR
Sbjct: 66  TNLVRFITGVLLLHQGPIHKFQLSTSFKQCRPDIDQWLLFLSRNGIKELVLKLGEGE-FR 125

Query: 128 VHSCLFNCSKLTLLELYRCELDPPPTFKGFLCLKSLKLHQVLIAPEDIESLIANCPLLET 187
           V +CLFNC KLT LEL  CE DPP  FKGF  LKSL LHQ+L+APE IESLI+ CPLLE 
Sbjct: 126 VPACLFNCLKLTCLELCHCEFDPPQYFKGFSYLKSLNLHQILVAPEVIESLISGCPLLEF 185

Query: 188 LALSYFDSLVLNICAPNLKYLYLEGEFRDICLKNTPLLVAISVALYMNDDTEPFGDNSDC 247
           L+LSYFDSLVL+I APNL YLYL+GEF+DI L+NTP LVAISV++YM++D   F  +SD 
Sbjct: 186 LSLSYFDSLVLSISAPNLMYLYLDGEFKDIFLENTPKLVAISVSMYMHEDVTDFEQSSDY 245

Query: 248 NFEKFFGGVPYLEKLTGHVYFTKYLSIGNSARTLPVSHIYLRSIELHQVSFEDMNEILVV 307
           N  KF GGVP LEKL G++YFTKYLSIG+    LP+++I+L++IEL+QV FED +E+LV+
Sbjct: 246 NLVKFLGGVPLLEKLVGYIYFTKYLSIGDDPGRLPLTYIHLKTIELYQVCFEDADEVLVL 305

Query: 308 LRLITSSPNLEELHVSGSSNPVAASEAPDLDFWENECPSNCTFGKLKVVKTTDMSGVPHE 367
           LRL+T SPNL+EL VS S       E    D +E +   +     L+ VK TD SG+ +E
Sbjct: 306 LRLVTHSPNLKELKVSASPVQPFPLEEEGFDLFERDY-FDYKLPSLESVKITDASGIRYE 365

Query: 368 MEFIKYLLRNCPVLETMSIRPCVYVTDRRLNMLIELLKFRRASPQAEILFIQE 419
           +EFI++LL   PVLET+++   +   D +++M+IELL++ R SP+A++LF+Q+
Sbjct: 366 LEFIRFLLGTSPVLETVTVSSSLSDKDAKMDMVIELLRYPRVSPRAQLLFLQD 416

[Close]

BLAST of Carg01787 vs. TAIR10
Match: AT1G32375.1 (F-box/RNI-like/FBD-like domains-containing protein)

HSP 1 Score: 107.8 bits (268), Expect = 1.6e-23
Identity = 115/438 (26.26%), Postives = 190/438 (43.38%), Query Frame = 0


Query: 7   MDHLSDLPQSIIECILTRLPIRDAIRTSVLSRRWRYKWNTLTQLVFDDDCVAMSNDGIYE 66
           MD LS LP++++  IL+ L  +D + T VLS+RW++ W  + +L++DD   A+     Y 
Sbjct: 1   MDKLSQLPEALLVRILSLLSAKDVVSTMVLSKRWQFLWMLVPKLIYDDSYQAIE----YG 60

Query: 67  DLIYFITHVLFLHEGPI---HKFHLSATYLQNTPDLDQWMLFLSRKGIRELIIEL----G 126
               F+     LH+  +     F L  T    T D+  W+    +  +RELIIE+     
Sbjct: 61  SFSRFVDRSFTLHDAQVLDTLHFKLGKTSC-GTGDIRVWIKTAEKSCLRELIIEIDKSNS 120

Query: 127 DGEWFRVHSCLFNCSK-LTLLELYRCELDPPPTFKGFLCLKSLKLHQVLIAPED-IESLI 186
           D     +   L+ C + L  L+L    L    +   F  LK+L L  +    ++ I+ L+
Sbjct: 121 DNSSVVLPRSLYTCCRMLVTLKLNNAVLVDATSSFSFPSLKTLSLVSMKFPGDELIKMLL 180

Query: 187 ANCPLLETLALS---YFDSLVLNICAPNLKYLYL-EGEFRDI-----CLKNTPLLVAISV 246
           +NCP+LE L +    Y +     +   +LK L L E E   I      + +TP L  + +
Sbjct: 181 SNCPVLEDLVVKRCPYDNVTTFTVRVSSLKCLVLHETELASINADCGFVIDTPSLECLDI 240

Query: 247 -------ALYMNDDTEPFGDNSDCNFEKFFGGVPYLEKLTGHVYFTK--YLSIGNSARTL 306
                   +  N+ T+    N  CN         + ++L G +   K  Y+ I +S    
Sbjct: 241 EDGRGGFCVIENNMTKVVKANV-CN------SYVHTQQLMGSISSVKRLYVCIPSSKDAY 300

Query: 307 PVSHIY--LRSIELHQVSFEDMNEILVVLRLITSSPNLEELHVSGSSNPVAASEAPDLDF 366
           PV  ++  L  + +     E +N ++ VLR    SP L EL +    N V  S  P   +
Sbjct: 301 PVGSVFHCLVRLTICTCETEWLNLLMCVLR---DSPKLRELKL--VKNHVYRSHQPRPCW 360

Query: 367 WENECPSNCTFGKLKVVKTTDMSGVPHEMEFIKYLLRNCPVLETMSIRPCVYVTDRRLNM 416
            E      C    L+ ++     G   E E   ++LR+   L+ ++I       +++  M
Sbjct: 361 NEPSAVPECLLTSLETLEWVKYEGTEEEKEVAAFILRSGSCLKKVTISSKSTDINKKFEM 420

[Close]

BLAST of Carg01787 vs. TAIR10
Match: AT5G56370.1 (F-box/RNI-like/FBD-like domains-containing protein)

HSP 1 Score: 107.8 bits (268), Expect = 1.6e-23
Identity = 109/445 (24.49%), Postives = 187/445 (42.02%), Query Frame = 0


Query: 7   MDHLSDLPQSIIECILTRLPIRDAIRTSVLSRRWRYKWNTLTQLVFDDDCVAMSNDGIYE 66
           MD +S LP   +  IL+ LP +D + TSVLS+RWRY W  + +L +      +  +  + 
Sbjct: 1   MDSISLLPDDFLLRILSLLPTKDVLNTSVLSKRWRYLWKLVPKLQYS----LIDKNADHG 60

Query: 67  DLIYFITHVLFLHEGPI-HKFHLSATYLQNTPDLDQWMLFLSRKGIRELIIELGDGEWFR 126
             + F+   L L   P+    HL      +  D+  W+     KG+ EL     D E ++
Sbjct: 61  TFVRFVDRSLLLSMAPVLESLHLKLGRQCSEVDIGFWVRIAVEKGLCELDF---DYEHYK 120

Query: 127 VHSC-----LFNCSKLTLLELYRCELDPPPTFKGFLCLKSLKLHQVL-IAPEDIESLIAN 186
              C     LF C  LT+L+L    L        F  LK+L L  V+ +  E  + L+++
Sbjct: 121 TEPCRLPQSLFTCGTLTVLKLKNVSLKDVQFPVCFKLLKTLHLEYVIFLDKETPQKLLSS 180

