Carg01206 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg01206
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Rac-like GTP-binding protein
Location	Cucurbita_argyrosperma_scaffold_002 : 1478234 .. 1482796 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGGTTTGTTGGCGAAGATTGGTTTGCTCAACGAACGCTTCATCGGCATTATTTCCCGGCTTGCGCTCTCTCTCTCTCTGTGTGTCTGCAACCATTCCTCCGCCTCCATTGATTCTCAATTCTTCCTTTTGTTACTGTCTTTTCCTCTTTCTCCAAGGGTTAGCCCTCTTCTTCTTATTCTTCTTCTTATTCTTCTTGGTTCTTCTCTCATTTCTCCTCTTTTTCTCCATTTTAGGGTTTTCTTCAGTTGTTTGATTTTCCGTCTCTTCTCTGTCAGATGCGCTATTGACTGTTGTACACCAACTGCCGGAGGAAGGAGGAACTGCACTTTGAACCGCCGCCGTATACTAGTTAGAGGGTTTTCTTTCGTTTTTTGTTGTCCTCAGGTTCACGATCTGAGGCCTCTTTTCCCTATCTGGCTTCTCAACAATGAGCGCTTCACGGTTCATCAAGTGTGTCACCGTTGGCGATGGTGCTGTTGGCAAGACTTGTCTCCTTATTTCATATACCAGCAACACCTTCCCCACTGTCAGTCTCTCTCTCTCTCCTTTTGAAACTTTTTCTGTTGCTTCAATGTCATTCTTTGTTGTGTTCTTTATTCTTCTTTCGTTGTTCGGGAGGGGAGGGAATTGCGCTCATTGATACCACTGAATGTTGAAACTATGTGATCGATTTGATTGTTTTGTGTTTTTGTTTCCTTTGAATTATCGTTACTCTATTTGGTTTCTGTTGCTGGGATCGGGATTGTTATGTAATGTCTTGCCTAGTAATAACGAATGGCTCGGTTAACATGGGATCTATTGGTATTCAAGATTTTATTTTTTACTTTTGCTTCTGCCATTTGGCTTCAATTTATTGTTTTCTTGTTGTAAAGAGTTCGATGTGAAATCCTTGGTCTATGATTGCGTGTCAGAAATTCAATGAGAAGATGGGTATTTTAATATTTTCCATCCATGTCTTTTTTTTTTTTTTTTCTTTATAAAAAGAAAATTTTTGAATTAAGATGATCATTTGCATTATATATATACCTTTTGTTTATTACTTTCATCTATAATCGTGTTTTCCTCTTAGTTATTTCCTGTTCTAAGAAACTTACTATTTATTTATTTATTTTCGAAATGTGCTGGAATGTAGGATTATGTGCCTACAGTTTTCGACAATTTCAGCGCAAATGTGGTTGTGAATGGGAGCACTGTTAACCTAGGGTTATGGGATACAGCTGGTATTTTGATATTCTATCATTTTCTTATCTTTTCAGTGTTCCTACTTTGTTTCTTGGGGCTGAATTTGTTATTCTATGGAACAGGACAGGAGGATTATAACCGACTAAGGCCTTTGAGTTATCGTGGGGCTGATGTTTTTATTTTGGCATTCTCTCTCATTAGCAAGGCCAGCTATGAAAATGTTTCTAAAAAGGTATAATGACGGATGATGATAAGTTTTTCTCCGGTTTTGAACATTTACTAGTTCTTGAAATATAATTACTAATTCTTTATGTCCATATTTTTTGCATGATATCCAGTGGATTCCAGAGTTGAAACATTATGCTCCAGGAGTACCAATTGTTCTTGTTGGAACTAAGCTTGGTAAATTATATTTCTCATGTTCTTCGAATCTTTCATTATTTGATTCTTGTCTGGCTTTCGCTTACTTGACCATGTAGATTCTATATAATGTATGTTTAGGCTATGCCATCATTTCTCATTTTGAAATCTTATGAGAAAAATATTATGTCTGGTTTGAAGAAGCATGCTTTCCTTTAAGTCCGGTGAGTATTAACTTAGTGATGAATGCCTGCTCTCTAATTAGCAATGTCTGTCGATTACTAATAATATATAGTCTTGATTGTTTGTGATATCCCACATCGGTTGGGGAAGAGAGCGAAACACTCTTTATAAGGGTGTGGAAACCTTTCCCTAGCATACGCGCTTTAAAAATCTTGAGGGGAAGCCCGAAAGGGAAAGTCCAAAGAGGACAATATCTGCTAGCGGTGGGCCTAAGCCGTTACAAATGGTATTGGAGCCAGACACTGGGCGATGTGTCAGCGAGGAGGCCGTTCTCTGAAGGGGGTAGACACAAGGCGGTGTGCCAATAAGGACGCTGGGTCTCGAAGGTGGGTGGATTTGGTGGGGTTTCCACATCGATTGAAGAAAGGAACAAGTGCCAGCAAGGACGCTGGGCCCTAAAGGGGGGTGGATTGTGATATCTCACATCGGTTGGAGAGGAGAATGAAACACTCTTTATAAGGGTGTGGAAACCTTTCCCTAGCAAACGCGTTTTAAAAACCTTGAGGGAAAGCCTGAAAGGGAAAACCCAAAGAGGACAATATCTGCTAGCGGTGAGCTTGGACCGTTTCATTGTTTATCTTGTACCAATCCTTCACCTTGTCATAAGAAAATCTCTTGTTACACACTGGCGAGTATGATCATTAATTCAAAAATTATGCATAGAGTCCTCAATCCTCGGTGGTTGCAAAGCTCATATGGAGCAATCTGCACCAAATACTTCGTGAAGCTGAGCTATGAAATAAAATGGGAACCCATGTCCTTGAGGCCTCTAGTTTATCTCAAATATGTAAAAGAATAATTTCCCCCCCTCTCTGTGAGCCTTAAGTGATGGGGGAACATTTGCTCATTTTAAGAATCTGCCCATCTTGTGGACTTACAACTTCTTTGGGTTGTCTACCCTCTAGTGTACTTGTAATTTTTTTGGGTTGGTGTTGGTCGTCTAGTATCTTGGTGTATATTTCAGCATGTTTCGATGCCTGTTACCGGTCAATGTGATTAAAACAACATAAAAACAGCTGGCTCTAGCATGTCGTACACATTTGTTGAAATACTGTCTCTTCTCTACTGAGATATGATTAGGATTCTTCGTTTCCTCTTCTTTTAACAATTTCTGATGTCAAGCTCTCCTCTCCATTTTACTTGAAAGTCTGAAGTAGAAACTTTTTAATGAAAAGAAAAACCACCTTCGGAAGGATACACCTACCTGAGACTTACAAAAATGATTCTTCCTAAAGTACCTTGTGAAGTTGGATTATACGAAACCCTAGGAAGTACAATGTTCTTTTGCTGACTAGATGTTAGTCCCCGGAGTGTCCATGTTATCAAGAATGGCAAATATTTGGAATTGAAATCATATTTAGCACTTCCCTCCTGACATCACCGTCATTTGCATGGTTGAAGTTAATCTGTCGTGTGTTTGGTCTTGTGCGCAAGTAACACAGGAGAGTTCAATTATTGGATATTATTTATTGGCCTGGAGTAAGAGCCTCGTCTTCGCTCATGGCAAAGAAAAAGAAAACTTCACCAACACTTGTAGGCTAGAAGGTGAAGTAGAATTGATCTTGTAGTATTATGATCTTGATAGTTACCTAGTAACTGAACGGTTTCTTGCAAGCGTACACGTACAATTTCTGCTTGATTAGATTGCGATATTCATTTTTTAGGTACATAGTACAGTTGTAAAAGAAATTTGTTACAAGTTAATGGAATTGATCTTGTCAGTTATCTTCTCCAATTCTGTATTGGGATTGATTATGCTGTTTAATGTTGGTAACATGTGGTGCCATCAATGACTGCCCTGGATTAGTTCTCATTGATGTTTATTTTTTACGAAATAGATCTTCGAGATGATGAACAGTTCTTTATTGACCATCCCGGTGCAGTTCCCATTTCAGAAGCCCAGGTAAATGTTTTATCCTAGATGATTTTACATTTTCAAGGTGTTTTTGCTTTTTTGGTATAATTTGGATTTCTTGTCAATGTCAAGGGAGAGGAGCTCAGGAAGCTGATCGGTGCTCCTGCGTACATCGAGTGCAGTTCAAAAACTCAGCAGGTATTTGTATTCTTATGTGAGTGATCTAGTGTTTTGGCATTGCAGTATGGATTATTGATTTGGTTTTGAACGTGTGATGTAACCACAGAATGTGAAGGGAGTTTTTGATGCCGCAATTAGGGTTGTACTTCAACCTCCAAAGCAGAAGAAAAAGAAGGGCAAATCTAAAGCGTGCTCGATATTATGAGCAGAACTCTAGTTGTGAAAACATGGCGTCACCCTTTGTCTGCCTGTATTCTCTCATCCTTTTTTTTCTTTCTTTCCTTTTGATTATGTAGTGGCCTGAAAGTCTGATTTATTTCTGTCCCGCAATACTCGCAATCTCTGTGAAGCATCATCGGGTAGTTTATTACTGCATTCCTGAAAATCACGTGGTATTGAATGAAAAGACATGTCATGTTCCTCACCTTATTTTAGCCTTTGGTTTGAATTGTGTACTAATAGAGATTTGGATACTGGAACACGCTACTACAAGGGTTAGGAAGCAACAATTTGTTTTTGGTGGAAGGGCACTAAGAGTTGTATTGTGATGTGCTTGAAAAGTGTATATGTATGTATGGAGGGAAGTAGGGGAAGGATTTGTAATGCAAAGTGTGTGCTTCAAAGAGAAACATTGATGGATTCTTTTATATATAAATTTGCATTCTGACTTGACTTGTGGTTTTGTTTGTAGTATGGAGAGCATAAGTAGTTCTTTTTTTGGATCTGTTTTACTTCCAATCA

