Carg01220 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg01220
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Homeobox associated leucine zipper protein
Location	Cucurbita_argyrosperma_scaffold_002 : 1546993 .. 1549435 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTTGGGTTTGAGGCTTGGTGATGCTCCCAATTCAAATAATCCATTTGGGGTTCGCTCTATTCCTTCTTCTTCTTCTCTCATGGCTTTAGGGTTTTGTGTTGGATTGGGACGTGGTTCTGGTTCTGGTTCCGGTTCCGGTTCCGGTTCCGGTTTGGTTCGTGATGAGGATGGAAGAGATGTAAAAGATGAAGATGAGGATGATGATGAAAAAGCTATTCCCGGTTCTGGGTACGGTTTGGATCCGCCGGTTCAGCTGGATCTTCTTCCTTTGTCTCCGGTTCCTCGTTCTTCTCATCAATCTTCTTCTCCCCTTCCATTTTCCTGCCTTTCTCATCGCTGTAAATACTCTCTCCTCCTCCTCTTCCTTCATTCATTCATATATATATATATATATATATATATATAATATGTTAGCACGTATTATTATTTTTTGGCTTTATTTCAAAGTTTTTGAAATGGGTCGGAGGTTTTAACCCTCTTATAAAAATGTTTTATTTCTCTTATCGGTGGGATTTCACAATTTACTTCCTATCCAACGTCTTTATGGATACTAATTTGCATGTGTGATCTCACAATTCACTCCCTTTGAGACTCACGTTCCTCGCTAGCACGAATTCTGTGAGATCTCAAAATTTACCCTATTCGAGACTAACATCCTCGATAGTATTCATTCATCTCTCCAATCGGAGTGGGATCTCACAATGGGTTGAATAAGGAAACGAAACATTCTAAGGATGTGGAAATGTGTCACGAGTAGTCGTGTTTTAAAATTTTTGAGAGAATGTCTGAAAGTGAAAGTATAAAAAGAATAATATCGGTTAGCGGTGAACTTCAGCCGTTACAATTTTTCTGTAGTTATTATTTGATGGGTTTTGTTAAAGATTAGATTTTTGATGATCCAAGAATTAAAACTTGGGGAATTGGGTCAATTTGAAGTGAATCTCTGGTGCTATTTGTGCAGTGATGCCGGAACTGGGTTGTACGGACAAAGTATTGGACGTAAACCGGCCGCCGGCGTTGGCGGCGGGCGTGGCAATGGTACCGGCGGAGGAGACAGAAGACAAGTCTCCGAACAGTGCGGTAACATCTTTCCAAATGGATTTTGGGGTCAGAAATGGAGGAGGAAGAGGAAGAACAAGAAGCAAGAGATCATCAGACATGGAAATGGAGACCGAAAGGTCGTCGTCAAGAATCAGTGACGATGAAGAAAACGCGTCTGCTCGGAAAAAGCTCCGACTTTCTAAAGAACAATCGGCTTTTCTCGAACAAAGCTTCAAACAACACAGCACCCTCAATCCTGTAAGTCCCCCTTTTATTTCAAAACCCCATTTTTTTTTTTTTTAATTATAATTGCAAATCATTTATTTGTAATATATAAACCCTAATAATTTCATATCCAAATTACAGAAGCAGAAGGCAGCACTGGCCAAGCAGCTAAATCTCCGACCAAGACAAGTGGAGGTTTGGTTTCAAAACAGAAGAGCAAGGTATACATGTTTGTCCACTTTAGACTTTCCGTTCGAGCTTACCCTCAAACTGGTGGAGAGGTTTTACACCCTTATCAAGGTTATAAATGGTGTTTCGTTCTCCTCCCCAATCGATGTGGAATATCACAATCCACCTTTTTTCAGGGTCCAGCATCCTCGCTGACAATCATTCATTTCTCTAATCGATGTGAGACTCCTACCAAATCCACCCCCCTTTGTGGTCCAGCGTCCTTGCTCGCACACCGCATCATGTTTACCTCTTTCGGAGAACAGCCTCCTCATTGACACATAACCGTGTCTACCCCTTTCGAGGAACAACCTCCTCGTTGACACATCACCCATGTTTACCCTTTTTGCAGAACAGCCTCCTCGTTGACACATCACCTAGTGTCTGGCTTTGATACCATTTGTAACGGTCTAAGCCCACCATTAGTAGATATTGTCTTCTTTGGTCTTTCCCTTTCGAGCTTACTCTCAAAATTTTTAAAATGCTTCTATTAGGAAGAGATTTTCACACTCTTATATAATGAGTGTTTTTCTCCTCCCGACGTGAGATGTCACACACACGTATATACATACATACACACAAATAAATAAATAAATATATATATATATATATATATATATATATATATATTAATGAATTTTGTCGGTAAAATCATTAATAACTCCGAAAATTTGATGGATTTTAGGACAAAGTTGAAGCAGACAGAAGAGGATTGTGAGTACTTAAAGAGATGGTGTGAGACATTGACAGAAGAGAACAGAAGATTACAAAAGGAACTTCAAGAACTAAGAGCCTTCAAAGCTTCTCAGCCGTTTTACAGTCACCTCCCAGCCACCACCCTCACCATGTGCCCGTCCTGCGAGCGGGTCGTCGCCACCGCTCCCGCCGCCTCCATCGCCACCACCTGCACCATCACCGCCGCCCCGCCAAGGATATTGATATGA

mRNA sequence

ATGGAGTTGGGTTTGAGGCTTGGTGATGCTCCCAATTCAAATAATCCATTTGGGGTTCGCTCTATTCCTTCTTCTTCTTCTCTCATGGCTTTAGGGTTTTGTGTTGGATTGGGACGTGGTTCTGGTTCTGGTTCCGGTTCCGGTTCCGGTTCCGGTTTGGTTCGTGATGAGGATGGAAGAGATGTAAAAGATGAAGATGAGGATGATGATGAAAAAGCTATTCCCGGTTCTGGGTACGGTTTGGATCCGCCGGTTCAGCTGGATCTTCTTCCTTTGTCTCCGGTTCCTCGTTCTTCTCATCAATCTTCTTCTCCCCTTCCATTTTCCTGCCTTTCTCATCGCTTGATGCCGGAACTGGGTTGTACGGACAAAGTATTGGACGTAAACCGGCCGCCGGCGTTGGCGGCGGGCGTGGCAATGGTACCGGCGGAGGAGACAGAAGACAAGTCTCCGAACAGTGCGGTAACATCTTTCCAAATGGATTTTGGGGTCAGAAATGGAGGAGGAAGAGGAAGAACAAGAAGCAAGAGATCATCAGACATGGAAATGGAGACCGAAAGGTCGTCGTCAAGAATCAGTGACGATGAAGAAAACGCGTCTGCTCGGAAAAAGCTCCGACTTTCTAAAGAACAATCGGCTTTTCTCGAACAAAGCTTCAAACAACACAGCACCCTCAATCCTAAGCAGAAGGCAGCACTGGCCAAGCAGCTAAATCTCCGACCAAGACAAGTGGAGGTTTGGTTTCAAAACAGAAGAGCAAGGACAAAGTTGAAGCAGACAGAAGAGGATTGTGAGTACTTAAAGAGATGGTGTGAGACATTGACAGAAGAGAACAGAAGATTACAAAAGGAACTTCAAGAACTAAGAGCCTTCAAAGCTTCTCAGCCGTTTTACAGTCACCTCCCAGCCACCACCCTCACCATGTGCCCGTCCTGCGAGCGGGTCGTCGCCACCGCTCCCGCCGCCTCCATCGCCACCACCTGCACCATCACCGCCGCCCCGCCAAGGATATTGATATGA

