Carg01636 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg01636
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300
Location	Cucurbita_argyrosperma_scaffold_004 : 2136753 .. 2137802 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACCTCCGTAGCCGTTTATTTTGTTGCATTTCTTTGCTTCTTGCATTTCTAGCTTCTATGTCGGTAGCCGCCATATCTCTAGGTTCATCTTTGAAAGCTTCTGATCCCGACCAGGCGTGGAACTCGCCTGGAGCCATTTTCTCTCTTCGTTTCCTTCCATCGGGTTTATCCAGTTCATCTTCTTCTTGTATCGCTGGCATTGTGTACTTTGGTAAAGTTTTTGTCATCTGGTCCGCTGGCGGCGGTGCTCCGGTGGATGCTTCAGGTGCTCTTCACTTTCAATTCGACGGCAACCTTGCCTCATCAATGGCTCCGGTGCCGTCGTTTGGGAATCTAACACCGCTGGCCGTGGCGTCTCCTCCGCTGTACTCGAGGACTCCGGCAATCTTGTACTTCTAAATAGTAGATTCATTCCCCTTAGGCCTTCCTTCGACAATCCCACTGACACGGTTGTTCCATTGCAGAATTTCACAGTGAATATAGTCTTGCAATCTGGCTAGTATTCTTTCAAACAACTTGATACTGGAAATCTAACTCCTATTTGGAATGGTGATGTAATTTATTGGAATCAAGGCTTGAGTACGCCAATCAGTGGCACTCTGGATTGCCTATTTTACAATTAAGTCTGGCTATTTTTGATACCAGCATATTGTTAGGAATGACTGATCTCCAAGTATGATATTGTTCACTTTCATGACTTTGTTTTAGGTTTTCCCACTGCTAGCAAGATTGCAGGTTGCTTATAGCAACGATTATGCAGATAAGCCTTTCCCAGTCGATAATTTTTGGTTTCTGAGGTTGAAATATGATGGAAGTTTAGGAACTTATAGCGTCCCTATTGGCAGTGAGACTGAAACAGTGGGATGGGACGCTGTTCCAGATTAGTGTCAGATATTTGGGTTTTGTGGAGAACTCAGTATTTGTAGTTATAACGATACCCGTCCACACTGTGGCTGCCCATCTGCTAATTTTGAGGCCATTGATCCAAATAATTTGAAGAATAGGTGTAAGAGGAATACACGTTCAAATACAAAGCCAAAGCCATGA

mRNA sequence

ATGAACCTCCGTAGCCGTTTATTTTGTTGCATTTCTTTGCTTCTTGCATTTCTAGCTTCTATGTCGGTAGCCGCCATATCTCTAGGTTCATCTTTGAAAGCTTCTGATCCCGACCAGGCGTGGAACTCGCCTGGAGCCATTTTCTCTCTTCGTTTCCTTCCATCGGGTTTATCCAGTTCATCTTCTTCTTGTATCGCTGGCATTGTGTACTTTGGTAAAGTTTTTGTCATCTGGTCCGCTGGCGGCGGTGCTCCGGTGGATGCTTCAGGTGCTCTTCACTTTCAATTCGACGGCAACCTTGCCTCATCAATGGCTCCGGTGCCGTCGTTTGGGAATCTAACACCGCTGGCCGTGGCGTCTCCTCCGCTGTACTCGAGGACTCCGGCAATCTTATTCATTCCCCTTAGGCCTTCCTTCGACAATCCCACTGACACGGTTGTTCCATTGCAGAATTTCACAGAACTTATAGCGTCCCTATTGGCAGTGAGACTGAAACAGTGGGATGGGACGCTGTTCCAGATTAGTATATTTGGGTTTTGTGGAGAACTCAGTATTTGTAGTTATAACGATACCCGTCCACACTGTGGCTGCCCATCTGCTAATTTTGAGGCCATTGATCCAAATAATTTGAAGAATAGGTGTAAGAGGAATACACGTTCAAATACAAAGCCAAAGCCATGA

