Carg01173 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg01173
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	GPI-GlcNAc transferase complex, PIG-H component
Location	Cucurbita_argyrosperma_scaffold_002 : 1327935 .. 1329936 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCAAGTTTTCGATTACGGATTGGAGATACGGGTACTTTTCCGATAGTAAATGGCAATCTGAAGCAGTTGATATCCATCACGTTGTTGTTCTTAGGAATAGGAGTAATGGAAAGGGTTTCCTGTTCTACATTCTTGCTGCCCTTGCGTTCTGTTTTTTCATACTCAAGGTAATTTGTCATTCTCATTTAATTTTTGATGTGTAGTTTGAAATTCAACAGTACAGAGTTCCTCGTTCTTGCTAATTTGACTCTGATTTCGTGATGTTCATGTCTGTTTCTTTGGTATCCCTGCTTATTTGCTTCCTGTATTCTAAATATGTTTGTGATTGTTTACTGTTCAATTTTATTGCTTTTGAATATCAGTTCTCTTCCACGTACTTACTTGAATAGGATCTGATTTTGTACGTATGTGTTCTTGAGTTCTAAATATGCCAATTTTATTGCAGGTCTCCTCTTTTAAACTATTGTTATTAATGCCTGTGTCCTTTCTTTGGATATTGTTAAGAAAACTTGCACCAAAAAATTCCATAGTTGATTGATATTGATTGAACCGAACTGCCAAAATATTTGCATAAGCGGAAGTAATGGTATCAATGGATATGTGAGATCCCACATCTGTTGGGAGGAGAACAAAACATTTTTTATAAATGTGTGGAAACCTCTCCTTAGTAGACGCGTTTGAAAAGCCTCGAGGGGAAACCTGGAGCTCAAAGAGGACAATATCTGCTAGCGGTGGGCTTAGGCCGTTATAGGATAGGATTACTTTTGATATTCTAACAACACACTTTGAAATCTGTTGAAGTTTTTTTTCAGTGCATGATCAATTGACTCTGGGTTTAACAGGGCCAATCGATCTTTGCTGTCTTATGGTGCTGGGTCTTGAATGTATTGTTTGCCAAGAAGCTGTTCAAGGGAACGGTTGAGAAAGGTGAGGAATTGAGGAAGTTCTGTCTCATACGTTATAATTAATGCAATAGTGTGATCATTTGTTGAAATTTAAGTTCTTGCTCTCATCACTATCCTCTTGATGGATGGGGACGTCTAAATGTGCAGAATCTGTTATGGTTATGCCAAATTTCGGAGTCCAACTCGAAACTCACTATACTAGGTAACTTTTTCCTTCTGTAATTCAGTTTCATTGTCTTGAACTTTCTTATTCAAGGCATCATATATAGCATTGGCTAGTGAAGTTTGGTAATCCTCTGGGATTTGATATCCTTAATTCTTCAACTATTGGGACTACCTCAAACCTTTGCAGTTCATGTTGCCGAATCTAATCGACGTATCAGTTCATCGTTACACACACATAGTTGTGCCTTCTGTATTAGTTTTGCAGATTCTCCCAGGTTCTTATCTGTTCTTTGTCTCTTATTGTAGTGGAAAAGTCATCTGTCGGTTCGTACCAGTTGATAAAATTTTAAAACCAGTTCTCCTTGAATGCGTGACTCCAGTTACTTGTTACTGGAGCCTGTCTTTGATTATACAAGGGGAAGACAAACTATTGCTGGTTTTCAAGGTAACTTTATTGTTTACTTAAGATTTCCTGGTCTGTCCCATGAGCCATATATGATAAATGATGGTAGCAGCGGAATTTTTCTTGTCGATCGTATCTTATTCGGTGGATCCCTCTTGTTCCTATTTAGCAGTGATAAAGAGGATAGAAAATGTAGAATAAAGGATTGTTTTACTCACTCGTTAATCCCTAAGTTTAAGAACGTTTATCTTTTTACTAATTAATTTTGAGTTTAGTTTCTACTTGGCATCTAGATTTCAAAATGTTACATTTTTACTCGTGAAATTTGTCAAAACGGTGAGTCATGATGAGCATTATATATTGTTGTGTTATACCAGCTGAAAATTATTCTTTCCCCTCTAGGAATTACGTCCACCGGTGAAAATGTTGGTGCCTATCTGGAAGGCTTTATGTGCTGGTAAAAACAAAGATGCCTGTTCATAAAGCGATCAGCAATTAGCCATAGCTCCCAGCCACAGTCTTGTA

