Carg01777 (gene) Silver-seed gourd

Overview
NameCarg01777
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionPentatricopeptide repeat-containing protein
LocationCucurbita_argyrosperma_scaffold_003 : 382629 .. 388927 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAAAACCCTAACTCCCTTTCCTTACCACGTTTCATACTGCTTTCCGATCCCTCTAACTTATCCCTATCTTTGTTGCTTTTAATTTCACGTTGTCTTAGACGAGAAATCGGCAGGGTTTTCTTCCAATCCTGCTCCCATTTCCATGCTTAGCCGTATTCATCAATGGAAGCCATTACATTCTCTGAGGAAATGCGGGATACTCGCTTCTTTTAGTTCTGTGATCCTTGCTAGGCCTTCAGTTTCTGCCGCCCGCCTCGAAGCGGAATCTGTCACTCCCTCCTTCGTTCTGGGCCAGAACGACCCAGTTTGTGAGATTCTTACGGGTTTAAATTCCTTTGGGTTTAGAGCGTATGTTGGTGGATGTAACTTTCGAACTGTAGTTTCTACTTTGAGTGAAACTGTAGTGGACGGCGTTCTTGAGAGTTTGAATATTCAGAATCCTGATGTTGCTGTGGCATTTTTCTATTTGTTGAGAAATAAGTACGGATTTCGGCATTCCGGATTCTCCCAGCTTGCCGTTTCTCATATTCTAGCGGGTAAAGGAAGATTCAAGGAGTTGCATTGCGTTATAAAGCAATTGGTTGAGGAGCAAGGTATCAGTTCTTGGCATCTCTTTCTTCATGATTGATTGGCTGATATTAGAGAAAAGCAGAGAAGTCGGGCATTCTCCTTCTTAACGCCTAGTGTGTATATTGGCTGAACTAAGAGATTCATAGTTATCATGATAATGTGCATACTTAAGAGTATAAAAAAAAAAAAAAATGGTAGACTAATTCCCCACATTTTCTGCAGTTGAAAAGCACCGTGCTTTCTTTCATGTCTTCCCTGTTTCTTTGATGTATATATAAACCTCGTCTTTTAACGTACTTCTTTTAGACCATCCTTATTTTTCAGTTCATCAACCCCCCCCCCCCCCCTTTTTTTTTTGTTAACATTGGAATGTCTATTTTATGTTGTTTATGTCTCTCGATATTTACTCTCTGGTAGGGTCGGGTTCTGCATCTTCCTTTTGTGACCTGCTCTTGAACAAATTCAGGAATTGGGATTCAAATGGTGTGGTATGGGATATGCTGGCATTTGCGTATTCTAGACATGAAATGATCCATGATGCCCTCTTTGTCGTCGCAAAAATGAAGGATCTAAATTTACAAGCTTCAGTTCCAACTTATAACTCTCTATTGCATAACTTAAGGCACACTGATGTCATGTGGGATATATGCAATGAGATCAAAGCTAGTGGAGCTCCTCAGAGTGAATATACTACCTCAATACTTATACACGGCCTATGTGCGCAGTCCAAGTTACAAGATGCGATTTCATTCCTACAGGACAGCAATGAAGTAGTTGGACCTTCTATTGTGTCTATCAATACCGTTATGTCAAAGTTTTGTAAAGTGGGGCTAGTAGATGTTGCAAGGTCATTTTTCTGTTTGATGGTCAAGAATGGACTTCTTCCTGATTCGTACAGTTATAATATTCTTATTCATGGGTTATGTGTAGCAGGTTCCATGGATGAAGCTCTGGAATTCACAGATGACATGGAAAAGCATGGTGTGGAGCCTGATGTAGTAACATACAACACACTTGCTAAAGGTTTTCTCTTGCTTGGTTTTATGAGTGGGGCCTGGAAAGTCGTCCAGAAAATGTTGCTAAAAGGTCTAAATCCGGATATCGTGACATATACAATACTGATATGTGGGCACTGTCAAATGGGAAATATTGAGGAAGCCCTTAAGCTGCGGCAAGAAACCCTTTCAAGGGGGTTTCAGTTGAACATCATTTCTTACAGTGTGCTACTTAGCTGTTTGTGTAAAGTTGGACGAATAGAAGAAGCATTGGCATTGCTCAATGAAATGGAAACTCTACGTTTGAAACCTGATCTTATAGTATATTCAATCCTCATTCATGGCCTCTGCAAGGAAGGGTTTGTACAAAGGGCTTACCAACTATATGAACAAATGCGTTTGAAGAGAAATTTTCCTAACTACTTTGCTCAACGTGCTGTACTTTTGGGTTTCTTTGAGAATGGAAATATTTCTGAGGCAAGAAGATATTTTGATGCTTTGACTCATATGGATCTGATAGAGGATATTATTTTGTATAATATTATGATTGATGGTTACGTAAGGCTTGGTGATATTTCTGAGGCTATGCAGCTATATTACAGAATGTTTGAAAGGGGGATTACTCCAACTGTTGTCACTTTCAACACTCTTGTCCATGGGTTTTGCAGAAATGGAGACCTAGTGGAGGCTCGAAAGATGTTCGAAATCATTAGGTTGAATGGATTGCTACCCAGTGTAGTAACTTATACTACCCTTATGAATGCGTACTGTGAAGCGGGAAACATGCAGGAAATGTTTGATCTACTCCATGAGATGGAAGCAAATGCTGTTGTTCCAACTCATATAACTTATACTGTACTAATCAAAGGACTCTGCAGACAGAATAAAATGCATGAAGCCCTCCAGTTACTTGAGTATATGTATGCAAAGGGTCTAATGCCAGATCAGATTACATATAATACTATTATCCAATGTTTTTGCAAGGCCAGAGACATTGCAAAAGCTTTCCAGGTTTATAATGAGATGTTGCTCCATAATCTTGATCCTACCCATGTAACTTATAATGTACTTATTAGTGGTCTTTGTGTATATGGTGACCTAAAGGATGCTGATCGAATGCTGGTTTCTATGGAGGATCAAAATATTAGCTTGACAAAAGTTGCTTATATGACAATTATTAAGGCACATTGTGCAAAGGGTCAGGTGTCTAAGGCATTAGGGTTCTTCAATCAAATGTTGGCTAAGAGTTTTGTCATTTCCATCAGAGATTATAGTGCTATCATTAATAGGCTGTGCAAAAGGGGTCTAATTACTGAAGCAAAGTACTTATTTGCTATGATGTTATCTGAAGGTGTAACGCCTGATTCTGAAATCTGCGAGACAATGCTTAATGCTTTCCATCAACATGGTGATAGCAGTTCAGCATTTGAATTTCTTGCTGTGATGGTTAAATCTGGCGTCATTTCACATTGATCCATCAGAAGAGATCAGTCGATCACATCACGCCGTTCCAGATAACCATATTTTGGCATAAGAGGTTAGCATCTGAGGTACAGGTGAGCATTATGAACTTAATCAAAATTCAAGGATGAATTTTTCCCCTAGATTCTAATTTTATTAAGAACGCATGGATCCAGAATATCGGTGTTAGGAGAGGTTGTTCTCGTAGAGTACCATTCTCTAGTTATATCAAATTAACTCTGGTTTTCCCAACTTATTCAACTTGATGGTCACATTTCTTTCAGCTCGAGTATTTGCAACCATAACCATGTACTTTTATGCAAGGGCAAGCTTAACATGAAACGATCACGCTGAATGTCTTACACATATCAAATCCTTTACCCTCTGTTTCGATTACTGTGGGTATGGCACATTAAAATTCTTGATTGATATCTTGAAACTACTACTTTGACTTCCTTTATGAGTTTCTCATGAGACTATCATGGGTAGGAAGCAATCATTCATTTGTGTTATTCTTGTTTCCTCTCCCTAAAATTGCTAAAACCTTCGAAGGAAGCTAGCGATCAGTTATATGACTTGCTTGCTTGTTCATGTTGCAGGATGTAGGGATAATTTTCCCTCCGTGGCATGTATCAAACTTTATGCCTCAGATAAGCAACGAAAGGAAAGTCATGGCAATGACCCTTGTGGACTCTCCCAGCTTGGAGGCTGCAGCAGACAGTCTTATAGAGTGGTTATGACGAGTTGTACTACGAAGTATTAGCTGAGCCTGATTCCTTGCAGCGAGTCGAATAGAAAGTAAGGTATATAGCTTCTCAAAGGCTCATAGGATATCTTCTGACTGAGGGGAAAAAAATCTTGTTGACTTATTTCTTAGCAATTTCGTTGTGCAGGAATTCTCTGAACCTAGAGGGGCATCACTTTCCGAACTCCCGCCTGTATTTGTTAAGTATGGAGGATGGTCGATACTTGATCCGAAGAGGCAACTATTGATACTTGAAGGGATTTAAAGATAAATCAAACATATTTGATCACTGATAGGATAACTCACAACAAAGAAGAACAAGTGGTAAGATCTTTTTTCCTGTCAGTTATTATATTGATACCAGATGCTGCCCTGATCTTCATGTAAATAAGGAAGAAATTAACGTTTACAATTCGACAGCATAATAAAAGAATTTGTTGAACTTTACCATAATAAAAATTGGCCCTTAATCGTTTGGGTAATTCTCAATTAATTATTTTGGTCTCTCTGAATGTTTCTCAAACACATGAAATGGTTGAACTTTTTCTTTGGGGGTGGGGAAGGAGGTCAAGGAGAGATTGTCGTATATTGATTTTATAAGTTGAGAATTACTGTCAAATGAATGAACTAGGTTAGATTATATTTGTCATCAATATTGTTGATAATACTCAATTAGCCAAGACGTTATGAACTGATTGAAAGAGTTGAAATTTGGAATAGACTAAGATAAACAGTAGACCAGATATTGAAAAGCAAGAACCAACGGAAGACAATTAAGGTTCGGCCAATTTTATTTGAAATAGAGACAAGGCCATACACATGAATTGGCAGGCAGCGAAGTCACTTGGTTGGCGGAGGAAGGCTGGCCAGCTTCTTGGCAAATTCTTGCAGGTTCCTCAATGAACTCCCACTGGGGCCAGTTGCATCCGCCACGGCTTTGCTCAGAGCTCTGGCTTTGGCTTTCAGTTTGTCGGAGTTGAAAGACTCGGCGAGGACCTCTCCCAGTTTGTCCGGGTCAGGCACCGAGTTCTCCCCATGGCAGACTTGCACCGCCACTCCAATCTGATCCACCAATACCTTCGAGTTTATCATTTGGTCTCCTTCCATGGCCCAAGCAAATATTGGTACTCCACTCGCTAGGCTCTCCAGTATAGAGTTCCACCCGCAGTGGCTCAGAAACCCTCTCACGGCTCTGTGCCTCAGGATCGCCTCCTGTGGTACCCATCTCTTCACCACCATTCCACGACCAGACACCCGGTCCTCAAACCCGATTGGGATTCCGTCGGACCCACCATCTGTTTGACGAATTGTCTTAACTACCCACACGAATCGAGTCCCGCTTTTCTCAATCCCGGATGCCAGTGCTTCCATTTGCTGCTGATTCAGTTGCTTTTGACTCCCAAAACTAATGTATAGCACCGAACCATCGGGGCATTCATCAAGCCATTTCAGAACCTCATCTGAACTCGATTCCACAGTTGGGTTGTGCCCTTTGACCAGGCTTAGCGGTCCAACTCCAAATACATTCTCGTTGTTGTTTAATTTCCTGTAGAACTCCAAATACTCGGGCTCCAACTCGTCGAAGGTATTGAAAACATTAGCCCAGCAGGTCCCAGCTTCAAACCAGTCGGCTCTTATGGTACTGAATAGTGGGTCAGAATCCCGGTACACGGTGACAAATTCCGGCAAATCCTGATTAGTGAAGGAGGGGGAATTAGGCAATTCAGCCATATGCTTCACTGGGGATTTACGGAACTCTTCGGAAGGTACGTGACGCCAACAGTAATCGAGGACGTCAACGACCCAACAGCCAGAGGAGAAGAAGGAGACTCTAGGGATTTGAAGCTTTTGGGCGAGAGATTGGGTCCATCCAAGGAAGAAATCAGAAATGATGGCGGAGGGAGGTGAAGGGTGGGATTTGAACCACTCAATAATGGGGTCTTGGAGTTGGCGGAGAGCCACTATGATGGGTACGTTGCCTTCGCCGCCGATGTCTTTGATATTCTCGACGCCGGGAGGCAAACCGGGGACAGAAGGGAAGGGGAGAACAAGGGTTTGGACAGAAGGGTGGGCTGAAAGAAGAGGTTGAAGGATGGGGAGGTTCTTGGGGGTAACCAAAACGGTGATGGGGAACCCATAAGAAGCTAAGAAATGGGTGAGATCGAGAAGTGGAAGCATATGGCCCTGAGCTGGGTATGGAAAAAGCAGAAGATGGGGTAATGGCGATGAAGGCGACGCCATTGGAACCAGATGTGGTGATTGAAGGCTGAGGAAGGAATGAGGGAGAGTGGGTATTTATATTGGAAACATGTTTCTGAATTGAAGTACGGAAATCGCCATGGGAGATCAAAGAAAAACAAACAACGAATAGGAAATTGACCAAAGAGAAGGGAGGTTGTCCAGGTGCCTGACAGCACGGCACGTGAACAAACAAGAGCGAAGAATGGGGGGAGGTGGGCGAGGAGGGCAGGCGGGGGAGCGATTTGAGACGCTGAGAGAGAGTGTGTCAGAAACGGTGATGGGGTTGG

