Carg01764 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg01764
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	D-ribose-binding periplasmic
Location	Cucurbita_argyrosperma_scaffold_003 : 321984 .. 322897 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATGGACGGCCTGCAATTCTAAGTAGACCCATTTGGCGAGCAAAGAAGCTGTATAGAAAGGGACTTCTTTTCCTCCTATTTATCATCATCTTCTTCTTCCTTTTCCTCCTCTTCCTCGGTCTTCTTTCAATCTACCATCACAAAGTTCGGATGGGGAATTGCCAGGCGGTTGATGCGGCGGCTCTGGTTATACAGCACCCAAGTGGCCGGATTGAGAGGCTGTATTGGCCGGTGGTGGCTAGTGAGGTCATGAGAACGAATCCGGGTCACTATGTTTCTCTTATAATTCCCTTACCTCAATCTGAGGATGACAATCCGGAGCCCAAAACGGTGCGTTTTACTCGTGTTAAGCTTCTCCGGCCAAACGACACTCTTGCTCTTGGCCATGCCTATCGGCTCGTCACCACTCAGGGTATGATACAGCTTTTCTGTTCCTTCTCTGTTTAGTAGTAAGTTTAGCCCTTACCGACGTTTTGTTTGGAACCTCCAGAGGTTATGAAGGTGTTGCGGGCTAAAAAGTATGCAAAATCCAAGAAGCCATTGATGGAGTCGGAGGAGAAGCGGGCTGCCGGCGGTGAAGTAGAAGAGACGGAAAAGAACCAGCAGGTAAACTCGATTGTTTCCTTTGGAATCAGAATCGATCACTGCAACAGAAAAGTGAAAAAGTCAAACATGATTGTGATTGGGAATCATTTTCCGAGATAAAATCATACCAATAATCTCTCTGAAAAAACAAAAAACATTGCAGGCGGTCAAACATGAAAGACATCGAATTCGAACACCAGCAGCAAATGCCACTGCGGCGAGGTCAAAGGCTTGGAGACCATCATTGCAGAGCATCTCTGAAGCTGCCGCCTGATTTATGTGTCATACTTTTTTTCATCATAACAAGCACAAGCGTGGTTCATACG

mRNA sequence

ATGAATGGACGGCCTGCAATTCTAAGTAGACCCATTTGGCGAGCAAAGAAGCTGTATAGAAAGGGACTTCTTTTCCTCCTATTTATCATCATCTTCTTCTTCCTTTTCCTCCTCTTCCTCGGTCTTCTTTCAATCTACCATCACAAAGTTCGGATGGGGAATTGCCAGGCGGTTGATGCGGCGGCTCTGGTTATACAGCACCCAAGTGGCCGGATTGAGAGGCTGTATTGGCCGGTGGTGGCTAGTGAGGTCATGAGAACGAATCCGGGTCACTATGTTTCTCTTATAATTCCCTTACCTCAATCTGAGGATGACAATCCGGAGCCCAAAACGGTGCGTTTTACTCGTGTTAAGCTTCTCCGGCCAAACGACACTCTTGCTCTTGGCCATGCCTATCGGCTCGTCACCACTCAGGAGGTTATGAAGGTGTTGCGGGCTAAAAAGTATGCAAAATCCAAGAAGCCATTGATGGAGTCGGAGGAGAAGCGGGCTGCCGGCGGTGAAGTAGAAGAGACGGAAAAGAACCAGCAGGCGGTCAAACATGAAAGACATCGAATTCGAACACCAGCAGCAAATGCCACTGCGGCGAGGTCAAAGGCTTGGAGACCATCATTGCAGAGCATCTCTGAAGCTGCCGCCTGATTTATGTGTCATACTTTTTTTCATCATAACAAGCACAAGCGTGGTTCATACG

Coding sequence (CDS)