mRNA sequence

AAGGTTTGTTGGCGAAGATTGGTTTGCTCAACGAACGCTTCATCGGCATTATTTCCCGGCTTGCGCTCTCTCTCTCTCTGTGTGTCTGCAACCATTCCTCCGCCTCCATTGATTCTCAATTCTTCCTTTTGTTACTGTCTTTTCCTCTTTCTCCAAGGGGTTTTCTTCAGTTGTTTGATTTTCCGTCTCTTCTCTGTCAGATGCGCTATTGACTGTTGTACACCAACTGCCGGAGGAAGGAGGAACTGCACTTTGAACCGCCGCCGTATACTAGTTAGAGGGTTTTCTTTCGTTTTTTGTTGTCCTCAGGTTCACGATCTGAGGCCTCTTTTCCCTATCTGGCTTCTCAACAATGAGCGCTTCACGGTTCATCAAGTGTGTCACCGTTGGCGATGGTGCTGTTGGCAAGACTTGTCTCCTTATTTCATATACCAGCAACACCTTCCCCACTGATTATGTGCCTACAGTTTTCGACAATTTCAGCGCAAATGTGGTTGTGAATGGGAGCACTGTTAACCTAGGGTTATGGGATACAGCTGGACAGGAGGATTATAACCGACTAAGGCCTTTGAGTTATCGTGGGGCTGATGTTTTTATTTTGGCATTCTCTCTCATTAGCAAGGCCAGCTATGAAAATGTTTCTAAAAAGTGGATTCCAGAGTTGAAACATTATGCTCCAGGAGTACCAATTGTTCTTGTTGGAACTAAGCTTGATCTTCGAGATGATGAACAGTTCTTTATTGACCATCCCGGTGCAGTTCCCATTTCAGAAGCCCAGGGAGAGGAGCTCAGGAAGCTGATCGGTGCTCCTGCGTACATCGAGTGCAGTTCAAAAACTCAGCAGAATGTGAAGGGAGTTTTTGATGCCGCAATTAGGGTTGTACTTCAACCTCCAAAGCAGAAGAAAAAGAAGGGCAAATCTAAAGCGTGCTCGATATTATGAGCAGAACTCTAGTTGTGAAAACATGGCGTCACCCTTTGTCTGCCTGTATTCTCTCATCCTTTTTTTTCTTTCTTTCCTTTTGATTATGTAGTGGCCTGAAAGTCTGATTTATTTCTGTCCCGCAATACTCGCAATCTCTGTGAAGCATCATCGGGTAGTTTATTACTGCATTCCTGAAAATCACGTGGTATTGAATGAAAAGACATGTCATGTTCCTCACCTTATTTTAGCCTTTGGTTTGAATTGTGTACTAATAGAGATTTGGATACTGGAACACGCTACTACAAGGGTTAGGAAGCAACAATTTGTTTTTGGTGGAAGGGCACTAAGAGTTGTATTGTGATGTGCTTGAAAAGTGTATATGTATGTATGGAGGGAAGTAGGGGAAGGATTTGTAATGCAAAGTGTGTGCTTCAAAGAGAAACATTGATGGATTCTTTTATATATAAATTTGCATTCTGACTTGACTTGTGGTTTTGTTTGTAGTATGGAGAGCATAAGTAGTTCTTTTTTTGGATCTGTTTTACTTCCAATCA

Coding sequence (CDS)

ATGAGCGCTTCACGGTTCATCAAGTGTGTCACCGTTGGCGATGGTGCTGTTGGCAAGACTTGTCTCCTTATTTCATATACCAGCAACACCTTCCCCACTGATTATGTGCCTACAGTTTTCGACAATTTCAGCGCAAATGTGGTTGTGAATGGGAGCACTGTTAACCTAGGGTTATGGGATACAGCTGGACAGGAGGATTATAACCGACTAAGGCCTTTGAGTTATCGTGGGGCTGATGTTTTTATTTTGGCATTCTCTCTCATTAGCAAGGCCAGCTATGAAAATGTTTCTAAAAAGTGGATTCCAGAGTTGAAACATTATGCTCCAGGAGTACCAATTGTTCTTGTTGGAACTAAGCTTGATCTTCGAGATGATGAACAGTTCTTTATTGACCATCCCGGTGCAGTTCCCATTTCAGAAGCCCAGGGAGAGGAGCTCAGGAAGCTGATCGGTGCTCCTGCGTACATCGAGTGCAGTTCAAAAACTCAGCAGAATGTGAAGGGAGTTTTTGATGCCGCAATTAGGGTTGTACTTCAACCTCCAAAGCAGAAGAAAAAGAAGGGCAAATCTAAAGCGTGCTCGATATTATGA

Protein sequence

MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKLDLRDDEQFFIDHPGAVPISEAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQPPKQKKKKGKSKACSIL

Homology

[Close]

BLAST of Carg01206 vs. NCBI nr
Match: XP_022939989.1 (rac-like GTP-binding protein ARAC1 [Cucurbita moschata] >XP_022939997.1 rac-like GTP-binding protein ARAC1 [Cucurbita moschata] >XP_022971486.1 rac-like GTP-binding protein ARAC1 [Cucurbita maxima] >XP_022971488.1 rac-like GTP-binding protein ARAC1 [Cucurbita maxima] >XP_023538999.1 rac-like GTP-binding protein ARAC1 [Cucurbita pepo subsp. pepo] >XP_023539000.1 rac-like GTP-binding protein ARAC1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 396.7 bits (1018), Expect = 4.4e-107
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 121 DLRDDEQFFIDHPGAVPISEAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQP 180
           DLRDDEQFFIDHPGAVPISEAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQP
Sbjct: 121 DLRDDEQFFIDHPGAVPISEAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQP 180

Query: 181 PKQKKKKGKSKACSIL 197
           PKQKKKKGKSKACSIL
Sbjct: 181 PKQKKKKGKSKACSIL 196

[Close]

BLAST of Carg01206 vs. NCBI nr
Match: XP_024181656.1 (rac-like GTP-binding protein ARAC1 [Rosa chinensis] >PRQ47373.1 putative small GTPase superfamily, P-loop containing nucleoside triphosphate hydrolase [Rosa chinensis])

HSP 1 Score: 385.6 bits (989), Expect = 1.0e-103
Identity = 191/197 (96.95%), Postives = 195/197 (98.98%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPI+LVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKL 120

Query: 121 DLRDDEQFFIDHPGAVPISEAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQP 180
           DLRDD+QFFIDHPGAVPI+ AQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQP
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQP 180

Query: 181 PKQKKKKGKS-KACSIL 197
           PKQKKKKGK+ KACSIL
Sbjct: 181 PKQKKKKGKAQKACSIL 197

[Close]

BLAST of Carg01206 vs. NCBI nr
Match: XP_007202540.1 (rac-like GTP-binding protein ARAC1 [Prunus persica] >XP_008242051.1 PREDICTED: rac-like GTP-binding protein ARAC1 [Prunus mume] >XP_008337990.1 PREDICTED: rac-like GTP-binding protein ARAC1 [Malus domestica] >XP_009363468.1 PREDICTED: rac-like GTP-binding protein ARAC1 [Pyrus x bretschneideri] >XP_011462150.1 PREDICTED: rac-like GTP-binding protein ARAC1 [Fragaria vesca subsp. vesca] >XP_021816302.1 rac-like GTP-binding protein ARAC1 [Prunus avium] >ONH97138.1 hypothetical protein PRUPE_7G171700 [Prunus persica] >PQM32958.1 rac-like GTP-binding protein ARAC1 [Prunus yedoensis var. nudiflora] >PQQ04741.1 rac-like GTP-binding protein ARAC1 [Prunus yedoensis var. nudiflora])

HSP 1 Score: 385.2 bits (988), Expect = 1.3e-103
Identity = 191/197 (96.95%), Postives = 194/197 (98.48%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPI+LVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKL 120

Query: 121 DLRDDEQFFIDHPGAVPISEAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQP 180
           DLRDD+QFFIDHPGAVPI+ AQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQP
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQP 180

Query: 181 PKQKKKKGK-SKACSIL 197
           PKQKKKKGK  KACSIL
Sbjct: 181 PKQKKKKGKGQKACSIL 197

[Close]

BLAST of Carg01206 vs. NCBI nr
Match: XP_004146153.1 (PREDICTED: rac-like GTP-binding protein ARAC1 [Cucumis sativus] >XP_008448529.1 PREDICTED: rac-like GTP-binding protein ARAC1 [Cucumis melo] >XP_008448530.1 PREDICTED: rac-like GTP-binding protein ARAC1 [Cucumis melo] >XP_011650280.1 PREDICTED: rac-like GTP-binding protein ARAC1 [Cucumis sativus] >KGN55647.1 hypothetical protein Csa_3G002670 [Cucumis sativus])

HSP 1 Score: 384.8 bits (987), Expect = 1.7e-103
Identity = 192/197 (97.46%), Postives = 194/197 (98.48%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 121 DLRDDEQFFIDHPGAVPISEAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQP 180
           DLRDD+QFFIDHPGAVPIS AQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQP
Sbjct: 121 DLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQP 180

Query: 181 PKQKKKKGKS-KACSIL 197
           PKQKKKK K+ KACSIL
Sbjct: 181 PKQKKKKSKAQKACSIL 197

[Close]

BLAST of Carg01206 vs. NCBI nr
Match: XP_008393868.1 (PREDICTED: rac-like GTP-binding protein ARAC1 [Malus domestica] >XP_009379341.1 PREDICTED: rac-like GTP-binding protein ARAC1 [Pyrus x bretschneideri])