mRNA sequence

TAAAACCCTAACTCCCTTTCCTTACCACGTTTCATACTGCTTTCCGATCCCTCTAACTTATCCCTATCTTTGTTGCTTTTAATTTCACGTTGTCTTAGACGAGAAATCGGCAGGGTTTTCTTCCAATCCTGCTCCCATTTCCATGCTTAGCCGTATTCATCAATGGAAGCCATTACATTCTCTGAGGAAATGCGGGATACTCGCTTCTTTTAGTTCTGTGATCCTTGCTAGGCCTTCAGTTTCTGCCGCCCGCCTCGAAGCGGAATCTGTCACTCCCTCCTTCGTTCTGGGCCAGAACGACCCAGTTTGTGAGATTCTTACGGGTTTAAATTCCTTTGGGTTTAGAGCGTATGTTGGTGGATGTAACTTTCGAACTGTAGTTTCTACTTTGAGTGAAACTGTAGTGGACGGCGTTCTTGAGAGTTTGAATATTCAGAATCCTGATGTTGCTGTGGCATTTTTCTATTTGTTGAGAAATAAGTACGGATTTCGGCATTCCGGATTCTCCCAGCTTGCCGTTTCTCATATTCTAGCGGGTAAAGGAAGATTCAAGGAGTTGCATTGCGTTATAAAGCAATTGGTTGAGGAGCAAGGGTCGGGTTCTGCATCTTCCTTTTGTGACCTGCTCTTGAACAAATTCAGGAATTGGGATTCAAATGGTGTGGTATGGGATATGCTGGCATTTGCGTATTCTAGACATGAAATGATCCATGATGCCCTCTTTGTCGTCGCAAAAATGAAGGATCTAAATTTACAAGCTTCAGTTCCAACTTATAACTCTCTATTGCATAACTTAAGGCACACTGATGTCATGTGGGATATATGCAATGAGATCAAAGCTAGTGGAGCTCCTCAGAGTGAATATACTACCTCAATACTTATACACGGCCTATGTGCGCAGTCCAAGTTACAAGATGCGATTTCATTCCTACAGGACAGCAATGAAGTAGTTGGACCTTCTATTGTGTCTATCAATACCGTTATGTCAAAGTTTTGTAAAGTGGGGCTAGTAGATGTTGCAAGGTCATTTTTCTGTTTGATGGTCAAGAATGGACTTCTTCCTGATTCGTACAGTTATAATATTCTTATTCATGGGTTATGTGTAGCAGGTTCCATGGATGAAGCTCTGGAATTCACAGATGACATGGAAAAGCATGGTGTGGAGCCTGATGTAGTAACATACAACACACTTGCTAAAGGTTTTCTCTTGCTTGGTTTTATGAGTGGGGCCTGGAAAGTCGTCCAGAAAATGTTGCTAAAAGGTCTAAATCCGGATATCGTGACATATACAATACTGATATGTGGGCACTGTCAAATGGGAAATATTGAGGAAGCCCTTAAGCTGCGGCAAGAAACCCTTTCAAGGGGGTTTCAGTTGAACATCATTTCTTACAGTGTGCTACTTAGCTGTTTGTGTAAAGTTGGACGAATAGAAGAAGCATTGGCATTGCTCAATGAAATGGAAACTCTACGTTTGAAACCTGATCTTATAGTATATTCAATCCTCATTCATGGCCTCTGCAAGGAAGGGTTTGTACAAAGGGCTTACCAACTATATGAACAAATGCGTTTGAAGAGAAATTTTCCTAACTACTTTGCTCAACGTGCTGTACTTTTGGGTTTCTTTGAGAATGGAAATATTTCTGAGGCAAGAAGATATTTTGATGCTTTGACTCATATGGATCTGATAGAGGATATTATTTTGTATAATATTATGATTGATGGTTACGTAAGGCTTGGTGATATTTCTGAGGCTATGCAGCTATATTACAGAATGTTTGAAAGGGGGATTACTCCAACTGTTGTCACTTTCAACACTCTTGTCCATGGGTTTTGCAGAAATGGAGACCTAGTGGAGGCTCGAAAGATGTTCGAAATCATTAGGTTGAATGGATTGCTACCCAGTGTAGTAACTTATACTACCCTTATGAATGCGTACTGTGAAGCGGGAAACATGCAGGAAATGTTTGATCTACTCCATGAGATGGAAGCAAATGCTGTTGTTCCAACTCATATAACTTATACTGTACTAATCAAAGGACTCTGCAGACAGAATAAAATGCATGAAGCCCTCCAGTTACTTGAGTATATGTATGCAAAGGGTCTAATGCCAGATCAGATTACATATAATACTATTATCCAATGTTTTTGCAAGGCCAGAGACATTGCAAAAGCTTTCCAGGTTTATAATGAGATGTTGCTCCATAATCTTGATCCTACCCATGTAACTTATAATGTACTTATTAGTGGTCTTTGTGTATATGGTGACCTAAAGGATGCTGATCGAATGCTGGTTTCTATGGAGGATCAAAATATTAGCTTGACAAAAGTTGCTTATATGACAATTATTAAGGCACATTGTGCAAAGGGTCAGGTGTCTAAGGCATTAGGGTTCTTCAATCAAATGTTGGCTAAGAGTTTTGTCATTTCCATCAGAGATTATAGTGCTATCATTAATAGGCTGTGCAAAAGGGGTCTAATTACTGAAGCAAAGTACTTATTTGCTATGATGTTATCTGAAGGTGTAACGCCTGATTCTGAAATCTGCGAGACAATGCTTAATGCTTTCCATCAACATGGTGATAGCAGTTCAGCATTTGAATTTCTTGCTGTGATGGATGTAGGGATAATTTTCCCTCCGTGGCATGTATCAAACTTTATGCCTCAGATAAGCAACGAAAGGAAAGTCATGGCAATGACCCTTGTGGACTCTCCCAGCTTGGAGGCTGCAGCAGACAGTCTTATAGAGTGGTTATGACGAGTTGTACTACGAAGTATTAGCTGAGCCTGATTCCTTGCAGCGAGTCGAATAGAAAGTAAGGAATTCTCTGAACCTAGAGGGGCATCACTTTCCGAACTCCCGCCTGTATTTGTTAAGTATGGAGGATGGTCGATACTTGATCCGAAGAGGCAACTATTGATACTTGAAGGGATTTAAAGATAAATCAAACATATTTGATCACTGATAGGATAACTCACAACAAAGAAGAACAAGTGGTAAGATCTTTTTTCCTGTCAGTTATTATATTGATACCAGATGCTGCCCTGATCTTCATGTAAATAAGGAAGAAATTAACGTTTACAATTCGACAGCATAATAAAAGAATTTGTTGAACTTTACCATAATAAAAATTGGCCCTTAATCGTTTGGGTAATTCTCAATTAATTATTTTGGTCTCTCTGAATGTTTCTCAAACACATGAAATGGTTGAACTTTTTCTTTGGGGGTGGGGAAGGAGGTCAAGGAGAGATTGTCGTATATTGATTTTATAAGTTGAGAATTACTGTCAAATGAATGAACTAGGTTAGATTATATTTGTCATCAATATTGTTGATAATACTCAATTAGCCAAGACGTTATGAACTGATTGAAAGAGTTGAAATTTGGAATAGACTAAGATAAACAGTAGACCAGATATTGAAAAGCAAGAACCAACGGAAGACAATTAAGGTTCGGCCAATTTTATTTGAAATAGAGACAAGGCCATACACATGAATTGGCAGGCAGCGAAGTCACTTGGTTGGCGGAGGAAGGCTGGCCAGCTTCTTGGCAAATTCTTGCAGGTTCCTCAATGAACTCCCACTGGGGCCAGTTGCATCCGCCACGGCTTTGCTCAGAGCTCTGGCTTTGGCTTTCAGTTTGTCGGAGTTGAAAGACTCGGCGAGGACCTCTCCCAGTTTGTCCGGGTCAGGCACCGAGTTCTCCCCATGGCAGACTTGCACCGCCACTCCAATCTGATCCACCAATACCTTCGAGTTTATCATTTGGTCTCCTTCCATGGCCCAAGCAAATATTGGTACTCCACTCGCTAGGCTCTCCAGTATAGAGTTCCACCCGCAGTGGCTCAGAAACCCTCTCACGGCTCTGTGCCTCAGGATCGCCTCCTGTGGTACCCATCTCTTCACCACCATTCCACGACCAGACACCCGGTCCTCAAACCCGATTGGGATTCCGTCGGACCCACCATCTGTTTGACGAATTGTCTTAACTACCCACACGAATCGAGTCCCGCTTTTCTCAATCCCGGATGCCAGTGCTTCCATTTGCTGCTGATTCAGTTGCTTTTGACTCCCAAAACTAATGTATAGCACCGAACCATCGGGGCATTCATCAAGCCATTTCAGAACCTCATCTGAACTCGATTCCACAGTTGGGTTGTGCCCTTTGACCAGGCTTAGCGGTCCAACTCCAAATACATTCTCGTTGTTGTTTAATTTCCTGTAGAACTCCAAATACTCGGGCTCCAACTCGTCGAAGGTATTGAAAACATTAGCCCAGCAGGTCCCAGCTTCAAACCAGTCGGCTCTTATGGTACTGAATAGTGGGTCAGAATCCCGGTACACGGTGACAAATTCCGGCAAATCCTGATTAGTGAAGGAGGGGGAATTAGGCAATTCAGCCATATGCTTCACTGGGGATTTACGGAACTCTTCGGAAGGTACGTGACGCCAACAGTAATCGAGGACGTCAACGACCCAACAGCCAGAGGAGAAGAAGGAGACTCTAGGGATTTGAAGCTTTTGGGCGAGAGATTGGGTCCATCCAAGGAAGAAATCAGAAATGATGGCGGAGGGAGGTGAAGGGTGGGATTTGAACCACTCAATAATGGGGTCTTGGAGTTGGCGGAGAGCCACTATGATGGGTACGTTGCCTTCGCCGCCGATGTCTTTGATATTCTCGACGCCGGGAGGCAAACCGGGGACAGAAGGGAAGGGGAGAACAAGGGTTTGGACAGAAGGGTGGGCTGAAAGAAGAGGTTGAAGGATGGGGAGGTTCTTGGGGGTAACCAAAACGGTGATGGGGAACCCATAAGAAGCTAAGAAATGGGTGAGATCGAGAAGTGGAAGCATATGGCCCTGAGCTGGGTATGGAAAAAGCAGAAGATGGGGTAATGGCGATGAAGGCGACGCCATTGGAACCAGATGTGGTGATTGAAGGCTGAGGAAGGAATGAGGGAGAGTGGGTATTTATATTGGAAACATGTTTCTGAATTGAAGTACGGAAATCGCCATGGGAGATCAAAGAAAAACAAACAACGAATAGGAAATTGACCAAAGAGAAGGGAGGTTGTCCAGGTGCCTGACAGCACGGCACGTGAACAAACAAGAGCGAAGAATGGGGGGAGGTGGGCGAGGAGGGCAGGCGGGGGAGCGATTTGAGACGCTGAGAGAGAGTGTGTCAGAAACGGTGATGGGGTTGG

Coding sequence (CDS)

