Carg01197 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg01197
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	RING/U-box superfamily protein
Location	Cucurbita_argyrosperma_scaffold_002 : 1439396 .. 1441276 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCCTTCTTAAGATCCAAGTTTTTTTGCCCTTTCTTTGAATTCCCCAATTCTTGTTTCTTTTCGATTCTCCATTTTCGACCAACCTTTTTGATTTCCATGGATTTCATAGCCAATCCTTTTCGGCTTTCTTCTTCCTCCTCGCCTTCGTTTGGGAATCTCTTTGACAGAGTTCGAGAAATTTGCTGCTATGCGGTTTATGCGATTCTTGGCAACATTTTGTCTGCGATCTTCACTTTCTTCTTCGCCCTAGGTTTGTTTGTTTGTTTGTTTCTAATTGATTTTCTGCAGTTCTTGGGATCATTTCCATGTTTGTGATTCTTCCTCATGATAACCTTTCGTACGGAAACTAATTTGAGAATTTGATTTGCCGAGAGGGCTTTCTTAAGATTATTTGGGTTTGAAGGAGATGAAATTGATCTTTGTTTCTTTTGGCAGTGGGGACTTTGCTTGGAGCCATGACTGGAGCATTAATTGGCCAAGAAACAGAGAGTGGGTTTGTTAGAGGAGCTGCTGTTGGGGCAATTTCTGGTGCTGTTTTTTCAATTGAAGTCTTTGAATCTTCTTTGGTTCTTTGGCAATCAGATGAATCAGGGATAGGTTGTCTTCTTTATCTGGTGAGCAAACTTTTTATCCAAATCTTTTGATGATTTGAACCCTCATACGAATCTAAATCTTTTTAATCCTTATTCATATTTTTGGCTCTGTTCTTGATAATCCAACATCGTTTTGTCCTCAACTCTGTATAGATTGATGTCATTGCAAGCCTCCTCAGTGGACGACTAGTTCGAGAACGGATCGGTCCAGCGATATTGAGCGCAGTTCAAAGTCAGGTAGCTTTGCAATGCCATTGATTGTGGCTGGTGAATTGTATAGTTGTATAGCTTCATGTAAAATGATGAAACTCATGTTTTGGTTTCGATGTGCATCAGATGGGTGCTGCAGAGACGAGCTTTGACGACATCTCGAACATCTTCGACACCGGCAGCTCGAAAGGACTGCCTGGGGACCTGGTTGAGAAAATTCCCAAGATCATGGTGTCTAAGAACAACAGTGTAGATGCTTATGGAGAAAAAGTCTGTTGTTCCGTTTGCCTTCAGGTTAGGCTCTAACTTTTATGGATCTCTCTCGTACGAACACAAATTTCTGTTGTTGAAATGGCTCTGATTTTCCCAGGACTTTCAGCTTGGAGAGACTGTAAGAAGCTTACCATATTGTCATCACATGTTCCATTTGCCCTGCATTGATAAATGGCTTATTACTCATGGTTCTTGCCCTTTATGCAGAAGGGATCTGTAATATTTTTCCACTCACCACTGTGTTAACCTTGCCCTTGTAAATTACAAAGAGAAAATTTCCTTATTTTCGGGTTAGATCATTGATTTAGTAGTTCGATATAGAGGCGTCAGACTCGGAACATACTGTGACGATCGATCCTCACCAATGTATAAAATTTTTGAGTAATTATACCCTTATATGCTCTTGTGAATAAACCATATTCCTTCTTTTTTTTTTCCTTGCTGATCAATTATGCTATGAGTTTTGGTTGCTTCTCATTTTTTTGCTGAAAGATATAGTGATAGCCTTCTTTAACAACCTTTAAGATTCAGCCATTGCTTTGTTCATCTTTAAACAGTCACTCAATCATTTTGTGAGATCCCACATCGGTTGGAGAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGTAGACGTGTTTTAAAAACCTTGAGGGAAAATCCAAAGAGAACAATATCTCTAGTGGTGGGCTTTGACTGTTACAAATGGTATCAGAGTCAGACATCGGGCAATGTGCTAGTGAGGAGGCTGAGTCAGTGTGTCAGCAAGGACGTTGTGCTCCAAAAGAGGGT

mRNA sequence

TCTCCTTCTTAAGATCCAAGTTTTTTTGCCCTTTCTTTGAATTCCCCAATTCTTGTTTCTTTTCGATTCTCCATTTTCGACCAACCTTTTTGATTTCCATGGATTTCATAGCCAATCCTTTTCGGCTTTCTTCTTCCTCCTCGCCTTCGTTTGGGAATCTCTTTGACAGAGTTCGAGAAATTTGCTGCTATGCGGTTTATGCGATTCTTGGCAACATTTTGTCTGCGATCTTCACTTTCTTCTTCGCCCTAGTGGGGACTTTGCTTGGAGCCATGACTGGAGCATTAATTGGCCAAGAAACAGAGAGTGGGTTTGTTAGAGGAGCTGCTGTTGGGGCAATTTCTGGTGCTGTTTTTTCAATTGAAGTCTTTGAATCTTCTTTGGTTCTTTGGCAATCAGATGAATCAGGGATAGGTTGTCTTCTTTATCTGATTGATGTCATTGCAAGCCTCCTCAGTGGACGACTAGTTCGAGAACGGATCGGTCCAGCGATATTGAGCGCAGTTCAAAGTCAGATGGGTGCTGCAGAGACGAGCTTTGACGACATCTCGAACATCTTCGACACCGGCAGCTCGAAAGGACTGCCTGGGGACCTGGTTGAGAAAATTCCCAAGATCATGGTGTCTAAGAACAACAGTGTAGATGCTTATGGAGAAAAAGTCTGTTGTTCCGTTTGCCTTCAGGACTTTCAGCTTGGAGAGACTGTAAGAAGCTTACCATATTGTCATCACATGTTCCATTTGCCCTGCATTGATAAATGGCTTATTACTCATGGTTCTTGCCCTTTATGCAGAAGGGATCTGTAATATTTTTCCACTCACCACTGTGTTAACCTTGCCCTTGTAAATTACAAAGAGAAAATTTCCTTATTTTCGGGTTAGATCATTGATTTAGTAGTTCGATATAGAGGCGTCAGACTCGGAACATACTGTGACGATCGATCCTCACCAATGTATAAAATTTTTGAGTAATTATACCCTTATATGCTCTTGTGAATAAACCATATTCCTTCTTTTTTTTTTCCTTGCTGATCAATTATGCTATGAGTTTTGGTTGCTTCTCATTTTTTTGCTGAAAGATATAGTGATAGCCTTCTTTAACAACCTTTAAGATTCAGCCATTGCTTTGTTCATCTTTAAACAGTCACTCAATCATTTTGTGAGATCCCACATCGGTTGGAGAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGTAGACGTGTTTTAAAAACCTTGAGGGAAAATCCAAAGAGAACAATATCTCTAGTGGTGGGCTTTGACTGTTACAAATGGTATCAGAGTCAGACATCGGGCAATGTGCTAGTGAGGAGGCTGAGTCAGTGTGTCAGCAAGGACGTTGTGCTCCAAAAGAGGGT