Query: 187 CPLLETLALSYFDSLVLNICA-----PNL-KYLYLEGEFRDICLKNTPLLVAISVALYMN 246
           CP+LE   L+  D  V N+ +     P+L +++Y  G   ++ + NTP L  + +     
Sbjct: 181 CPILEVFDLTRDDDDVDNVMSFSVMVPSLQRFIYCGGSGAELVM-NTPSLKYLKL----- 240

Query: 247 DDTEPFGDNSDCNFEKFFGGVPYLEKLTGHV--------YFTKYLSIGNSARTLPVSHIY 306
                    S C +E   G +P  E +  HV          T   S+      LP     
Sbjct: 241 ---------SGCGYECMIGNLP--EIVEAHVEVACSTDDILTSLASVKRLLLCLPTEPEL 300

Query: 307 LRSIELHQVSFEDM----NEILVVLRLITSSPNLEELHVSGSSNPVAASEAPDLDFWE-- 366
                 HQ+   +      E  +++ ++  SP L  L ++ +      S++  +  WE  
Sbjct: 301 PTGTIFHQLEHLEFCSCCTEWDILMFMLKHSPKLRSLKLNETHGYTIVSQSDPMFHWEEP 360

Query: 367 NECPSNCTFGKLKVVKTTDMSGVPHEMEFIKYLLRNCPVLETMSIRP--CVYV------- 416
           +  P    F  L+ ++  +  G+  E E   +LL++   L+  +  P  C  V       
Sbjct: 361 SSVPETLMF-VLETLEWRNYRGLKMENELASFLLKHSRRLKIATFSPADCKQVRIELRTT 420

[Close]

BLAST of Carg01787 vs. TAIR10
Match: AT5G56420.1 (F-box/RNI-like/FBD-like domains-containing protein)

HSP 1 Score: 103.2 bits (256), Expect = 3.9e-22
Identity = 113/438 (25.80%), Postives = 182/438 (41.55%), Query Frame = 0


Query: 8   DHLSDLPQSIIECILTRLPIRDAIRTSVLSRRWRYKWNTLTQLVFDDDCVAMSNDGIYED 67
           D LS LP   +  IL+ LP +D + TS+LS+RWR+ W  + +L +D       +D     
Sbjct: 6   DRLSQLPDDFLLQILSWLPTKDVLVTSLLSKRWRFLWTLVPRLNYD----LRLHDNTCPR 65

Query: 68  LIYFITHVLFLHEGPIHK---FHLSATYLQNTPDLDQWMLFLSRKGIRELIIELGDGEW- 127
              F+   L LH+ P  +     + +       D+  W+     + +REL +    GE  
Sbjct: 66  FSQFVDRSLLLHKAPTLESLNIKIGSICFTAEKDVGVWVRIGVDRFVRELSVSYCSGEEP 125

Query: 128 FRVHSCLFNCSKLTLLELYRCELDPPPTFKGFLCLKSLKLHQV-LIAPEDIESLIANCPL 187
            R+  CLF CS L +L+L    L+    +  F  LK+L L  V  +  + +  +I++C  
Sbjct: 126 IRLPKCLFTCSTLAVLKLENITLEDASCYVCFQSLKTLHLLDVKYLDDQSLPRIISSCSS 185

Query: 188 LETLALSYF---DSLVLNICAPNLKYLYL-------EGEFRDICLKNTPLLVAISVA--- 247
           LE L +      +  V+ + AP+LK L L       EG+  D  L +TP L  + +    
Sbjct: 186 LEDLVVQRCPGDNVKVVTVTAPSLKTLSLHKSSQAFEGD-DDGFLIDTPKLKRVDIEDYW 245

Query: 248 ---LYMNDDTEPFGDNSDC---NFEKFFGGVPYLEKLTGHVYFTKYLSIGNSARTLPVSH 307
               Y+ +  E    N D    N EK  G +  +++L         L +  S    P   
Sbjct: 246 GGFCYIENMPEVVEANVDVIYKNTEKLLGSITSVKRLA--------LCLITSDAAYPAGT 305

Query: 308 IYLRSIELHQVSFEDMNEILVVLRLITSSPNLEEL-----HVSGSSNPVAASEAPDLDFW 367
           I+ + + L   +       L+  RLI  SP L  L     H+  + +P A+        W
Sbjct: 306 IFSQLVHLELCTCAPRWWDLLT-RLIEDSPKLRVLKLRQKHIRRAPSPRAS--------W 365

Query: 368 ENECPSNCTFGKLKVVKTTDMSGVPHEMEFIKYLLRNCPVLETMSIRPCVYVT-DRRLNM 416
           +      C    L+  K     G   + E   ++L++   L+T  I P    T   +  M
Sbjct: 366 KQPALPKCLLFHLETFKWELYEGSQKQKEVATFILKHAIRLKTAIISPKPTSTLLEKHEM 421

[Close]

BLAST of Carg01787 vs. TAIR10
Match: AT4G00315.1 (F-box/RNI-like/FBD-like domains-containing protein)

HSP 1 Score: 102.8 bits (255), Expect = 5.1e-22
Identity = 117/439 (26.65%), Postives = 198/439 (45.10%), Query Frame = 0


Query: 7   MDHLSDLPQSIIECILTRLPIRDAIRTSVLSRRWRYKWNTLTQLVFDDDCVAMSNDGIYE 66
           MD  S LP  ++  +L+ LP +DA+RTS+LS RW+  W  L +L +D    ++S     +
Sbjct: 1   MDKTSQLPDELLVKVLSFLPTKDAVRTSLLSMRWKSLWMWLPKLEYDFRHYSVSEG---Q 60

Query: 67  DLIYFITHVLFLHEGP-IHKFHLSATY----LQNTPDLDQWM-LFLSRKGIRELIIELGD 126
            L  FIT  L  H+ P I    L   Y         D+  W+ L +    +REL ++L  
Sbjct: 61  GLARFITLSLLGHKAPAIESLSLKLRYGAIGSIKPEDIYLWVSLAVHDSNVRELSLKLCT 120

Query: 127 --GEWFRVHSCLFNCSKLTLLELYRCELDPPPTFKGFLCLKSLKLHQVLIAPED-IESLI 186
                 ++   L+ C  + +L+L    L   P       LK+L L +V  + ED +  L+
Sbjct: 121 FAERPTKLPKSLYKCKSIVILKLKDEILVDVPRKVCLPSLKTLFLGRVTYSDEDSLHRLL 180

Query: 187 ANCPLLETLAL--SYFDSL-VLNICAPNLKYLYLEGE---FRDICLKNTPLLVAISVA-- 246
           +NCP+LE L +     D+L  L++   +L+ L L+       D  + NTP L  + V   
Sbjct: 181 SNCPVLEDLVVERDRIDNLGKLSVVVKSLQRLTLKMSCPCHLDGIMMNTPSLKYLKVTDE 240

Query: 247 ----------------LYMNDDTEPFGDNSDC-----NFEKFFGGVPYLEKLTGHVYFTK 306
                            + + +  P  + +D      N +KFF  V  +++L+       
Sbjct: 241 RQEXXXXXXXXXXXXRYFYDFEDMPKLEEADFVLTFQNIKKFFKFVTSIKRLS------- 300

