Carg01646 (gene) Silver-seed gourd

NameCarg01646
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_004 : 2174043 .. 2174384 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTAGGGCACCGACGACCGCTGCCGGAGCGTTAACGGCCTCCTCCCCTTCACTCACCACCACCGTCATCTTGGCCAACGGATCCTCTTCCTCTCAGCCACCCGAAACCCTAGTGCTCCGTCTCAATCGGAAGAAGAAGAAGGTCTCGTGGAAGGAAGGGACCGTCGACAACGAGTTCATGCAGAAGAAAAGCTCGAAGAAGTGCTGTATATTCCACAAGCAGAAGCCCTTTGACGAGGACGATAGCGATCAAGAGGATGATGAGAATCACCATCACAGGGATGGAAGCCCTTGCTGTTCTAGGGGAAACGGCGGGGATGCTTCCAGTAGAGTCAGTTGA

mRNA sequence

ATGGCTAGGGCACCGACGACCGCTGCCGGAGCGTTAACGGCCTCCTCCCCTTCACTCACCACCACCGTCATCTTGGCCAACGGATCCTCTTCCTCTCAGCCACCCGAAACCCTAGTGCTCCGTCTCAATCGGAAGAAGAAGAAGGTCTCGTGGAAGGAAGGGACCGTCGACAACGAGTTCATGCAGAAGAAAAGCTCGAAGAAGTGCTGTATATTCCACAAGCAGAAGCCCTTTGACGAGGACGATAGCGATCAAGAGGATGATGAGAATCACCATCACAGGGATGGAAGCCCTTGCTGTTCTAGGGGAAACGGCGGGGATGCTTCCAGTAGAGTCAGTTGA

Coding sequence (CDS)

ATGGCTAGGGCACCGACGACCGCTGCCGGAGCGTTAACGGCCTCCTCCCCTTCACTCACCACCACCGTCATCTTGGCCAACGGATCCTCTTCCTCTCAGCCACCCGAAACCCTAGTGCTCCGTCTCAATCGGAAGAAGAAGAAGGTCTCGTGGAAGGAAGGGACCGTCGACAACGAGTTCATGCAGAAGAAAAGCTCGAAGAAGTGCTGTATATTCCACAAGCAGAAGCCCTTTGACGAGGACGATAGCGATCAAGAGGATGATGAGAATCACCATCACAGGGATGGAAGCCCTTGCTGTTCTAGGGGAAACGGCGGGGATGCTTCCAGTAGAGTCAGTTGA

Protein sequence

MARAPTTAAGALTASSPSLTTTVILANGSSSSQPPETLVLRLNRKKKKVSWKEGTVDNEFMQKKSSKKCCIFHKQKPFDEDDSDQEDDENHHHRDGSPCCSRGNGGDASSRVS
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004865protein serine/threonine phosphatase inhibitor activity
Vocabulary: Biological Process
TermDefinition
GO:0032515negative regulation of phosphoprotein phosphatase activity
Vocabulary: INTERPRO
TermDefinition
IPR011107PPI_Ypi1
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032515 negative regulation of phosphoprotein phosphatase activity
cellular_component GO:0005575 cellular_component
molecular_function GO:0004865 protein serine/threonine phosphatase inhibitor activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg01646-RACarg01646-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011107Type 1 protein phosphatase inhibitorPFAMPF07491PPI_Ypi1coord: 43..88
e-value: 1.7E-19
score: 69.3
IPR011107Type 1 protein phosphatase inhibitorPANTHERPTHR20835FAMILY NOT NAMEDcoord: 16..102
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..113
NoneNo IPR availablePANTHERPTHR20835:SF0PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 11coord: 16..102