Coding sequence (CDS)

ATGAACCTCCGTAGCCGTTTATTTTGTTGCATTTCTTTGCTTCTTGCATTTCTAGCTTCTATGTCGGTAGCCGCCATATCTCTAGGTTCATCTTTGAAAGCTTCTGATCCCGACCAGGCGTGGAACTCGCCTGGAGCCATTTTCTCTCTTCGTTTCCTTCCATCGGGTTTATCCAGTTCATCTTCTTCTTGTATCGCTGGCATTGTGTACTTTGGTAAAGTTTTTGTCATCTGGTCCGCTGGCGGCGGTGCTCCGGTGGATGCTTCAGGTGCTCTTCACTTTCAATTCGACGGCAACCTTGCCTCATCAATGGCTCCGGTGCCGTCGTTTGGGAATCTAACACCGCTGGCCGTGGCGTCTCCTCCGCTGTACTCGAGGACTCCGGCAATCTTATTCATTCCCCTTAGGCCTTCCTTCGACAATCCCACTGACACGGTTGTTCCATTGCAGAATTTCACAGAACTTATAGCGTCCCTATTGGCAGTGAGACTGAAACAGTGGGATGGGACGCTGTTCCAGATTAGTATATTTGGGTTTTGTGGAGAACTCAGTATTTGTAGTTATAACGATACCCGTCCACACTGTGGCTGCCCATCTGCTAATTTTGAGGCCATTGATCCAAATAATTTGAAGAATAGGTGTAAGAGGAATACACGTTCAAATACAAAGCCAAAGCCATGA

Protein sequence

MNLRSRLFCCISLLLAFLASMSVAAISLGSSLKASDPDQAWNSPGAIFSLRFLPSGLSSSSSSCIAGIVYFGKVFVIWSAGGGAPVDASGALHFQFDGNLASSMAPVPSFGNLTPLAVASPPLYSRTPAILFIPLRPSFDNPTDTVVPLQNFTELIASLLAVRLKQWDGTLFQISIFGFCGELSICSYNDTRPHCGCPSANFEAIDPNNLKNRCKRNTRSNTKPKP

Homology

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BLAST of Carg01636 vs. NCBI nr
Match: XP_023550420.1 (G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 150.6 bits (379), Expect = 6.4e-33
Identity = 124/324 (38.27%), Postives = 145/324 (44.75%), Query Frame = 0


Query: 1   MNLRSRLF-CCISLLLAFLASMSVAAISLGSSLKASDPDQAWNSPGAIFSLRFLPSGLSS 60
           M+LRS LF  CI+L+L F  S+SVAAISLGSSL+AS+P+Q W+S    FSLRF P+   S
Sbjct: 1   MDLRSHLFRYCIALVLCFSVSLSVAAISLGSSLRASNPNQTWDSANGDFSLRFHPA--DS 60

Query: 61  SSSSCIAGIVYFGKVFVIWSAGGGAPVDASGALHFQFDGN--LASSMAPVPSFGNLTPLA 120
           S SS IAGIV+ G V  IWSAGGGA +DASGALHFQ DGN  L      V    N T   
Sbjct: 61  SGSSFIAGIVFTGGVPTIWSAGGGATLDASGALHFQSDGNLRLVDGSGAVVWESNTTGRG 120

Query: 121 VASPPLYSRTPAIL----FIPLRPSFDNPTDTVVPLQNFTELIA---------------- 180
           V+S  L      IL       +  SFD+PTDT+VP QNFT  +                 
Sbjct: 121 VSSAVLEDSGNLILRNSSSQAVWSSFDHPTDTIVPSQNFTVGMVLRSGQYSLNLLNIGNI 180

Query: 181 --------------------------------------SLLAV----------------- 216
                                                  +LAV                 
Sbjct: 181 TLTWNGDGPNGDVVYWNHGLNTSINGSLNSPSLRLDPIGMLAVYDTRIPAGSFVAYSNDY 240