mRNA sequence

ATGGCCAAGTTTTCGATTACGGATTGGAGATACGGGTACTTTTCCGATAGTAAATGGCAATCTGAAGCAGTTGATATCCATCACGTTGTTGTTCTTAGGAATAGGAGTAATGGAAAGGGTTTCCTGTTCTACATTCTTGCTGCCCTTGCGTTCTGTTTTTTCATACTCAAGGGCCAATCGATCTTTGCTGTCTTATGGTGCTGGGTCTTGAATGTATTGTTTGCCAAGAAGCTGTTCAAGGGAACGGTTGAGAAAGAATCTGTTATGGTTATGCCAAATTTCGGAGTCCAACTCGAAACTCACTATACTAGTGGAAAAGTCATCTGTCGGTTCGTACCAGTTGATAAAATTTTAAAACCAGTTCTCCTTGAATGCGTGACTCCAGTTACTTGTTACTGGAGCCTGTCTTTGATTATACAAGGGGAAGACAAACTATTGCTGGTTTTCAAGGAATTACGTCCACCGGTGAAAATGTTGGTGCCTATCTGGAAGGCTTTATGTGCTGGTAAAAACAAAGATGCCTGTTCATAAAGCGATCAGCAATTAGCCATAGCTCCCAGCCACAGTCTTGTA

Coding sequence (CDS)

ATGGCCAAGTTTTCGATTACGGATTGGAGATACGGGTACTTTTCCGATAGTAAATGGCAATCTGAAGCAGTTGATATCCATCACGTTGTTGTTCTTAGGAATAGGAGTAATGGAAAGGGTTTCCTGTTCTACATTCTTGCTGCCCTTGCGTTCTGTTTTTTCATACTCAAGGGCCAATCGATCTTTGCTGTCTTATGGTGCTGGGTCTTGAATGTATTGTTTGCCAAGAAGCTGTTCAAGGGAACGGTTGAGAAAGAATCTGTTATGGTTATGCCAAATTTCGGAGTCCAACTCGAAACTCACTATACTAGTGGAAAAGTCATCTGTCGGTTCGTACCAGTTGATAAAATTTTAAAACCAGTTCTCCTTGAATGCGTGACTCCAGTTACTTGTTACTGGAGCCTGTCTTTGATTATACAAGGGGAAGACAAACTATTGCTGGTTTTCAAGGAATTACGTCCACCGGTGAAAATGTTGGTGCCTATCTGGAAGGCTTTATGTGCTGGTAAAAACAAAGATGCCTGTTCATAA

Protein sequence

MAKFSITDWRYGYFSDSKWQSEAVDIHHVVVLRNRSNGKGFLFYILAALAFCFFILKGQSIFAVLWCWVLNVLFAKKLFKGTVEKESVMVMPNFGVQLETHYTSGKVICRFVPVDKILKPVLLECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCAGKNKDACS

Homology

[Close]

BLAST of Carg01173 vs. NCBI nr
Match: XP_022946831.1 (uncharacterized protein LOC111450501 [Cucurbita moschata])

HSP 1 Score: 360.9 bits (925), Expect = 2.4e-96
Identity = 173/176 (98.30%), Postives = 175/176 (99.43%), Query Frame = 0


Query: 1   MAKFSITDWRYGYFSDSKWQSEAVDIHHVVVLRNRSNGKGFLFYILAALAFCFFILKGQS 60
           MAKFSITDWRYGYFSDSKWQSEAVDIHHVVVLRNRSNGKGFLFYILAALAFCFFILKGQS
Sbjct: 1   MAKFSITDWRYGYFSDSKWQSEAVDIHHVVVLRNRSNGKGFLFYILAALAFCFFILKGQS 60

Query: 61  IFAVLWCWVLNVLFAKKLFKGTVEKESVMVMPNFGVQLETHYTSGKVICRFVPVDKILKP 120
           IF VLWCW+LNVLFAKKLFKGTV+KESVMVMPNFGVQLETHYTSGKVICRFVPVDKILKP
Sbjct: 61  IFVVLWCWILNVLFAKKLFKGTVQKESVMVMPNFGVQLETHYTSGKVICRFVPVDKILKP 120

Query: 121 VLLECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCAGKNKDACS 177
           VLLECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCAGKNKDACS
Sbjct: 121 VLLECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCAGKNKDACS 176

[Close]

BLAST of Carg01173 vs. NCBI nr
Match: XP_022971392.1 (uncharacterized protein LOC111470129 [Cucurbita maxima])