ATGAATGGACGGCCTGCAATTCTAAGTAGACCCATTTGGCGAGCAAAGAAGCTGTATAGAAAGGGACTTCTTTTCCTCCTATTTATCATCATCTTCTTCTTCCTTTTCCTCCTCTTCCTCGGTCTTCTTTCAATCTACCATCACAAAGTTCGGATGGGGAATTGCCAGGCGGTTGATGCGGCGGCTCTGGTTATACAGCACCCAAGTGGCCGGATTGAGAGGCTGTATTGGCCGGTGGTGGCTAGTGAGGTCATGAGAACGAATCCGGGTCACTATGTTTCTCTTATAATTCCCTTACCTCAATCTGAGGATGACAATCCGGAGCCCAAAACGGTGCGTTTTACTCGTGTTAAGCTTCTCCGGCCAAACGACACTCTTGCTCTTGGCCATGCCTATCGGCTCGTCACCACTCAGGAGGTTATGAAGGTGTTGCGGGCTAAAAAGTATGCAAAATCCAAGAAGCCATTGATGGAGTCGGAGGAGAAGCGGGCTGCCGGCGGTGAAGTAGAAGAGACGGAAAAGAACCAGCAGGCGGTCAAACATGAAAGACATCGAATTCGAACACCAGCAGCAAATGCCACTGCGGCGAGGTCAAAGGCTTGGAGACCATCATTGCAGAGCATCTCTGAAGCTGCCGCCTGA

Protein sequence

MNGRPAILSRPIWRAKKLYRKGLLFLLFIIIFFFLFLLFLGLLSIYHHKVRMGNCQAVDAAALVIQHPSGRIERLYWPVVASEVMRTNPGHYVSLIIPLPQSEDDNPEPKTVRFTRVKLLRPNDTLALGHAYRLVTTQEVMKVLRAKKYAKSKKPLMESEEKRAAGGEVEETEKNQQAVKHERHRIRTPAANATAARSKAWRPSLQSISEAAA

Homology

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BLAST of Carg01764 vs. NCBI nr
Match: XP_022956732.1 (uncharacterized protein LOC111458357 [Cucurbita moschata])

HSP 1 Score: 372.9 bits (956), Expect = 7.5e-100
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0


Query: 1   MNGRPAILSRPIWRAKKLYRKGLLFXXXXXXXXXXXXXXXXXXSIYHHKVRMGNCQAVDA 60
           MNGRPAILSRPIWRAKKLYRKGLLFXXXXXXXXXXXXXXXXXXSIYHHKVRMGNCQAVDA
Sbjct: 1   MNGRPAILSRPIWRAKKLYRKGLLFXXXXXXXXXXXXXXXXXXSIYHHKVRMGNCQAVDA 60

Query: 61  AALVIQHPSGRIERLYWPVVASEVMRTNPGHYVSLIIPLPQSEDDNPEPKTVRFTRVKLL 120
           AALVIQHPSGRIERLYWPVVASEVMRTNPGHYVSLIIPLPQSEDDNPEPKTVRFTRVKLL
Sbjct: 61  AALVIQHPSGRIERLYWPVVASEVMRTNPGHYVSLIIPLPQSEDDNPEPKTVRFTRVKLL 120

Query: 121 RPNDTLALGHAYRLVTTQEVMKVLRAKKYAKSKKPLMESEEKRAAGGEVEETEKNQQAVK 180
           RPNDTLALGHAYRLVTTQEVMKVLRAKKYAKSKKPLMESEEKRAAGGEVEETEKNQQAVK
Sbjct: 121 RPNDTLALGHAYRLVTTQEVMKVLRAKKYAKSKKPLMESEEKRAAGGEVEETEKNQQAVK 180

Query: 181 HERHRIRTPAANATAARSKAWRPSLQSISEAAA 214
           HERHRIRTPAANATAARSKAWRPSLQSISEAAA
Sbjct: 181 HERHRIRTPAANATAARSKAWRPSLQSISEAAA 213

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BLAST of Carg01764 vs. NCBI nr
Match: XP_023513764.1 (uncharacterized protein LOC111778266 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 308.9 bits (790), Expect = 1.3e-80
Identity = 160/162 (98.77%), Postives = 161/162 (99.38%), Query Frame = 0


Query: 52  MGNCQAVDAAALVIQHPSGRIERLYWPVVASEVMRTNPGHYVSLIIPLPQSEDDNPEPKT 111
           MGNCQAVDAAALVIQHP+GRIERLYWPVVASEVMRTNPGHYVSLIIPLPQSEDDNPEPKT
Sbjct: 1   MGNCQAVDAAALVIQHPTGRIERLYWPVVASEVMRTNPGHYVSLIIPLPQSEDDNPEPKT 60