Coding sequence (CDS)

ATGGAGTTGGGTTTGAGGCTTGGTGATGCTCCCAATTCAAATAATCCATTTGGGGTTCGCTCTATTCCTTCTTCTTCTTCTCTCATGGCTTTAGGGTTTTGTGTTGGATTGGGACGTGGTTCTGGTTCTGGTTCCGGTTCCGGTTCCGGTTCCGGTTTGGTTCGTGATGAGGATGGAAGAGATGTAAAAGATGAAGATGAGGATGATGATGAAAAAGCTATTCCCGGTTCTGGGTACGGTTTGGATCCGCCGGTTCAGCTGGATCTTCTTCCTTTGTCTCCGGTTCCTCGTTCTTCTCATCAATCTTCTTCTCCCCTTCCATTTTCCTGCCTTTCTCATCGCTTGATGCCGGAACTGGGTTGTACGGACAAAGTATTGGACGTAAACCGGCCGCCGGCGTTGGCGGCGGGCGTGGCAATGGTACCGGCGGAGGAGACAGAAGACAAGTCTCCGAACAGTGCGGTAACATCTTTCCAAATGGATTTTGGGGTCAGAAATGGAGGAGGAAGAGGAAGAACAAGAAGCAAGAGATCATCAGACATGGAAATGGAGACCGAAAGGTCGTCGTCAAGAATCAGTGACGATGAAGAAAACGCGTCTGCTCGGAAAAAGCTCCGACTTTCTAAAGAACAATCGGCTTTTCTCGAACAAAGCTTCAAACAACACAGCACCCTCAATCCTAAGCAGAAGGCAGCACTGGCCAAGCAGCTAAATCTCCGACCAAGACAAGTGGAGGTTTGGTTTCAAAACAGAAGAGCAAGGACAAAGTTGAAGCAGACAGAAGAGGATTGTGAGTACTTAAAGAGATGGTGTGAGACATTGACAGAAGAGAACAGAAGATTACAAAAGGAACTTCAAGAACTAAGAGCCTTCAAAGCTTCTCAGCCGTTTTACAGTCACCTCCCAGCCACCACCCTCACCATGTGCCCGTCCTGCGAGCGGGTCGTCGCCACCGCTCCCGCCGCCTCCATCGCCACCACCTGCACCATCACCGCCGCCCCGCCAAGGATATTGATATGA

Protein sequence

MELGLRLGDAPNSNNPFGVRSIPSSSSLMALGFCVGLGRGSGSGSGSGSGSGLVRDEDGRDVKDEDEDDDEKAIPGSGYGLDPPVQLDLLPLSPVPRSSHQSSSPLPFSCLSHRLMPELGCTDKVLDVNRPPALAAGVAMVPAEETEDKSPNSAVTSFQMDFGVRNGGGRGRTRSKRSSDMEMETERSSSRISDDEENASARKKLRLSKEQSAFLEQSFKQHSTLNPKQKAALAKQLNLRPRQVEVWFQNRRARTKLKQTEEDCEYLKRWCETLTEENRRLQKELQELRAFKASQPFYSHLPATTLTMCPSCERVVATAPAASIATTCTITAAPPRILI

Homology

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BLAST of Carg01220 vs. NCBI nr
Match: XP_022930228.1 (homeobox-leucine zipper protein HOX11-like [Cucurbita moschata])

HSP 1 Score: 446.0 bits (1146), Expect = 1.1e-121
Identity = 316/339 (93.22%), Postives = 319/339 (94.10%), Query Frame = 0


Query: 1   MELGLRLGDAPNSNNPFGVRSIPSSSSLMALGFCVXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MELGLRLGDAPNSNNPFGVRSIPSSSSLMALGFCV    XXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MELGLRLGDAPNSNNPFGVRSIPSSSSLMALGFCV----XXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXIPGSGYGLDPPVQLDLLPLSPVPRSSHQSSSPLPFSCLSHRLMPELG 120
           XXXXXXXXXXXXX         PPVQLDLLPL+PVPRSSHQSSSPLPFSCLSH LMPELG
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXPPVQLDLLPLAPVPRSSHQSSSPLPFSCLSHPLMPELG 120

Query: 121 CTDKVLDVNRPPALAAGVAMVPAEETEDKSPNSAVTSFQMDFGVRNGGXXXXXXXXXXXX 180
           CTDKVLDVNRPPALAA VAM+PAEETED+SPNS VTSFQMDFGVRNG XXXXXXXXXXXX
Sbjct: 121 CTDKVLDVNRPPALAAAVAMIPAEETEDQSPNSTVTSFQMDFGVRNGXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXKLRLSKEQSAFLEQSFKQHSTLNPKQKAALAKQLNLR 240
           XXXXXXXXXXXXXXXXXXXXXXX   LSKEQSAFLEQSFKQHSTLNPKQKAALAKQLNLR
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXLSKEQSAFLEQSFKQHSTLNPKQKAALAKQLNLR 240

Query: 241 PRQVEVWFQNRRARTKLKQTEEDCEYLKRWCETLTEENRRLQKELQELRAFKASQPFYSH 300
           PRQVEVWFQNRRARTKLKQTEEDCEYLKRWCETLTEENRRLQKELQELRAFKASQPFYSH
Sbjct: 241 PRQVEVWFQNRRARTKLKQTEEDCEYLKRWCETLTEENRRLQKELQELRAFKASQPFYSH 300

Query: 301 LPATTLTMCPSCERVVATAPAASIATTCTITAAPPRILI 340
           LPATTLTMCPSCERVVATAPAASIATTCTITAAPPRILI
Sbjct: 301 LPATTLTMCPSCERVVATAPAASIATTCTITAAPPRILI 335

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BLAST of Carg01220 vs. NCBI nr
Match: XP_022971346.1 (homeobox-leucine zipper protein HOX11-like [Cucurbita maxima])