ATGCTTAGCCGTATTCATCAATGGAAGCCATTACATTCTCTGAGGAAATGCGGGATACTCGCTTCTTTTAGTTCTGTGATCCTTGCTAGGCCTTCAGTTTCTGCCGCCCGCCTCGAAGCGGAATCTGTCACTCCCTCCTTCGTTCTGGGCCAGAACGACCCAGTTTGTGAGATTCTTACGGGTTTAAATTCCTTTGGGTTTAGAGCGTATGTTGGTGGATGTAACTTTCGAACTGTAGTTTCTACTTTGAGTGAAACTGTAGTGGACGGCGTTCTTGAGAGTTTGAATATTCAGAATCCTGATGTTGCTGTGGCATTTTTCTATTTGTTGAGAAATAAGTACGGATTTCGGCATTCCGGATTCTCCCAGCTTGCCGTTTCTCATATTCTAGCGGGTAAAGGAAGATTCAAGGAGTTGCATTGCGTTATAAAGCAATTGGTTGAGGAGCAAGGGTCGGGTTCTGCATCTTCCTTTTGTGACCTGCTCTTGAACAAATTCAGGAATTGGGATTCAAATGGTGTGGTATGGGATATGCTGGCATTTGCGTATTCTAGACATGAAATGATCCATGATGCCCTCTTTGTCGTCGCAAAAATGAAGGATCTAAATTTACAAGCTTCAGTTCCAACTTATAACTCTCTATTGCATAACTTAAGGCACACTGATGTCATGTGGGATATATGCAATGAGATCAAAGCTAGTGGAGCTCCTCAGAGTGAATATACTACCTCAATACTTATACACGGCCTATGTGCGCAGTCCAAGTTACAAGATGCGATTTCATTCCTACAGGACAGCAATGAAGTAGTTGGACCTTCTATTGTGTCTATCAATACCGTTATGTCAAAGTTTTGTAAAGTGGGGCTAGTAGATGTTGCAAGGTCATTTTTCTGTTTGATGGTCAAGAATGGACTTCTTCCTGATTCGTACAGTTATAATATTCTTATTCATGGGTTATGTGTAGCAGGTTCCATGGATGAAGCTCTGGAATTCACAGATGACATGGAAAAGCATGGTGTGGAGCCTGATGTAGTAACATACAACACACTTGCTAAAGGTTTTCTCTTGCTTGGTTTTATGAGTGGGGCCTGGAAAGTCGTCCAGAAAATGTTGCTAAAAGGTCTAAATCCGGATATCGTGACATATACAATACTGATATGTGGGCACTGTCAAATGGGAAATATTGAGGAAGCCCTTAAGCTGCGGCAAGAAACCCTTTCAAGGGGGTTTCAGTTGAACATCATTTCTTACAGTGTGCTACTTAGCTGTTTGTGTAAAGTTGGACGAATAGAAGAAGCATTGGCATTGCTCAATGAAATGGAAACTCTACGTTTGAAACCTGATCTTATAGTATATTCAATCCTCATTCATGGCCTCTGCAAGGAAGGGTTTGTACAAAGGGCTTACCAACTATATGAACAAATGCGTTTGAAGAGAAATTTTCCTAACTACTTTGCTCAACGTGCTGTACTTTTGGGTTTCTTTGAGAATGGAAATATTTCTGAGGCAAGAAGATATTTTGATGCTTTGACTCATATGGATCTGATAGAGGATATTATTTTGTATAATATTATGATTGATGGTTACGTAAGGCTTGGTGATATTTCTGAGGCTATGCAGCTATATTACAGAATGTTTGAAAGGGGGATTACTCCAACTGTTGTCACTTTCAACACTCTTGTCCATGGGTTTTGCAGAAATGGAGACCTAGTGGAGGCTCGAAAGATGTTCGAAATCATTAGGTTGAATGGATTGCTACCCAGTGTAGTAACTTATACTACCCTTATGAATGCGTACTGTGAAGCGGGAAACATGCAGGAAATGTTTGATCTACTCCATGAGATGGAAGCAAATGCTGTTGTTCCAACTCATATAACTTATACTGTACTAATCAAAGGACTCTGCAGACAGAATAAAATGCATGAAGCCCTCCAGTTACTTGAGTATATGTATGCAAAGGGTCTAATGCCAGATCAGATTACATATAATACTATTATCCAATGTTTTTGCAAGGCCAGAGACATTGCAAAAGCTTTCCAGGTTTATAATGAGATGTTGCTCCATAATCTTGATCCTACCCATGTAACTTATAATGTACTTATTAGTGGTCTTTGTGTATATGGTGACCTAAAGGATGCTGATCGAATGCTGGTTTCTATGGAGGATCAAAATATTAGCTTGACAAAAGTTGCTTATATGACAATTATTAAGGCACATTGTGCAAAGGGTCAGGTGTCTAAGGCATTAGGGTTCTTCAATCAAATGTTGGCTAAGAGTTTTGTCATTTCCATCAGAGATTATAGTGCTATCATTAATAGGCTGTGCAAAAGGGGTCTAATTACTGAAGCAAAGTACTTATTTGCTATGATGTTATCTGAAGGTGTAACGCCTGATTCTGAAATCTGCGAGACAATGCTTAATGCTTTCCATCAACATGGTGATAGCAGTTCAGCATTTGAATTTCTTGCTGTGATGGATGTAGGGATAATTTTCCCTCCGTGGCATGTATCAAACTTTATGCCTCAGATAAGCAACGAAAGGAAAGTCATGGCAATGACCCTTGTGGACTCTCCCAGCTTGGAGGCTGCAGCAGACAGTCTTATAGAGTGGTTATGA

Protein sequence

MLSRIHQWKPLHSLRKCGILASFSSVILARPSVSAARLEAESVTPSFVLGQNDPVCEILTGLNSFGFRAYVGGCNFRTVVSTLSETVVDGVLESLNIQNPDVAVAFFYLLRNKYGFRHSGFSQLAVSHILAGKGRFKELHCVIKQLVEEQGSGSASSFCDLLLNKFRNWDSNGVVWDMLAFAYSRHEMIHDALFVVAKMKDLNLQASVPTYNSLLHNLRHTDVMWDICNEIKASGAPQSEYTTSILIHGLCAQSKLQDAISFLQDSNEVVGPSIVSINTVMSKFCKVGLVDVARSFFCLMVKNGLLPDSYSYNILIHGLCVAGSMDEALEFTDDMEKHGVEPDVVTYNTLAKGFLLLGFMSGAWKVVQKMLLKGLNPDIVTYTILICGHCQMGNIEEALKLRQETLSRGFQLNIISYSVLLSCLCKVGRIEEALALLNEMETLRLKPDLIVYSILIHGLCKEGFVQRAYQLYEQMRLKRNFPNYFAQRAVLLGFFENGNISEARRYFDALTHMDLIEDIILYNIMIDGYVRLGDISEAMQLYYRMFERGITPTVVTFNTLVHGFCRNGDLVEARKMFEIIRLNGLLPSVVTYTTLMNAYCEAGNMQEMFDLLHEMEANAVVPTHITYTVLIKGLCRQNKMHEALQLLEYMYAKGLMPDQITYNTIIQCFCKARDIAKAFQVYNEMLLHNLDPTHVTYNVLISGLCVYGDLKDADRMLVSMEDQNISLTKVAYMTIIKAHCAKGQVSKALGFFNQMLAKSFVISIRDYSAIINRLCKRGLITEAKYLFAMMLSEGVTPDSEICETMLNAFHQHGDSSSAFEFLAVMDVGIIFPPWHVSNFMPQISNERKVMAMTLVDSPSLEAAADSLIEWL
Homology
[Close]
BLAST of Carg01777 vs. NCBI nr
Match: XP_022956868.1 (putative pentatricopeptide repeat-containing protein At1g13630 isoform X1 [Cucurbita moschata] >XP_022956869.1 putative pentatricopeptide repeat-containing protein At1g13630 isoform X1 [Cucurbita moschata] >XP_022956870.1 putative pentatricopeptide repeat-containing protein At1g13630 isoform X1 [Cucurbita moschata] >XP_022956871.1 putative pentatricopeptide repeat-containing protein At1g13630 isoform X1 [Cucurbita moschata])

HSP 1 Score: 614.8 bits (1584), Expect = 4.6e-172
Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 0 

Query: 1   MLSRIHQWKPLHSLRKCGILASFSSVILARPSVSAARLEAESVTPSFVLGQNDPVCEILT 60
           MLSRIHQWKPLHSLRKCGILASFSSVILARPSVSAARLEAESVTPSFVLGQNDPVCEILT
Sbjct: 1   MLSRIHQWKPLHSLRKCGILASFSSVILARPSVSAARLEAESVTPSFVLGQNDPVCEILT 60

Query: 61  GLNSFGFRAYVGGCNFRTVVSTLSETVVDGVLESLNIQNPDVAVAFFYLLRNKYGFRHSG 120
           GLNSFGFRAYVGGCNFRTVVSTLSETVVDGVLESLNIQNPDVAVAFFYLLRNKYGFRHSG
Sbjct: 61  GLNSFGFRAYVGGCNFRTVVSTLSETVVDGVLESLNIQNPDVAVAFFYLLRNKYGFRHSG 120

Query: 121 FSQLAVSHILAGKGRFKELHCVIKQLVEEQGSGSASSFCDLLLNKFRNWDSNGVVWDMLA 180
           FSQLAVSHILAGKGRFKELHCVIKQLVEEQGSGSASSFCDLLLNKFRNWDSNGVVWDMLA
Sbjct: 121 FSQLAVSHILAGKGRFKELHCVIKQLVEEQGSGSASSFCDLLLNKFRNWDSNGVVWDMLA 180

Query: 181 FAYSRHEMIHDALFVVAKMKDLNLQASVPTYNSLLHNLRHTDVMWDICNEIKASGAPQSE 240
           FAYSRHEMIHDALFVVAKMKDLNLQASVPTYNSLLHNLRHTDVMWDICNEIKASGAPQSE
Sbjct: 181 FAYSRHEMIHDALFVVAKMKDLNLQASVPTYNSLLHNLRHTDVMWDICNEIKASGAPQSE 240

Query: 241 YTTSILIHGLCAQSKLQDAISFLQDSNEVVGPSIVSINTVMSKFCKVGLVDVARSFFCLM 300
           YTTSILIHGLCAQSKLQDAISFLQDSNEVVGPSIVSINTVMSKFCKVGLVDVARSFFCLM
Sbjct: 241 YTTSILIHGLCAQSKLQDAISFLQDSNEVVGPSIVSINTVMSKFCKVGLVDVARSFFCLM 300

Query: 301 VKNGLL 307
           VKNGLL
Sbjct: 301 VKNGLL 306

[Close]
BLAST of Carg01777 vs. NCBI nr
Match: XP_023536817.1 (putative pentatricopeptide repeat-containing protein At1g13630 [Cucurbita pepo subsp. pepo] >XP_023536825.1 putative pentatricopeptide repeat-containing protein At1g13630 [Cucurbita pepo subsp. pepo] >XP_023536834.1 putative pentatricopeptide repeat-containing protein At1g13630 [Cucurbita pepo subsp. pepo] >XP_023536842.1 putative pentatricopeptide repeat-containing protein At1g13630 [Cucurbita pepo subsp. pepo] >XP_023536850.1 putative pentatricopeptide repeat-containing protein At1g13630 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 605.1 bits (1559), Expect = 3.7e-169
Identity = 301/306 (98.37%), Postives = 304/306 (99.35%), Query Frame = 0 