Query: 112 VRFTRVKLLRPNDTLALGHAYRLVTTQEVMKVLRAKKYAKSKKPLMESEEKRAAGGEVEE 171
           VRFTRVKLLRPNDTLALGHAYRLVTTQEVMKVLRAKKYAKSKKPLMESEEKR AGGEVEE
Sbjct: 61  VRFTRVKLLRPNDTLALGHAYRLVTTQEVMKVLRAKKYAKSKKPLMESEEKRTAGGEVEE 120

Query: 172 TEKNQQAVKHERHRIRTPAANATAARSKAWRPSLQSISEAAA 214
           TEKNQQAVKHERHRIRTPAANATAARSKAWRPSLQSISEAAA
Sbjct: 121 TEKNQQAVKHERHRIRTPAANATAARSKAWRPSLQSISEAAA 162

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BLAST of Carg01764 vs. NCBI nr
Match: XP_022988630.1 (uncharacterized protein LOC111485821 [Cucurbita maxima])

HSP 1 Score: 305.1 bits (780), Expect = 1.9e-79
Identity = 159/162 (98.15%), Postives = 159/162 (98.15%), Query Frame = 0


Query: 52  MGNCQAVDAAALVIQHPSGRIERLYWPVVASEVMRTNPGHYVSLIIPLPQSEDDNPEPKT 111
           MGNCQAVDAAALVIQHPSGRIERLYWPVVASEVMRTNPGHYVSLIIPLPQSEDDNPEPKT
Sbjct: 1   MGNCQAVDAAALVIQHPSGRIERLYWPVVASEVMRTNPGHYVSLIIPLPQSEDDNPEPKT 60

Query: 112 VRFTRVKLLRPNDTLALGHAYRLVTTQEVMKVLRAKKYAKSKKPLMESEEKRAAGGEVEE 171
           VRFTRVKLLRPNDTLALGHAYRLVTTQEVMKVLRAKKYAKSKK LMESEE R AGGEVEE
Sbjct: 61  VRFTRVKLLRPNDTLALGHAYRLVTTQEVMKVLRAKKYAKSKKQLMESEENRTAGGEVEE 120

Query: 172 TEKNQQAVKHERHRIRTPAANATAARSKAWRPSLQSISEAAA 214
           TEKNQQAVKHERHRIRTPAANATAARSKAWRPSLQSISEAAA
Sbjct: 121 TEKNQQAVKHERHRIRTPAANATAARSKAWRPSLQSISEAAA 162

[Close]

BLAST of Carg01764 vs. NCBI nr
Match: XP_022151035.1 (uncharacterized protein LOC111019055 [Momordica charantia])

HSP 1 Score: 292.4 bits (747), Expect = 1.3e-75
Identity = 165/225 (73.33%), Postives = 176/225 (78.22%), Query Frame = 0


Query: 1   MNGRPAILSRPIWRAKK--------LYRKGLLFXXXXXXXXXXXXXXXXXXSIYHHKVRM 60
           MNGRPA+ SRPIW+ K         LY   L++                  SIY  +++M
Sbjct: 1   MNGRPALPSRPIWQTKSSCIERDLFLYPSSLIY-----------LLLLLPLSIY--QIQM 60

Query: 61  GNCQAVDAAALVIQHPSGRIERLYWPVVASEVMRTNPGHYVSLIIPLPQSEDDN-PEPKT 120
           GNCQAVDAAALVIQHPSGRIERLYWPV+ASEVMRTNPGHYVSLIIPLPQSE DN  EPKT
Sbjct: 61  GNCQAVDAAALVIQHPSGRIERLYWPVMASEVMRTNPGHYVSLIIPLPQSEQDNREEPKT 120

Query: 121 VRFTRVKLLRPNDTLALGHAYRLVTTQEVMKVLRAKKYAKSKKPLMESEEK---RAAGGE 180
           VRFTRVKLLRPNDTLALGHAYRLVTTQEVMKVLRAK++AKSKKPL ESEEK     AGGE
Sbjct: 121 VRFTRVKLLRPNDTLALGHAYRLVTTQEVMKVLRAKRHAKSKKPLPESEEKPEMPTAGGE 180

Query: 181 VEETEKNQQAVKHERHRIRTPAANATAARSKAWRPSLQSISEAAA 214
            EETEKN QAVKHERHRIRTPA NAT  RSK WRPSLQSISEAA+
Sbjct: 181 AEETEKNHQAVKHERHRIRTPATNATVGRSKTWRPSLQSISEAAS 212