HSP 1 Score: 443.7 bits (1140), Expect = 5.5e-121
Identity = 318/345 (92.17%), Postives = 321/345 (93.04%), Query Frame = 0


Query: 1   MELGLRLGDAPNSNNPFGVRSIP----SSSSLMALGFCV--XXXXXXXXXXXXXXXXXXX 60
           MELGLRLGDAPNSNNPFGVRSIP    SSSSLMALGFCV  XXXXXXXXXXXXXXXXXXX
Sbjct: 1   MELGLRLGDAPNSNNPFGVRSIPSHNLSSSSLMALGFCVXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXIPGSGYGLDPPVQLDLLPLSPVPRSSHQSSSPLPFSCLSHR 120
           XXXXXXXXXXXXXXX    IPGSGYGLDPPVQLDLLPL+PVPRSS QSSSPLPFSCL H 
Sbjct: 61  XXXXXXXXXXXXXXXDEKTIPGSGYGLDPPVQLDLLPLAPVPRSSPQSSSPLPFSCLPHP 120

Query: 121 LMPELGCTDKVLDVNRPPALAAGVAMVPAEETEDKSPNSAVTSFQMDFGVRNGGXXXXXX 180
           LMPELGCTDKVLDV+RPPALAA VAM+PAEETEDKSPNS VTSFQMDFGVRNG XXXXXX
Sbjct: 121 LMPELGCTDKVLDVSRPPALAAAVAMIPAEETEDKSPNSTVTSFQMDFGVRNGXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLRLSKEQSAFLEQSFKQHSTLNPKQKAALA 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLRLSKEQSAFLEQ FKQHSTLNPKQKAALA
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLRLSKEQSAFLEQCFKQHSTLNPKQKAALA 240

Query: 241 KQLNLRPRQVEVWFQNRRARTKLKQTEEDCEYLKRWCETLTEENRRLQKELQELRAFKAS 300
           KQLNLRPRQVEVWFQNRRARTKLKQTEEDCEYLKRWCETLTEENRRLQKELQELRAFKAS
Sbjct: 241 KQLNLRPRQVEVWFQNRRARTKLKQTEEDCEYLKRWCETLTEENRRLQKELQELRAFKAS 300

Query: 301 QPFYSHLPATTLTMCPSCERVVATAPAASIATTCTITAAPPRILI 340
           QPFYSHLPATTLTMCPSCERVVATAPAASIA       APPRILI
Sbjct: 301 QPFYSHLPATTLTMCPSCERVVATAPAASIAXXXXXXXAPPRILI 345

[Close]

BLAST of Carg01220 vs. NCBI nr
Match: XP_023539558.1 (homeobox-leucine zipper protein HOX11-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 442.2 bits (1136), Expect = 1.6e-120
Identity = 302/339 (89.09%), Postives = 304/339 (89.68%), Query Frame = 0


Query: 1   MELGLRLGDAPNSNNPFGVRSIPSSSSLMALGFCVXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MELGLRLGDAPNSNNPFGVRSIPSSSS        XXXXXXXXXXXXXXXXXXXXXX   
Sbjct: 1   MELGLRLGDAPNSNNPFGVRSIPSSSS-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHD 60

Query: 61  XXXXXXXXXXXXXIPGSGYGLDPPVQLDLLPLSPVPRSSHQSSSPLPFSCLSHRLMPELG 120
                        IPGSGYGLDPPVQLDLLPL+PVPRSSHQSSS LPFSCLSHRLMPELG
Sbjct: 61  EDGRDVKDDDEKTIPGSGYGLDPPVQLDLLPLAPVPRSSHQSSSTLPFSCLSHRLMPELG 120

Query: 121 CTDKVLDVNRPPALAAGVAMVPAEETEDKSPNSAVTSFQMDFGVRNGGXXXXXXXXXXXX 180
           CTDKVLDVNRPPALAA V M+P EETEDKSPNS VTSFQMDFGVRNG XXXXXXXXXXXX
Sbjct: 121 CTDKVLDVNRPPALAAAVEMIPVEETEDKSPNSTVTSFQMDFGVRNGXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXKLRLSKEQSAFLEQSFKQHSTLNPKQKAALAKQLNLR 240
           XXXXXXXXXXXXXXXXXXXXXXX LRLSKEQSAFLEQSFKQHSTLNPKQKAALAKQLNLR
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXLRLSKEQSAFLEQSFKQHSTLNPKQKAALAKQLNLR 240

Query: 241 PRQVEVWFQNRRARTKLKQTEEDCEYLKRWCETLTEENRRLQKELQELRAFKASQPFYSH 300
           PRQVEVWFQNRRARTKLKQTEEDCEYLKRWCETLTEENRRLQKELQELRAFKASQPFYSH
Sbjct: 241 PRQVEVWFQNRRARTKLKQTEEDCEYLKRWCETLTEENRRLQKELQELRAFKASQPFYSH 300

Query: 301 LPATTLTMCPSCERVVATAPAASIATTCTITAAPPRILI 340
           LPATTLTMCPSCERVVATAPA SIATT T  AAPPRILI
Sbjct: 301 LPATTLTMCPSCERVVATAPATSIATTSTTAAAPPRILI 338

[Close]

BLAST of Carg01220 vs. NCBI nr
Match: XP_022151365.1 (homeobox-leucine zipper protein HOX11 isoform X1 [Momordica charantia])

HSP 1 Score: 288.1 bits (736), Expect = 3.9e-74
Identity = 231/370 (62.43%), Postives = 245/370 (66.22%), Query Frame = 0


Query: 1   MELGLRLGDAP-NSNNPFGVRSIP-------SSSSLMALGFCV-----------XXXXXX 60
           MEL L LGD P N+N PFG  S P       S+S  MALGFCV           XXXXXX
Sbjct: 1   MELALSLGDTPTNNNKPFGFLSKPSKLSSSSSASPFMALGFCVGLARDXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPGSGYGLDPPVQLDLLPLSPVPRSSHQ 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             LDLLP +PVPRS H 
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDLLPPAPVPRSHHS 120

Query: 121 SSSPLPFSCLSHRLMPELGCTD----KVLDVNRPPALAAGVAMVPAEETEDK-------- 180
           SSS LPF  LS  LM E GC+D    +VLDVNR PA+       PAEET+D+        
Sbjct: 121 SSSHLPFPWLSDHLMAERGCSDGGAERVLDVNRLPAVG------PAEETDDRAAAAAAGM 180

Query: 181 -SPNSAVTSFQMDFGVRNGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLRLS 240
            SPNSAV+SFQMDFGVRNGG                                   KLRLS
Sbjct: 181 SSPNSAVSSFQMDFGVRNGG-----GSKRSSDFEMETERASSRISDDDENGSARKKLRLS 240