Query: 1   MLSRIHQWKPLHSLRKCGILASFSSVILARPSVSAARLEAESVTPSFVLGQNDPVCEILT 60
           MLSRIHQWKPLH LRKCGILASFSSVILARPSVSAARLEAESVTPSFVLGQNDPV EILT
Sbjct: 1   MLSRIHQWKPLHFLRKCGILASFSSVILARPSVSAARLEAESVTPSFVLGQNDPVREILT 60

Query: 61  GLNSFGFRAYVGGCNFRTVVSTLSETVVDGVLESLNIQNPDVAVAFFYLLRNKYGFRHSG 120
           GLNSFGFRAYVGGCNFRTVVSTLSETVVDGVLESL+IQNPDVAVAFFYLLRNKYGFRHSG
Sbjct: 61  GLNSFGFRAYVGGCNFRTVVSTLSETVVDGVLESLSIQNPDVAVAFFYLLRNKYGFRHSG 120

Query: 121 FSQLAVSHILAGKGRFKELHCVIKQLVEEQGSGSASSFCDLLLNKFRNWDSNGVVWDMLA 180
           FSQLAVSHILAGKGRFKELHCVIKQLVEEQGSGSASSFCDLLLNKFRNWDSNGVVWDMLA
Sbjct: 121 FSQLAVSHILAGKGRFKELHCVIKQLVEEQGSGSASSFCDLLLNKFRNWDSNGVVWDMLA 180

Query: 181 FAYSRHEMIHDALFVVAKMKDLNLQASVPTYNSLLHNLRHTDVMWDICNEIKASGAPQSE 240
           FAYSRHEMIHDALFV+AKMKDLNLQASVPTYNSLLHNLRHTDVMWDICNE+KASGAPQSE
Sbjct: 181 FAYSRHEMIHDALFVIAKMKDLNLQASVPTYNSLLHNLRHTDVMWDICNEVKASGAPQSE 240

Query: 241 YTTSILIHGLCAQSKLQDAISFLQDSNEVVGPSIVSINTVMSKFCKVGLVDVARSFFCLM 300
           YTTSILIHGLCAQSKLQDAISFLQDSNEVVGPSIVSINTVMSKFCKVGLVDVARSFFCLM
Sbjct: 241 YTTSILIHGLCAQSKLQDAISFLQDSNEVVGPSIVSINTVMSKFCKVGLVDVARSFFCLM 300

Query: 301 VKNGLL 307
           VKNGLL
Sbjct: 301 VKNGLL 306

[Close]
BLAST of Carg01777 vs. NCBI nr
Match: XP_022977564.1 (putative pentatricopeptide repeat-containing protein At1g13630 [Cucurbita maxima] >XP_022977572.1 putative pentatricopeptide repeat-containing protein At1g13630 [Cucurbita maxima] >XP_022977580.1 putative pentatricopeptide repeat-containing protein At1g13630 [Cucurbita maxima])

HSP 1 Score: 589.0 bits (1517), Expect = 2.7e-164
Identity = 295/306 (96.41%), Postives = 299/306 (97.71%), Query Frame = 0 

Query: 1   MLSRIHQWKPLHSLRKCGILASFSSVILARPSVSAARLEAESVTPSFVLGQNDPVCEILT 60
           MLSRIHQWKP H LRKCGIL SFSSVILARPSVS+ARLEAESVTPSFVLGQNDPV EILT
Sbjct: 1   MLSRIHQWKPFHFLRKCGILDSFSSVILARPSVSSARLEAESVTPSFVLGQNDPVREILT 60

Query: 61  GLNSFGFRAYVGGCNFRTVVSTLSETVVDGVLESLNIQNPDVAVAFFYLLRNKYGFRHSG 120
           GLNSFGFRAYVGG NF+TVVSTLSETVVDGVLESL IQNPDVAVAFFYLLRNKYGFRHSG
Sbjct: 61  GLNSFGFRAYVGGRNFQTVVSTLSETVVDGVLESLTIQNPDVAVAFFYLLRNKYGFRHSG 120

Query: 121 FSQLAVSHILAGKGRFKELHCVIKQLVEEQGSGSASSFCDLLLNKFRNWDSNGVVWDMLA 180
           FSQLAVSHILAGKGRFKEL CVIKQLVEEQGSGSASSFCDLLLNKFRNWDSNGVVWDMLA
Sbjct: 121 FSQLAVSHILAGKGRFKELRCVIKQLVEEQGSGSASSFCDLLLNKFRNWDSNGVVWDMLA 180

Query: 181 FAYSRHEMIHDALFVVAKMKDLNLQASVPTYNSLLHNLRHTDVMWDICNEIKASGAPQSE 240
           FAYSRHEMIHDALFV+AKMKDLNLQASVPTYNSLLHNLRHTDVMWDICNEIKASGAPQSE
Sbjct: 181 FAYSRHEMIHDALFVIAKMKDLNLQASVPTYNSLLHNLRHTDVMWDICNEIKASGAPQSE 240

Query: 241 YTTSILIHGLCAQSKLQDAISFLQDSNEVVGPSIVSINTVMSKFCKVGLVDVARSFFCLM 300
           YTTSILIHGLCAQSKLQ+AISFLQDSNEVVGPSIVSINTVMSKFCKVGLVDVARSFFCLM
Sbjct: 241 YTTSILIHGLCAQSKLQNAISFLQDSNEVVGPSIVSINTVMSKFCKVGLVDVARSFFCLM 300

Query: 301 VKNGLL 307
           VKNGLL
Sbjct: 301 VKNGLL 306

[Close]
BLAST of Carg01777 vs. NCBI nr
Match: XP_022149078.1 (putative pentatricopeptide repeat-containing protein At1g13630 isoform X1 [Momordica charantia] >XP_022149079.1 putative pentatricopeptide repeat-containing protein At1g13630 isoform X1 [Momordica charantia] >XP_022149080.1 putative pentatricopeptide repeat-containing protein At1g13630 isoform X1 [Momordica charantia])

HSP 1 Score: 502.3 bits (1292), Expect = 3.3e-138
Identity = 246/306 (80.39%), Postives = 271/306 (88.56%), Query Frame = 0 

Query: 1   MLSRIHQWKPLHSLRKCGILASFSSVILARPSVSAARLEAESVTPSFVLGQNDPVCEILT 60
           ML+RIHQW+P + LR CG+LASFSSVI ARPS SAA LE ES+  S VL QNDPV EILT
Sbjct: 1   MLNRIHQWRPFYLLRNCGMLASFSSVIFARPSASAAHLEEESI--SIVLSQNDPVREILT 60

Query: 61  GLNSFGFRAYVGGCNFRTVVSTLSETVVDGVLESLNIQNPDVAVAFFYLLRNKYGFRHSG 120
           GLN FGF AY GGCNFRT+V TLSETVVD V+ SL  +N D AVAFFYLLRN+Y FRHS 
Sbjct: 61  GLNFFGFGAYTGGCNFRTIVPTLSETVVDDVIGSLKTRNTDFAVAFFYLLRNEYMFRHSE 120

Query: 121 FSQLAVSHILAGKGRFKELHCVIKQLVEEQGSGSASSFCDLLLNKFRNWDSNGVVWDMLA 180
           FSQ AVSHILAGK RFKELH V+KQL+E+QGSGSA SFCDLLLNKFRNWDSNGVVWDMLA
Sbjct: 121 FSQFAVSHILAGKRRFKELHSVMKQLLEDQGSGSAPSFCDLLLNKFRNWDSNGVVWDMLA 180

Query: 181 FAYSRHEMIHDALFVVAKMKDLNLQASVPTYNSLLHNLRHTDVMWDICNEIKASGAPQSE 240
           FAYSRH+MIHDALFV+AKMK LNLQAS+PTYNSLLHNLRHTD+MWDI NEIK SG PQSE
Sbjct: 181 FAYSRHQMIHDALFVIAKMKGLNLQASIPTYNSLLHNLRHTDIMWDIYNEIKVSGTPQSE 240

Query: 241 YTTSILIHGLCAQSKLQDAISFLQDSNEVVGPSIVSINTVMSKFCKVGLVDVARSFFCLM 300
           YT+SIL+HGLC QSKL+DAISFL+DS+E VGPSIVS NT+MSKFCK+GL+DVA+SFFCLM
Sbjct: 241 YTSSILVHGLCEQSKLRDAISFLEDSDEAVGPSIVSFNTIMSKFCKMGLIDVAKSFFCLM 300

Query: 301 VKNGLL 307
           VKNGLL
Sbjct: 301 VKNGLL 304

[Close]
BLAST of Carg01777 vs. NCBI nr
Match: XP_008465042.1 (PREDICTED: putative pentatricopeptide repeat-containing protein At1g13630 [Cucumis melo] >XP_008465043.1 PREDICTED: putative pentatricopeptide repeat-containing protein At1g13630 [Cucumis melo] >XP_008465047.1 PREDICTED: putative pentatricopeptide repeat-containing protein At1g13630 [Cucumis melo] >XP_016903312.1 PREDICTED: putative pentatricopeptide repeat-containing protein At1g13630 [Cucumis melo] >XP_016903313.1 PREDICTED: putative pentatricopeptide repeat-containing protein At1g13630 [Cucumis melo])