Coding sequence (CDS)

ATGGATTTCATAGCCAATCCTTTTCGGCTTTCTTCTTCCTCCTCGCCTTCGTTTGGGAATCTCTTTGACAGAGTTCGAGAAATTTGCTGCTATGCGGTTTATGCGATTCTTGGCAACATTTTGTCTGCGATCTTCACTTTCTTCTTCGCCCTAGTGGGGACTTTGCTTGGAGCCATGACTGGAGCATTAATTGGCCAAGAAACAGAGAGTGGGTTTGTTAGAGGAGCTGCTGTTGGGGCAATTTCTGGTGCTGTTTTTTCAATTGAAGTCTTTGAATCTTCTTTGGTTCTTTGGCAATCAGATGAATCAGGGATAGGTTGTCTTCTTTATCTGATTGATGTCATTGCAAGCCTCCTCAGTGGACGACTAGTTCGAGAACGGATCGGTCCAGCGATATTGAGCGCAGTTCAAAGTCAGATGGGTGCTGCAGAGACGAGCTTTGACGACATCTCGAACATCTTCGACACCGGCAGCTCGAAAGGACTGCCTGGGGACCTGGTTGAGAAAATTCCCAAGATCATGGTGTCTAAGAACAACAGTGTAGATGCTTATGGAGAAAAAGTCTGTTGTTCCGTTTGCCTTCAGGACTTTCAGCTTGGAGAGACTGTAAGAAGCTTACCATATTGTCATCACATGTTCCATTTGCCCTGCATTGATAAATGGCTTATTACTCATGGTTCTTGCCCTTTATGCAGAAGGGATCTGTAA

Protein sequence

MDFIANPFRLSSSSSPSFGNLFDRVREICCYAVYAILGNILSAIFTFFFALVGTLLGAMTGALIGQETESGFVRGAAVGAISGAVFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLSGRLVRERIGPAILSAVQSQMGAAETSFDDISNIFDTGSSKGLPGDLVEKIPKIMVSKNNSVDAYGEKVCCSVCLQDFQLGETVRSLPYCHHMFHLPCIDKWLITHGSCPLCRRDL

Homology

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BLAST of Carg01197 vs. NCBI nr
Match: XP_022943845.1 (NEP1-interacting protein 1-like [Cucurbita moschata])

HSP 1 Score: 372.1 bits (954), Expect = 1.4e-99
Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0


Query: 1   MDFIANPFRLSSSSSPSFGNLFDRVREICCYAVYAILGNXXXXXXXXXXXXXXXXXXXXX 60
           MDFIANPFRLSSSSSPSFGNLFDRVREICCYAVYAILGNXXXXXXXXXXXXXXXXXXXXX
Sbjct: 40  MDFIANPFRLSSSSSPSFGNLFDRVREICCYAVYAILGNXXXXXXXXXXXXXXXXXXXXX 99

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLS 120
           XXXXXXXXXXXXXXXXXXXXXXXXXFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLS
Sbjct: 100 XXXXXXXXXXXXXXXXXXXXXXXXXFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLS 159

Query: 121 GRLVRERIGPAILSAVQSQMGAAETSFDDISNIFDTGSSKGLPGDLVEKIPKIMVSKNNS 180
           GRLVRERIGPAILSAVQSQMGAAETSFDDISNIFDTGSSKGLPGDLVEKIPKIMVSKNNS
Sbjct: 160 GRLVRERIGPAILSAVQSQMGAAETSFDDISNIFDTGSSKGLPGDLVEKIPKIMVSKNNS 219

Query: 181 VDAYGEKVCCSVCLQDFQLGETVRSLPYCHHMFHLPCIDKWLITHGSCPLCRRDL 236
           VDAYGEKVCCSVCLQDFQLGETVRSLPYCHHMFHLPCIDKWLITHGSCPLCRRDL
Sbjct: 220 VDAYGEKVCCSVCLQDFQLGETVRSLPYCHHMFHLPCIDKWLITHGSCPLCRRDL 274

[Close]

BLAST of Carg01197 vs. NCBI nr
Match: XP_023540944.1 (NEP1-interacting protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 370.5 bits (950), Expect = 4.1e-99
Identity = 234/235 (99.57%), Postives = 235/235 (100.00%), Query Frame = 0


Query: 1   MDFIANPFRLSSSSSPSFGNLFDRVREICCYAVYAILGNXXXXXXXXXXXXXXXXXXXXX 60
           MDFIANPFRLSSSSSPSFGNLF+RVREICCYAVYAILGNXXXXXXXXXXXXXXXXXXXXX
Sbjct: 40  MDFIANPFRLSSSSSPSFGNLFERVREICCYAVYAILGNXXXXXXXXXXXXXXXXXXXXX 99

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLS 120
           XXXXXXXXXXXXXXXXXXXXXXXXXFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLS
Sbjct: 100 XXXXXXXXXXXXXXXXXXXXXXXXXFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLS 159