Query: 241 KEQSAFLEQSFKQHSTLNPKQKAALAKQLNLRPRQVEVWFQNRRARTKLKQTEEDCEYLK 300
           KEQSAFLE+SFK+HSTLNPKQK ALAKQLNLRPRQVEVWFQNRRARTKLKQTE DCEYL+
Sbjct: 241 KEQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLR 300

Query: 301 RWCETLTEENRRLQKELQELRAFKASQPFYSHLPATTLTMCPSCERVVATAPAASIATTC 339
           R CETLTEENRRLQKELQELRA K SQPFY  LPATTLTMCPSCERV  TAP A +A T 
Sbjct: 301 RCCETLTEENRRLQKELQELRALKTSQPFYMQLPATTLTMCPSCERVATTAP-APVAKTT 358

[Close]

BLAST of Carg01220 vs. NCBI nr
Match: XP_023528249.1 (homeobox-leucine zipper protein HOX11-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 287.3 bits (734), Expect = 6.6e-74
Identity = 206/348 (59.20%), Postives = 218/348 (62.64%), Query Frame = 0


Query: 1   MELGLRLGDAPNSNNPFGV-------RSIPSSSSLMALGFCVXXXXXXXXXXXXXXXXXX 60
           MEL L LGDAP SN PFG         S  SSSSLMALGFCV                XX
Sbjct: 1   MELALSLGDAPISNKPFGFLSNGVSKLSSSSSSSLMALGFCVGLAHDSASGSPSGSVHXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXIPGSGYGLDPPVQLDLLPLSPVPRSSHQSSSPLPFSCLSH 120
           XXXXXXXXXXXXXX            G DPPVQL+LLP +PVPRSSH     L F  LS 
Sbjct: 61  XXXXXXXXXXXXXXLS----------GSDPPVQLELLPSAPVPRSSH-----LRFPWLSD 120

Query: 121 RLMPELGCTDKVLDVNRPPALAAGVAMVPAEETEDK--------SPNSAVTSFQMDFGVR 180
            L+PE G     LDVNR PA+AA      AEETED+        SPNS V+SFQMDFGVR
Sbjct: 121 HLIPE-GEERVALDVNRRPAVAA------AEETEDRAAVTAALSSPNSTVSSFQMDFGVR 180

Query: 181 NGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLRLSKEQSAFLEQSFKQHSTL 240
                                                 KLRLSK+QSAFLE+SFK+HSTL
Sbjct: 181 ASS----------------------RISDDEENGSARKKLRLSKDQSAFLEESFKEHSTL 240

Query: 241 NPKQKAALAKQLNLRPRQVEVWFQNRRARTKLKQTEEDCEYLKRWCETLTEENRRLQKEL 300
           NPKQK ALAKQLNLRPRQVEVWFQNRRARTKLKQTE DCEYL+R CETLTEENRRLQKEL
Sbjct: 241 NPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLRRCCETLTEENRRLQKEL 300

Query: 301 QELRAFKASQPFYSHLPATTLTMCPSCERVVATAPAASIATTCTITAA 334
           QELRA K SQPFY  LPATTLTMCPSCERV    PAAS+AT  T+  A
Sbjct: 301 QELRALKTSQPFYMQLPATTLTMCPSCERVATATPAASVATKTTVXVA 304

[Close]

BLAST of Carg01220 vs. TAIR10
Match: AT5G06710.1 (homeobox from Arabidopsis thaliana)

HSP 1 Score: 196.4 bits (498), Expect = 2.8e-50
Identity = 113/193 (58.55%), Postives = 129/193 (66.84%), Query Frame = 0


Query: 151 PNSAVTSFQMDFGVRNGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLRLSKE 210
           P+S  +SFQ+DFG+++ G                                   KLRLSK+
Sbjct: 138 PDSVTSSFQLDFGIKSYGYERRSNKRDIDDEVERSASRASNEDNDDENGSTRKKLRLSKD 197

Query: 211 QSAFLEQSFKQHSTLNPKQKAALAKQLNLRPRQVEVWFQNRRARTKLKQTEEDCEYLKRW 270
           QSAFLE SFK+HSTLNPKQK ALAKQLNLRPRQVEVWFQNRRARTKLKQTE DCEYLKR 
Sbjct: 198 QSAFLEDSFKEHSTLNPKQKIALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRC 257

Query: 271 CETLTEENRRLQKELQELRAFKASQPFYSHLPATTLTMCPSCERVVATA--PAASIA--- 330
           CE+LTEENRRLQKE++ELR  K S PFY  LPATTLTMCPSCERV  +A  P+ S A   
Sbjct: 258 CESLTEENRRLQKEVKELRTLKTSTPFYMQLPATTLTMCPSCERVATSAAQPSTSAAHNL 317

Query: 331 --TTCTITAAPPR 337
             +T ++    PR
Sbjct: 318 CLSTSSLIPVKPR 330

[Close]

BLAST of Carg01220 vs. TAIR10
Match: AT4G37790.1 (Homeobox-leucine zipper protein family)

HSP 1 Score: 183.7 bits (465), Expect = 1.9e-46
Identity = 91/112 (81.25%), Postives = 102/112 (91.07%), Query Frame = 0


Query: 204 KLRLSKEQSAFLEQSFKQHSTLNPKQKAALAKQLNLRPRQVEVWFQNRRARTKLKQTEED 263
           KLRL+K+QSA LE +FK HSTLNPKQK ALA+QLNLRPRQVEVWFQNRRARTKLKQTE D
Sbjct: 127 KLRLTKQQSALLEDNFKLHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVD 186

Query: 264 CEYLKRWCETLTEENRRLQKELQELRAFKASQPFYSHLPATTLTMCPSCERV 316
           CE+LK+ CETLT+ENRRLQKELQ+L+A K SQPFY H+PA TLTMCPSCER+
Sbjct: 187 CEFLKKCCETLTDENRRLQKELQDLKALKLSQPFYMHMPAATLTMCPSCERL 238

[Close]

BLAST of Carg01220 vs. TAIR10
Match: AT2G22800.1 (Homeobox-leucine zipper protein family)

HSP 1 Score: 176.4 bits (446), Expect = 3.0e-44
Identity = 86/112 (76.79%), Postives = 99/112 (88.39%), Query Frame = 0


Query: 204 KLRLSKEQSAFLEQSFKQHSTLNPKQKAALAKQLNLRPRQVEVWFQNRRARTKLKQTEED 263
           KLRL+K+QSA LE+SFK HSTLNPKQK  LA+QLNLRPRQVEVWFQNRRARTKLKQTE D
Sbjct: 114 KLRLTKQQSALLEESFKDHSTLNPKQKQVLARQLNLRPRQVEVWFQNRRARTKLKQTEVD 173