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BLAST of Carg01636 vs. NCBI nr
Match: XP_022133876.1 (LOW QUALITY PROTEIN: G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 [Momordica charantia])

HSP 1 Score: 150.2 bits (378), Expect = 8.4e-33
Identity = 127/323 (39.32%), Postives = 144/323 (44.58%), Query Frame = 0


Query: 1   MNLRSRLFCCI-SLLLAFLASMSVAAISLGSSLKASDPDQAWNSPGAIFSLRFLPSGLSS 60
           MNL  RLF CI  LLLAF  S+  AAISLGSSL+ S+PDQAW+S  A FSLRF+PS +SS
Sbjct: 1   MNLHWRLFLCILPLLLAFPVSVLAAAISLGSSLRVSNPDQAWSSSNATFSLRFIPSSVSS 60

Query: 61  SSSSCIAGIVYFGKVFVIWSAGGGAPVDASGALHFQFDGN--LASSMAPVPSFGNLTPLA 120
           SS S IAGIVY G V   W     A VD+SGALHFQ DGN  L      V    N T   
Sbjct: 61  SSPSFIAGIVYSG-VRRRW----XATVDSSGALHFQSDGNLRLVDGSGAVVWESNTTGRG 120

Query: 121 VASPPLYSRTPAILF----IPLRPSFDNPTDTVVPLQNFT-------------------- 180
           VAS  L      +L      P+  SFD PTDT+VP QNFT                    
Sbjct: 121 VASAVLEESGNLVLLNSRSQPVWSSFDYPTDTIVPPQNFTVGMVLQSGQFSFKLLPFGNI 180

Query: 181 -------------------------------------ELI--------ASLLA------- 217
                                                EL         +S +A       
Sbjct: 181 TLIWNGDGPDVVYWNRGLNTSINGTLNSPSLQLDPIGELAVFDTKIPDSSFVAYSNDYGD 240

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BLAST of Carg01636 vs. NCBI nr
Match: XP_022992644.1 (G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 [Cucurbita maxima] >XP_022992645.1 G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 [Cucurbita maxima])

HSP 1 Score: 148.7 bits (374), Expect = 2.4e-32
Identity = 124/324 (38.27%), Postives = 144/324 (44.44%), Query Frame = 0


Query: 1   MNLRSRLF-CCISLLLAFLASMSVAAISLGSSLKASDPDQAWNSPGAIFSLRFLPSGLSS 60
           M+L S LF   I+L+L    S+SVAAISLGSSL+AS+P+Q W+S   IFSLRFLP+   S
Sbjct: 1   MDLHSHLFRYFIALVLCLSVSLSVAAISLGSSLRASNPNQTWDSANGIFSLRFLPA--DS 60

Query: 61  SSSSCIAGIVYFGKVFVIWSAGGGAPVDASGALHFQFDGN--LASSMAPVPSFGNLTPLA 120
           S SS IAGIV+ G V  IWSAGGGA VDASGALHFQ DGN  L      V    N T   
Sbjct: 61  SGSSFIAGIVFTGGVPTIWSAGGGATVDASGALHFQSDGNLRLVDGSGAVVWESNTTGRG 120

Query: 121 VASPPLYSRTPAIL----FIPLRPSFDNPTDTVVPLQNFTELIA---------------- 180
           V+S  L      IL       +  SFD+PTDT+VP QNFT  +                 
Sbjct: 121 VSSAVLEDSGNLILRNSSSQAVWSSFDHPTDTIVPSQNFTVGMVLRSGQYSFNLLNIGNI 180

Query: 181 --------------------------------------SLLAV----------------- 216
                                                  +LAV                 
Sbjct: 181 TLTWNGDGPNGDVVYWNHGLNTSINGSLNSPSLRLGSIGMLAVYDTRIPAGSFVAYSNDY 240

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BLAST of Carg01636 vs. NCBI nr
Match: XP_022133877.1 (G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 [Momordica charantia])