HSP 1 Score: 383.6 bits (984), Expect = 3.9e-103
Identity = 190/197 (96.45%), Postives = 194/197 (98.48%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPI+LVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKL 120

Query: 121 DLRDDEQFFIDHPGAVPISEAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQP 180
           DLRDD+QFFIDHPGAVPI+ AQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQP
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQP 180

Query: 181 PKQKKKK-GKSKACSIL 197
           PKQKKK+ GK KACSIL
Sbjct: 181 PKQKKKEGGKGKACSIL 197

[Close]

BLAST of Carg01206 vs. TAIR10
Match: AT2G17800.1 (Arabidopsis RAC-like 1)

HSP 1 Score: 380.2 bits (975), Expect = 7.8e-106
Identity = 188/197 (95.43%), Postives = 194/197 (98.48%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNG+TVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 121 DLRDDEQFFIDHPGAVPISEAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQP 180
           DLRDD+QFFIDHPGAVPI+ AQGEEL+KLIGAPAYIECSSKTQ+NVKGVFDAAIRVVLQP
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELKKLIGAPAYIECSSKTQENVKGVFDAAIRVVLQP 180

Query: 181 PKQKKKKGKS-KACSIL 197
           PKQKKKK K+ KACSIL
Sbjct: 181 PKQKKKKSKAQKACSIL 197

[Close]

BLAST of Carg01206 vs. TAIR10
Match: AT4G35950.1 (RAC-like 6)

HSP 1 Score: 377.1 bits (967), Expect = 6.6e-105
Identity = 186/197 (94.42%), Postives = 193/197 (97.97%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNG+TVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 121 DLRDDEQFFIDHPGAVPISEAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQP 180
           DLRDD+QFFIDHPGAVPI+  QGEEL+KLIGAPAYIECSSK+Q+NVKGVFDAAIRVVLQP
Sbjct: 121 DLRDDKQFFIDHPGAVPITTVQGEELKKLIGAPAYIECSSKSQENVKGVFDAAIRVVLQP 180

Query: 181 PKQKKKKGKS-KACSIL 197
           PKQKKKK K+ KACSIL
Sbjct: 181 PKQKKKKNKAQKACSIL 197

[Close]

BLAST of Carg01206 vs. TAIR10
Match: AT3G51300.1 (RHO-related protein from plants 1)

HSP 1 Score: 375.9 bits (964), Expect = 1.5e-104
Identity = 186/197 (94.42%), Postives = 191/197 (96.95%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60
           MSASRF+KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD
Sbjct: 1   MSASRFVKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 121 DLRDDEQFFIDHPGAVPISEAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQP 180
           DLRDD+QFFIDHPGAVPI+ AQGEELRK IGAP YIECSSKTQ+NVK VFDAAIRVVLQP
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKQIGAPTYIECSSKTQENVKAVFDAAIRVVLQP 180

Query: 181 PKQKKKKGKS-KACSIL 197
           PKQKKKK K+ KACSIL
Sbjct: 181 PKQKKKKSKAQKACSIL 197

[Close]

BLAST of Carg01206 vs. TAIR10
Match: AT1G75840.1 (RAC-like GTP binding protein 5)

HSP 1 Score: 348.2 bits (892), Expect = 3.3e-96
Identity = 166/181 (91.71%), Postives = 177/181 (97.79%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+G+TVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENV+KKWIPEL+HYAPGVPI+LVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKL 120

Query: 121 DLRDDEQFFIDHPGAVPISEAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQP 180
           DLRDD+QFFIDHPGAVPI+  QGEEL+KLIG+P YIECSSKTQQNVK VFDAAI+VVLQP
Sbjct: 121 DLRDDKQFFIDHPGAVPITTNQGEELKKLIGSPIYIECSSKTQQNVKAVFDAAIKVVLQP 180

Query: 181 P 182
           P
Sbjct: 181 P 181

[Close]

BLAST of Carg01206 vs. TAIR10
Match: AT4G35020.1 (RAC-like 3)

HSP 1 Score: 346.7 bits (888), Expect = 9.6e-96
Identity = 168/198 (84.85%), Postives = 182/198 (91.92%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANV+V+G+T+NLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVIVDGNTINLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVF+LAFSL+SKASYENVSKKW+PEL+HYAPGVPI+LVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLVSKASYENVSKKWVPELRHYAPGVPIILVGTKL 120

Query: 121 DLRDDEQFFIDHPGAVPISEAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQP 180
           DLRDD+QFF +HPGAVPIS AQGEEL+KLIGAPAYIECS+KTQQNVK VFDAAI+VVLQP
Sbjct: 121 DLRDDKQFFAEHPGAVPISTAQGEELKKLIGAPAYIECSAKTQQNVKAVFDAAIKVVLQP 180

Query: 181 --PKQKKKKGKSKACSIL 197
                       K CSIL
Sbjct: 181 XXXXXXXXXXXQKGCSIL 198

[Close]