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BLAST of Carg01764 vs. NCBI nr
Match: XP_004135475.2 (PREDICTED: uncharacterized protein LOC101209663 [Cucumis sativus] >KGN51832.1 hypothetical protein Csa_5G603290 [Cucumis sativus])

HSP 1 Score: 283.9 bits (725), Expect = 4.6e-73
Identity = 151/169 (89.35%), Postives = 155/169 (91.72%), Query Frame = 0


Query: 52  MGNCQAVDAAALVIQHPSGRIERLYWPVVASEVMRTNPGHYVSLIIPLPQSEDDNPEPKT 111
           MGNCQAVDAAALVIQHPSGRIERLYWPVVASEVMRTNPGHYVSLIIPLPQSEDDN EPKT
Sbjct: 1   MGNCQAVDAAALVIQHPSGRIERLYWPVVASEVMRTNPGHYVSLIIPLPQSEDDNREPKT 60

Query: 112 VRFTRVKLLRPNDTLALGHAYRLVTTQEVMKVLRAKKYAKSKKPLMESEEK-------RA 171
           VRFTRVKLLRPNDTLALGHAYRLVTTQEVMKVLRAKKYAKSKKPL ESEEK       R+
Sbjct: 61  VRFTRVKLLRPNDTLALGHAYRLVTTQEVMKVLRAKKYAKSKKPLPESEEKPQTVMEERS 120

Query: 172 AGGEVEETEKNQQAVKHERHRIRTPAANATAARSKAWRPSLQSISEAAA 214
           AG E E+TEKNQQAVKHERHRIR P AN TAARS+AWRPSLQSISEAA+
Sbjct: 121 AGDEEEDTEKNQQAVKHERHRIRAPVANTTAARSRAWRPSLQSISEAAS 169

[Close]

BLAST of Carg01764 vs. TAIR10
Match: AT1G60010.1 (unknown protein)

HSP 1 Score: 158.7 bits (400), Expect = 4.0e-39
Identity = 94/173 (54.34%), Postives = 109/173 (63.01%), Query Frame = 0


Query: 52  MGNCQAVDAAALVIQHPSGRIERLYWPVVASEVMRTNPGHYVSLIIPLPQ--------SE 111
           MGNCQAVDAAALV+QHP G+I+R Y PV  SE+MR  PGHYVSLIIPLP+        + 
Sbjct: 1   MGNCQAVDAAALVLQHPDGKIDRYYGPVSVSEIMRMYPGHYVSLIIPLPEKNIPATTTTT 60

Query: 112 DDNPEPKTVRFTRVKLLRPNDTLALGHAYRLVTTQEVMKVLRAKKYAKSKK---PLMESE 171
           DD  E K VRFTRVKLLRP + L LGHAYRL+T+QEVMKVLRAKKYAK+KK         
Sbjct: 61  DDKSERKVVRFTRVKLLRPTENLVLGHAYRLITSQEVMKVLRAKKYAKTKKHQXXXXXXX 120

Query: 172 EKRAAGGEVEETEKNQQAVKHERHRIRTPAANATAARSKAWRPSLQSISEAAA 214
                                     R+   N+ ++RSK WRPSLQSISEA +
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXRSVLTNSASSRSKTWRPSLQSISEATS 173

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BLAST of Carg01764 vs. TAIR10
Match: AT1G10530.1 (unknown protein)

HSP 1 Score: 144.8 bits (364), Expect = 6.0e-35
Identity = 89/174 (51.15%), Postives = 112/174 (64.37%), Query Frame = 0


Query: 52  MGNCQAVDAAALVIQHPSGRIERLYWPVVASEVMRTNPGHYVSLIIPLPQSE-------- 111
           MGNCQAV+AA LV+QHP G I+R Y  V  +EVM   PGHYVSLIIPL + E        
Sbjct: 1   MGNCQAVNAAVLVLQHPGGIIDRYYSSVSVTEVMAMYPGHYVSLIIPLSEEEEKNIPATE 60

Query: 112 --DDNPEPKTVRFTRVKLLRPNDTLALGHAYRLVTTQEVMKVLRAKKYAKSKKPLME--S 171
             DD  + K VRFTRV+LLRP + L LGHAYRL+T+QEVMKVLR KK AK+KK  +E  +
Sbjct: 61  KGDDKKQRKAVRFTRVQLLRPTENLVLGHAYRLITSQEVMKVLREKKSAKTKKHQIEKTT 120