Query: 307 YLSIG-NSARTLPVSHIYLRSIELHQVSFEDMNEILVVLRLITSSPNLEELHVSG-SSNP 366
            L +G  +  +L    +    +E  ++   D +  +++ RL+ SSPNL EL       +P
Sbjct: 301 -LCLGVYTEESLYHEGLVFNQLEQLKICSCDSDWSILLSRLLESSPNLRELEAYVIEDHP 360

Query: 367 VAASEAPDLDFWENE--CPSNCTFGKLKVVKTTDMSG-VPHEMEFIKYLLRNCPVLETMS 402
               + P+   W N+  C   C    L+  K ++M G + ++M+  KY+LRN   L++ +
Sbjct: 361 DRRVDLPNQ--WGNQLNCVPKCLLSSLETFKWSEMYGLLQNQMDVAKYILRNARCLKSAT 420

[Close]

BLAST of Carg01787 vs. Swiss-Prot
Match: sp|Q9FZ70|FDL1_ARATH (F-box/FBD/LRR-repeat protein At1g13570 OS=Arabidopsis thaliana OX=3702 GN=At1g13570 PE=2 SV=1)

HSP 1 Score: 434.5 bits (1116), Expect = 1.3e-120
Identity = 225/413 (54.48%), Postives = 295/413 (71.43%), Query Frame = 0


Query: 8   DHLSDLPQSIIECILTRLPIRDAIRTSVLSRRWRYKWNTLTQLVFDDDCVAMSNDG--IY 67
           D +SDLPQSIIE I                       +TLT LVFD+ CV+ SND   + 
Sbjct: 6   DFISDLPQSIIENIXXXXXXXXXXXXXXXXXXXXXXXSTLTDLVFDEKCVSPSNDRCVVE 65

Query: 68  EDLIYFITHVLFLHEGPIHKFHLSATYLQNTPDLDQWMLFLSRKGIRELIIELGDGEWFR 127
            +L+ FIT VL LH+GPIHKF LS ++ Q  PD+DQW+LFLSR GI+EL+++LG+GE FR
Sbjct: 66  TNLVRFITGVLLLHQGPIHKFQLSTSFKQCRPDIDQWLLFLSRNGIKELVLKLGEGE-FR 125

Query: 128 VHSCLFNCSKLTLLELYRCELDPPPTFKGFLCLKSLKLHQVLIAPEDIESLIANCPLLET 187
           V +CLFNC KLT LEL  CE DPP  FKGF  LKSL LHQ+L+APE IESLI+ CPLLE 
Sbjct: 126 VPACLFNCLKLTCLELCHCEFDPPQYFKGFSYLKSLNLHQILVAPEVIESLISGCPLLEF 185

Query: 188 LALSYFDSLVLNICAPNLKYLYLEGEFRDICLKNTPLLVAISVALYMNDDTEPFGDNSDC 247
           L+LSYFDSLVL+I APNL YLYL+GEF+DI L+NTP LVAISV++YM++D   F  +SD 
Sbjct: 186 LSLSYFDSLVLSISAPNLMYLYLDGEFKDIFLENTPKLVAISVSMYMHEDVTDFEQSSDY 245

Query: 248 NFEKFFGGVPYLEKLTGHVYFTKYLSIGNSARTLPVSHIYLRSIELHQVSFEDMNEILVV 307
           N  KF GGVP LEKL G++YFTKYLSIG+    LP+++I+L++IEL+QV FED +E+LV+
Sbjct: 246 NLVKFLGGVPLLEKLVGYIYFTKYLSIGDDPGRLPLTYIHLKTIELYQVCFEDADEVLVL 305

Query: 308 LRLITSSPNLEELHVSGSSNPVAASEAPDLDFWENECPSNCTFGKLKVVKTTDMSGVPHE 367
           LRL+T SPNL+EL VS S       E    D +E +   +     L+ VK TD SG+ +E
Sbjct: 306 LRLVTHSPNLKELKVSASPVQPFPLEEEGFDLFERDY-FDYKLPSLESVKITDASGIRYE 365

Query: 368 MEFIKYLLRNCPVLETMSIRPCVYVTDRRLNMLIELLKFRRASPQAEILFIQE 419
           +EFI++LL   PVLET+++   +   D +++M+IELL++ R SP+A++LF+Q+
Sbjct: 366 LEFIRFLLGTSPVLETVTVSSSLSDKDAKMDMVIELLRYPRVSPRAQLLFLQD 416

[Close]

BLAST of Carg01787 vs. Swiss-Prot
Match: sp|Q9FM94|FBD21_ARATH (FBD-associated F-box protein At5g56370 OS=Arabidopsis thaliana OX=3702 GN=At5g56370 PE=2 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 2.9e-22
Identity = 109/445 (24.49%), Postives = 187/445 (42.02%), Query Frame = 0


Query: 7   MDHLSDLPQSIIECILTRLPIRDAIRTSVLSRRWRYKWNTLTQLVFDDDCVAMSNDGIYE 66
           MD +S LP   +  IL+ LP +D + TSVLS+RWRY W  + +L +      +  +  + 
Sbjct: 1   MDSISLLPDDFLLRILSLLPTKDVLNTSVLSKRWRYLWKLVPKLQYS----LIDKNADHG 60

Query: 67  DLIYFITHVLFLHEGPI-HKFHLSATYLQNTPDLDQWMLFLSRKGIRELIIELGDGEWFR 126
             + F+   L L   P+    HL      +  D+  W+     KG+ EL     D E ++
Sbjct: 61  TFVRFVDRSLLLSMAPVLESLHLKLGRQCSEVDIGFWVRIAVEKGLCELDF---DYEHYK 120

Query: 127 VHSC-----LFNCSKLTLLELYRCELDPPPTFKGFLCLKSLKLHQVL-IAPEDIESLIAN 186
              C     LF C  LT+L+L    L        F  LK+L L  V+ +  E  + L+++
Sbjct: 121 TEPCRLPQSLFTCGTLTVLKLKNVSLKDVQFPVCFKLLKTLHLEYVIFLDKETPQKLLSS 180

Query: 187 CPLLETLALSYFDSLVLNICA-----PNL-KYLYLEGEFRDICLKNTPLLVAISVALYMN 246
           CP+LE   L+  D  V N+ +     P+L +++Y  G   ++ + NTP L  + +     
Sbjct: 181 CPILEVFDLTRDDDDVDNVMSFSVMVPSLQRFIYCGGSGAELVM-NTPSLKYLKL----- 240

Query: 247 DDTEPFGDNSDCNFEKFFGGVPYLEKLTGHV--------YFTKYLSIGNSARTLPVSHIY 306
                    S C +E   G +P  E +  HV          T   S+      LP     
Sbjct: 241 ---------SGCGYECMIGNLP--EIVEAHVEVACSTDDILTSLASVKRLLLCLPTEPEL 300

Query: 307 LRSIELHQVSFEDM----NEILVVLRLITSSPNLEELHVSGSSNPVAASEAPDLDFWE-- 366
                 HQ+   +      E  +++ ++  SP L  L ++ +      S++  +  WE  
Sbjct: 301 PTGTIFHQLEHLEFCSCCTEWDILMFMLKHSPKLRSLKLNETHGYTIVSQSDPMFHWEEP 360