BLAST of Carg01206 vs. Swiss-Prot
Match: sp|Q38902|RAC1_ARATH (Rac-like GTP-binding protein ARAC1 OS=Arabidopsis thaliana OX=3702 GN=ARAC1 PE=1 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 1.4e-104
Identity = 188/197 (95.43%), Postives = 194/197 (98.48%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNG+TVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 121 DLRDDEQFFIDHPGAVPISEAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQP 180
           DLRDD+QFFIDHPGAVPI+ AQGEEL+KLIGAPAYIECSSKTQ+NVKGVFDAAIRVVLQP
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELKKLIGAPAYIECSSKTQENVKGVFDAAIRVVLQP 180

Query: 181 PKQKKKKGKS-KACSIL 197
           PKQKKKK K+ KACSIL
Sbjct: 181 PKQKKKKSKAQKACSIL 197

[Close]

BLAST of Carg01206 vs. Swiss-Prot
Match: sp|Q9SBJ6|RAC6_ARATH (Rac-like GTP-binding protein ARAC6 OS=Arabidopsis thaliana OX=3702 GN=ARAC6 PE=1 SV=2)

HSP 1 Score: 377.1 bits (967), Expect = 1.2e-103
Identity = 186/197 (94.42%), Postives = 193/197 (97.97%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNG+TVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 121 DLRDDEQFFIDHPGAVPISEAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQP 180
           DLRDD+QFFIDHPGAVPI+  QGEEL+KLIGAPAYIECSSK+Q+NVKGVFDAAIRVVLQP
Sbjct: 121 DLRDDKQFFIDHPGAVPITTVQGEELKKLIGAPAYIECSSKSQENVKGVFDAAIRVVLQP 180

Query: 181 PKQKKKKGKS-KACSIL 197
           PKQKKKK K+ KACSIL
Sbjct: 181 PKQKKKKNKAQKACSIL 197

[Close]

BLAST of Carg01206 vs. Swiss-Prot
Match: sp|Q39435|RAC1_BETVU (Rac-like GTP-binding protein RHO1 OS=Beta vulgaris OX=161934 GN=RHO1 PE=2 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 1.6e-103
Identity = 187/197 (94.92%), Postives = 192/197 (97.46%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNG+TVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 121 DLRDDEQFFIDHPGAVPISEAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQP 180
           DLRDD+QFFIDHPGAVPI+ AQGEELRKLIGAPAYIECSSKTQQNVK VFDAAI+VVLQP
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIKVVLQP 180

Query: 181 PKQKKKKGKS-KACSIL 197
           PK KKKK K+ KACSIL
Sbjct: 181 PKTKKKKSKAQKACSIL 197

[Close]

BLAST of Carg01206 vs. Swiss-Prot
Match: sp|Q35638|RHO1_PEA (Rac-like GTP-binding protein RHO1 OS=Pisum sativum OX=3888 GN=RHO1 PE=2 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 1.6e-103
Identity = 186/197 (94.42%), Postives = 192/197 (97.46%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPI+LVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKL 120

Query: 121 DLRDDEQFFIDHPGAVPISEAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQP 180
           DLRDD+QFF+DHPGAVPI+ AQGEELRKLI APAYIECSSK+QQNVK VFDAAIRVVLQP
Sbjct: 121 DLRDDKQFFVDHPGAVPITTAQGEELRKLINAPAYIECSSKSQQNVKAVFDAAIRVVLQP 180

Query: 181 PKQKKKKGKS-KACSIL 197
           PKQKKKK K+ KACSIL
Sbjct: 181 PKQKKKKSKAQKACSIL 197

[Close]

BLAST of Carg01206 vs. Swiss-Prot
Match: sp|P92978|RAC11_ARATH (Rac-like GTP-binding protein ARAC11 OS=Arabidopsis thaliana OX=3702 GN=ARAC11 PE=1 SV=2)

HSP 1 Score: 375.9 bits (964), Expect = 2.7e-103
Identity = 186/197 (94.42%), Postives = 191/197 (96.95%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60
           MSASRF+KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD
Sbjct: 1   MSASRFVKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 121 DLRDDEQFFIDHPGAVPISEAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQP 180
           DLRDD+QFFIDHPGAVPI+ AQGEELRK IGAP YIECSSKTQ+NVK VFDAAIRVVLQP
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKQIGAPTYIECSSKTQENVKAVFDAAIRVVLQP 180

Query: 181 PKQKKKKGKS-KACSIL 197
           PKQKKKK K+ KACSIL
Sbjct: 181 PKQKKKKSKAQKACSIL 197

[Close]

BLAST of Carg01206 vs. TrEMBL
Match: tr|A0A2P6RLU2|A0A2P6RLU2_ROSCH (Putative small GTPase superfamily, P-loop containing nucleoside triphosphate hydrolase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0098991 PE=4 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 6.8e-104
Identity = 191/197 (96.95%), Postives = 195/197 (98.98%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPI+LVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKL 120

Query: 121 DLRDDEQFFIDHPGAVPISEAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQP 180
           DLRDD+QFFIDHPGAVPI+ AQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQP
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQP 180