Query: 172 EEKRAAGGEVEETEKNQQAVKHERHRIRTPAANATAARSKAWRPSLQSISEAAA 214
             K+ +  +V E ++ +Q         R    + +  +SK WRPSLQSISEA +
Sbjct: 121 TAKKFSDKKVPEKKQGKQ--------FRVIRNSTSLLKSKTWRPSLQSISEATS 166

[Close]

BLAST of Carg01764 vs. TAIR10
Match: AT5G50090.1 (unknown protein)

HSP 1 Score: 127.1 bits (318), Expect = 1.3e-29
Identity = 81/167 (48.50%), Postives = 102/167 (61.08%), Query Frame = 0


Query: 52  MGNCQAVDAAALVIQHPSGRIERLYWPVVASEVMRTNPGHYVSLIIPLPQ-SEDDNPEPK 111
           MGNCQAVD A +VIQHP+G+ E+L  PV AS VM+ NPGH VSL+I     S   +    
Sbjct: 1   MGNCQAVDTARVVIQHPNGKEEKLSCPVSASYVMKMNPGHCVSLLISTTALSSASSGHGG 60

Query: 112 TVRFTRVKLLRPNDTLALGHAYRLVTTQEVMKVLRAKKYAKSKKPLMESEEK----RAAG 171
            +R TR+KLLRP DTL LGH YRL+TT+EVMK L AKK +K KK    S++K    +A  
Sbjct: 61  PLRLTRIKLLRPTDTLVLGHVYRLITTKEVMKGLMAKKCSKLKKESKGSDDKLEMVKAIN 120

Query: 172 GEVEETEKNQQAVKHERHRIRTPAANATAARSKAWRPSLQSISEAAA 214
               + E   Q  K E+ R R          S++W+PSLQSISE  +
Sbjct: 121 STKLDNEDQLQMKKQEKERSRI---------SRSWQPSLQSISEGGS 158

[Close]

BLAST of Carg01764 vs. TAIR10
Match: AT5G62900.1 (unknown protein)

HSP 1 Score: 113.2 bits (282), Expect = 1.9e-25
Identity = 72/167 (43.11%), Postives = 101/167 (60.48%), Query Frame = 0


Query: 52  MGNCQAVDAAALVIQHPSGRIERLYWPVVASEVMRTNPGHYVSLIIPLPQSEDDNPEPKT 111
           MGNCQA +AA  VIQ P G+  R Y  V ASEV++++PGH+V+L++         P   +
Sbjct: 1   MGNCQAAEAATTVIQQPDGKSVRFYCTVNASEVIKSHPGHHVALLL-----SSAVPHGGS 60

Query: 112 VRFTRVKLLRPNDTLALGHAYRLVTTQEVMKVLRAKKYAKSKK-----PLMESEEKRAAG 171
           +R TR+KLLRP+D L LGH YRL++++EVMK +RAKK  K KK      + E E      
Sbjct: 61  LRVTRIKLLRPSDNLLLGHVYRLISSEEVMKGIRAKKSGKMKKIHGEFSVAEEEINPLTL 120

Query: 172 GEVEETEKNQQAVKHERHRIRTPAANATAARSKAWRPSLQSISEAAA 214
                ++K+ Q   HE+ R       AT  + +AW+PSLQSISE+ +
Sbjct: 121 RSESASDKDTQRRIHEKQRGMMNTGGAT-NKVRAWQPSLQSISESTS 161

[Close]

BLAST of Carg01764 vs. TAIR10
Match: AT5G67620.1 (unknown protein)

HSP 1 Score: 102.8 bits (255), Expect = 2.6e-22
Identity = 55/136 (40.44%), Postives = 87/136 (63.97%), Query Frame = 0


Query: 52  MGNCQAVDAAALVIQHPS-GRIERLYWPVVASEVMRTNPGHYVSLIIPLPQSEDDNPEPK 111
           MGNCQA +AA ++I HP+  ++ER+YW V AS++M++NPGHYV++++  P  +++    K
Sbjct: 1   MGNCQAAEAATVLIHHPAENKVERIYWSVTASDIMKSNPGHYVAVVVTSPTMKNE----K 60

Query: 112 TVRFTRVKLLRPNDTLALGHAYRLVTTQEVMKVLRAKKYAKSKKPLMESEEKRAAGGEVE 171
            +   ++KLLRP+DTL +GH YRLV+ +EV+     KK  K  K L E       GG ++
Sbjct: 61  GLPLKQLKLLRPDDTLLIGHVYRLVSFEEVLNEFATKKCVKLGKLLKE-------GGGLD 120