Query: 367 NECPSNCTFGKLKVVKTTDMSGVPHEMEFIKYLLRNCPVLETMSIRP--CVYV------- 416
           +  P    F  L+ ++  +  G+  E E   +LL++   L+  +  P  C  V       
Sbjct: 361 SSVPETLMF-VLETLEWRNYRGLKMENELASFLLKHSRRLKIATFSPADCKQVRIELRTT 420

[Close]

BLAST of Carg01787 vs. Swiss-Prot
Match: sp|Q9LQM1|FBD39_ARATH (Probable FBD-associated F-box protein At1g32375 OS=Arabidopsis thaliana OX=3702 GN=At1g32375 PE=4 SV=2)

HSP 1 Score: 107.8 bits (268), Expect = 2.9e-22
Identity = 115/438 (26.26%), Postives = 190/438 (43.38%), Query Frame = 0


Query: 7   MDHLSDLPQSIIECILTRLPIRDAIRTSVLSRRWRYKWNTLTQLVFDDDCVAMSNDGIYE 66
           MD LS LP++++  IL+ L  +D + T VLS+RW++ W  + +L++DD   A+     Y 
Sbjct: 1   MDKLSQLPEALLVRILSLLSAKDVVSTMVLSKRWQFLWMLVPKLIYDDSYQAIE----YG 60

Query: 67  DLIYFITHVLFLHEGPI---HKFHLSATYLQNTPDLDQWMLFLSRKGIRELIIEL----G 126
               F+     LH+  +     F L  T    T D+  W+    +  +RELIIE+     
Sbjct: 61  SFSRFVDRSFTLHDAQVLDTLHFKLGKTSC-GTGDIRVWIKTAEKSCLRELIIEIDKSNS 120

Query: 127 DGEWFRVHSCLFNCSK-LTLLELYRCELDPPPTFKGFLCLKSLKLHQVLIAPED-IESLI 186
           D     +   L+ C + L  L+L    L    +   F  LK+L L  +    ++ I+ L+
Sbjct: 121 DNSSVVLPRSLYTCCRMLVTLKLNNAVLVDATSSFSFPSLKTLSLVSMKFPGDELIKMLL 180

Query: 187 ANCPLLETLALS---YFDSLVLNICAPNLKYLYL-EGEFRDI-----CLKNTPLLVAISV 246
           +NCP+LE L +    Y +     +   +LK L L E E   I      + +TP L  + +
Sbjct: 181 SNCPVLEDLVVKRCPYDNVTTFTVRVSSLKCLVLHETELASINADCGFVIDTPSLECLDI 240

Query: 247 -------ALYMNDDTEPFGDNSDCNFEKFFGGVPYLEKLTGHVYFTK--YLSIGNSARTL 306
                   +  N+ T+    N  CN         + ++L G +   K  Y+ I +S    
Sbjct: 241 EDGRGGFCVIENNMTKVVKANV-CN------SYVHTQQLMGSISSVKRLYVCIPSSKDAY 300

Query: 307 PVSHIY--LRSIELHQVSFEDMNEILVVLRLITSSPNLEELHVSGSSNPVAASEAPDLDF 366
           PV  ++  L  + +     E +N ++ VLR    SP L EL +    N V  S  P   +
Sbjct: 301 PVGSVFHCLVRLTICTCETEWLNLLMCVLR---DSPKLRELKL--VKNHVYRSHQPRPCW 360

Query: 367 WENECPSNCTFGKLKVVKTTDMSGVPHEMEFIKYLLRNCPVLETMSIRPCVYVTDRRLNM 416
            E      C    L+ ++     G   E E   ++LR+   L+ ++I       +++  M
Sbjct: 361 NEPSAVPECLLTSLETLEWVKYEGTEEEKEVAAFILRSGSCLKKVTISSKSTDINKKFEM 420

[Close]

BLAST of Carg01787 vs. Swiss-Prot
Match: sp|Q9LJF9|FDL44_ARATH (F-box/FBD/LRR-repeat protein At3g26920 OS=Arabidopsis thaliana OX=3702 GN=At3g26920 PE=2 SV=3)

HSP 1 Score: 107.5 bits (267), Expect = 3.8e-22
Identity = 108/433 (24.94%), Postives = 188/433 (43.42%), Query Frame = 0


Query: 8   DHLSDLPQSIIECILTRLPIRDAIRTSVLSRRWRYKWNTLTQLVFDDDCVAMSNDGIYED 67
           D +S LP++++  IL+ LP ++ +  SVL++RWR+ W  +  L F       +ND   E 
Sbjct: 17  DRISQLPEALLLQILSLLPTKEVVAVSVLAKRWRFLWKMVPSLEF---FYYFTND--LER 76

Query: 68  LIYFITHVLFLHEGP-IHKFHLSATYLQNTPDLDQWMLFLSRKG--IRELIIELGDGEWF 127
             Y ++  LF H+ P +   HL+  +  +   +D  +L     G  +R+L++++  G+WF
Sbjct: 77  FSYNVSKCLFSHQAPFLQSLHLNMNFGCDPRIMDFEILIGIAFGRQLRKLVLKVYSGDWF 136

Query: 128 RVHSCLFNCSKLTLLELYRCELDPPPTFKGFLCLKSLKLHQV-LIAPEDIESLIANCPLL 187
           +  + L+N   L  LELY C L   P       L++L LH+V  +  E + +L+A C  L
Sbjct: 137 KFPTSLYNSETLETLELYHCILIDVPFPVCLKSLRTLNLHEVEFVNDESVVNLLAGCISL 196

Query: 188 ETLALSYFDSL---VLNICAPNLKYLYLEGEFRD---------------ICLKNTPLLVA 247
           E L +     L      I  P+L+ L +  E+ +                          
Sbjct: 197 ENLVIHQTTDLNVKTFTIAVPSLQRLTVIVEYYEEFSXXXXXXXXXXXXXXXXXXXXXXX 256

Query: 248 ISVALYMNDDTEPFGDNSDCNFEKFFGGVPYLEKLTGHVYFTKYLSIGNSARTLPVSHIY 307
                          D S   FE   G +  +++L+  V   +  S+       P+S+ +
Sbjct: 257 XXXXXXXXXVEASIIDVSFKVFESILGSLASVQRLSLKVSLVEIFSLP------PISNTF 316

Query: 308 LRSIELHQVSFEDMNEILVVLRLITSSPNLEELHVSGSSNPVAASEAPDLDFW-ENECPS 367
                L   +++     L+ L L T SPNL+ L +    + + + E    + W E +   
Sbjct: 317 YHLTYLELSTYKPKWWNLLTLMLDT-SPNLQVLKI---FDFMTSQEQRPWEKWNEPKNVP 376

Query: 368 NCTFGKLKVVKTTDMSG-VPHEMEFIKYLLRNCPVLETMSIRPCVYVTDRRLNMLIELLK 417
            C    L+    T   G + +E+E  KY+LRN   L+  +        D+R+ M+ EL  
Sbjct: 377 ECLLLHLETFVWTCYEGKLENEIELAKYILRNARRLKKATFSIIEINPDKRVEMVGELKS 434

[Close]