Query: 121 GRLVRERIGPAILSAVQSQMGAAETSFDDISNIFDTGSSKGLPGDLVEKIPKIMVSKNNS 180
           GRLVRERIGPAILSAVQSQMGAAETSFDDISNIFDTGSSKGLPGDLVEKIPKIMVSKNNS
Sbjct: 160 GRLVRERIGPAILSAVQSQMGAAETSFDDISNIFDTGSSKGLPGDLVEKIPKIMVSKNNS 219

Query: 181 VDAYGEKVCCSVCLQDFQLGETVRSLPYCHHMFHLPCIDKWLITHGSCPLCRRDL 236
           VDAYGEKVCCSVCLQDFQLGETVRSLPYCHHMFHLPCIDKWLITHGSCPLCRRDL
Sbjct: 220 VDAYGEKVCCSVCLQDFQLGETVRSLPYCHHMFHLPCIDKWLITHGSCPLCRRDL 274

[Close]

BLAST of Carg01197 vs. NCBI nr
Match: XP_022971538.1 (NEP1-interacting protein 1-like [Cucurbita maxima])

HSP 1 Score: 365.9 bits (938), Expect = 1.0e-97
Identity = 233/235 (99.15%), Postives = 234/235 (99.57%), Query Frame = 0


Query: 1   MDFIANPFRLSSSSSPSFGNLFDRVREICCYAVYAILGNXXXXXXXXXXXXXXXXXXXXX 60
           MDFIANPFRLSSSSSPSFGNLF+RVREICCYAVYAILGNXXXXXXXXXXXXXXXXXXXXX
Sbjct: 40  MDFIANPFRLSSSSSPSFGNLFERVREICCYAVYAILGNXXXXXXXXXXXXXXXXXXXXX 99

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLS 120
           XXXXXXXXXXXXXXXXXXXXXXXXXFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLS
Sbjct: 100 XXXXXXXXXXXXXXXXXXXXXXXXXFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLS 159

Query: 121 GRLVRERIGPAILSAVQSQMGAAETSFDDISNIFDTGSSKGLPGDLVEKIPKIMVSKNNS 180
           GRLVRERIGPAILSAVQSQMGAAETSFDDISNIFDTGSSKGLPGDLVEKIPKIMVSKNNS
Sbjct: 160 GRLVRERIGPAILSAVQSQMGAAETSFDDISNIFDTGSSKGLPGDLVEKIPKIMVSKNNS 219

Query: 181 VDAYGEKVCCSVCLQDFQLGETVRSLPYCHHMFHLPCIDKWLITHGSCPLCRRDL 236
           VDAYGEKV CSVCLQDFQLGETVRSLPYCHHMFHLPCIDKWLITHGSCPLCRRDL
Sbjct: 220 VDAYGEKVGCSVCLQDFQLGETVRSLPYCHHMFHLPCIDKWLITHGSCPLCRRDL 274

[Close]

BLAST of Carg01197 vs. NCBI nr
Match: XP_004146160.1 (PREDICTED: NEP1-interacting protein 2 [Cucumis sativus] >XP_008448516.1 PREDICTED: NEP1-interacting protein 2-like [Cucumis melo] >KGN55636.1 hypothetical protein Csa_3G002560 [Cucumis sativus])

HSP 1 Score: 352.8 bits (904), Expect = 8.8e-94
Identity = 224/235 (95.32%), Postives = 229/235 (97.45%), Query Frame = 0


Query: 1   MDFIANPFRLSSSSSPSFGNLFDRVREICCYAVYAILGNXXXXXXXXXXXXXXXXXXXXX 60
           MDFIANPFR SSSSSPSFGNLF+RVREICCYAV AILGNXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MDFIANPFRFSSSSSPSFGNLFERVREICCYAVSAILGNXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLS 120
           XXXXXXXXXXXXXXXXXXXXXXXXXFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLS
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLS 120

Query: 121 GRLVRERIGPAILSAVQSQMGAAETSFDDISNIFDTGSSKGLPGDLVEKIPKIMVSKNNS 180
           GRLVRERIGPAILSAVQSQMGA ETSFDDI NIFDT S+KGLPGD VEKIPKI+VSKNNS
Sbjct: 121 GRLVRERIGPAILSAVQSQMGATETSFDDIPNIFDTSSAKGLPGDSVEKIPKIVVSKNNS 180

Query: 181 VDAYGEKVCCSVCLQDFQLGETVRSLPYCHHMFHLPCIDKWLITHGSCPLCRRDL 236
           VDAYGE+VCCSVCLQDFQLGETVRSLPYCHHMFHLPCIDKWL+THGSCPLCRRDL
Sbjct: 181 VDAYGERVCCSVCLQDFQLGETVRSLPYCHHMFHLPCIDKWLLTHGSCPLCRRDL 235

[Close]

BLAST of Carg01197 vs. NCBI nr
Match: XP_022923585.1 (NEP1-interacting protein 2 [Cucurbita moschata] >XP_022965302.1 NEP1-interacting protein 2-like [Cucurbita maxima] >XP_023551841.1 NEP1-interacting protein 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 352.1 bits (902), Expect = 1.5e-93
Identity = 223/235 (94.89%), Postives = 229/235 (97.45%), Query Frame = 0


Query: 1   MDFIANPFRLSSSSSPSFGNLFDRVREICCYAVYAILGNXXXXXXXXXXXXXXXXXXXXX 60
           MDFIANPFR SSSSSPSFGNLF+RVR+ICCYAV AILGNXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MDFIANPFRFSSSSSPSFGNLFERVRDICCYAVSAILGNXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLS 120
           XXXXXXXXXXXXXXXXXXXXXXXXXFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLS
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLS 120

Query: 121 GRLVRERIGPAILSAVQSQMGAAETSFDDISNIFDTGSSKGLPGDLVEKIPKIMVSKNNS 180
           GRLVRERIGPAILSAVQSQMGA ETSFDDI NIFDT S+KGLPGD VEKIPKI+VSKNNS
Sbjct: 121 GRLVRERIGPAILSAVQSQMGATETSFDDIPNIFDTSSAKGLPGDSVEKIPKILVSKNNS 180