Query: 172 ETEKNQQAVKHERHRI 187
            T+K     KH + ++
Sbjct: 121 LTKKK---TKHRKKKL 122

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BLAST of Carg01764 vs. TrEMBL
Match: tr|A0A0A0KTS2|A0A0A0KTS2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G603290 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 3.0e-73
Identity = 151/169 (89.35%), Postives = 155/169 (91.72%), Query Frame = 0


Query: 52  MGNCQAVDAAALVIQHPSGRIERLYWPVVASEVMRTNPGHYVSLIIPLPQSEDDNPEPKT 111
           MGNCQAVDAAALVIQHPSGRIERLYWPVVASEVMRTNPGHYVSLIIPLPQSEDDN EPKT
Sbjct: 1   MGNCQAVDAAALVIQHPSGRIERLYWPVVASEVMRTNPGHYVSLIIPLPQSEDDNREPKT 60

Query: 112 VRFTRVKLLRPNDTLALGHAYRLVTTQEVMKVLRAKKYAKSKKPLMESEEK-------RA 171
           VRFTRVKLLRPNDTLALGHAYRLVTTQEVMKVLRAKKYAKSKKPL ESEEK       R+
Sbjct: 61  VRFTRVKLLRPNDTLALGHAYRLVTTQEVMKVLRAKKYAKSKKPLPESEEKPQTVMEERS 120

Query: 172 AGGEVEETEKNQQAVKHERHRIRTPAANATAARSKAWRPSLQSISEAAA 214
           AG E E+TEKNQQAVKHERHRIR P AN TAARS+AWRPSLQSISEAA+
Sbjct: 121 AGDEEEDTEKNQQAVKHERHRIRAPVANTTAARSRAWRPSLQSISEAAS 169

[Close]

BLAST of Carg01764 vs. TrEMBL
Match: tr|A0A1S3BE39|A0A1S3BE39_CUCME (uncharacterized protein LOC103489035 OS=Cucumis melo OX=3656 GN=LOC103489035 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 6.7e-73
Identity = 150/169 (88.76%), Postives = 154/169 (91.12%), Query Frame = 0


Query: 52  MGNCQAVDAAALVIQHPSGRIERLYWPVVASEVMRTNPGHYVSLIIPLPQSEDDNPEPKT 111
           MGNCQAVDAAALVIQHPSGRIERLYWPVVASEVMRTNPGHYVSLIIPLPQSEDDN EPKT
Sbjct: 1   MGNCQAVDAAALVIQHPSGRIERLYWPVVASEVMRTNPGHYVSLIIPLPQSEDDNSEPKT 60

Query: 112 VRFTRVKLLRPNDTLALGHAYRLVTTQEVMKVLRAKKYAKSKKPLMESE-------EKRA 171
           VRFTRVKLLRPNDTLALGHAYRLVTTQEVMKVLRAKKYAKSKKPL ESE       EKR+
Sbjct: 61  VRFTRVKLLRPNDTLALGHAYRLVTTQEVMKVLRAKKYAKSKKPLPESEEKPQTEMEKRS 120

Query: 172 AGGEVEETEKNQQAVKHERHRIRTPAANATAARSKAWRPSLQSISEAAA 214
           AG E E+TEKNQQ VKHERHRIRTP  N TAARS+AWRPSLQSISEAA+
Sbjct: 121 AGDEEEDTEKNQQVVKHERHRIRTPVLNTTAARSRAWRPSLQSISEAAS 169

[Close]

BLAST of Carg01764 vs. TrEMBL
Match: tr|A0A2I4E1M2|A0A2I4E1M2_9ROSI (uncharacterized protein LOC108985454 OS=Juglans regia OX=51240 GN=LOC108985454 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.3e-55
Identity = 120/173 (69.36%), Postives = 140/173 (80.92%), Query Frame = 0


Query: 52  MGNCQAVDAAALVIQHPSGRIERLYWPVVASEVMRTNPGHYVSLIIPLPQSEDDNPEPKT 111
           MGNCQA+DAAALVIQHPSG+IER+YWPV ASEVM+TNPGHYVSLIIPLP  E++N E KT
Sbjct: 1   MGNCQAIDAAALVIQHPSGKIERMYWPVSASEVMKTNPGHYVSLIIPLPVPEEENKEQKT 60