BLAST of Carg01787 vs. Swiss-Prot
Match: sp|Q9FM89|FDL38_ARATH (F-box/FBD/LRR-repeat protein At5g56420 OS=Arabidopsis thaliana OX=3702 GN=At5g56420 PE=2 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 7.1e-21
Identity = 113/438 (25.80%), Postives = 182/438 (41.55%), Query Frame = 0


Query: 8   DHLSDLPQSIIECILTRLPIRDAIRTSVLSRRWRYKWNTLTQLVFDDDCVAMSNDGIYED 67
           D LS LP   +  IL+ LP +D + TS+LS+RWR+ W  + +L +D       +D     
Sbjct: 6   DRLSQLPDDFLLQILSWLPTKDVLVTSLLSKRWRFLWTLVPRLNYD----LRLHDNTCPR 65

Query: 68  LIYFITHVLFLHEGPIHK---FHLSATYLQNTPDLDQWMLFLSRKGIRELIIELGDGEW- 127
              F+   L LH+ P  +     + +       D+  W+     + +REL +    GE  
Sbjct: 66  FSQFVDRSLLLHKAPTLESLNIKIGSICFTAEKDVGVWVRIGVDRFVRELSVSYCSGEEP 125

Query: 128 FRVHSCLFNCSKLTLLELYRCELDPPPTFKGFLCLKSLKLHQV-LIAPEDIESLIANCPL 187
            R+  CLF CS L +L+L    L+    +  F  LK+L L  V  +  + +  +I++C  
Sbjct: 126 IRLPKCLFTCSTLAVLKLENITLEDASCYVCFQSLKTLHLLDVKYLDDQSLPRIISSCSS 185

Query: 188 LETLALSYF---DSLVLNICAPNLKYLYL-------EGEFRDICLKNTPLLVAISVA--- 247
           LE L +      +  V+ + AP+LK L L       EG+  D  L +TP L  + +    
Sbjct: 186 LEDLVVQRCPGDNVKVVTVTAPSLKTLSLHKSSQAFEGD-DDGFLIDTPKLKRVDIEDYW 245

Query: 248 ---LYMNDDTEPFGDNSDC---NFEKFFGGVPYLEKLTGHVYFTKYLSIGNSARTLPVSH 307
               Y+ +  E    N D    N EK  G +  +++L         L +  S    P   
Sbjct: 246 GGFCYIENMPEVVEANVDVIYKNTEKLLGSITSVKRLA--------LCLITSDAAYPAGT 305

Query: 308 IYLRSIELHQVSFEDMNEILVVLRLITSSPNLEEL-----HVSGSSNPVAASEAPDLDFW 367
           I+ + + L   +       L+  RLI  SP L  L     H+  + +P A+        W
Sbjct: 306 IFSQLVHLELCTCAPRWWDLLT-RLIEDSPKLRVLKLRQKHIRRAPSPRAS--------W 365

Query: 368 ENECPSNCTFGKLKVVKTTDMSGVPHEMEFIKYLLRNCPVLETMSIRPCVYVT-DRRLNM 416
           +      C    L+  K     G   + E   ++L++   L+T  I P    T   +  M
Sbjct: 366 KQPALPKCLLFHLETFKWELYEGSQKQKEVATFILKHAIRLKTAIISPKPTSTLLEKHEM 421

[Close]

BLAST of Carg01787 vs. TrEMBL
Match: tr|A0A1S3BF74|A0A1S3BF74_CUCME (LOW QUALITY PROTEIN: F-box/FBD/LRR-repeat protein At1g13570-like OS=Cucumis melo OX=3656 GN=LOC103489218 PE=4 SV=1)

HSP 1 Score: 818.5 bits (2113), Expect = 6.7e-234
Identity = 394/418 (94.26%), Postives = 410/418 (98.09%), Query Frame = 0


Query: 1   MGDILGMDHLSDLPQSIIECILTRLPIRDAIRTSVLSRRWRYKWNTLTQLVFDDDCVAMS 60
           MGD+LG+DHLSDLPQSIIECILTRLPIRDAIRTS+LSRRWRYKW TLTQLVFDDDCVAMS
Sbjct: 1   MGDVLGVDHLSDLPQSIIECILTRLPIRDAIRTSILSRRWRYKWTTLTQLVFDDDCVAMS 60

Query: 61  NDGIYEDLIYFITHVLFLHEGPIHKFHLSATYLQNTPDLDQWMLFLSRKGIRELIIELGD 120
           NDGIYEDLIYFITHVL LHEGPIHKFHLSATYLQNTPDLDQW+LFLSRKGIRELIIELGD
Sbjct: 61  NDGIYEDLIYFITHVLXLHEGPIHKFHLSATYLQNTPDLDQWLLFLSRKGIRELIIELGD 120

Query: 121 GEWFRVHSCLFNCSKLTLLELYRCELDPPPTFKGFLCLKSLKLHQVLIAPEDIESLIANC 180
           GEWFRVHSCLFNCSKLTLLELYRCELDPPPTFKGFLCLKSLKLHQVLIAPEDIESLI+NC
Sbjct: 121 GEWFRVHSCLFNCSKLTLLELYRCELDPPPTFKGFLCLKSLKLHQVLIAPEDIESLISNC 180

Query: 181 PLLETLALSYFDSLVLNICAPNLKYLYLEGEFRDICLKNTPLLVAISVALYMNDDTEPFG 240
           PLLE+LALSYFDSLVLNICAPNLKYLYLEGEFRDICL+NTPLLV+ISVALYMND++EPFG
Sbjct: 181 PLLESLALSYFDSLVLNICAPNLKYLYLEGEFRDICLQNTPLLVSISVALYMNDESEPFG 240

Query: 241 DNSDCNFEKFFGGVPYLEKLTGHVYFTKYLSIGNSARTLPVSHIYLRSIELHQVSFEDMN 300
           D SDCN+EKF GGVPYLEKLTGHVYFTKYLSIGNSARTLPVS+IYL+SIELHQVSFEDMN
Sbjct: 241 DISDCNYEKFLGGVPYLEKLTGHVYFTKYLSIGNSARTLPVSYIYLKSIELHQVSFEDMN 300

Query: 301 EILVVLRLITSSPNLEELHVSGSSNPVAASEAPDLDFWENECPSNCTFGKLKVVKTTDMS 360
           EILVVLRLITSSPNLEEL +SGSSNPVAASEAPDLDFWENECPSN TFGKL+VVK TDMS
Sbjct: 301 EILVVLRLITSSPNLEELQISGSSNPVAASEAPDLDFWENECPSNLTFGKLRVVKATDMS 360

Query: 361 GVPHEMEFIKYLLRNCPVLETMSIRPCVYVTDRRLNMLIELLKFRRASPQAEILFIQE 419
           GVPHEMEFIKYLLRNCPVLE MSIRPCVYVTDRRLNMLIELLKFRRASP+AEILFIQE
Sbjct: 361 GVPHEMEFIKYLLRNCPVLEIMSIRPCVYVTDRRLNMLIELLKFRRASPEAEILFIQE 418

[Close]

BLAST of Carg01787 vs. TrEMBL
Match: tr|A0A0A0KWB4|A0A0A0KWB4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G608040 PE=4 SV=1)