HSP 1 Score: 146.0 bits (367), Expect = 1.6e-31
Identity = 114/297 (38.38%), Postives = 127/297 (42.76%), Query Frame = 0


Query: 26  ISLGSSLKASDPDQAWNSPGAIFSLRFLPSGLSSSSSSCIAGIVYFGKVFVIWSAGGGAP 85
           ISLGSSLKAS+ +QAWNS    FS  F PSG+SSSS S IAGIVY G V  IWSAGGGA 
Sbjct: 33  ISLGSSLKASNLEQAWNSSNGDFSFGFRPSGVSSSSPSFIAGIVYTGGVPTIWSAGGGAA 92

Query: 86  VDASGALHFQFDGN--LASSMAPVPSFGNLTPLAVAS----PPLYSRTPAILFIPLRPSF 145
           VDASGALHF  DGN  L +    V    N T   VAS                       
Sbjct: 93  VDASGALHFDSDGNLRLVNGSGAVVWESNTTGRGVASAVXXXXXXXXXXXXXXXXXXXXX 152

Query: 146 DNPTDTVVPLQNFT------------ELIA------------------------------ 205
           D+PTDT+VP QNFT            EL++                              
Sbjct: 153 DHPTDTIVPSQNFTVGMVLQSGRYSFELLSVGNITLIWNGNGPNSDVVYWNHGLNTSING 212

Query: 206 ------------SLLAV---------------------------RLKQ------------ 217
                        +LAV                           RLK             
Sbjct: 213 TLNSPSLQLDPIGMLAVFDSKIPAGSFVAYSNDYADGADTLRFLRLKNDGNLEIHSVVRG 272

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BLAST of Carg01636 vs. NCBI nr
Match: XP_004141000.1 (PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 [Cucumis sativus])

HSP 1 Score: 145.2 bits (365), Expect = 2.7e-31
Identity = 119/321 (37.07%), Postives = 137/321 (42.68%), Query Frame = 0


Query: 1   MNLRSRLFCCISLLLAFLASMSVAAISLGSSLKASDPDQAWNSPGAIFSLRFLPSGLSSS 60
           MN  + LF C  +  AF  S S AAI+LGSSL+ASDP+QAWNS    FSL F P G    
Sbjct: 1   MNFHTHLFPCF-IAFAFAVSFSEAAITLGSSLRASDPNQAWNSSNGDFSLSFTPLG---- 60

Query: 61  SSSCIAGIVYFGKVFVIWSAGGGAPVDASGALHFQFDGN--LASSMAPVPSFGNLTPLAV 120
           SSS  AGIV+ G V  IWSAGGGA VDAS ALHFQ DGN  L S    V    + T L V
Sbjct: 61  SSSFKAGIVFTGGVPTIWSAGGGATVDASSALHFQSDGNLRLVSGSGAVVWESHTTGLGV 120

Query: 121 ASPPLYSRTPAILF----IPLRPSFDNPTDTVVPLQNFT--------------------- 180
           +S  L      +L      P+  SFD+PTDT+VP QNFT                     
Sbjct: 121 SSAVLEDTGNLVLLNSSSQPVWSSFDHPTDTIVPSQNFTLGMVLRSGQYSFKLLDVGNIT 180

Query: 181 --------ELI-----------------------ASLLAV-------------------- 217
                   ++I                         +LAV                    
Sbjct: 181 LTWNGDEGDVIYWNHGLNTSIGGTLNSPSLRLHSIGMLAVFDTRIPAGSFVAYSNDYAEN 240

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BLAST of Carg01636 vs. TAIR10
Match: AT1G34300.1 (lectin protein kinase family protein)

HSP 1 Score: 79.3 bits (194), Expect = 3.3e-15
Identity = 84/304 (27.63%), Postives = 114/304 (37.50%), Query Frame = 0