HSP 1 Score: 359.8 bits (922), Expect = 5.4e-96
Identity = 174/176 (98.86%), Postives = 174/176 (98.86%), Query Frame = 0


Query: 1   MAKFSITDWRYGYFSDSKWQSEAVDIHHVVVLRNRSNGKGFLFYILAALAFCFFILKGQS 60
           MAKFSITDWRYGYFSDSKWQSEAVDIHHVVVLRNRSNGKGFLFYILAALAFCFFILKGQS
Sbjct: 1   MAKFSITDWRYGYFSDSKWQSEAVDIHHVVVLRNRSNGKGFLFYILAALAFCFFILKGQS 60

Query: 61  IFAVLWCWVLNVLFAKKLFKGTVEKESVMVMPNFGVQLETHYTSGKVICRFVPVDKILKP 120
           IF VLWCWVLNVLFAKKLFKGTVEKESVMVMPNFGVQLETHYTSGKVICRFVPVDKILKP
Sbjct: 61  IFVVLWCWVLNVLFAKKLFKGTVEKESVMVMPNFGVQLETHYTSGKVICRFVPVDKILKP 120

Query: 121 VLLECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCAGKNKDACS 177
           VL ECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCAGKNKDACS
Sbjct: 121 VLHECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCAGKNKDACS 176

[Close]

BLAST of Carg01173 vs. NCBI nr
Match: XP_023539514.1 (uncharacterized protein LOC111800156 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 358.6 bits (919), Expect = 1.2e-95
Identity = 172/176 (97.73%), Postives = 175/176 (99.43%), Query Frame = 0


Query: 1   MAKFSITDWRYGYFSDSKWQSEAVDIHHVVVLRNRSNGKGFLFYILAALAFCFFILKGQS 60
           MAKFSITDWRYGYFSDSKWQSEAVDIHHVVVLRNRS+GKGFLFYILAALAFCFFILKGQS
Sbjct: 1   MAKFSITDWRYGYFSDSKWQSEAVDIHHVVVLRNRSSGKGFLFYILAALAFCFFILKGQS 60

Query: 61  IFAVLWCWVLNVLFAKKLFKGTVEKESVMVMPNFGVQLETHYTSGKVICRFVPVDKILKP 120
           IF VLWCW+LNVLFAKKLFKGTVEKESVMVMPNFGVQLETHYTSGKVICRFVPVDKILKP
Sbjct: 61  IFVVLWCWILNVLFAKKLFKGTVEKESVMVMPNFGVQLETHYTSGKVICRFVPVDKILKP 120

Query: 121 VLLECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCAGKNKDACS 177
           VLLECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCAGKNK+ACS
Sbjct: 121 VLLECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCAGKNKEACS 176

[Close]

BLAST of Carg01173 vs. NCBI nr
Match: XP_008448466.1 (PREDICTED: uncharacterized protein LOC103490645 [Cucumis melo] >XP_008448467.1 PREDICTED: uncharacterized protein LOC103490645 [Cucumis melo])

HSP 1 Score: 295.8 bits (756), Expect = 9.6e-77
Identity = 146/180 (81.11%), Postives = 157/180 (87.22%), Query Frame = 0


Query: 1   MAKFSITDWRYGYFSDSKWQSEAVDIHHVVVLRNRSNGKGFLFYILAALAFCFFILKGQS 60
           MAKFSI+D RYGYFSD KW SEAV +HHVVVLRN +  KGFLF + AALAFCFF+LKGQS
Sbjct: 1   MAKFSISDRRYGYFSDCKWPSEAVHVHHVVVLRNTTAEKGFLFCVFAALAFCFFLLKGQS 60

Query: 61  IFAVLWCWVLNVLFAKKLFKGTVEKESVMVMPNFGVQLETHYTSGKVICRFVPVDKILKP 120
           IF  LWC VLNV F KKLFKG+VEKESVMVMPNFGVQLETH+ SGKV+ RFVPVDKILKP
Sbjct: 61  IFVALWCLVLNVFFFKKLFKGSVEKESVMVMPNFGVQLETHFRSGKVLRRFVPVDKILKP 120

Query: 121 VLLECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCAG----KNKDACS 177
           VLLEC+TPVTCYWSLSLI+QGED+LLLVFKELRPPVKMLVPIWKALC      KN DACS
Sbjct: 121 VLLECLTPVTCYWSLSLIVQGEDELLLVFKELRPPVKMLVPIWKALCTATGDDKNGDACS 180

[Close]

BLAST of Carg01173 vs. NCBI nr
Match: XP_022158291.1 (uncharacterized protein LOC111024811 isoform X1 [Momordica charantia] >XP_022158293.1 uncharacterized protein LOC111024811 isoform X1 [Momordica charantia])