HSP 1 Score: 817.8 bits (2111), Expect = 1.1e-233
Identity = 392/418 (93.78%), Postives = 410/418 (98.09%), Query Frame = 0


Query: 1   MGDILGMDHLSDLPQSIIECILTRLPIRDAIRTSVLSRRWRYKWNTLTQLVFDDDCVAMS 60
           MGD+LG+DHLSDLPQSIIECILTRLPIRDAIRTS+LSRRWRYKW TLTQLVFDDDCVAMS
Sbjct: 1   MGDVLGVDHLSDLPQSIIECILTRLPIRDAIRTSILSRRWRYKWTTLTQLVFDDDCVAMS 60

Query: 61  NDGIYEDLIYFITHVLFLHEGPIHKFHLSATYLQNTPDLDQWMLFLSRKGIRELIIELGD 120
           NDGIYEDLIYFITHVLFLHEGPIHKFHLSATYLQNTPDLDQW+LFLSRKGIRELIIELGD
Sbjct: 61  NDGIYEDLIYFITHVLFLHEGPIHKFHLSATYLQNTPDLDQWLLFLSRKGIRELIIELGD 120

Query: 121 GEWFRVHSCLFNCSKLTLLELYRCELDPPPTFKGFLCLKSLKLHQVLIAPEDIESLIANC 180
           GEWFRVHSCLFNCSKLTLLELYRCELDPPPTFKGFLCLKSLKLHQVLIAPEDIESLI+NC
Sbjct: 121 GEWFRVHSCLFNCSKLTLLELYRCELDPPPTFKGFLCLKSLKLHQVLIAPEDIESLISNC 180

Query: 181 PLLETLALSYFDSLVLNICAPNLKYLYLEGEFRDICLKNTPLLVAISVALYMNDDTEPFG 240
           PLLE+LALSYFDSLVLNICAPNLKYLYLEGEFRDICL+NTPLLV+ISVALYMND++EPFG
Sbjct: 181 PLLESLALSYFDSLVLNICAPNLKYLYLEGEFRDICLQNTPLLVSISVALYMNDESEPFG 240

Query: 241 DNSDCNFEKFFGGVPYLEKLTGHVYFTKYLSIGNSARTLPVSHIYLRSIELHQVSFEDMN 300
           D SDCN+EKF GGVPYLEKLTGHVYFTKYLSIGNSAR +P+S+IYL+SIELHQVSFEDMN
Sbjct: 241 DLSDCNYEKFLGGVPYLEKLTGHVYFTKYLSIGNSARKMPISYIYLKSIELHQVSFEDMN 300

Query: 301 EILVVLRLITSSPNLEELHVSGSSNPVAASEAPDLDFWENECPSNCTFGKLKVVKTTDMS 360
           EILVVLRLITSSPNLEEL +SGSSNPVAASEAPDLDFWENECPSN TFGKL+VVK TDMS
Sbjct: 301 EILVVLRLITSSPNLEELQISGSSNPVAASEAPDLDFWENECPSNLTFGKLRVVKATDMS 360

Query: 361 GVPHEMEFIKYLLRNCPVLETMSIRPCVYVTDRRLNMLIELLKFRRASPQAEILFIQE 419
           GVPHEMEFIKYLLRNCPVLE MSIRPCVYVTDRRLNMLIELLKFRRASP+AEILFIQE
Sbjct: 361 GVPHEMEFIKYLLRNCPVLEIMSIRPCVYVTDRRLNMLIELLKFRRASPEAEILFIQE 418

[Close]

BLAST of Carg01787 vs. TrEMBL
Match: tr|A0A0H4TD52|A0A0H4TD52_MOMCH (F-box/FBD/LRR-repeat protein OS=Momordica charantia OX=3673 PE=2 SV=1)

HSP 1 Score: 788.1 bits (2034), Expect = 9.7e-225
Identity = 380/418 (90.91%), Postives = 402/418 (96.17%), Query Frame = 0


Query: 1   MGDILGMDHLSDLPQSIIECILTRLPIRDAIRTSVLSRRWRYKWNTLTQLVFDDDCVAMS 60
           M D+LG+DHLSDLPQSIIECILTRLPIRDAIRTS+LSRRWR+KW TLTQLVFDDDCVAMS
Sbjct: 1   MDDLLGVDHLSDLPQSIIECILTRLPIRDAIRTSILSRRWRFKWATLTQLVFDDDCVAMS 60

Query: 61  NDGIYEDLIYFITHVLFLHEGPIHKFHLSATYLQNTPDLDQWMLFLSRKGIRELIIELGD 120
           NDG+Y+DLIYFITHVLFLHEGPIHKFHLSATYLQNTPDLDQWMLFLSRKGIREL IELG+
Sbjct: 61  NDGVYDDLIYFITHVLFLHEGPIHKFHLSATYLQNTPDLDQWMLFLSRKGIRELTIELGE 120

Query: 121 GEWFRVHSCLFNCSKLTLLELYRCELDPPPTFKGFLCLKSLKLHQVLIAPEDIESLIANC 180
           GEWFRVHSCLFNCSKLT LELYRCELDPPP FKGFLCLKSLKLHQVLIAPEDIESLI+NC
Sbjct: 121 GEWFRVHSCLFNCSKLTRLELYRCELDPPPNFKGFLCLKSLKLHQVLIAPEDIESLISNC 180

Query: 181 PLLETLALSYFDSLVLNICAPNLKYLYLEGEFRDICLKNTPLLVAISVALYMNDDTEPFG 240
           PLLE+LALSYFDSLVLNI APNLKYL+LEGEFRDICL+NTPLLVAISVALYM+DD EPF 
Sbjct: 181 PLLESLALSYFDSLVLNISAPNLKYLFLEGEFRDICLQNTPLLVAISVALYMSDDAEPFD 240

Query: 241 DNSDCNFEKFFGGVPYLEKLTGHVYFTKYLSIGNSARTLPVSHIYLRSIELHQVSFEDMN 300
            +SDCNFEKF GGVPYLEKLTGH+YFTKYLSIGNSA TLPVS+IYLRSIEL+QVSFEDMN
Sbjct: 241 HSSDCNFEKFLGGVPYLEKLTGHIYFTKYLSIGNSATTLPVSYIYLRSIELYQVSFEDMN 300

Query: 301 EILVVLRLITSSPNLEELHVSGSSNPVAASEAPDLDFWENECPSNCTFGKLKVVKTTDMS 360
           EILVVLRLITS+PNLEEL +SGSSNPVAASEAPDLDFWENECPSN TFG L+VVKTTDMS
Sbjct: 301 EILVVLRLITSAPNLEELQISGSSNPVAASEAPDLDFWENECPSNGTFGNLRVVKTTDMS 360

Query: 361 GVPHEMEFIKYLLRNCPVLETMSIRPCVYVTDRRLNMLIELLKFRRASPQAEILFIQE 419
           GVPHEMEFIKYLLRN P+LETMSI+PCVYVTDRRLNMLIELLKFRRASP+AEILFI E
Sbjct: 361 GVPHEMEFIKYLLRNSPMLETMSIKPCVYVTDRRLNMLIELLKFRRASPEAEILFIPE 418

[Close]