Query: 13  LLLAFLASMSVAAISLGSSLKASDPDQAWNSPGAIFSLRFLPSGLSSSSSSCIAGIVYFG 72
           LLL      S + I LGS + AS  +Q W SP + FS+ F+P   S S +S +A + + G
Sbjct: 14  LLLLLHFPFSFSTIPLGSVIYASGSNQNWPSPNSTFSVSFVP---SPSPNSFLAAVSFAG 73

Query: 73  KVFVIWSAGGGAPVDASGALHFQFDGN--LASSMAPVPSFGNLTPLAVASPPLYSRTPAI 132
            V  IWSAG    VD+ G+L     G+  L +             L V S  +      I
Sbjct: 74  SV-PIWSAG---TVDSRGSLRLHTSGSLRLTNGSGTTVWDSKTDRLGVTSGSIEDTGEFI 133

Query: 133 LF----IPLRPSFDNPTDTVVPLQNFTE---LIASLLAVRLKQ--------------W-- 192
           L     +P+  SFDNPTDT+V  QNFT    L + L + +L++              W  
Sbjct: 134 LLNNRSVPVWSSFDNPTDTIVQSQNFTAGKILRSGLYSFQLERSGNLTLRWNTSAIYWNH 193

Query: 193 -------------------------------------------------------DGTL- 217
                                                                  DG L 
Sbjct: 194 GLNSSFSSNLSSPRLSLQTNGVVSIFESNLLGGAEIVYSGDYGDSNTFRFLKLDDDGNLR 253

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BLAST of Carg01636 vs. Swiss-Prot
Match: sp|Q9XID3|Y1343_ARATH (G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 OS=Arabidopsis thaliana OX=3702 GN=At1g34300 PE=1 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 5.9e-14
Identity = 84/304 (27.63%), Postives = 114/304 (37.50%), Query Frame = 0


Query: 13  LLLAFLASMSVAAISLGSSLKASDPDQAWNSPGAIFSLRFLPSGLSSSSSSCIAGIVYFG 72
           LLL      S + I LGS + AS  +Q W SP + FS+ F+P   S S +S +A + + G
Sbjct: 14  LLLLLHFPFSFSTIPLGSVIYASGSNQNWPSPNSTFSVSFVP---SPSPNSFLAAVSFAG 73

Query: 73  KVFVIWSAGGGAPVDASGALHFQFDGN--LASSMAPVPSFGNLTPLAVASPPLYSRTPAI 132
            V  IWSAG    VD+ G+L     G+  L +             L V S  +      I
Sbjct: 74  SV-PIWSAG---TVDSRGSLRLHTSGSLRLTNGSGTTVWDSKTDRLGVTSGSIEDTGEFI 133

Query: 133 LF----IPLRPSFDNPTDTVVPLQNFTE---LIASLLAVRLKQ--------------W-- 192
           L     +P+  SFDNPTDT+V  QNFT    L + L + +L++              W  
Sbjct: 134 LLNNRSVPVWSSFDNPTDTIVQSQNFTAGKILRSGLYSFQLERSGNLTLRWNTSAIYWNH 193

Query: 193 -------------------------------------------------------DGTL- 217
                                                                  DG L 
Sbjct: 194 GLNSSFSSNLSSPRLSLQTNGVVSIFESNLLGGAEIVYSGDYGDSNTFRFLKLDDDGNLR 253

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BLAST of Carg01636 vs. TrEMBL
Match: tr|A0A0A0KCI5|A0A0A0KCI5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G052130 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.8e-31
Identity = 119/321 (37.07%), Postives = 137/321 (42.68%), Query Frame = 0


Query: 1   MNLRSRLFCCISLLLAFLASMSVAAISLGSSLKASDPDQAWNSPGAIFSLRFLPSGLSSS 60
           MN  + LF C  +  AF  S S AAI+LGSSL+ASDP+QAWNS    FSL F P G    
Sbjct: 1   MNFHTHLFPCF-IAFAFAVSFSEAAITLGSSLRASDPNQAWNSSNGDFSLSFTPLG---- 60