Query: 264 CEYLKRWCETLTEENRRLQKELQELRAFKASQPFYSHLPATTLTMCPSCERV 316
           CE+LK+ CETL +EN RLQKE+QEL+  K +QPFY H+PA+TLT CPSCER+
Sbjct: 174 CEFLKKCCETLADENIRLQKEIQELKTLKLTQPFYMHMPASTLTKCPSCERI 225

[Close]

BLAST of Carg01220 vs. TAIR10
Match: AT3G60390.1 (homeobox-leucine zipper protein 3)

HSP 1 Score: 172.6 bits (436), Expect = 4.3e-43
Identity = 93/131 (70.99%), Postives = 107/131 (81.68%), Query Frame = 0


Query: 205 LRLSKEQSAFLEQSFKQHSTLNPKQKAALAKQLNLRPRQVEVWFQNRRARTKLKQTEEDC 264
           LRLSKEQ+  LE++FK+HSTLNPKQK ALAKQLNLR RQVEVWFQNRRARTKLKQTE DC
Sbjct: 164 LRLSKEQALVLEETFKEHSTLNPKQKMALAKQLNLRTRQVEVWFQNRRARTKLKQTEVDC 223

Query: 265 EYLKRWCETLTEENRRLQKELQELRAFKASQPFYSHL-PATTLTMCPSCERVVATAPAAS 324
           EYLKR CE LT+ENRRLQKE+ ELRA K S   Y H+ P TTLTMCPSCERV  T+ ++S
Sbjct: 224 EYLKRCCENLTDENRRLQKEVSELRALKLSPHLYMHMKPPTTLTMCPSCERVAVTSSSSS 283

Query: 325 IATTCTITAAP 335
           +A     +++P
Sbjct: 284 VAPPVMNSSSP 294

[Close]

BLAST of Carg01220 vs. TAIR10
Match: AT2G44910.1 (homeobox-leucine zipper protein 4)

HSP 1 Score: 169.1 bits (427), Expect = 4.7e-42
Identity = 89/116 (76.72%), Postives = 99/116 (85.34%), Query Frame = 0


Query: 205 LRLSKEQSAFLEQSFKQHSTLNPKQKAALAKQLNLRPRQVEVWFQNRRARTKLKQTEEDC 264
           LRLSK+Q+  LE++FK+HSTLNPKQK ALAKQLNLR RQVEVWFQNRRARTKLKQTE DC
Sbjct: 165 LRLSKDQALVLEETFKEHSTLNPKQKLALAKQLNLRARQVEVWFQNRRARTKLKQTEVDC 224

Query: 265 EYLKRWCETLTEENRRLQKELQELRAFKASQPFYSHL-PATTLTMCPSCERVVATA 320
           EYLKR C+ LTEENRRLQKE+ ELRA K S   Y H+ P TTLTMCPSCERV ++A
Sbjct: 225 EYLKRCCDNLTEENRRLQKEVSELRALKLSPHLYMHMTPPTTLTMCPSCERVSSSA 280

[Close]

BLAST of Carg01220 vs. Swiss-Prot
Match: sp|P46665|HAT14_ARATH (Homeobox-leucine zipper protein HAT14 OS=Arabidopsis thaliana OX=3702 GN=HAT14 PE=2 SV=3)

HSP 1 Score: 196.4 bits (498), Expect = 5.0e-49
Identity = 113/193 (58.55%), Postives = 129/193 (66.84%), Query Frame = 0


Query: 151 PNSAVTSFQMDFGVRNGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLRLSKE 210
           P+S  +SFQ+DFG+++ G                                   KLRLSK+
Sbjct: 138 PDSVTSSFQLDFGIKSYGYERRSNKRDIDDEVERSASRASNEDNDDENGSTRKKLRLSKD 197

Query: 211 QSAFLEQSFKQHSTLNPKQKAALAKQLNLRPRQVEVWFQNRRARTKLKQTEEDCEYLKRW 270
           QSAFLE SFK+HSTLNPKQK ALAKQLNLRPRQVEVWFQNRRARTKLKQTE DCEYLKR 
Sbjct: 198 QSAFLEDSFKEHSTLNPKQKIALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRC 257

Query: 271 CETLTEENRRLQKELQELRAFKASQPFYSHLPATTLTMCPSCERVVATA--PAASIA--- 330
           CE+LTEENRRLQKE++ELR  K S PFY  LPATTLTMCPSCERV  +A  P+ S A   
Sbjct: 258 CESLTEENRRLQKEVKELRTLKTSTPFYMQLPATTLTMCPSCERVATSAAQPSTSAAHNL 317

Query: 331 --TTCTITAAPPR 337
             +T ++    PR
Sbjct: 318 CLSTSSLIPVKPR 330

[Close]

BLAST of Carg01220 vs. Swiss-Prot
Match: sp|A2Z1U1|HOX11_ORYSI (Homeobox-leucine zipper protein HOX11 OS=Oryza sativa subsp. indica OX=39946 GN=HOX11 PE=2 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.2e-47
Identity = 98/114 (85.96%), Postives = 103/114 (90.35%), Query Frame = 0


Query: 206 RLSKEQSAFLEQSFKQHSTLNPKQKAALAKQLNLRPRQVEVWFQNRRARTKLKQTEEDCE 265
           RLSKEQSAFLE+SFK+HSTLNPKQK ALAKQLNLRPRQVEVWFQNRRARTKLKQTE DCE
Sbjct: 93  RLSKEQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCE 152

Query: 266 YLKRWCETLTEENRRLQKELQELRAFKASQPFYSHLPATTLTMCPSCERVVATA 320
           YLKR CETLTEENRRLQKEL ELRA K   PFY HLPATTL+MCPSCERV + +
Sbjct: 153 YLKRCCETLTEENRRLQKELAELRALKTVHPFYMHLPATTLSMCPSCERVASNS 206

[Close]

BLAST of Carg01220 vs. Swiss-Prot
Match: sp|Q67UE2|HOX11_ORYSJ (Homeobox-leucine zipper protein HOX11 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX11 PE=2 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.2e-47
Identity = 98/114 (85.96%), Postives = 103/114 (90.35%), Query Frame = 0


Query: 206 RLSKEQSAFLEQSFKQHSTLNPKQKAALAKQLNLRPRQVEVWFQNRRARTKLKQTEEDCE 265
           RLSKEQSAFLE+SFK+HSTLNPKQK ALAKQLNLRPRQVEVWFQNRRARTKLKQTE DCE
Sbjct: 180 RLSKEQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCE 239

Query: 266 YLKRWCETLTEENRRLQKELQELRAFKASQPFYSHLPATTLTMCPSCERVVATA 320
           YLKR CETLTEENRRLQKEL ELRA K   PFY HLPATTL+MCPSCERV + +
Sbjct: 240 YLKRCCETLTEENRRLQKELAELRALKTVHPFYMHLPATTLSMCPSCERVASNS 293

[Close]