Query: 112 VRFTRVKLLRPNDTLALGHAYRLVTTQEVMKVLRAKKYAKSKKPLMES--------EEKR 171
           VRFTRVKLLRP DTLALGHAYRLVTTQEVMKVLRAKK+AK+K+   ES        E+++
Sbjct: 61  VRFTRVKLLRPTDTLALGHAYRLVTTQEVMKVLRAKKHAKTKQQQQESAGKSQTVPEKQQ 120

Query: 172 AAGGEVE---ETEKNQQAVKHERHRIRTPAANATAARSKAWRPSLQSISEAAA 214
            +G E E   + EK  Q +KHER R+RTP+ N+   RSK+WRPSLQSISEA +
Sbjct: 121 RSGCEAEGKSDMEKTSQVMKHERQRVRTPSTNSAVMRSKSWRPSLQSISEAGS 173

[Close]

BLAST of Carg01764 vs. TrEMBL
Match: tr|A0A061EDL0|A0A061EDL0_THECC (Serine/threonine-protein kinase TAO3 OS=Theobroma cacao OX=3641 GN=TCM_010230 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 7.0e-54
Identity = 116/172 (67.44%), Postives = 133/172 (77.33%), Query Frame = 0


Query: 52  MGNCQAVDAAALVIQHPSGRIERLYWPVVASEVMRTNPGHYVSLIIPLPQSEDDNPEPKT 111
           MGNCQA+DAAALVIQHP GRIERLYWP+ ASEVMR NPGHYVSLIIPLP+ E++  + KT
Sbjct: 1   MGNCQAIDAAALVIQHPCGRIERLYWPIPASEVMRMNPGHYVSLIIPLPEPEEEKQDEKT 60

Query: 112 VRFTRVKLLRPNDTLALGHAYRLVTTQEVMKVLRAKKYAKSKKPLMESEEKRAAG----- 171
           VRFTRVKLLRP+DTLALGHAYRL+T+QEVMKVL+AKKYAK K+  ++S EK   G     
Sbjct: 61  VRFTRVKLLRPSDTLALGHAYRLITSQEVMKVLKAKKYAKMKRQQLDSNEKLQHGQENQS 120

Query: 172 -----GEVEETEKNQQAVKHERHRIRTPAANATAARSKAWRPSLQSISEAAA 214
                G   + EK  Q +KHER R RT   NA A RSK+WRPSLQSISEA +
Sbjct: 121 SGREPGGKSDAEKTYQVIKHERQRSRTTPVNAAALRSKSWRPSLQSISEAGS 172

[Close]

BLAST of Carg01764 vs. TrEMBL
Match: tr|A0A2N9EBT4|A0A2N9EBT4_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS124 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 3.8e-52
Identity = 123/173 (71.10%), Postives = 134/173 (77.46%), Query Frame = 0


Query: 52  MGNCQAVDAAALVIQHPSGRIERLYWPVVASEVMRTNPGHYVSLIIPLPQSEDDNPEPK- 111
           MGNCQA+DAAALVIQHPSGRIERLYW V ASEVM+ NPGHYVSLIIPLP SE++N E K 
Sbjct: 1   MGNCQAIDAAALVIQHPSGRIERLYWQVSASEVMKMNPGHYVSLIIPLPVSEEENQEQKA 60

Query: 112 TVRFTRVKLLRPNDTLALGHAYRLVTTQEVMKVLRAKKYAKSKKPLMESEEKR------- 171
           TVRFTRVKLLRPNDTL LGHAYRLVTTQEV+KVLRAKK AK KK   ES EK        
Sbjct: 61  TVRFTRVKLLRPNDTLTLGHAYRLVTTQEVVKVLRAKKNAKMKKQQPESAEKSQTVPEKP 120

Query: 172 AAGGEVE---ETEKNQQAVKHERHRIRTPAANATAARSKAWRPSLQSISEAAA 214
           ++G E E   + EK  QA+ HERHR RT   N  A RSK+WRPSLQSISEA +
Sbjct: 121 SSGCEEEGNSDKEKTYQAMGHERHRTRTTPMNPAAMRSKSWRPSLQSISEATS 173

The following BLAST results are available for this feature:

BLAST of Carg01764 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022956732.1	7.5e-100	100.00	uncharacterized protein LOC111458357 [Cucurbita moschata]	[more]
XP_023513764.1	1.3e-80	98.77	uncharacterized protein LOC111778266 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022988630.1	1.9e-79	98.15	uncharacterized protein LOC111485821 [Cucurbita maxima]	[more]
XP_022151035.1	1.3e-75	73.33	uncharacterized protein LOC111019055 [Momordica charantia]	[more]
XP_004135475.2	4.6e-73	89.35	PREDICTED: uncharacterized protein LOC101209663 [Cucumis sativus] >KGN51832.1 hy...	[more]

BLAST of Carg01764 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G60010.1	4.0e-39	54.34	unknown protein	[more]
AT1G10530.1	6.0e-35	51.15	unknown protein	[more]
AT5G50090.1	1.3e-29	48.50	unknown protein	[more]
AT5G62900.1	1.9e-25	43.11	unknown protein	[more]
AT5G67620.1	2.6e-22	40.44	unknown protein	[more]

BLAST of Carg01764 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg01764 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KTS2\|A0A0A0KTS2_CUCSA	3.0e-73	89.35	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G603290 PE=4 SV=1	[more]
tr\|A0A1S3BE39\|A0A1S3BE39_CUCME	6.7e-73	88.76	uncharacterized protein LOC103489035 OS=Cucumis melo OX=3656 GN=LOC103489035 PE=...	[more]
tr\|A0A2I4E1M2\|A0A2I4E1M2_9ROSI	1.3e-55	69.36	uncharacterized protein LOC108985454 OS=Juglans regia OX=51240 GN=LOC108985454 P...	[more]
tr\|A0A061EDL0\|A0A061EDL0_THECC	7.0e-54	67.44	Serine/threonine-protein kinase TAO3 OS=Theobroma cacao OX=3641 GN=TCM_010230 PE...	[more]
tr\|A0A2N9EBT4\|A0A2N9EBT4_FAGSY	3.8e-52	71.10	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS124 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR025322	DUF4228_plant

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg01764-RA	Carg01764-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 52..210 e-value: 2.2E-30 score: 106.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 151..188
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 199..213
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 151..213
None	No IPR available	PANTHER	PTHR33413	FAMILY NOT NAMED	coord: 52..212
None	No IPR available	PANTHER	PTHR33413:SF4	SUBFAMILY NOT NAMED	coord: 52..212

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg01764	Cla010112	Watermelon (97103) v1	carwmB0839
Carg01764	Csa5G603290	Cucumber (Chinese Long) v2	carcuB0860
Carg01764	MELO3C012021	Melon (DHL92) v3.5.1	carmeB0831
Carg01764	ClCG05G025080	Watermelon (Charleston Gray)	carwcgB0813
Carg01764	CSPI05G22940	Wild cucumber (PI 183967)	carcpiB0880
Carg01764	Cucsa.285800	Cucumber (Gy14) v1	carcgyB0966
Carg01764	CmaCh04G002970	Cucurbita maxima (Rimu)	carcmaB1172
Carg01764	CmaCh04G015900	Cucurbita maxima (Rimu)	carcmaB1170
Carg01764	CmoCh04G003110	Cucurbita moschata (Rifu)	carcmoB1140
Carg01764	CmoCh04G016620	Cucurbita moschata (Rifu)	carcmoB1138
Carg01764	Lsi04G005170	Bottle gourd (USVL1VR-Ls)	carlsiB764
Carg01764	Cp4.1LG01g13050	Cucurbita pepo (Zucchini)	carcpeB1177
Carg01764	Cp4.1LG01g04140	Cucurbita pepo (Zucchini)	carcpeB1178
Carg01764	CsGy5G022440	Cucumber (Gy14) v2	carcgybB0833
Carg01764	MELO3C012021.2	Melon (DHL92) v3.6.1	carmedB0843
Carg01764	CsaV3_5G031820	Cucumber (Chinese Long) v3	carcucB0884
Carg01764	Cla97C01G013040	Watermelon (97103) v2	carwmbB0871
Carg01764	Cla97C05G107190	Watermelon (97103) v2	carwmbB0875
Carg01764	Cla97C06G126410	Watermelon (97103) v2	carwmbB0879
Carg01764	Bhi07G001370	Wax gourd	carwgoB0986

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg01764	Carg07974	Silver-seed gourd	carcarB405

The following block(s) are covering this gene:

None