Query: 181 PKQKKKKGKS-KACSIL 197
           PKQKKKKGK+ KACSIL
Sbjct: 181 PKQKKKKGKAQKACSIL 197

[Close]

BLAST of Carg01206 vs. TrEMBL
Match: tr|M5VR21|M5VR21_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G171700 PE=4 SV=1)

HSP 1 Score: 385.2 bits (988), Expect = 8.9e-104
Identity = 191/197 (96.95%), Postives = 194/197 (98.48%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPI+LVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKL 120

Query: 121 DLRDDEQFFIDHPGAVPISEAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQP 180
           DLRDD+QFFIDHPGAVPI+ AQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQP
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQP 180

Query: 181 PKQKKKKGK-SKACSIL 197
           PKQKKKKGK  KACSIL
Sbjct: 181 PKQKKKKGKGQKACSIL 197

[Close]

BLAST of Carg01206 vs. TrEMBL
Match: tr|A0A1S3BKI5|A0A1S3BKI5_CUCME (rac-like GTP-binding protein ARAC1 OS=Cucumis melo OX=3656 GN=LOC103490679 PE=4 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 1.2e-103
Identity = 192/197 (97.46%), Postives = 194/197 (98.48%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 121 DLRDDEQFFIDHPGAVPISEAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQP 180
           DLRDD+QFFIDHPGAVPIS AQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQP
Sbjct: 121 DLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQP 180

Query: 181 PKQKKKKGKS-KACSIL 197
           PKQKKKK K+ KACSIL
Sbjct: 181 PKQKKKKSKAQKACSIL 197

[Close]

BLAST of Carg01206 vs. TrEMBL
Match: tr|A0A0A0L4X0|A0A0A0L4X0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G002670 PE=4 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 1.2e-103
Identity = 192/197 (97.46%), Postives = 194/197 (98.48%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 121 DLRDDEQFFIDHPGAVPISEAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQP 180
           DLRDD+QFFIDHPGAVPIS AQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQP
Sbjct: 121 DLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQP 180

Query: 181 PKQKKKKGKS-KACSIL 197
           PKQKKKK K+ KACSIL
Sbjct: 181 PKQKKKKSKAQKACSIL 197

[Close]

BLAST of Carg01206 vs. TrEMBL
Match: tr|A0A2P5EV20|A0A2P5EV20_9ROSA (Small GTP-binding domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_149100 PE=4 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 3.4e-103
Identity = 190/197 (96.45%), Postives = 194/197 (98.48%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPI+LVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKL 120

Query: 121 DLRDDEQFFIDHPGAVPISEAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQP 180
           DLRDD+QFFIDHPGAVPI+ AQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQP
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIRVVLQP 180

Query: 181 PKQKKKKGKS-KACSIL 197
           PKQKKKK K+ KACSIL
Sbjct: 181 PKQKKKKSKAQKACSIL 197

The following BLAST results are available for this feature:

BLAST of Carg01206 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022939989.1	4.4e-107	100.00	rac-like GTP-binding protein ARAC1 [Cucurbita moschata] >XP_022939997.1 rac-like...	[more]
XP_024181656.1	1.0e-103	96.95	rac-like GTP-binding protein ARAC1 [Rosa chinensis] >PRQ47373.1 putative small G...	[more]
XP_007202540.1	1.3e-103	96.95	rac-like GTP-binding protein ARAC1 [Prunus persica] >XP_008242051.1 PREDICTED: r...	[more]
XP_004146153.1	1.7e-103	97.46	PREDICTED: rac-like GTP-binding protein ARAC1 [Cucumis sativus] >XP_008448529.1 ...	[more]
XP_008393868.1	3.9e-103	96.45	PREDICTED: rac-like GTP-binding protein ARAC1 [Malus domestica] >XP_009379341.1 ...	[more]

BLAST of Carg01206 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G17800.1	7.8e-106	95.43	Arabidopsis RAC-like 1	[more]
AT4G35950.1	6.6e-105	94.42	RAC-like 6	[more]
AT3G51300.1	1.5e-104	94.42	RHO-related protein from plants 1	[more]
AT1G75840.1	3.3e-96	91.71	RAC-like GTP binding protein 5	[more]
AT4G35020.1	9.6e-96	84.85	RAC-like 3	[more]

BLAST of Carg01206 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q38902\|RAC1_ARATH	1.4e-104	95.43	Rac-like GTP-binding protein ARAC1 OS=Arabidopsis thaliana OX=3702 GN=ARAC1 PE=1...	[more]
sp\|Q9SBJ6\|RAC6_ARATH	1.2e-103	94.42	Rac-like GTP-binding protein ARAC6 OS=Arabidopsis thaliana OX=3702 GN=ARAC6 PE=1...	[more]
sp\|Q39435\|RAC1_BETVU	1.6e-103	94.92	Rac-like GTP-binding protein RHO1 OS=Beta vulgaris OX=161934 GN=RHO1 PE=2 SV=1	[more]
sp\|Q35638\|RHO1_PEA	1.6e-103	94.42	Rac-like GTP-binding protein RHO1 OS=Pisum sativum OX=3888 GN=RHO1 PE=2 SV=1	[more]
sp\|P92978\|RAC11_ARATH	2.7e-103	94.42	Rac-like GTP-binding protein ARAC11 OS=Arabidopsis thaliana OX=3702 GN=ARAC11 PE...	[more]