Query: 181 VDAYGEKVCCSVCLQDFQLGETVRSLPYCHHMFHLPCIDKWLITHGSCPLCRRDL 236
           VDAYGE+VCCSVCLQDFQLGETVRSLPYCHHMFHLPCIDKWL+THGSCPLCRRDL
Sbjct: 181 VDAYGERVCCSVCLQDFQLGETVRSLPYCHHMFHLPCIDKWLLTHGSCPLCRRDL 235

[Close]

BLAST of Carg01197 vs. TAIR10
Match: AT4G35840.1 (RING/U-box superfamily protein)

HSP 1 Score: 250.8 bits (639), Expect = 8.6e-67
Identity = 169/223 (75.78%), Postives = 194/223 (87.00%), Query Frame = 0


Query: 13  SSSPSFGNLFDRVREICCYAVYAILGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 72
           SS PS  N  +R+++ C + + A+   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 14  SSCPSLENFIERIKDACRFTLSAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 73

Query: 73  XXXXXXXXXXXXXFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLSGRLVRERIGPAI 132
           XXXXXXXXXXXX FSIEVFESSLVLW+S+ES  GCLLYLIDVI SL+SGRLVRERIGPA+
Sbjct: 74  XXXXXXXXXXXXVFSIEVFESSLVLWKSNESRFGCLLYLIDVIVSLISGRLVRERIGPAM 133

Query: 133 LSAVQSQMGAAETSFDDISNIFDTGSSKGLPGDLVEKIPKIMVSKNNSVDAYGEKVCCSV 192
           LSAVQSQMGA +++F+++S+IFDTG SKGL GDLV+KIPKI ++  N++DA G K  CSV
Sbjct: 134 LSAVQSQMGAVDSTFEELSSIFDTGGSKGLTGDLVDKIPKIKITGKNNLDASGNKDSCSV 193

Query: 193 CLQDFQLGETVRSLPYCHHMFHLPCIDKWLITHGSCPLCRRDL 236
           CLQDFQLGETVRSLP+CHHMFHLPCID WL  HGSCP+CRRDL
Sbjct: 194 CLQDFQLGETVRSLPHCHHMFHLPCIDNWLFRHGSCPMCRRDL 236

[Close]

BLAST of Carg01197 vs. TAIR10
Match: AT2G17730.2 (NEP-interacting protein 2)

HSP 1 Score: 237.3 bits (604), Expect = 9.8e-63
Identity = 166/213 (77.93%), Postives = 185/213 (86.85%), Query Frame = 0


Query: 13  SSSPSFGNLFDRVREICCYAVYAILGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 72
           SSSPS GN  +R+++ C + V A+LG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 19  SSSPSLGNFVERIKDACHFLVSAVLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 78

Query: 73  XXXXXXXXXXXXXFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLSGRLVRERIGPAI 132
           XXXXXXXXXXXX FSIEVFESSL LW+SDESG GC LYLIDVI SLLSGRLVRERIGPA+
Sbjct: 79  XXXXXXXXXXXXVFSIEVFESSLDLWKSDESGFGCFLYLIDVIVSLLSGRLVRERIGPAM 138

Query: 133 LSAVQSQMGAAETSFDDISNIFDTGSSKGLPGDLVEKIPKIMVSKNNSVDAYGEKVCCSV 192
           LSAVQSQMGA +T+FDD +++FDTG SKGL GDLVEKIPK+ ++ NN+ DA      CSV
Sbjct: 139 LSAVQSQMGAVDTAFDDHTSLFDTGGSKGLTGDLVEKIPKMTITGNNNTDASENTDSCSV 198

Query: 193 CLQDFQLGETVRSLPYCHHMFHLPCIDKWLITH 226
           CLQDFQLGETVRSLP+CHHMFHLPCID WL+ H
Sbjct: 199 CLQDFQLGETVRSLPHCHHMFHLPCIDNWLLRH 231

[Close]

BLAST of Carg01197 vs. TAIR10
Match: AT5G66070.2 (RING/U-box superfamily protein)

HSP 1 Score: 218.8 bits (556), Expect = 3.6e-57
Identity = 114/174 (65.52%), Postives = 126/174 (72.41%), Query Frame = 0


Query: 86  FSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLSGRLVRERIGPAILSAVQS------- 145
           FSIEVFESSL+LWQSDESGIGCLLYLIDVIASLLSGRLVRERIGPA+LSAVQS       
Sbjct: 77  FSIEVFESSLLLWQSDESGIGCLLYLIDVIASLLSGRLVRERIGPAMLSAVQSQVQLPFL 136

Query: 146 -----------------QMGAAETSFDDISNIFDTGSSKGLPGDLVEKIPKIMVSKNNSV 205
                            QMGA E+ F D ++IFDT  SKGL GD + +IPK+ ++     
Sbjct: 137 FFDASFIILLNFCINNKQMGAVESQFQDHTDIFDTAISKGLTGDSLNRIPKVRIT----- 196

Query: 206 DAYGEKVCCSVCLQDFQLGETVRSLPYCHHMFHLPCIDKWLITHGSCPLCRRDL 236
           D   E V CSVCLQDFQ+GETVRSLP+CHHMFHLPCIDKWL  H SCPLCRR L
Sbjct: 197 DTSPEIVSCSVCLQDFQVGETVRSLPHCHHMFHLPCIDKWLRRHASCPLCRRHL 245

[Close]

BLAST of Carg01197 vs. TAIR10
Match: AT1G74410.1 (RING/U-box superfamily protein)

HSP 1 Score: 112.8 bits (281), Expect = 2.8e-25
Identity = 54/147 (36.73%), Postives = 87/147 (59.18%), Query Frame = 0


Query: 87  SIEVFESSLVLWQSDESGIGCLLYLIDVIASLLSGRLVRERIGPAILSAVQSQMGAAETS 146
           S+EV E+S   W  + SG      + D +  L  GRLV E++   ++++   Q+  ++ S
Sbjct: 76  SVEVLEASRAYWYLELSGSRGPSSMADFVEQLFRGRLVDEQLMSTMINSHHWQLRISDVS 135