HSP 1 Score: 501.9 bits (1291), Expect = 4.4e-138
Identity = 255/308 (82.79%), Postives = 271/308 (87.99%), Query Frame = 0 

Query: 1   MLSRIHQWKPLHSLRKCGILASFSSVILARP--SVSAARLEAESVTPSFVLGQNDPVCEI 60
           MLSRIHQWKPLH +         SSVILARP  SVSAARLE  +VT SF   QND V EI
Sbjct: 1   MLSRIHQWKPLHWI-------FASSVILARPSVSVSAARLEPATVTTSFFPDQNDSVREI 60

Query: 61  LTGLNSFGFRAYVGGCNFRTVVSTLSETVVDGVLESLNIQNPDVAVAFFYLLRNKYGFRH 120
           LTGLNS GFRAYVGGCNFRTVVSTLSETVVDGVL+SL    PDVAVAFFYLL N+YGFRH
Sbjct: 61  LTGLNSLGFRAYVGGCNFRTVVSTLSETVVDGVLDSLRTLKPDVAVAFFYLLINEYGFRH 120

Query: 121 SGFSQLAVSHILAGKGRFKELHCVIKQLVEEQGSGSASSFCDLLLNKFRNWDSNGVVWDM 180
           S FSQ  VSHILAG+GRFKELH VIK L+EEQG GSAS+FCDLLLNKFRNWDSNGVVWDM
Sbjct: 121 SRFSQFVVSHILAGEGRFKELHSVIKHLIEEQGLGSASTFCDLLLNKFRNWDSNGVVWDM 180

Query: 181 LAFAYSRHEMIHDALFVVAKMKDLNLQASVPTYNSLLHNLRHTDVMWDICNEIKASGAPQ 240
           LAFAYSRHEMIHDALFV AKMKDLNLQASVPTYNSLLHNLRHTD++WD+ NEIK SGAPQ
Sbjct: 181 LAFAYSRHEMIHDALFVFAKMKDLNLQASVPTYNSLLHNLRHTDIIWDVYNEIKVSGAPQ 240

Query: 241 SEYTTSILIHGLCAQSKLQDAISFLQDSNEVVGPSIVSINTVMSKFCKVGLVDVARSFFC 300
           SEYTTSILIHGLC QSK++DAISFLQDSNEVVGPS VSINT+MSKFCKVGL+DVARSFFC
Sbjct: 241 SEYTTSILIHGLCEQSKIEDAISFLQDSNEVVGPSTVSINTIMSKFCKVGLIDVARSFFC 300

Query: 301 LMVKNGLL 307
           L+VK+GLL
Sbjct: 301 LLVKSGLL 301

[Close]
BLAST of Carg01777 vs. TAIR10
Match: AT1G13630.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 192.6 bits (488), Expect = 1.0e-48
Identity = 98/220 (44.55%), Postives = 144/220 (65.45%), Query Frame = 0 

Query: 57  EILTGLNSFGFRAYVGGCNFRTVVSTLSETVVDGVLESLNIQNPDVAVAFFYLLRNKYGF 116
           EIL G+   GFR ++ G +FR +VS L    V+ +++ L  ++ D++V FF  LR+ Y F
Sbjct: 21  EILFGMKKIGFREFLHGYHFRGLVSELRHVHVEEIMDELMSESSDLSVWFFKELRDIYAF 80

Query: 117 RHSGFSQLAVSHILAGKGRFKELHCVIKQLVEEQGSGSASSFCDLLLNKFRNWDSNGVVW 176
           RHS FS L VSH+LAG+ RFKEL  +++QL++E+G+             FR W+S G+VW
Sbjct: 81  RHSSFSTLLVSHVLAGQRRFKELQVILEQLLQEEGT-------------FRKWESTGLVW 140

Query: 177 DMLAFAYSRHEMIHDALFVVAKMKDLNLQASVPTYNSLLHNLRHTDVMWDICNEIKASGA 236
           DML F  SR  M+ D+L+++ KMKD NL  S  +YNS+L++ R TD MWD+  EIK    
Sbjct: 141 DMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIK---- 200

Query: 237 PQSEYTTSILIHGLCAQSKLQDAISFLQDSN-EVVGPSIV 276
            ++E+T S ++ GLC Q KL+DA+ FL+ S  + +GPS+V
Sbjct: 201 DKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVV 223

[Close]
BLAST of Carg01777 vs. Swiss-Prot
Match: sp|Q9LMY5|PPR41_ARATH (Putative pentatricopeptide repeat-containing protein At1g13630 OS=Arabidopsis thaliana OX=3702 GN=At1g13630 PE=3 SV=3)

HSP 1 Score: 217.6 bits (553), Expect = 5.4e-55
Identity = 115/273 (42.12%), Postives = 174/273 (63.74%), Query Frame = 0 

Query: 5   IHQWKPLHSLRKCGILASFSSVILARPSVSAARLEAESV-TPSFVLGQNDPVCEILTGLN 64
           I +W   +S +    L+ FSS++  + S S A+++ ES+ T +          EIL G+ 
Sbjct: 2   ICRWIAFNSSKVSRSLSPFSSLLFTKSSFSVAKMDDESLPTTNSTSDHRGFYKEILFGMK 61

Query: 65  SFGFRAYVGGCNFRTVVSTLSETVVDGVLESLNIQNPDVAVAFFYLLRNKYGFRHSGFSQ 124
             GFR ++ G +FR +VS L    V+ +++ L  ++ D++V FF  LR+ Y FRHS FS 
Sbjct: 62  KIGFREFLHGYHFRGLVSELRHVHVEEIMDELMSESSDLSVWFFKELRDIYAFRHSSFST 121

Query: 125 LAVSHILAGKGRFKELHCVIKQLVEEQGSGSASSFCDLLLNKFRNWDSNGVVWDMLAFAY 184
           L VSH+LAG+ RFKEL  +++QL++E+G     + C+LL N FR W+S G+VWDML F  
Sbjct: 122 LLVSHVLAGQRRFKELQVILEQLLQEEG-----TLCELLSNSFRKWESTGLVWDMLLFLS 181

Query: 185 SRHEMIHDALFVVAKMKDLNLQASVPTYNSLLHNLRHTDVMWDICNEIKASGAPQSEYTT 244
           SR  M+ D+L+++ KMKD NL  S  +YNS+L++ R TD MWD+  EIK     ++E+T 
Sbjct: 182 SRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIK----DKNEHTY 241

Query: 245 SILIHGLCAQSKLQDAISFLQDSN-EVVGPSIV 276
           S ++ GLC Q KL+DA+ FL+ S  + +GPS+V
Sbjct: 242 STVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVV 265

[Close]
BLAST of Carg01777 vs. TrEMBL
Match: tr|A0A1S3CNC6|A0A1S3CNC6_CUCME (putative pentatricopeptide repeat-containing protein At1g13630 OS=Cucumis melo OX=3656 GN=LOC103502754 PE=4 SV=1)

HSP 1 Score: 501.9 bits (1291), Expect = 2.9e-138
Identity = 255/308 (82.79%), Postives = 271/308 (87.99%), Query Frame = 0 

Query: 1   MLSRIHQWKPLHSLRKCGILASFSSVILARP--SVSAARLEAESVTPSFVLGQNDPVCEI 60
           MLSRIHQWKPLH +         SSVILARP  SVSAARLE  +VT SF   QND V EI
Sbjct: 1   MLSRIHQWKPLHWI-------FASSVILARPSVSVSAARLEPATVTTSFFPDQNDSVREI 60

Query: 61  LTGLNSFGFRAYVGGCNFRTVVSTLSETVVDGVLESLNIQNPDVAVAFFYLLRNKYGFRH 120
           LTGLNS GFRAYVGGCNFRTVVSTLSETVVDGVL+SL    PDVAVAFFYLL N+YGFRH
Sbjct: 61  LTGLNSLGFRAYVGGCNFRTVVSTLSETVVDGVLDSLRTLKPDVAVAFFYLLINEYGFRH 120

Query: 121 SGFSQLAVSHILAGKGRFKELHCVIKQLVEEQGSGSASSFCDLLLNKFRNWDSNGVVWDM 180
           S FSQ  VSHILAG+GRFKELH VIK L+EEQG GSAS+FCDLLLNKFRNWDSNGVVWDM
Sbjct: 121 SRFSQFVVSHILAGEGRFKELHSVIKHLIEEQGLGSASTFCDLLLNKFRNWDSNGVVWDM 180

Query: 181 LAFAYSRHEMIHDALFVVAKMKDLNLQASVPTYNSLLHNLRHTDVMWDICNEIKASGAPQ 240
           LAFAYSRHEMIHDALFV AKMKDLNLQASVPTYNSLLHNLRHTD++WD+ NEIK SGAPQ
Sbjct: 181 LAFAYSRHEMIHDALFVFAKMKDLNLQASVPTYNSLLHNLRHTDIIWDVYNEIKVSGAPQ 240