HSP 1 Score: 284.6 bits (727), Expect = 2.2e-73
Identity = 143/180 (79.44%), Postives = 152/180 (84.44%), Query Frame = 0


Query: 1   MAKFSITDWRYGYFSDSKWQSEAVDIHHVVVLRNRSNGKGFLFYILAALAFCFFILKGQS 60
           MAKFSIT+WRYGYF DSK  SEAVDIHHVVV R++  GKGFL  I AALAFCFF+LK QS
Sbjct: 1   MAKFSITNWRYGYFRDSKGPSEAVDIHHVVVRRSKGGGKGFLLCIFAALAFCFFLLKDQS 60

Query: 61  IFAVLWCWVLNVLFAKKLFKGTVEKESVMVMPNFGVQLETHYTSGKVICRFVPVDKILKP 120
           IF V WC VLNV FAKKLF+G VEKESV VMPNFGVQLETHY SGKVI +FVPVDK+LK 
Sbjct: 61  IFVVFWCLVLNVFFAKKLFRGMVEKESVTVMPNFGVQLETHYRSGKVIRQFVPVDKLLKS 120

Query: 121 VLLECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCA----GKNKDACS 177
           VLLECVTPVTCYW LSLIIQGEDKLLLVFKELRPP+KM VPIWKAL A      N+DACS
Sbjct: 121 VLLECVTPVTCYWILSLIIQGEDKLLLVFKELRPPLKMXVPIWKALSAATGNNNNRDACS 180

[Close]

BLAST of Carg01173 vs. TAIR10
Match: AT4G35530.1 (phosphatidylinositolglycan-related)

HSP 1 Score: 174.1 bits (440), Expect = 7.6e-44
Identity = 90/182 (49.45%), Postives = 120/182 (65.93%), Query Frame = 0


Query: 1   MAKFSITDWRYGYF--SDSKWQSEAVDIHHVVVLRNRSNGKGF-------LFYILAALAF 60
           M   S+++ RY Y   S SK   EA+DIHHV++  N S+G G+        F +  A + 
Sbjct: 1   MVSLSVSNKRYTYIHESGSKSTREAIDIHHVII--NGSSGTGYARRWGLGFFLVFLASSM 60

Query: 61  CFFILKGQSIFAVLWCWVLNVLFAKKLFKGTVEKESVMVMPNFGVQLETHYTSGKVICRF 120
            F + K      + W  +L+        +  V+KESV+++P FG+QLET Y SGK + RF
Sbjct: 61  YFLLGKDNPARTLSWGCLLSGFLVMLHSRKFVKKESVIILPTFGIQLETQYLSGKTVSRF 120

Query: 121 VPVDKILKPVLLECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCAGKN 174
           +P+DKILKPVL+ECVTP+TCYWSLSL ++GE++L LVFKELRPP+KMLVPIWKALCA   
Sbjct: 121 IPIDKILKPVLVECVTPITCYWSLSLFLRGEEQLTLVFKELRPPLKMLVPIWKALCAAIG 180

[Close]

BLAST of Carg01173 vs. TrEMBL
Match: tr|A0A1S3BKL9|A0A1S3BKL9_CUCME (uncharacterized protein LOC103490645 OS=Cucumis melo OX=3656 GN=LOC103490645 PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 6.3e-77
Identity = 146/180 (81.11%), Postives = 157/180 (87.22%), Query Frame = 0


Query: 1   MAKFSITDWRYGYFSDSKWQSEAVDIHHVVVLRNRSNGKGFLFYILAALAFCFFILKGQS 60
           MAKFSI+D RYGYFSD KW SEAV +HHVVVLRN +  KGFLF + AALAFCFF+LKGQS
Sbjct: 1   MAKFSISDRRYGYFSDCKWPSEAVHVHHVVVLRNTTAEKGFLFCVFAALAFCFFLLKGQS 60

Query: 61  IFAVLWCWVLNVLFAKKLFKGTVEKESVMVMPNFGVQLETHYTSGKVICRFVPVDKILKP 120
           IF  LWC VLNV F KKLFKG+VEKESVMVMPNFGVQLETH+ SGKV+ RFVPVDKILKP
Sbjct: 61  IFVALWCLVLNVFFFKKLFKGSVEKESVMVMPNFGVQLETHFRSGKVLRRFVPVDKILKP 120