Query: 61  SSSCIAGIVYFGKVFVIWSAGGGAPVDASGALHFQFDGN--LASSMAPVPSFGNLTPLAV 120
           SSS  AGIV+ G V  IWSAGGGA VDAS ALHFQ DGN  L S    V    + T L V
Sbjct: 61  SSSFKAGIVFTGGVPTIWSAGGGATVDASSALHFQSDGNLRLVSGSGAVVWESHTTGLGV 120

Query: 121 ASPPLYSRTPAILF----IPLRPSFDNPTDTVVPLQNFT--------------------- 180
           +S  L      +L      P+  SFD+PTDT+VP QNFT                     
Sbjct: 121 SSAVLEDTGNLVLLNSSSQPVWSSFDHPTDTIVPSQNFTLGMVLRSGQYSFKLLDVGNIT 180

Query: 181 --------ELI-----------------------ASLLAV-------------------- 217
                   ++I                         +LAV                    
Sbjct: 181 LTWNGDEGDVIYWNHGLNTSIGGTLNSPSLRLHSIGMLAVFDTRIPAGSFVAYSNDYAEN 240

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BLAST of Carg01636 vs. TrEMBL
Match: tr|A0A1S3C543|A0A1S3C543_CUCME (G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 OS=Cucumis melo OX=3656 GN=LOC103496557 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 2.3e-31
Identity = 120/321 (37.38%), Postives = 137/321 (42.68%), Query Frame = 0


Query: 1   MNLRSRLFCCISLLLAFLASMSVAAISLGSSLKASDPDQAWNSPGAIFSLRFLPSGLSSS 60
           MN  + LF C  +  AF  S S AAI+LGSSL+AS P+QAWNS    FSL F P   SSS
Sbjct: 1   MNFHTHLFRCF-IAFAFAVSFSEAAITLGSSLRASVPNQAWNSSNGDFSLGFTPLD-SSS 60

Query: 61  SSSCIAGIVYFGKVFVIWSAGGGAPVDASGALHFQFDGN--LASSMAPVPSFGNLTPLAV 120
            SS   GIV+ G V  IWSAGGGA VDAS ALHFQ DGN  L S    V    N T L V
Sbjct: 61  GSSFKVGIVFTGGVPTIWSAGGGATVDASSALHFQSDGNLRLVSGSGAVVWESNTTGLGV 120

Query: 121 ASPPLYSRTPAILF----IPLRPSFDNPTDTVVPLQNFT------------ELI------ 180
           +S  L      +L      P+  SFD+PTDT+VP QNFT            +L+      
Sbjct: 121 SSAVLEDTGNLVLLNSSSQPVWSSFDHPTDTIVPSQNFTVGMVLRSGQYSFKLLDVGNIT 180

Query: 181 ----------------------------------ASLLAV-------------------- 217
                                               +LAV                    
Sbjct: 181 LTWNGDEGDVVYWNHGLNTSIGGTLNSPSLRLDPIGMLAVFDTRIPAGSFVAYSNDYADN 240

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BLAST of Carg01636 vs. TrEMBL
Match: tr|A0A1D5ZCM5|A0A1D5ZCM5_WHEAT (Uncharacterized protein OS=Triticum aestivum OX=4565 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 1.2e-19
Identity = 86/246 (34.96%), Postives = 109/246 (44.31%), Query Frame = 0


Query: 7   LFCCISLLLAFLASMSVAAISLGSSLKASDPDQAWNSPGAIFSLRFLPSGLSSSSSSCIA 66
           L C + LLL FL+      + LGS+L       AW+SP + FSL F PS  + S S  +A
Sbjct: 11  LCCFLLLLLPFLSHGK--DMPLGSTLTPGGNSAAWSSPNSTFSLAFAPSPTAPSLS--VA 70

Query: 67  GIVYFGKVFVIWSAGGGAPVDASGALHFQFDGNLA---SSMAPVPSFGNL---TPLAVAS 126
            + Y G + V WSAG GAPVD+ G+L     G+L     S A + S G        A   
Sbjct: 71  AVTYAGGISV-WSAGAGAPVDSGGSLRLSSTGDLQLVNGSGAVLWSSGTAGRGVSAAXXX 130