Query: 147 FDDISNIFDTGSSKGLPGDLVEKIPKIMVSKNNSVDAYGEKVCCSVCLQDFQLGETVRSL 206
           +++  +++    ++GL GD + K+P  ++S   S     +   C++CLQD + GE  RSL
Sbjct: 136 YEEREDVYGELEARGLSGDSLRKLPCYIMS---SEMVRRQVTHCTICLQDIKTGEITRSL 195

Query: 207 PYCHHMFHLPCIDKWLITHGSCPLCRR 234
           P C H FHL C+DKWLI HGSCP+CR+
Sbjct: 196 PKCDHTFHLVCVDKWLIRHGSCPICRQ 219

[Close]

BLAST of Carg01197 vs. TAIR10
Match: AT3G20395.1 (RING/U-box superfamily protein)

HSP 1 Score: 86.3 bits (212), Expect = 2.8e-17
Identity = 44/125 (35.20%), Postives = 71/125 (56.80%), Query Frame = 0


Query: 112 IDVIASLLSGRLVRERIGPAILSAVQSQMGAAETSFDDISNIFD-TGSSKGLPGDLVEKI 171
           + ++  +++G+ +   + P +L A Q Q+ A +TS+ + SN++D     KGL    ++ I
Sbjct: 97  VALLRRVVNGKAIMGLVRPFVLKAYQWQIIALDTSYMESSNLYDFNHEKKGLSKSSIQNI 156

Query: 172 PKIMVSKNNSVDAYGEKVCCSVCLQDFQLGETVRSLPYCHHMFHLPCIDKWLITHGSCPL 231
           P      N S   +  K  CS+CLQD++ GE  R L  C H FH+ CID+WL+   +CP+
Sbjct: 157 PMFY---NRS--EHQTKSSCSICLQDWEEGEVGRKLARCGHTFHMNCIDEWLLRQETCPI 216

Query: 232 CRRDL 236
           CR  L
Sbjct: 217 CRDHL 216

[Close]

BLAST of Carg01197 vs. Swiss-Prot
Match: sp|Q8GT74|NIP2_ARATH (NEP1-interacting protein 2 OS=Arabidopsis thaliana OX=3702 GN=NIP2 PE=1 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 3.3e-68
Identity = 174/223 (78.03%), Postives = 195/223 (87.44%), Query Frame = 0


Query: 13  SSSPSFGNLFDRVREICCYAVYAILGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 72
           SSSPS GN  +R+++ C + V A+LG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 19  SSSPSLGNFVERIKDACHFLVSAVLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 78

Query: 73  XXXXXXXXXXXXXFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLSGRLVRERIGPAI 132
           XXXXXXXXXXXX FSIEVFESSL LW+SDESG GC LYLIDVI SLLSGRLVRERIGPA+
Sbjct: 79  XXXXXXXXXXXXVFSIEVFESSLDLWKSDESGFGCFLYLIDVIVSLLSGRLVRERIGPAM 138

Query: 133 LSAVQSQMGAAETSFDDISNIFDTGSSKGLPGDLVEKIPKIMVSKNNSVDAYGEKVCCSV 192
           LSAVQSQMGA +T+FDD +++FDTG SKGL GDLVEKIPK+ ++ NN+ DA      CSV
Sbjct: 139 LSAVQSQMGAVDTAFDDHTSLFDTGGSKGLTGDLVEKIPKMTITGNNNTDASENTDSCSV 198

Query: 193 CLQDFQLGETVRSLPYCHHMFHLPCIDKWLITHGSCPLCRRDL 236
           CLQDFQLGETVRSLP+CHHMFHLPCID WL+ HGSCP+CRRD+
Sbjct: 199 CLQDFQLGETVRSLPHCHHMFHLPCIDNWLLRHGSCPMCRRDI 241

[Close]

BLAST of Carg01197 vs. Swiss-Prot
Match: sp|Q8GT75|NIP1_ARATH (NEP1-interacting protein 1 OS=Arabidopsis thaliana OX=3702 GN=NIP1 PE=1 SV=2)

HSP 1 Score: 250.8 bits (639), Expect = 1.5e-65
Identity = 169/223 (75.78%), Postives = 194/223 (87.00%), Query Frame = 0


Query: 13  SSSPSFGNLFDRVREICCYAVYAILGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 72
           SS PS  N  +R+++ C + + A+   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 14  SSCPSLENFIERIKDACRFTLSAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 73

Query: 73  XXXXXXXXXXXXXFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLSGRLVRERIGPAI 132
           XXXXXXXXXXXX FSIEVFESSLVLW+S+ES  GCLLYLIDVI SL+SGRLVRERIGPA+
Sbjct: 74  XXXXXXXXXXXXVFSIEVFESSLVLWKSNESRFGCLLYLIDVIVSLISGRLVRERIGPAM 133

Query: 133 LSAVQSQMGAAETSFDDISNIFDTGSSKGLPGDLVEKIPKIMVSKNNSVDAYGEKVCCSV 192
           LSAVQSQMGA +++F+++S+IFDTG SKGL GDLV+KIPKI ++  N++DA G K  CSV
Sbjct: 134 LSAVQSQMGAVDSTFEELSSIFDTGGSKGLTGDLVDKIPKIKITGKNNLDASGNKDSCSV 193

Query: 193 CLQDFQLGETVRSLPYCHHMFHLPCIDKWLITHGSCPLCRRDL 236
           CLQDFQLGETVRSLP+CHHMFHLPCID WL  HGSCP+CRRDL
Sbjct: 194 CLQDFQLGETVRSLPHCHHMFHLPCIDNWLFRHGSCPMCRRDL 236

[Close]

BLAST of Carg01197 vs. Swiss-Prot
Match: sp|Q9FKX5|NIPL1_ARATH (NEP1-interacting protein-like 1 OS=Arabidopsis thaliana OX=3702 GN=ATL27 PE=2 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 5.7e-60
Identity = 114/150 (76.00%), Postives = 126/150 (84.00%), Query Frame = 0