BLAST of Carg01220 vs. Swiss-Prot
Match: sp|A2YW03|HOX27_ORYSI (Homeobox-leucine zipper protein HOX27 OS=Oryza sativa subsp. indica OX=39946 GN=HOX27 PE=2 SV=2)

HSP 1 Score: 191.8 bits (486), Expect = 1.2e-47
Identity = 145/202 (71.78%), Postives = 158/202 (78.22%), Query Frame = 0


Query: 127 DVNRPPALAAGVAMVPAEE-------TEDKSPNSAVTSFQMDFGVRNGGXXXXXXXXXXX 186
           DVNR P++AAG   +  +E           SPN +  SF +D    +G       XXXXX
Sbjct: 92  DVNRAPSVAAGAPGMEDDEEGPGAAPALSSSPNDSGGSFPLDLS-GHGLRGHAEAXXXXX 151

Query: 187 XXXXXXXXXXXXXXXXXXXXXXXXKLRLSKEQSAFLEQSFKQHSTLNPKQKAALAKQLNL 246
           XXXXXXXXXXXXXXXXXXXXXXXX  RLSKEQSAFLE+SFK+HSTLNPKQK ALAKQLNL
Sbjct: 152 XXXXXXXXXXXXXXXXXXXXXXXXXXRLSKEQSAFLEESFKEHSTLNPKQKVALAKQLNL 211

Query: 247 RPRQVEVWFQNRRARTKLKQTEEDCEYLKRWCETLTEENRRLQKELQELRAFKASQPFYS 306
           RPRQVEVWFQNRRARTKLKQTE DCEYLKR CETLTEENRRL KEL ELRA K ++PFY 
Sbjct: 212 RPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLHKELAELRALKTARPFYM 271

Query: 307 HLPATTLTMCPSCERVVATAPA 322
           HLPATTL+MCPSCER VA+ PA
Sbjct: 272 HLPATTLSMCPSCER-VASNPA 291

[Close]

BLAST of Carg01220 vs. Swiss-Prot
Match: sp|Q6YPD0|HOX27_ORYSJ (Homeobox-leucine zipper protein HOX27 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX27 PE=2 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.6e-47
Identity = 145/202 (71.78%), Postives = 157/202 (77.72%), Query Frame = 0


Query: 127 DVNRPPALAAGVAMVPAEE-------TEDKSPNSAVTSFQMDFGVRNGGXXXXXXXXXXX 186
           DVNR P++AAG   +  +E           SPN +  SF +D     G       XXXXX
Sbjct: 92  DVNRAPSVAAGAPGMEDDEEGPGAAPALSSSPNDSGGSFPLDLS-GQGLRGHAEAXXXXX 151

Query: 187 XXXXXXXXXXXXXXXXXXXXXXXXKLRLSKEQSAFLEQSFKQHSTLNPKQKAALAKQLNL 246
           XXXXXXXXXXXXXXXXXXXXXXXX  RLSKEQSAFLE+SFK+HSTLNPKQK ALAKQLNL
Sbjct: 152 XXXXXXXXXXXXXXXXXXXXXXXXXXRLSKEQSAFLEESFKEHSTLNPKQKVALAKQLNL 211

Query: 247 RPRQVEVWFQNRRARTKLKQTEEDCEYLKRWCETLTEENRRLQKELQELRAFKASQPFYS 306
           RPRQVEVWFQNRRARTKLKQTE DCEYLKR CETLTEENRRL KEL ELRA K ++PFY 
Sbjct: 212 RPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLHKELAELRALKTARPFYM 271

Query: 307 HLPATTLTMCPSCERVVATAPA 322
           HLPATTL+MCPSCER VA+ PA
Sbjct: 272 HLPATTLSMCPSCER-VASNPA 291

[Close]

BLAST of Carg01220 vs. TrEMBL
Match: tr|A0A2I4E1H6|A0A2I4E1H6_9ROSI (homeobox-leucine zipper protein HOX11-like OS=Juglans regia OX=51240 GN=LOC108985412 PE=4 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 4.8e-65
Identity = 154/241 (63.90%), Postives = 167/241 (69.29%), Query Frame = 0


Query: 82  DPPVQLDLLPLSPVPRSSHQSSSPLPFSCLSHRLMPELGCTD---KVLDVNRPPALAAGV 141
           DPPVQLDLLP SPVPRS  Q  + L F  L+  L+PE G +D   K LDVNR PA+A   
Sbjct: 70  DPPVQLDLLPFSPVPRS--QPPTQLRFPWLADNLVPEPGPSDGTGKGLDVNRFPAVA--- 129

Query: 142 AMVPAEETED----KSPNSAVTSFQMDFGVRNGGXXXXXXXXXXXXXXXXXXXXXXXXXX 201
             + AEE +D     SPNS V+SFQMDF VRNGG                          
Sbjct: 130 --IAAEEADDGTALSSPNSTVSSFQMDFCVRNGG-----------RTKRDLELETERASD 189

Query: 202 XXXXXXXXXKLRLSKEQSAFLEQSFKQHSTLNPKQKAALAKQLNLRPRQVEVWFQNRRAR 261
                    KLRL+KEQSAFLE+SFK+HSTLNPKQK ALAKQLNLRPRQVEVWFQNRRAR
Sbjct: 190 DDENGSTRKKLRLTKEQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRAR 249

Query: 262 TKLKQTEEDCEYLKRWCETLTEENRRLQKELQELRAFKASQPFYSHLPATTLTMCPSCER 316
           TKLKQTE DCEYLKR CETLT+ENR+LQKELQELRA K SQPFY  LPATTLTMCPSCER
Sbjct: 250 TKLKQTEVDCEYLKRCCETLTQENRKLQKELQELRALKTSQPFYMQLPATTLTMCPSCER 292

[Close]

BLAST of Carg01220 vs. TrEMBL
Match: tr|A0A2I4GYB0|A0A2I4GYB0_9ROSI (homeobox-leucine zipper protein HOX11 isoform X1 OS=Juglans regia OX=51240 GN=LOC109011942 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.8e-64
Identity = 171/324 (52.78%), Postives = 187/324 (57.72%), Query Frame = 0


Query: 1   MELGLRLGDAPNSNNPFGV--RSIPSSSSLMALGFCVXXXXXXXXXXXXXXXXXXXXXXX 60
           MEL L LGDAP    PF    ++   S+S   LGFC+                       
Sbjct: 1   MELALSLGDAP---KPFAFLDKTTKMSNSGTTLGFCM-------------GVGSGFSGRS 60

Query: 61  XXXXXXXXXXXXXXXIPGSG---YGLDPPVQLDLLPLSPVPRSSHQSSSPLPFSCLSHRL 120
                          I G G      DPPVQLDLLP SPVPRS  Q  + L F  L+  L
Sbjct: 61  DEKRDTREIGDRREVIRGEGDKKISSDPPVQLDLLPFSPVPRS--QPPAQLRFPWLTDNL 120