Query: 127 PPLYSRTPAILFIPLRPSFDNPTDTVVPLQNFTELIAS---LLAVRL------------- 186
                             FD+PTDTVV  QNF     S   L  VRL             
Sbjct: 131 XXXXXXXXXXXXXXXXXXFDHPTDTVVMSQNFANYGESGDMLRFVRLDSDGNFRAYSAGR 190

Query: 187 ------KQWDGTLFQISIFGFCGELSICSYNDTRPHCGCPSANFEAIDPNNLKNRCKRNT 225
                 +QW     Q  +FG+CG + +C YN T P C CPS NFE  D +N ++ CKR  
Sbjct: 191 GSGTATEQWSAVADQCEVFGYCGNMGVCGYNGTSPVCACPSLNFELNDASNPRSGCKRKV 250

[Close]

BLAST of Carg01636 vs. TrEMBL
Match: tr|A0A2P5FR26|A0A2P5FR26_9ROSA (S-receptor-like serine/threonine-protein kinase OS=Trema orientalis OX=63057 GN=TorRG33x02_040380 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 2.7e-19
Identity = 91/309 (29.45%), Postives = 122/309 (39.48%), Query Frame = 0


Query: 24  AAISLGSSLKASDPDQAWNSPGAIFSLRFLPSGLSSSSSSCIAGIVYFGKVFVIWSAGG- 83
           AAIS GSSL AS+P+Q W+SP + + L FLPS   +S  + IA + Y G V  IWSAGG 
Sbjct: 76  AAISPGSSLYASNPNQTWSSPNSTYFLGFLPSDPPTSPPTFIAAVAYAGGV-PIWSAGGV 135

Query: 84  -GAPVDASGALHFQFDGNL-------------------ASSMAPVPSFGNLTPLAVASPP 143
               VD+ GALHF+  GNL                    SS+A +   GNL  L   S  
Sbjct: 136 DSITVDSGGALHFESSGNLKLVNGSGYAVWNSGTGGRGVSSLA-IDDTGNLV-LRNGSGS 195

Query: 144 LYSRTPAILFIPLRPSFDNPTDTVVPLQNFT--ELIASLL-------------------- 203
           ++S            SFDNPTD++VP QNFT  +++ S L                    
Sbjct: 196 VWS------------SFDNPTDSMVPGQNFTVGKVLRSGLYSFTLNSNGNLTLEWNKTIV 255

Query: 204 ------------------------------------------------------------ 217
                                                                       
Sbjct: 256 YYNQGLNSSVNNNLSSPSLGLQPIGILSISDRKLTTPAIVAYSNDYAEGSDILRFLKLDN 315

[Close]

BLAST of Carg01636 vs. TrEMBL
Match: tr|K7K6Z0|K7K6Z0_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100795819 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.7e-18
Identity = 89/322 (27.64%), Postives = 126/322 (39.13%), Query Frame = 0


Query: 13  LLLAFLASMSVAAISLGSSLKASDPDQAWNSPGAIFSLRFLPSGLSSSSSSCIAGIVYFG 72
           L LA   +    AI  GS+L AS  +Q W+SP   FSLRF+     ++  S IA IV+ G
Sbjct: 10  LTLALATTTVTTAIDPGSTLAASSSNQTWSSPSGTFSLRFISVQPPTTPPSFIAAIVFSG 69

Query: 73  KVFVIWSAGGGAPVDASGALHFQFDGNL----------------ASSMAPVPSFGNLTPL 132
              V+WSAG GA VD++G+L F   G+L                 +S A +   GNL  +
Sbjct: 70  GAPVVWSAGNGAAVDSAGSLQFLRSGHLRLFNGSGATVWDTGTAGASSATLEDSGNLV-I 129