Query: 86  FSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLSGRLVRERIGPAILSAVQSQMGAAET 145
           FSIEVFESSL+LWQSDESGIGCLLYLIDVIASLLSGRLVRERIGPA+LSAVQSQMGA E+
Sbjct: 77  FSIEVFESSLLLWQSDESGIGCLLYLIDVIASLLSGRLVRERIGPAMLSAVQSQMGAVES 136

Query: 146 SFDDISNIFDTGSSKGLPGDLVEKIPKIMVSKNNSVDAYGEKVCCSVCLQDFQLGETVRS 205
            F D ++IFDT  SKGL GD + +IPK+ ++     D   E V CSVCLQDFQ+GETVRS
Sbjct: 137 QFQDHTDIFDTAISKGLTGDSLNRIPKVRIT-----DTSPEIVSCSVCLQDFQVGETVRS 196

Query: 206 LPYCHHMFHLPCIDKWLITHGSCPLCRRDL 236
           LP+CHHMFHLPCIDKWL  H SCPLCRR L
Sbjct: 197 LPHCHHMFHLPCIDKWLRRHASCPLCRRHL 221

[Close]

BLAST of Carg01197 vs. Swiss-Prot
Match: sp|Q8LBA0|NIPL2_ARATH (NEP1-interacting protein-like 2 OS=Arabidopsis thaliana OX=3702 GN=ATL24 PE=1 SV=2)

HSP 1 Score: 112.8 bits (281), Expect = 5.0e-24
Identity = 54/147 (36.73%), Postives = 87/147 (59.18%), Query Frame = 0


Query: 87  SIEVFESSLVLWQSDESGIGCLLYLIDVIASLLSGRLVRERIGPAILSAVQSQMGAAETS 146
           S+EV E+S   W  + SG      + D +  L  GRLV E++   ++++   Q+  ++ S
Sbjct: 76  SVEVLEASRAYWYLELSGSRGPSSMADFVEQLFRGRLVDEQLMSTMINSHHWQLRISDVS 135

Query: 147 FDDISNIFDTGSSKGLPGDLVEKIPKIMVSKNNSVDAYGEKVCCSVCLQDFQLGETVRSL 206
           +++  +++    ++GL GD + K+P  ++S   S     +   C++CLQD + GE  RSL
Sbjct: 136 YEEREDVYGELEARGLSGDSLRKLPCYIMS---SEMVRRQVTHCTICLQDIKTGEITRSL 195

Query: 207 PYCHHMFHLPCIDKWLITHGSCPLCRR 234
           P C H FHL C+DKWLI HGSCP+CR+
Sbjct: 196 PKCDHTFHLVCVDKWLIRHGSCPICRQ 219

[Close]

BLAST of Carg01197 vs. Swiss-Prot
Match: sp|Q9SRQ8|ATL51_ARATH (RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2)

HSP 1 Score: 80.1 bits (196), Expect = 3.6e-14
Identity = 33/63 (52.38%), Postives = 42/63 (66.67%), Query Frame = 0


Query: 170 IPKIMVSKNNSVDAYGEKVCCSVCLQDFQLGETVRSLPYCHHMFHLPCIDKWLITHGSCP 229
           I  I V K   +D + E   CSVCL +FQ  E++R LP C+H FH+PCID WL +H +CP
Sbjct: 139 IKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCP 198

Query: 230 LCR 233
           LCR
Sbjct: 199 LCR 201

[Close]

BLAST of Carg01197 vs. TrEMBL
Match: tr|A0A1S3BJV1|A0A1S3BJV1_CUCME (NEP1-interacting protein 2-like OS=Cucumis melo OX=3656 GN=LOC103490668 PE=4 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 5.8e-94
Identity = 224/235 (95.32%), Postives = 229/235 (97.45%), Query Frame = 0


Query: 1   MDFIANPFRLSSSSSPSFGNLFDRVREICCYAVYAILGNXXXXXXXXXXXXXXXXXXXXX 60
           MDFIANPFR SSSSSPSFGNLF+RVREICCYAV AILGNXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MDFIANPFRFSSSSSPSFGNLFERVREICCYAVSAILGNXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLS 120
           XXXXXXXXXXXXXXXXXXXXXXXXXFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLS
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLS 120

Query: 121 GRLVRERIGPAILSAVQSQMGAAETSFDDISNIFDTGSSKGLPGDLVEKIPKIMVSKNNS 180
           GRLVRERIGPAILSAVQSQMGA ETSFDDI NIFDT S+KGLPGD VEKIPKI+VSKNNS
Sbjct: 121 GRLVRERIGPAILSAVQSQMGATETSFDDIPNIFDTSSAKGLPGDSVEKIPKIVVSKNNS 180

Query: 181 VDAYGEKVCCSVCLQDFQLGETVRSLPYCHHMFHLPCIDKWLITHGSCPLCRRDL 236
           VDAYGE+VCCSVCLQDFQLGETVRSLPYCHHMFHLPCIDKWL+THGSCPLCRRDL
Sbjct: 181 VDAYGERVCCSVCLQDFQLGETVRSLPYCHHMFHLPCIDKWLLTHGSCPLCRRDL 235

[Close]

BLAST of Carg01197 vs. TrEMBL
Match: tr|A0A0A0L659|A0A0A0L659_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G002560 PE=4 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 5.8e-94
Identity = 224/235 (95.32%), Postives = 229/235 (97.45%), Query Frame = 0


Query: 1   MDFIANPFRLSSSSSPSFGNLFDRVREICCYAVYAILGNXXXXXXXXXXXXXXXXXXXXX 60
           MDFIANPFR SSSSSPSFGNLF+RVREICCYAV AILGNXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MDFIANPFRFSSSSSPSFGNLFERVREICCYAVSAILGNXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLS 120
           XXXXXXXXXXXXXXXXXXXXXXXXXFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLS
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLS 120