BLAST of Carg01787 vs. TrEMBL
Match: tr|M5XCU5|M5XCU5_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G299200 PE=4 SV=1)

HSP 1 Score: 623.2 bits (1606), Expect = 4.1e-175
Identity = 303/421 (71.97%), Postives = 353/421 (83.85%), Query Frame = 0


Query: 1   MGDILGMDHLSDLPQSIIECILTRLPIRDAIRTSVLSRRWRYKWNTLTQLVFDDDCVAMS 60
           MGD+L  D +S+LPQSIIE ILTRLPIRDAIRTS LS +WRYKW TLT L FD+ CV +S
Sbjct: 1   MGDLLDRDLISNLPQSIIESILTRLPIRDAIRTSCLSTKWRYKWTTLTHLAFDEKCVTLS 60

Query: 61  NDG--IYEDLIYFITHVLFLHEGPIHKFHLSATYLQNTPDLDQWMLFLSRKGIRELIIEL 120
           ND   +   LI FIT  LFLH+GP+HKF LS +YLQ+ PD+DQW+LFLSR  I+EL++EL
Sbjct: 61  NDRTLVERSLIDFITRALFLHQGPVHKFQLSTSYLQSCPDIDQWILFLSRNDIKELVLEL 120

Query: 121 GDGEWFRVHSCLFNCSKLTLLELYRCELDPPPTFKGFLCLKSLKLHQVLIAPEDIESLIA 180
           G+GEWFRV SCLF C KLT LEL+RCELDPPP FKGFLCLKSL LHQVL+AP+ IESLI+
Sbjct: 121 GEGEWFRVPSCLFYCKKLTRLELFRCELDPPPAFKGFLCLKSLNLHQVLVAPDAIESLIS 180

Query: 181 NCPLLETLALSYFDSLVLNICAPNLKYLYLEGEFRDICLKNTPLLVAISVALYMNDD-TE 240
            CPLLE+LALSYFDSL LNI APNLKYL LEGEF+DICL+NTPLLVAISVA+Y+ DD  E
Sbjct: 181 GCPLLESLALSYFDSLALNIRAPNLKYLCLEGEFKDICLENTPLLVAISVAMYVTDDIAE 240

Query: 241 PFGDNSDCNFEKFFGGVPYLEKLTGHVYFTKYLSIGNSARTLPVSHIYLRSIELHQVSFE 300
            F  +S+CNF KF GG+P LE+L GH+YFTKYLSIGN    LP+++ +L+ IEL+QVSFE
Sbjct: 241 HFEQSSNCNFIKFLGGIPRLERLVGHIYFTKYLSIGNDQGILPITYNHLKIIELYQVSFE 300

Query: 301 DMNEILVVLRLITSSPNLEELHVSGSSNPVAASEAPDLDFWENECPSNCTFGKLKVVKTT 360
           DM EILVVLRLIT+SPNL+EL +SGSSN +AA EA DLDFWE +CPS+C FG+LKVVK T
Sbjct: 301 DMKEILVVLRLITNSPNLQELQISGSSNTLAAIEASDLDFWEKQCPSDCAFGRLKVVKMT 360

Query: 361 DMSGVPHEMEFIKYLLRNCPVLETMSIRPCVYVTDRRLNMLIELLKFRRASPQAEILFIQ 419
           DMSGVPHEMEFIK+LL+  PVLETMSI P  YV D RLNMLIEL+ F+RASP+AEILFIQ
Sbjct: 361 DMSGVPHEMEFIKFLLKKSPVLETMSITPYAYVLDGRLNMLIELVSFKRASPEAEILFIQ 420

[Close]

BLAST of Carg01787 vs. TrEMBL
Match: tr|A0A061EA40|A0A061EA40_THECC (F-box/RNI-like superfamily protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_011375 PE=4 SV=1)

HSP 1 Score: 616.7 bits (1589), Expect = 3.9e-173
Identity = 300/421 (71.26%), Postives = 357/421 (84.80%), Query Frame = 0


Query: 1   MGDILGMDHLSDLPQSIIECILTRLPIRDAIRTSVLSRRWRYKWNTLTQLVFDDDCVAMS 60
           M D+   D +SDLPQSIIE ILTRLPIRDA+RTS+LS +WRYKW T+TQLVFD+ CV +S
Sbjct: 1   MDDVSCPDLISDLPQSIIEGILTRLPIRDAVRTSILSSKWRYKWATITQLVFDEKCVDLS 60

Query: 61  NDGI-YED-LIYFITHVLFLHEGPIHKFHLSATYLQNTPDLDQWMLFLSRKGIRELIIEL 120
           ND   +ED L+ FIT  LFLH+GPIHKF L+ TYLQ  PD+DQW+LFLSR  I+EL++EL
Sbjct: 61  NDRCEFEDSLVKFITRALFLHQGPIHKFQLTTTYLQCCPDIDQWLLFLSRNDIKELVLEL 120

Query: 121 GDGEWFRVHSCLFNCSKLTLLELYRCELDPPPTFKGFLCLKSLKLHQVLIAPEDIESLIA 180
           G+GEWFRV SCLFNC KLT LEL+RCELDPPP+FKGFLCLKSL LHQVL++PE IESLI+
Sbjct: 121 GEGEWFRVPSCLFNCRKLTRLELFRCELDPPPSFKGFLCLKSLNLHQVLVSPEAIESLIS 180

Query: 181 NCPLLETLALSYFDSLVLNICAPNLKYLYLEGEFRDICLKNTPLLVAISVALYMNDD-TE 240
           +CPLLE+LALSYFDSL L I APNLKYL LEGEF+DICL+NTPLLVA+SVA+YM DD  E
Sbjct: 181 SCPLLESLALSYFDSLALTIHAPNLKYLCLEGEFKDICLENTPLLVAMSVAMYMTDDIAE 240

Query: 241 PFGDNSDCNFEKFFGGVPYLEKLTGHVYFTKYLSIGNSARTLPVSHIYLRSIELHQVSFE 300
            F  +S CNF +F GGVP LE+L GH+YFTKYLSIG+    L +++ +L+ +EL+QVSFE
Sbjct: 241 HFEQSSGCNFNRFLGGVPRLERLIGHIYFTKYLSIGDDPGRLRITYNHLKVVELYQVSFE 300

Query: 301 DMNEILVVLRLITSSPNLEELHVSGSSNPVAASEAPDLDFWENECPSNCTFGKLKVVKTT 360
           DM EILVVLRLIT++PNL+EL +SGSSN +AA +APDLDFW+ +CP++CTF +LKVVK T
Sbjct: 301 DMKEILVVLRLITNTPNLKELQISGSSNTLAAIDAPDLDFWDQKCPTDCTFKQLKVVKMT 360

Query: 361 DMSGVPHEMEFIKYLLRNCPVLETMSIRPCVYVTDRRLNMLIELLKFRRASPQAEILFIQ 419
           DMSGVPHEMEFIK+LL N P LETMSI PCVY+ D R+NMLIELL+FRRAS QAEILFIQ
Sbjct: 361 DMSGVPHEMEFIKFLLANSPALETMSISPCVYLMDGRINMLIELLRFRRASAQAEILFIQ 420

The following BLAST results are available for this feature:

BLAST of Carg01787 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022979919.1	1.2e-245	99.76	F-box/FBD/LRR-repeat protein At1g13570-like [Cucurbita maxima]	[more]
XP_023511542.1	1.2e-245	99.52	F-box/FBD/LRR-repeat protein At1g13570-like [Cucurbita pepo subsp. pepo]	[more]
XP_022957268.1	9.7e-245	99.28	F-box/FBD/LRR-repeat protein At1g13570-like [Cucurbita moschata]	[more]
XP_008446506.1	1.0e-233	94.26	PREDICTED: LOW QUALITY PROTEIN: F-box/FBD/LRR-repeat protein At1g13570-like [Cuc...	[more]
XP_004135131.1	1.7e-233	93.78	PREDICTED: F-box/FBD/LRR-repeat protein At1g13570 [Cucumis sativus] >KGN52016.1 ...	[more]

BLAST of Carg01787 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G13570.1	7.4e-122	54.48	F-box/RNI-like superfamily protein	[more]
AT1G32375.1	1.6e-23	26.26	F-box/RNI-like/FBD-like domains-containing protein	[more]
AT5G56370.1	1.6e-23	24.49	F-box/RNI-like/FBD-like domains-containing protein	[more]
AT5G56420.1	3.9e-22	25.80	F-box/RNI-like/FBD-like domains-containing protein	[more]
AT4G00315.1	5.1e-22	26.65	F-box/RNI-like/FBD-like domains-containing protein	[more]

BLAST of Carg01787 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FZ70\|FDL1_ARATH	1.3e-120	54.48	F-box/FBD/LRR-repeat protein At1g13570 OS=Arabidopsis thaliana OX=3702 GN=At1g13...	[more]
sp\|Q9FM94\|FBD21_ARATH	2.9e-22	24.49	FBD-associated F-box protein At5g56370 OS=Arabidopsis thaliana OX=3702 GN=At5g56...	[more]
sp\|Q9LQM1\|FBD39_ARATH	2.9e-22	26.26	Probable FBD-associated F-box protein At1g32375 OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|Q9LJF9\|FDL44_ARATH	3.8e-22	24.94	F-box/FBD/LRR-repeat protein At3g26920 OS=Arabidopsis thaliana OX=3702 GN=At3g26...	[more]
sp\|Q9FM89\|FDL38_ARATH	7.1e-21	25.80	F-box/FBD/LRR-repeat protein At5g56420 OS=Arabidopsis thaliana OX=3702 GN=At5g56...	[more]

BLAST of Carg01787 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BF74\|A0A1S3BF74_CUCME	6.7e-234	94.26	LOW QUALITY PROTEIN: F-box/FBD/LRR-repeat protein At1g13570-like OS=Cucumis melo...	[more]
tr\|A0A0A0KWB4\|A0A0A0KWB4_CUCSA	1.1e-233	93.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G608040 PE=4 SV=1	[more]
tr\|A0A0H4TD52\|A0A0H4TD52_MOMCH	9.7e-225	90.91	F-box/FBD/LRR-repeat protein OS=Momordica charantia OX=3673 PE=2 SV=1	[more]
tr\|M5XCU5\|M5XCU5_PRUPE	4.1e-175	71.97	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G299200 PE=4 SV=1	[more]
tr\|A0A061EA40\|A0A061EA40_THECC	3.9e-173	71.26	F-box/RNI-like superfamily protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_0...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036047	F-box-like_dom_sf
IPR032675	LRR_dom_sf
IPR001810	F-box_dom
IPR006566	FBD

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg01787-RA	Carg01787-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006566	FBD domain	SMART	SM00579	9598neu4hmm	coord: 345..416 e-value: 5.6E-11 score: 52.5
IPR006566	FBD domain	PFAM	PF08387	FBD	coord: 343..384 e-value: 5.4E-9 score: 35.7
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 13..54 e-value: 0.0089 score: 25.2
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 9..44 e-value: 1.6E-6 score: 27.8
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 7..68 score: 10.027
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	G3DSA:3.80.10.10		coord: 8..261 e-value: 6.3E-25 score: 89.8
None	No IPR available	PANTHER	PTHR44451:SF2	SUBFAMILY NOT NAMED	coord: 5..417
None	No IPR available	PANTHER	PTHR44451	FAMILY NOT NAMED	coord: 5..417
None	No IPR available	SUPERFAMILY	SSF52047	RNI-like	coord: 105..188 coord: 243..326 coord: 365..401
IPR036047	F-box-like domain superfamily	SUPERFAMILY	SSF81383	F-box domain	coord: 6..63

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg01787	Cla020338	Watermelon (97103) v1	carwmB0842
Carg01787	Csa5G608040	Cucumber (Chinese Long) v2	carcuB0857
Carg01787	MELO3C012185	Melon (DHL92) v3.5.1	carmeB0834
Carg01787	ClCG05G023330	Watermelon (Charleston Gray)	carwcgB0816
Carg01787	CSPI05G24660	Wild cucumber (PI 183967)	carcpiB0877
Carg01787	Cucsa.284200	Cucumber (Gy14) v1	carcgyB0968
Carg01787	CmaCh18G010710	Cucurbita maxima (Rimu)	carcmaB1167
Carg01787	CmoCh18G010910	Cucurbita moschata (Rifu)	carcmoB1135
Carg01787	Lsi04G003190	Bottle gourd (USVL1VR-Ls)	carlsiB767
Carg01787	Cp4.1LG09g02400	Cucurbita pepo (Zucchini)	carcpeB1169
Carg01787	Cp4.1LG01g13300	Cucurbita pepo (Zucchini)	carcpeB1177
Carg01787	CsGy5G024160	Cucumber (Gy14) v2	carcgybB0831
Carg01787	MELO3C012185.2	Melon (DHL92) v3.6.1	carmedB0846
Carg01787	CsaV3_5G033690	Cucumber (Chinese Long) v3	carcucB0881
Carg01787	Cla97C05G105260	Watermelon (97103) v2	carwmbB0878
Carg01787	Bhi07G001169	Wax gourd	carwgoB0983

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg01787	Carg21537	Silver-seed gourd	carcarB627

The following block(s) are covering this gene:


Gene	Organism	Block
Carg01787	Watermelon (97103) v2	carwmbB0880
Carg01787	Watermelon (97103) v2	carwmbB0875
Carg01787	Wax gourd	carwgoB0986
Carg01787	Silver-seed gourd	carcarB538
Carg01787	Silver-seed gourd	carcarB461
Carg01787	Cucurbita maxima (Rimu)	carcmaB1160
Carg01787	Cucurbita maxima (Rimu)	carcmaB1162
Carg01787	Cucurbita maxima (Rimu)	carcmaB1170
Carg01787	Cucurbita moschata (Rifu)	carcmoB1138
Carg01787	Cucurbita pepo (Zucchini)	carcpeB1173
Carg01787	Bottle gourd (USVL1VR-Ls)	carlsiB768
Carg01787	Melon (DHL92) v3.5.1	carmeB0835
Carg01787	Melon (DHL92) v3.6.1	carmedB0847
Carg01787	Watermelon (Charleston Gray)	carwcgB0817
Carg01787	Watermelon (97103) v1	carwmB0846