Query: 133 AVASPPLYSRTPAILFIPLRPSFDNPTDTVVPLQNFT--ELIAS---------------- 192
           + ++  L+S            SFD+PTDT+VP QNFT  +++ S                
Sbjct: 130 SNSTGSLWS------------SFDHPTDTLVPSQNFTVGKVLNSESYSFGLSSIGNLTLK 189

Query: 193 --------------------------LLAVRLKQ-------------------------- 223
                                     LL++ L Q                          
Sbjct: 190 WNNSIVYWTQGLNSSVNVSLDSPSLGLLSIGLLQLSDANLSPSIDVAYSSDYAEGNSDVM 249

The following BLAST results are available for this feature:

BLAST of Carg01636 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023550420.1	6.4e-33	38.27	G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 [Cucurbi...	[more]
XP_022133876.1	8.4e-33	39.32	LOW QUALITY PROTEIN: G-type lectin S-receptor-like serine/threonine-protein kina...	[more]
XP_022992644.1	2.4e-32	38.27	G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 [Cucurbi...	[more]
XP_022133877.1	1.6e-31	38.38	G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 [Momordi...	[more]
XP_004141000.1	2.7e-31	37.07	PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g343...	[more]

BLAST of Carg01636 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G34300.1	3.3e-15	27.63	lectin protein kinase family protein	[more]

BLAST of Carg01636 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9XID3\|Y1343_ARATH	5.9e-14	27.63	G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 OS=Arabi...	[more]

BLAST of Carg01636 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KCI5\|A0A0A0KCI5_CUCSA	1.8e-31	37.07	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G052130 PE=4 SV=1	[more]
tr\|A0A1S3C543\|A0A1S3C543_CUCME	2.3e-31	37.38	G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 OS=Cucum...	[more]
tr\|A0A1D5ZCM5\|A0A1D5ZCM5_WHEAT	1.2e-19	34.96	Uncharacterized protein OS=Triticum aestivum OX=4565 PE=4 SV=1	[more]
tr\|A0A2P5FR26\|A0A2P5FR26_9ROSA	2.7e-19	29.45	S-receptor-like serine/threonine-protein kinase OS=Trema orientalis OX=63057 GN=...	[more]
tr\|K7K6Z0\|K7K6Z0_SOYBN	1.7e-18	27.64	Uncharacterized protein OS=Glycine max OX=3847 GN=100795819 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg01636-RA	Carg01636-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR27002:SF52	SUBFAMILY NOT NAMED	coord: 7..154
None	No IPR available	PANTHER	PTHR27002	FAMILY NOT NAMED	coord: 7..154

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg01636	Cp4.1LG13g10790	Cucurbita pepo (Zucchini)	carcpeB1157
Carg01636	CsGy6G004380	Cucumber (Gy14) v2	carcgybB0824
Carg01636	Cla97C08G151530	Watermelon (97103) v2	carwmbB0864
Carg01636	Bhi04G001272	Wax gourd	carwgoB0965

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg01636	Silver-seed gourd	carcarB076
Carg01636	Cucumber (Gy14) v1	carcgyB0955
Carg01636	Cucurbita maxima (Rimu)	carcmaB1148
Carg01636	Cucurbita maxima (Rimu)	carcmaB1150
Carg01636	Cucurbita moschata (Rifu)	carcmoB1118
Carg01636	Cucurbita moschata (Rifu)	carcmoB1121
Carg01636	Cucurbita pepo (Zucchini)	carcpeB1158
Carg01636	Wild cucumber (PI 183967)	carcpiB0870
Carg01636	Cucumber (Chinese Long) v2	carcuB0850
Carg01636	Cucumber (Chinese Long) v3	carcucB0874
Carg01636	Bottle gourd (USVL1VR-Ls)	carlsiB758
Carg01636	Melon (DHL92) v3.5.1	carmeB0823
Carg01636	Melon (DHL92) v3.6.1	carmedB0834
Carg01636	Watermelon (Charleston Gray)	carwcgB0805
Carg01636	Watermelon (97103) v1	carwmB0826