Query: 121 GRLVRERIGPAILSAVQSQMGAAETSFDDISNIFDTGSSKGLPGDLVEKIPKIMVSKNNS 180
           GRLVRERIGPAILSAVQSQMGA ETSFDDI NIFDT S+KGLPGD VEKIPKI+VSKNNS
Sbjct: 121 GRLVRERIGPAILSAVQSQMGATETSFDDIPNIFDTSSAKGLPGDSVEKIPKIVVSKNNS 180

Query: 181 VDAYGEKVCCSVCLQDFQLGETVRSLPYCHHMFHLPCIDKWLITHGSCPLCRRDL 236
           VDAYGE+VCCSVCLQDFQLGETVRSLPYCHHMFHLPCIDKWL+THGSCPLCRRDL
Sbjct: 181 VDAYGERVCCSVCLQDFQLGETVRSLPYCHHMFHLPCIDKWLLTHGSCPLCRRDL 235

[Close]

BLAST of Carg01197 vs. TrEMBL
Match: tr|M5VVI9|M5VVI9_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G174700 PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 1.4e-82
Identity = 205/235 (87.23%), Postives = 220/235 (93.62%), Query Frame = 0


Query: 1   MDFIANPFRLSSSSSPSFGNLFDRVREICCYAVYAILGNXXXXXXXXXXXXXXXXXXXXX 60
           MDFIA+P R SSSSS SFGN F+R++E C +AV AILGNXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MDFIAHPSRFSSSSSFSFGNFFERIKEFCNFAVSAILGNXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLS 120
           XXXXXXXXXXXXXXXXXXXXXXXXXFSIEVFESSL+LWQSDESGIGCLLYLIDVIASLLS
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXFSIEVFESSLILWQSDESGIGCLLYLIDVIASLLS 120

Query: 121 GRLVRERIGPAILSAVQSQMGAAETSFDDISNIFDTGSSKGLPGDLVEKIPKIMVSKNNS 180
           GRLVRERIGPA+LSAVQSQMGA E+SFD+I NIFDTG SKGLPGD VEKIPKI+++ NN+
Sbjct: 121 GRLVRERIGPAMLSAVQSQMGAVESSFDEIPNIFDTGGSKGLPGDSVEKIPKIIITSNNN 180

Query: 181 VDAYGEKVCCSVCLQDFQLGETVRSLPYCHHMFHLPCIDKWLITHGSCPLCRRDL 236
           VDA GEKV CSVCLQDFQLGETVRSLP+CHHMFHLPCIDKWL+ HGSCPLCRRDL
Sbjct: 181 VDASGEKVSCSVCLQDFQLGETVRSLPHCHHMFHLPCIDKWLLRHGSCPLCRRDL 235

[Close]

BLAST of Carg01197 vs. TrEMBL
Match: tr|A0A2P4M368|A0A2P4M368_QUESU (Nep1-interacting protein 2 OS=Quercus suber OX=58331 GN=CFP56_44949 PE=4 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 5.0e-77
Identity = 198/235 (84.26%), Postives = 212/235 (90.21%), Query Frame = 0


Query: 1   MDFIANPFRLSSSSSPSFGNLFDRVREICCYAVYAILGNXXXXXXXXXXXXXXXXXXXXX 60
           MDFIA P   SSSSS SFGN  DRVRE C +AV AI   XXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MDFIAYPSLFSSSSSSSFGNFIDRVREACHFAVSAIXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLS 120
           XXXXXXXXXXXXXXXXXXXXXXXXXFSIEVFESSLVLWQSDESGIGC+LYLIDVIASLLS
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXFSIEVFESSLVLWQSDESGIGCVLYLIDVIASLLS 120

Query: 121 GRLVRERIGPAILSAVQSQMGAAETSFDDISNIFDTGSSKGLPGDLVEKIPKIMVSKNNS 180
           GRLVRERIGPA+LSAVQSQMGA ETSFD+I NIFDTG +KGLPGD VEKIPKI+++ NN+
Sbjct: 121 GRLVRERIGPAMLSAVQSQMGAVETSFDEIPNIFDTGGAKGLPGDSVEKIPKIVITSNNN 180

Query: 181 VDAYGEKVCCSVCLQDFQLGETVRSLPYCHHMFHLPCIDKWLITHGSCPLCRRDL 236
           VDA G++V CSVCLQDFQLGET RSLP+CHH+FHL CIDKWL+ HGSCPLCRRDL
Sbjct: 181 VDASGDRVSCSVCLQDFQLGETARSLPHCHHIFHLACIDKWLLRHGSCPLCRRDL 235

[Close]

BLAST of Carg01197 vs. TrEMBL
Match: tr|A0A2I4G133|A0A2I4G133_9ROSI (NEP1-interacting protein-like 1 OS=Juglans regia OX=51240 GN=LOC109003766 PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 8.5e-77
Identity = 194/235 (82.55%), Postives = 211/235 (89.79%), Query Frame = 0


Query: 1   MDFIANPFRLSSSSSPSFGNLFDRVREICCYAVYAILGNXXXXXXXXXXXXXXXXXXXXX 60
           MDFIA+P  L+SSSS  F N F+RVR+   +A  A+LGN  XXXXXXXXXXXXXXXXXXX
Sbjct: 1   MDFIAHPSVLASSSSSLFVNFFERVRDGFHFAASAVLGNIFXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLS 120
           XXXXXXXXXXXXXXXXXXXXXXXX FSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLS
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXVFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLS 120

Query: 121 GRLVRERIGPAILSAVQSQMGAAETSFDDISNIFDTGSSKGLPGDLVEKIPKIMVSKNNS 180
           GRLVRERIGPA+LSAVQSQMGA E SFD+I NIFDTG +KGLPGD VEKIPKI+++KNN+
Sbjct: 121 GRLVRERIGPAMLSAVQSQMGAVEASFDEIPNIFDTGGAKGLPGDSVEKIPKIIITKNNN 180