BLAST of Carg01206 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A2P6RLU2\|A0A2P6RLU2_ROSCH	6.8e-104	96.95	Putative small GTPase superfamily, P-loop containing nucleoside triphosphate hyd...	[more]
tr\|M5VR21\|M5VR21_PRUPE	8.9e-104	96.95	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G171700 PE=4 SV=1	[more]
tr\|A0A1S3BKI5\|A0A1S3BKI5_CUCME	1.2e-103	97.46	rac-like GTP-binding protein ARAC1 OS=Cucumis melo OX=3656 GN=LOC103490679 PE=4 ...	[more]
tr\|A0A0A0L4X0\|A0A0A0L4X0_CUCSA	1.2e-103	97.46	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G002670 PE=4 SV=1	[more]
tr\|A0A2P5EV20\|A0A2P5EV20_9ROSA	3.4e-103	96.45	Small GTP-binding domain containing protein OS=Trema orientalis OX=63057 GN=TorR...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular

Vocabulary: **Biological Process**
Term	Definition
GO:0007264	small GTPase mediated signal transduction

Vocabulary: **Molecular Function**
Term	Definition
GO:0003924	GTPase activity
GO:0005525	GTP binding

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR003578	Small_GTPase_Rho
IPR001806	Small_GTPase
IPR005225	Small_GTP-bd_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007264	small GTPase mediated signal transduction
cellular_component	GO:0005622	intracellular
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg01206-RA	Carg01206-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 155..177 score: 35.23 coord: 30..46 score: 32.14 coord: 7..28 score: 47.97 coord: 47..69 score: 47.16 coord: 109..122 score: 52.36
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 9..180 e-value: 1.9E-112 score: 389.6
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 7..180 e-value: 2.6E-26 score: 103.4
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 4..180 e-value: 8.8E-22 score: 88.4
None	No IPR available	GENE3D	G3DSA:3.40.50.300		coord: 3..183 e-value: 2.1E-65 score: 221.3
None	No IPR available	PANTHER	PTHR24072:SF179	RAC-LIKE GTP-BINDING PROTEIN ARAC1-RELATED	coord: 4..196
None	No IPR available	PANTHER	PTHR24072	RHO FAMILY GTPASE	coord: 4..196
None	No IPR available	CDD	cd04133	Rop_like	coord: 6..178 e-value: 8.30918E-134 score: 374.568
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 7..171 e-value: 3.9E-36 score: 122.3
IPR001806	Small GTPase superfamily	PFAM	PF00071	Ras	coord: 8..178 e-value: 3.2E-51 score: 173.1
IPR003578	Small GTPase superfamily, Rho type	PROSITE	PS51420	RHO	coord: 1..177 score: 24.77
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 6..178

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg01206	Cla008911	Watermelon (97103) v1	carwmB0149
Carg01206	Csa3G002670	Cucumber (Chinese Long) v2	carcuB0173
Carg01206	MELO3C013754	Melon (DHL92) v3.5.1	carmeB0165
Carg01206	ClCG10G000580	Watermelon (Charleston Gray)	carwcgB0148
Carg01206	CSPI03G00620	Wild cucumber (PI 183967)	carcpiB0179
Carg01206	Cucsa.322750	Cucumber (Gy14) v1	carcgyB0197
Carg01206	CmaCh06G001240	Cucurbita maxima (Rimu)	carcmaB0216
Carg01206	CmaCh16G012460	Cucurbita maxima (Rimu)	carcmaB0205
Carg01206	CmoCh06G001150	Cucurbita moschata (Rifu)	carcmoB0227
Carg01206	CmoCh16G012940	Cucurbita moschata (Rifu)	carcmoB0216
Carg01206	Lsi07G010900	Bottle gourd (USVL1VR-Ls)	carlsiB146
Carg01206	Cp4.1LG14g10350	Cucurbita pepo (Zucchini)	carcpeB0223
Carg01206	Cp4.1LG08g13220	Cucurbita pepo (Zucchini)	carcpeB0233
Carg01206	CsGy3G000580	Cucumber (Gy14) v2	carcgybB0168
Carg01206	MELO3C013754.2	Melon (DHL92) v3.6.1	carmedB0166
Carg01206	CsaV3_3G000660	Cucumber (Chinese Long) v3	carcucB0179
Carg01206	Cla97C10G185150	Watermelon (97103) v2	carwmbB0160
Carg01206	Bhi11G000256	Wax gourd	carwgoB0198

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg01206	Carg19465	Silver-seed gourd	carcarB191

The following block(s) are covering this gene:


Gene	Organism	Block
Carg01206	Silver-seed gourd	carcarB189