Query: 241 SEYTTSILIHGLCAQSKLQDAISFLQDSNEVVGPSIVSINTVMSKFCKVGLVDVARSFFC 300
           SEYTTSILIHGLC QSK++DAISFLQDSNEVVGPS VSINT+MSKFCKVGL+DVARSFFC
Sbjct: 241 SEYTTSILIHGLCEQSKIEDAISFLQDSNEVVGPSTVSINTIMSKFCKVGLIDVARSFFC 300

Query: 301 LMVKNGLL 307
           L+VK+GLL
Sbjct: 301 LLVKSGLL 301

[Close]
BLAST of Carg01777 vs. TrEMBL
Match: tr|A0A0A0L9A2|A0A0A0L9A2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G642640 PE=4 SV=1)

HSP 1 Score: 484.2 bits (1245), Expect = 6.2e-133
Identity = 249/308 (80.84%), Postives = 263/308 (85.39%), Query Frame = 0 

Query: 1   MLSRIHQWKPLHSLRKCGILASFSSVILARP--SVSAARLEAESVTPSFVLGQNDPVCEI 60
           MLSR HQ KPLH      I AS SSVILARP  SVSAARLE  +VT SFV  QND V EI
Sbjct: 1   MLSRAHQCKPLH-----WIFASLSSVILARPSVSVSAARLEPATVTTSFVSDQNDSVREI 60

Query: 61  LTGLNSFGFRAYVGGCNFRTVVSTLSETVVDGVLESLNIQNPDVAVAFFYLLRNKYGFRH 120
           L GLNS GFRAYVGGCNFRTVVSTLSETVVDGVL+ L    PDVAVAFFY L N+YGFRH
Sbjct: 61  LIGLNSLGFRAYVGGCNFRTVVSTLSETVVDGVLDRLRTLKPDVAVAFFYFLINEYGFRH 120

Query: 121 SGFSQLAVSHILAGKGRFKELHCVIKQLVEEQGSGSASSFCDLLLNKFRNWDSNGVVWDM 180
           S FSQ  VSHILAGKGRFKEL  VIK L+ +QG GSAS  CDLLL KFRNWDSNG+VWDM
Sbjct: 121 SIFSQFVVSHILAGKGRFKELDSVIKNLIVDQGLGSASIICDLLLEKFRNWDSNGLVWDM 180

Query: 181 LAFAYSRHEMIHDALFVVAKMKDLNLQASVPTYNSLLHNLRHTDVMWDICNEIKASGAPQ 240
           LAFAYSRHEMIHDALFV+AKMKDLN QASVPTYNSLLHN+RHTD+MWD+ NEIK SGAPQ
Sbjct: 181 LAFAYSRHEMIHDALFVIAKMKDLNFQASVPTYNSLLHNMRHTDIMWDVYNEIKVSGAPQ 240

Query: 241 SEYTTSILIHGLCAQSKLQDAISFLQDSNEVVGPSIVSINTVMSKFCKVGLVDVARSFFC 300
           SE TTSILIHGLC QSKL+DAISFL DSN+VVGPSIVSINT+MSKFCKVGL+DVARSFFC
Sbjct: 241 SECTTSILIHGLCEQSKLEDAISFLHDSNKVVGPSIVSINTIMSKFCKVGLIDVARSFFC 300

Query: 301 LMVKNGLL 307
           LMVKNGLL
Sbjct: 301 LMVKNGLL 303

[Close]
BLAST of Carg01777 vs. TrEMBL
Match: tr|A0A2P5DTW7|A0A2P5DTW7_9ROSA (Tetratricopeptide-like helical domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_241820 PE=4 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 2.1e-96
Identity = 182/302 (60.26%), Postives = 235/302 (77.81%), Query Frame = 0 

Query: 1   MLSRIHQW-KPLHSLRKCGILASFSSVILARPSVSAARLEAESVTPSFVLGQNDPVCEIL 60
           M + IH+W KPL  ++K  IL+S SS+I  +PSVSAA+++ +      V    D V EIL
Sbjct: 1   MPNHIHRWKKPLIFVQKSRILSSLSSLIFTKPSVSAAKVDNDD--DPIVQKDRDAVSEIL 60

Query: 61  TGLNSFGFRAYVGGCNFRTVVSTLSETVVDGVLESLNIQNPDVAVAFFYLLRNKYGFRHS 120
           +GL S G R+++GG  FRT+ STL++  VD V++SL  ++PD A+ FF+ L N YGFRHS
Sbjct: 61  SGLKSLGLRSFLGGDYFRTIFSTLNQPQVDLVIDSLRAESPDFALGFFFSLSNVYGFRHS 120

Query: 121 GFSQLAVSHILAGKGRFKELHCVIKQLVEEQGSGSASSFCDLLLNKFRNWDSNGVVWDML 180
            FS+L VSH+LA K  F+EL  VIKQ+VEE+GSGSASS C+LLL++F +WD+NGVVWDML
Sbjct: 121 TFSRLVVSHVLASKCWFEELRLVIKQMVEEEGSGSASSVCELLLDRFGDWDANGVVWDML 180

Query: 181 AFAYSRHEMIHDALFVVAKMKDLNLQASVPTYNSLLHNLRHTDVMWDICNEIKASGAPQS 240
           AFAYSR EM+HD LFV+AKMKDLNL  S+ TYN LL+NLRHTD+MWD+ +EIK+SG PQ+
Sbjct: 181 AFAYSRSEMVHDVLFVLAKMKDLNLYVSLSTYNCLLYNLRHTDIMWDVFDEIKSSGIPQN 240

Query: 241 EYTTSILIHGLCAQSKLQDAISFLQDSNE-VVGPSIVSINTVMSKFCKVGLVDVARSFFC 300
           EYT SILI GLC QSK++DAI FL+++ E   GPS VS NT+MS+FCK+G VDVA+SFFC
Sbjct: 241 EYTDSILIDGLCKQSKIEDAILFLRNTKEKEPGPSSVSFNTIMSRFCKLGFVDVAKSFFC 300

[Close]
BLAST of Carg01777 vs. TrEMBL
Match: tr|A0A2I4DXY8|A0A2I4DXY8_9ROSI (putative pentatricopeptide repeat-containing protein At1g13630 isoform X1 OS=Juglans regia OX=51240 GN=LOC108984477 PE=4 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 4.8e-93
Identity = 176/307 (57.33%), Postives = 226/307 (73.62%), Query Frame = 0 

Query: 1   MLSRIHQWK-PLHSLRKCGILASFSSVILARPSVSAARLEAESVTPSFVLGQNDPVCEIL 60
           ML  + QWK  LH   +   L   SS++  +PSVSAA+LE E  + S +   +D V EIL
Sbjct: 1   MLHHLRQWKNSLHFPARFRTLLPLSSILFTKPSVSAAKLEDEPASSSAIPNTSDTVGEIL 60

Query: 61  TGLNSFGFRAYVGGCNFRTVVSTLSETVVDGVLESLNIQNPDVAVAFFYLLRNKYGFRHS 120
            GL SFG R +  G  FRTVV TL+ T VD +++ L +++PD AV FF+LL+++Y FRHS
Sbjct: 61  AGLRSFGLRRFFRGDYFRTVVLTLNWTQVDQIIDVLRVESPDFAVDFFHLLKDRYQFRHS 120

Query: 121 GFSQLAVSHILAGKGRFKELHCVIKQLVEEQGSGSASSFCDLLLNKFRNWDSNGVVWDML 180
             S+  VSH+LA K RFKE+  +IKQ+VEE+GSGSA S C+LLLN FR WDSN V+WDML
Sbjct: 121 RASRFIVSHVLAEKTRFKEMQLIIKQMVEEEGSGSAPSLCELLLNSFRGWDSNTVIWDML 180

Query: 181 AFAYSRHEMIHDALFVVAKMKDLNLQASVPTYNSLLHNLRHTDVMWDICNEIKASGAPQS 240
           AF YSR EM+ DALFV+AKMKDLN+ AS+ TYNSLLHNLR T+ MWD+  +IK SG  Q+
Sbjct: 181 AFGYSRFEMVQDALFVLAKMKDLNMHASIQTYNSLLHNLRRTETMWDMHTDIKVSGTFQN 240

Query: 241 EYTTSILIHGLCAQSKLQDAISFLQD-SNEVVGPSIVSINTVMSKFCKVGLVDVARSFFC 300
           EYT SI++ GLC QS+LQDA+S+LQD   +  G SIVS NT+MS+FC +G VDVA+SFFC
Sbjct: 241 EYTHSIIVDGLCEQSRLQDAVSYLQDVEGKDTGLSIVSFNTIMSRFCTLGFVDVAKSFFC 300

Query: 301 LMVKNGL 306
           +M+K G+
Sbjct: 301 VMLKYGI 307

[Close]
BLAST of Carg01777 vs. TrEMBL
Match: tr|A0A2I4DXX1|A0A2I4DXX1_9ROSI (putative pentatricopeptide repeat-containing protein At1g13630 isoform X2 OS=Juglans regia OX=51240 GN=LOC108984477 PE=4 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 4.8e-93
Identity = 176/307 (57.33%), Postives = 226/307 (73.62%), Query Frame = 0 