Query: 121 MPELGCTD---KVLDVNRPPALAAGVAMVPAEETED-KSPNSAVTSFQMDFGVRNGGXXX 180
           + E G +D   + LDVNR P     +AM   ++  D  SPNS V+SFQMDF VRNGG   
Sbjct: 121 VSEPGSSDGMGRGLDVNRFP---MAIAMDEVDDGADLSSPNSTVSSFQMDFSVRNGG--- 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLRLSKEQSAFLEQSFKQHSTLNPKQKA 240
                                           KLRLSKEQSAFLE+SFK+HSTLNPKQK 
Sbjct: 181 ----RTKRDLDVETERASSRASDDDENGSTRKKLRLSKEQSAFLEESFKEHSTLNPKQKL 240

Query: 241 ALAKQLNLRPRQVEVWFQNRRARTKLKQTEEDCEYLKRWCETLTEENRRLQKELQELRAF 300
           ALAKQLNLRPRQVEVWFQNRRARTKLKQTE DCEYLKR CETLT+ENRRLQKELQELRA 
Sbjct: 241 ALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTQENRRLQKELQELRAL 296

Query: 301 KASQPFYSHLPATTLTMCPSCERV 316
           K SQPFY  LPATTLTMCPSCERV
Sbjct: 301 KTSQPFYMQLPATTLTMCPSCERV 296

[Close]

BLAST of Carg01220 vs. TrEMBL
Match: tr|F6HLH9|F6HLH9_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_08s0007g06670 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 1.2e-63
Identity = 151/241 (62.66%), Postives = 162/241 (67.22%), Query Frame = 0


Query: 82  DPPVQLDLLPLSPVPRSSHQSSSPLPFSCLSHRLMPELGCTD---KVLDVNRPPALAAGV 141
           DPPVQLDLLP SPVPR  H  SS L F  L+  LM E G +D   + LDVNR P     V
Sbjct: 57  DPPVQLDLLPFSPVPR--HHPSSQLRFPWLADNLMSEPGSSDGSGRALDVNRFP-----V 116

Query: 142 AMVPAEETED----KSPNSAVTSFQMDFGVRNGGXXXXXXXXXXXXXXXXXXXXXXXXXX 201
           A+  AE+ +D     SPNS V+SFQMDF +   G                          
Sbjct: 117 AVAAAEDADDGGALSSPNSTVSSFQMDFSIYRSG---NGGRSKRDLEATVNEVETSRASD 176

Query: 202 XXXXXXXXXKLRLSKEQSAFLEQSFKQHSTLNPKQKAALAKQLNLRPRQVEVWFQNRRAR 261
                    KLRLSKEQSAFLE+SFK+H+TLNPKQK ALAKQLNLRPRQVEVWFQNRRAR
Sbjct: 177 DDENGSTRKKLRLSKEQSAFLEESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRAR 236

Query: 262 TKLKQTEEDCEYLKRWCETLTEENRRLQKELQELRAFKASQPFYSHLPATTLTMCPSCER 316
           TKLKQTE DCEYLKR CETLTEENRRLQKELQELRA K SQPFY  LPATTLTMCPSCER
Sbjct: 237 TKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKTSQPFYMQLPATTLTMCPSCER 287

[Close]

BLAST of Carg01220 vs. TrEMBL
Match: tr|A0A2N9HGR9|A0A2N9HGR9_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS39007 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 3.5e-63
Identity = 152/242 (62.81%), Postives = 163/242 (67.36%), Query Frame = 0


Query: 82  DPPVQLDLLPLSPVPRSSHQSSSPLPFSCLSHRLMPELGCT----DKVLDVNRPPALAAG 141
           DPP+QLDLLP SPVPR+  Q  + L F  L+  L  E G +     + LDVNR P +A  
Sbjct: 64  DPPLQLDLLPFSPVPRT--QQPTQLRFPWLTDNLASEPGSSVDGPGRGLDVNRFPTVATA 123

Query: 142 VAMVPAEETED----KSPNSAVTSFQMDFGVRNGGXXXXXXXXXXXXXXXXXXXXXXXXX 201
                AEET+D     SPNS V+SFQMDF VRNGG                         
Sbjct: 124 -----AEETDDGAALSSPNSTVSSFQMDFCVRNGG-------RNKRDLEVETERASSRAS 183

Query: 202 XXXXXXXXXXKLRLSKEQSAFLEQSFKQHSTLNPKQKAALAKQLNLRPRQVEVWFQNRRA 261
                     KLRLSKEQSAFLE+SFK+HSTLNPKQK ALAKQLNLRPRQVEVWFQNRRA
Sbjct: 184 DDEENGSTRKKLRLSKEQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRA 243

Query: 262 RTKLKQTEEDCEYLKRWCETLTEENRRLQKELQELRAFKASQPFYSHLPATTLTMCPSCE 316
           RTKLKQTE DCEYLKR CETLTEENRRLQKELQELRA K SQPFY  LPATTLTMCPSCE
Sbjct: 244 RTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKTSQPFYMQLPATTLTMCPSCE 291

[Close]

BLAST of Carg01220 vs. TrEMBL
Match: tr|A0A2C9VDD1|A0A2C9VDD1_MANES (Uncharacterized protein (Fragment) OS=Manihot esculenta OX=3983 GN=MANES_08G043900 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 3.5e-63
Identity = 152/254 (59.84%), Postives = 166/254 (65.35%), Query Frame = 0


Query: 77  SGYGLDPPVQLDLLPLSPVPRSSHQSSSPLPFSCLSHRLMPELGCTD---KVLDVNRPPA 136
           +G   DPPVQLDLLP SPVPR    S +P P+  LS  L+ E G TD   +  DVNR   
Sbjct: 60  TGVSSDPPVQLDLLPFSPVPRRLPPSQTPFPW--LSDNLVSEPGSTDGSGRGFDVNR--- 119

Query: 137 LAAGVAMVPAEETED----KSPNSAVTSFQMDFGVRNGGXXXXXXXXXXXXXXXXXXXXX 196
                  + AEE E+     SPNSAV+SFQMDFG+R+                       
Sbjct: 120 -------LSAEEAEEGAAMSSPNSAVSSFQMDFGIRS-------RRYKRDMEAIDAERAS 179

Query: 197 XXXXXXXXXXXXXXKLRLSKEQSAFLEQSFKQHSTLNPKQKAALAKQLNLRPRQVEVWFQ 256
                         KLRLSKEQSAFLE+SFK+H+TLNPKQK ALAKQLNLRPRQVEVWFQ
Sbjct: 180 SRASDDEENGLTRKKLRLSKEQSAFLEESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQ 239