Query: 181 VDAYGEKVCCSVCLQDFQLGETVRSLPYCHHMFHLPCIDKWLITHGSCPLCRRDL 236
           +D  GE+V CSVCLQDFQLGETVR LP+CHHMFHLPCIDKWL+ HGSCPLCRRDL
Sbjct: 181 IDTSGEEVSCSVCLQDFQLGETVRCLPHCHHMFHLPCIDKWLLRHGSCPLCRRDL 235

The following BLAST results are available for this feature:

BLAST of Carg01197 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022943845.1	1.4e-99	100.00	NEP1-interacting protein 1-like [Cucurbita moschata]	[more]
XP_023540944.1	4.1e-99	99.57	NEP1-interacting protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022971538.1	1.0e-97	99.15	NEP1-interacting protein 1-like [Cucurbita maxima]	[more]
XP_004146160.1	8.8e-94	95.32	PREDICTED: NEP1-interacting protein 2 [Cucumis sativus] >XP_008448516.1 PREDICTE...	[more]
XP_022923585.1	1.5e-93	94.89	NEP1-interacting protein 2 [Cucurbita moschata] >XP_022965302.1 NEP1-interacting...	[more]

BLAST of Carg01197 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G35840.1	8.6e-67	75.78	RING/U-box superfamily protein	[more]
AT2G17730.2	9.8e-63	77.93	NEP-interacting protein 2	[more]
AT5G66070.2	3.6e-57	65.52	RING/U-box superfamily protein	[more]
AT1G74410.1	2.8e-25	36.73	RING/U-box superfamily protein	[more]
AT3G20395.1	2.8e-17	35.20	RING/U-box superfamily protein	[more]

BLAST of Carg01197 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8GT74\|NIP2_ARATH	3.3e-68	78.03	NEP1-interacting protein 2 OS=Arabidopsis thaliana OX=3702 GN=NIP2 PE=1 SV=1	[more]
sp\|Q8GT75\|NIP1_ARATH	1.5e-65	75.78	NEP1-interacting protein 1 OS=Arabidopsis thaliana OX=3702 GN=NIP1 PE=1 SV=2	[more]
sp\|Q9FKX5\|NIPL1_ARATH	5.7e-60	76.00	NEP1-interacting protein-like 1 OS=Arabidopsis thaliana OX=3702 GN=ATL27 PE=2 SV...	[more]
sp\|Q8LBA0\|NIPL2_ARATH	5.0e-24	36.73	NEP1-interacting protein-like 2 OS=Arabidopsis thaliana OX=3702 GN=ATL24 PE=1 SV...	[more]
sp\|Q9SRQ8\|ATL51_ARATH	3.6e-14	52.38	RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2	[more]

BLAST of Carg01197 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BJV1\|A0A1S3BJV1_CUCME	5.8e-94	95.32	NEP1-interacting protein 2-like OS=Cucumis melo OX=3656 GN=LOC103490668 PE=4 SV=...	[more]
tr\|A0A0A0L659\|A0A0A0L659_CUCSA	5.8e-94	95.32	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G002560 PE=4 SV=1	[more]
tr\|M5VVI9\|M5VVI9_PRUPE	1.4e-82	87.23	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G174700 PE=4 SV=1	[more]
tr\|A0A2P4M368\|A0A2P4M368_QUESU	5.0e-77	84.26	Nep1-interacting protein 2 OS=Quercus suber OX=58331 GN=CFP56_44949 PE=4 SV=1	[more]
tr\|A0A2I4G133\|A0A2I4G133_9ROSI	8.5e-77	82.55	NEP1-interacting protein-like 1 OS=Juglans regia OX=51240 GN=LOC109003766 PE=4 S...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR013083	Znf_RING/FYVE/PHD
IPR001841	Znf_RING

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg01197-RA	Carg01197-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 190..231 e-value: 1.8E-6 score: 37.5
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 190..232 e-value: 9.4E-11 score: 41.8
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 190..232 score: 11.825
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 153..235 e-value: 2.4E-20 score: 74.0
None	No IPR available	PANTHER	PTHR14155:SF307	NEP1-INTERACTING PROTEIN 1-RELATED	coord: 12..234
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 12..234
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 189..232 e-value: 7.96593E-18 score: 73.4901
None	No IPR available	SUPERFAMILY	SSF57850	RING/U-box	coord: 178..235

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg01197	Cla008921	Watermelon (97103) v1	carwmB0149
Carg01197	Csa3G002560	Cucumber (Chinese Long) v2	carcuB0173
Carg01197	MELO3C013744	Melon (DHL92) v3.5.1	carmeB0165
Carg01197	ClCG10G000480	Watermelon (Charleston Gray)	carwcgB0148
Carg01197	CSPI03G00520	Wild cucumber (PI 183967)	carcpiB0179
Carg01197	Cucsa.322860	Cucumber (Gy14) v1	carcgyB0197
Carg01197	CmaCh06G001340	Cucurbita maxima (Rimu)	carcmaB0216
Carg01197	CmaCh16G012530	Cucurbita maxima (Rimu)	carcmaB0205
Carg01197	CmoCh06G001270	Cucurbita moschata (Rifu)	carcmoB0227
Carg01197	CmoCh16G013020	Cucurbita moschata (Rifu)	carcmoB0216
Carg01197	Lsi07G010810	Bottle gourd (USVL1VR-Ls)	carlsiB146
Carg01197	Cp4.1LG14g10390	Cucurbita pepo (Zucchini)	carcpeB0223
Carg01197	Cp4.1LG08g12920	Cucurbita pepo (Zucchini)	carcpeB0233
Carg01197	CsGy3G000480	Cucumber (Gy14) v2	carcgybB0168
Carg01197	MELO3C013744.2	Melon (DHL92) v3.6.1	carmedB0166
Carg01197	CsaV3_3G000540	Cucumber (Chinese Long) v3	carcucB0179
Carg01197	Cla97C10G185020	Watermelon (97103) v2	carwmbB0160
Carg01197	Bhi11G000247	Wax gourd	carwgoB0198

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg01197	Carg19456	Silver-seed gourd	carcarB191

The following block(s) are covering this gene:


Gene	Organism	Block
Carg01197	Silver-seed gourd	carcarB189