Query: 1   MLSRIHQWK-PLHSLRKCGILASFSSVILARPSVSAARLEAESVTPSFVLGQNDPVCEIL 60
           ML  + QWK  LH   +   L   SS++  +PSVSAA+LE E  + S +   +D V EIL
Sbjct: 1   MLHHLRQWKNSLHFPARFRTLLPLSSILFTKPSVSAAKLEDEPASSSAIPNTSDTVGEIL 60

Query: 61  TGLNSFGFRAYVGGCNFRTVVSTLSETVVDGVLESLNIQNPDVAVAFFYLLRNKYGFRHS 120
            GL SFG R +  G  FRTVV TL+ T VD +++ L +++PD AV FF+LL+++Y FRHS
Sbjct: 61  AGLRSFGLRRFFRGDYFRTVVLTLNWTQVDQIIDVLRVESPDFAVDFFHLLKDRYQFRHS 120

Query: 121 GFSQLAVSHILAGKGRFKELHCVIKQLVEEQGSGSASSFCDLLLNKFRNWDSNGVVWDML 180
             S+  VSH+LA K RFKE+  +IKQ+VEE+GSGSA S C+LLLN FR WDSN V+WDML
Sbjct: 121 RASRFIVSHVLAEKTRFKEMQLIIKQMVEEEGSGSAPSLCELLLNSFRGWDSNTVIWDML 180

Query: 181 AFAYSRHEMIHDALFVVAKMKDLNLQASVPTYNSLLHNLRHTDVMWDICNEIKASGAPQS 240
           AF YSR EM+ DALFV+AKMKDLN+ AS+ TYNSLLHNLR T+ MWD+  +IK SG  Q+
Sbjct: 181 AFGYSRFEMVQDALFVLAKMKDLNMHASIQTYNSLLHNLRRTETMWDMHTDIKVSGTFQN 240

Query: 241 EYTTSILIHGLCAQSKLQDAISFLQD-SNEVVGPSIVSINTVMSKFCKVGLVDVARSFFC 300
           EYT SI++ GLC QS+LQDA+S+LQD   +  G SIVS NT+MS+FC +G VDVA+SFFC
Sbjct: 241 EYTHSIIVDGLCEQSRLQDAVSYLQDVEGKDTGLSIVSFNTIMSRFCTLGFVDVAKSFFC 300

Query: 301 LMVKNGL 306
           +M+K G+
Sbjct: 301 VMLKYGI 307

The following BLAST results are available for this feature:
BLAST of Carg01777 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022956868.14.6e-172100.00putative pentatricopeptide repeat-containing protein At1g13630 isoform X1 [Cucur... [more]
XP_023536817.13.7e-16998.37putative pentatricopeptide repeat-containing protein At1g13630 [Cucurbita pepo s... [more]
XP_022977564.12.7e-16496.41putative pentatricopeptide repeat-containing protein At1g13630 [Cucurbita maxima... [more]
XP_022149078.13.3e-13880.39putative pentatricopeptide repeat-containing protein At1g13630 isoform X1 [Momor... [more]
XP_008465042.14.4e-13882.79PREDICTED: putative pentatricopeptide repeat-containing protein At1g13630 [Cucum... [more]
BLAST of Carg01777 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G13630.11.0e-4844.55Tetratricopeptide repeat (TPR)-like superfamily protein[more]
BLAST of Carg01777 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LMY5|PPR41_ARATH5.4e-5542.12Putative pentatricopeptide repeat-containing protein At1g13630 OS=Arabidopsis th... [more]
BLAST of Carg01777 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CNC6|A0A1S3CNC6_CUCME2.9e-13882.79putative pentatricopeptide repeat-containing protein At1g13630 OS=Cucumis melo O... [more]
tr|A0A0A0L9A2|A0A0A0L9A2_CUCSA6.2e-13380.84Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G642640 PE=4 SV=1[more]
tr|A0A2P5DTW7|A0A2P5DTW7_9ROSA2.1e-9660.26Tetratricopeptide-like helical domain containing protein OS=Trema orientalis OX=... [more]
tr|A0A2I4DXY8|A0A2I4DXY8_9ROSI4.8e-9357.33putative pentatricopeptide repeat-containing protein At1g13630 isoform X1 OS=Jug... [more]
tr|A0A2I4DXX1|A0A2I4DXX1_9ROSI4.8e-9357.33putative pentatricopeptide repeat-containing protein At1g13630 isoform X2 OS=Jug... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg01777-RACarg01777-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 767..799
e-value: 4.4E-7
score: 27.7
coord: 310..344
e-value: 1.2E-9
score: 35.8
coord: 625..658
e-value: 6.4E-8
score: 30.3
coord: 415..448
e-value: 9.1E-9
score: 33.0
coord: 730..763
e-value: 1.7E-5
score: 22.7
coord: 450..482
e-value: 1.3E-6
score: 26.2
coord: 590..623
e-value: 3.5E-9
score: 34.3
coord: 380..413
e-value: 2.8E-7
score: 28.3
coord: 345..379
e-value: 8.8E-5
score: 20.4
coord: 521..553
e-value: 9.2E-10
score: 36.1
coord: 275..309
e-value: 7.3E-7
score: 27.0
coord: 660..693
e-value: 2.8E-9
score: 34.6
coord: 695..727
e-value: 1.4E-6
score: 26.1
coord: 555..588
e-value: 2.4E-7
score: 28.5
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 345..391
e-value: 5.9E-11
score: 42.3
coord: 272..320
e-value: 3.2E-14
score: 52.7
coord: 587..636
e-value: 1.9E-17
score: 63.0
coord: 518..566
e-value: 3.4E-15
score: 55.8
coord: 657..705
e-value: 3.3E-17
score: 62.3
coord: 413..461
e-value: 1.6E-13
score: 50.5
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 730..758
e-value: 2.3E-4
score: 21.1
coord: 767..795
e-value: 0.0011
score: 19.0
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 483..517
score: 5.908
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 518..552
score: 13.548
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 239..269
score: 6.127
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 553..587
score: 12.167
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 798..832
score: 6.785
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 448..482
score: 11.29
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 378..412
score: 11.4
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 728..762
score: 9.317
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 658..692
score: 12.419
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 273..307
score: 10.326
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 693..727
score: 10.194
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 343..377
score: 10.665
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 172..206
score: 7.574
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 308..342
score: 13.592
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 763..797
score: 10.622
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 623..657
score: 12.079
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 413..447
score: 12.463
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 588..622
score: 12.474
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 482..604
e-value: 3.9E-32
score: 113.1
coord: 87..219
e-value: 6.4E-9
score: 37.4
coord: 728..838
e-value: 1.5E-19
score: 72.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 605..727
e-value: 9.8E-38
score: 132.4
coord: 220..334
e-value: 6.2E-23
score: 83.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 335..404
e-value: 2.6E-20
score: 74.7
coord: 405..481
e-value: 1.6E-20
score: 75.4
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILYSSF48452TPR-likecoord: 324..511
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 7..738
NoneNo IPR availablePANTHERPTHR24015:SF1038SUBFAMILY NOT NAMEDcoord: 7..738
NoneNo IPR availableSUPERFAMILYSSF81901HCP-likecoord: 494..686

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg01777Cla020323Watermelon (97103) v1carwmB0842
Carg01777ClCG05G023480Watermelon (Charleston Gray)carwcgB0816
Carg01777CmaCh04G015720Cucurbita maxima (Rimu)carcmaB1170
Carg01777CmoCh04G016440Cucurbita moschata (Rifu)carcmoB1138
Carg01777Lsi04G003410Bottle gourd (USVL1VR-Ls)carlsiB767
Carg01777Cla97C05G105490Watermelon (97103) v2carwmbB0878
Carg01777Bhi07G001198Wax gourdcarwgoB0983
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg01777Silver-seed gourdcarcarB538
Carg01777Silver-seed gourdcarcarB461
Carg01777Cucumber (Gy14) v2carcgybB0831
Carg01777Cucumber (Gy14) v1carcgyB0968
Carg01777Cucurbita maxima (Rimu)carcmaB1160
Carg01777Cucurbita maxima (Rimu)carcmaB1167
Carg01777Cucurbita moschata (Rifu)carcmoB1135
Carg01777Cucurbita pepo (Zucchini)carcpeB1169
Carg01777Cucurbita pepo (Zucchini)carcpeB1177
Carg01777Wild cucumber (PI 183967)carcpiB0877
Carg01777Cucumber (Chinese Long) v2carcuB0857
Carg01777Cucumber (Chinese Long) v3carcucB0881
Carg01777Bottle gourd (USVL1VR-Ls)carlsiB768
Carg01777Melon (DHL92) v3.5.1carmeB0834
Carg01777Melon (DHL92) v3.5.1carmeB0835
Carg01777Melon (DHL92) v3.6.1carmedB0846
Carg01777Melon (DHL92) v3.6.1carmedB0847
Carg01777Watermelon (Charleston Gray)carwcgB0817
Carg01777Watermelon (97103) v1carwmB0846
Carg01777Watermelon (97103) v2carwmbB0880
Carg01777Watermelon (97103) v2carwmbB0875
Carg01777Wax gourdcarwgoB0986