Query: 257 NRRARTKLKQTEEDCEYLKRWCETLTEENRRLQKELQELRAFKASQPFYSHLPATTLTMC 316
           NRRARTKLKQTE DCEYLKR CETLTEENRRLQKELQELRA K SQPFY  LPATTLTMC
Sbjct: 240 NRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKTSQPFYMQLPATTLTMC 294

Query: 317 PSCERVVATAPAAS 324
           PSCERV  T  + S
Sbjct: 300 PSCERVATTNTSPS 294

The following BLAST results are available for this feature:

BLAST of Carg01220 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022930228.1	1.1e-121	93.22	homeobox-leucine zipper protein HOX11-like [Cucurbita moschata]	[more]
XP_022971346.1	5.5e-121	92.17	homeobox-leucine zipper protein HOX11-like [Cucurbita maxima]	[more]
XP_023539558.1	1.6e-120	89.09	homeobox-leucine zipper protein HOX11-like [Cucurbita pepo subsp. pepo]	[more]
XP_022151365.1	3.9e-74	62.43	homeobox-leucine zipper protein HOX11 isoform X1 [Momordica charantia]	[more]
XP_023528249.1	6.6e-74	59.20	homeobox-leucine zipper protein HOX11-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg01220 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G06710.1	2.8e-50	58.55	homeobox from Arabidopsis thaliana	[more]
AT4G37790.1	1.9e-46	81.25	Homeobox-leucine zipper protein family	[more]
AT2G22800.1	3.0e-44	76.79	Homeobox-leucine zipper protein family	[more]
AT3G60390.1	4.3e-43	70.99	homeobox-leucine zipper protein 3	[more]
AT2G44910.1	4.7e-42	76.72	homeobox-leucine zipper protein 4	[more]

BLAST of Carg01220 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P46665\|HAT14_ARATH	5.0e-49	58.55	Homeobox-leucine zipper protein HAT14 OS=Arabidopsis thaliana OX=3702 GN=HAT14 P...	[more]
sp\|A2Z1U1\|HOX11_ORYSI	1.2e-47	85.96	Homeobox-leucine zipper protein HOX11 OS=Oryza sativa subsp. indica OX=39946 GN=...	[more]
sp\|Q67UE2\|HOX11_ORYSJ	1.2e-47	85.96	Homeobox-leucine zipper protein HOX11 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
sp\|A2YW03\|HOX27_ORYSI	1.2e-47	71.78	Homeobox-leucine zipper protein HOX27 OS=Oryza sativa subsp. indica OX=39946 GN=...	[more]
sp\|Q6YPD0\|HOX27_ORYSJ	1.6e-47	71.78	Homeobox-leucine zipper protein HOX27 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]

BLAST of Carg01220 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A2I4E1H6\|A0A2I4E1H6_9ROSI	4.8e-65	63.90	homeobox-leucine zipper protein HOX11-like OS=Juglans regia OX=51240 GN=LOC10898...	[more]
tr\|A0A2I4GYB0\|A0A2I4GYB0_9ROSI	1.8e-64	52.78	homeobox-leucine zipper protein HOX11 isoform X1 OS=Juglans regia OX=51240 GN=LO...	[more]
tr\|F6HLH9\|F6HLH9_VITVI	1.2e-63	62.66	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_08s0007g06670 PE=4 SV=...	[more]
tr\|A0A2N9HGR9\|A0A2N9HGR9_FAGSY	3.5e-63	62.81	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS39007 PE=4 SV=1	[more]
tr\|A0A2C9VDD1\|A0A2C9VDD1_MANES	3.5e-63	59.84	Uncharacterized protein (Fragment) OS=Manihot esculenta OX=3983 GN=MANES_08G0439...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0043565	sequence-specific DNA binding
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR009057	Homeobox-like_sf
IPR017970	Homeobox_CS
IPR003106	Leu_zip_homeo
IPR001356	Homeobox_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg01220-RA	Carg01220-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 271..294
None	No IPR available	GENE3D	G3DSA:1.10.10.60		coord: 206..256 e-value: 1.5E-18 score: 68.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 142..204
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 173..204
None	No IPR available	PANTHER	PTHR24326	FAMILY NOT NAMED	coord: 122..334
None	No IPR available	PANTHER	PTHR24326:SF105	SUBFAMILY NOT NAMED	coord: 122..334
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 200..262 e-value: 3.3E-16 score: 69.8
IPR001356	Homeobox domain	PFAM	PF00046	Homeobox	coord: 202..256 e-value: 2.2E-15 score: 56.1
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 198..258 score: 17.297
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 202..259 e-value: 4.4841E-17 score: 73.0464
IPR003106	Leucine zipper, homeobox-associated	SMART	SM00340	halz	coord: 258..301 e-value: 4.2E-23 score: 92.7
IPR003106	Leucine zipper, homeobox-associated	PFAM	PF02183	HALZ	coord: 258..290 e-value: 2.7E-10 score: 40.2
IPR017970	Homeobox, conserved site	PROSITE	PS00027	HOMEOBOX_1	coord: 233..256
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	SSF46689	Homeodomain-like	coord: 188..259

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg01220	Cla017553	Watermelon (97103) v1	carwmB0148
Carg01220	Csa3G800720	Cucumber (Chinese Long) v2	carcuB0172
Carg01220	MELO3C009614	Melon (DHL92) v3.5.1	carmeB0163
Carg01220	ClCG10G017620	Watermelon (Charleston Gray)	carwcgB0150
Carg01220	CSPI03G36350	Wild cucumber (PI 183967)	carcpiB0178
Carg01220	Cucsa.242570	Cucumber (Gy14) v1	carcgyB0195
Carg01220	CmaCh06G001080	Cucurbita maxima (Rimu)	carcmaB0216
Carg01220	CmaCh14G004100	Cucurbita maxima (Rimu)	carcmaB0202
Carg01220	CmoCh06G001020	Cucurbita moschata (Rifu)	carcmoB0227
Carg01220	CmoCh14G004120	Cucurbita moschata (Rifu)	carcmoB0213
Carg01220	Lsi03G017460	Bottle gourd (USVL1VR-Ls)	carlsiB143
Carg01220	Cp4.1LG03g03980	Cucurbita pepo (Zucchini)	carcpeB0229
Carg01220	Cp4.1LG08g13150	Cucurbita pepo (Zucchini)	carcpeB0233
Carg01220	CsGy3G033810	Cucumber (Gy14) v2	carcgybB0167
Carg01220	MELO3C009614.2	Melon (DHL92) v3.6.1	carmedB0164
Carg01220	CsaV3_3G038700	Cucumber (Chinese Long) v3	carcucB0178
Carg01220	Cla97C10G200510	Watermelon (97103) v2	carwmbB0162
Carg01220	Bhi11G002109	Wax gourd	carwgoB0199

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg01220	Carg03578	Silver-seed gourd	carcarB182

The following block(s) are covering this gene:

None