Query: 121 VLLECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCAG----KNKDACS 177
           VLLEC+TPVTCYWSLSLI+QGED+LLLVFKELRPPVKMLVPIWKALC      KN DACS
Sbjct: 121 VLLECLTPVTCYWSLSLIVQGEDELLLVFKELRPPVKMLVPIWKALCTATGDDKNGDACS 180

[Close]

BLAST of Carg01173 vs. TrEMBL
Match: tr|A0A0A0L3J5|A0A0A0L3J5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G000720 PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 7.3e-73
Identity = 139/180 (77.22%), Postives = 152/180 (84.44%), Query Frame = 0


Query: 1   MAKFSITDWRYGYFSDSKWQSEAVDIHHVVVLRNRSNGKGFLFYILAALAFCFFILKGQS 60
           MAKFSI+D RYGYFSD KW SEAV +HHVVVLRN +  KGFLF + A LA CFF+LKG+S
Sbjct: 1   MAKFSISDRRYGYFSDCKWPSEAVHVHHVVVLRNTTAEKGFLFCVFAVLALCFFLLKGES 60

Query: 61  IFAVLWCWVLNVLFAKKLFKGTVEKESVMVMPNFGVQLETHYTSGKVICRFVPVDKILKP 120
           IF  LWC VLNV F KKLFKG VEKESV+VMPNFGVQLETH+ SGKVI RFVPV KILKP
Sbjct: 61  IFVALWCLVLNVFFFKKLFKGRVEKESVIVMPNFGVQLETHFRSGKVIRRFVPVGKILKP 120

Query: 121 VLLECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCAG----KNKDACS 177
           VLLEC+TPVTCYWSLSLI++GED+LLLVFKELRPPVKMLVP+WKALC      KN D CS
Sbjct: 121 VLLECLTPVTCYWSLSLIVKGEDELLLVFKELRPPVKMLVPVWKALCTATGDDKNGDDCS 180

[Close]

BLAST of Carg01173 vs. TrEMBL
Match: tr|A0A2K1WUW4|A0A2K1WUW4_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_018G026700v3 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 1.4e-52
Identity = 105/171 (61.40%), Postives = 133/171 (77.78%), Query Frame = 0


Query: 1   MAKFSITDWRYGYFSDSKWQSEAVDIHHVVVLRNRSNGKGFLFY----ILAALAFCFFIL 60
           M +FSI + RYGY  + KW SEA+D+HHV+V   +SNGKGF  +    I+ A A   F++
Sbjct: 1   MTEFSIANRRYGYLHERKWPSEAIDMHHVMV--RKSNGKGFFVFFSALIVLANASYLFLV 60

Query: 61  KGQSIFAVLWCWVLNVLFAKKLFKGTVEKESVMVMPNFGVQLETHYTSGKVICRFVPVDK 120
           K +SI  +LW + L+V   K +F   V KESVMVMP FGVQLETHY SG+++ RFVP+DK
Sbjct: 61  KNKSISVLLWSFFLSVFLVKLMFWKRVMKESVMVMPTFGVQLETHYLSGRIVRRFVPIDK 120

Query: 121 ILKPVLLECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALC 168
           ILKPVLLECV+P+TCYWSLSL+++GE +L+LVFKELRPPVKML+PIWKALC
Sbjct: 121 ILKPVLLECVSPITCYWSLSLLLRGEAELMLVFKELRPPVKMLIPIWKALC 169

[Close]

BLAST of Carg01173 vs. TrEMBL
Match: tr|M5VS39|M5VS39_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G183400 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 7.8e-51
Identity = 107/168 (63.69%), Postives = 128/168 (76.19%), Query Frame = 0


Query: 5   SITDWRYGYFSDSKWQSEAVDIHHVVVLRNRSNGKGFLFY----ILAALAFCFFILKGQS 64
           S T+ RY Y  D KW  EAVD+HH++V   +S  KGF  Y    I+ A AF  F++K +S
Sbjct: 4   SSTNSRYKYLHDCKWPREAVDVHHIIV--RKSGAKGFFVYFFALIILATAFYLFLVKEKS 63

Query: 65  IFAVLWCWVLNVLFAKKLFKGTVEKESVMVMPNFGVQLETHYTSGKVICRFVPVDKILKP 124
           +  VLW  +L+  F  KL + +VEKESV+VMP FGVQLETHY SGK+I RFVP+DKILKP
Sbjct: 64  VIIVLWSLLLDA-FLVKLLRKSVEKESVVVMPAFGVQLETHYVSGKIIRRFVPMDKILKP 123

Query: 125 VLLECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCA 169
           VLLECVTPVTCYWSLS I+ GE +L+LVFKELRPP+KMLVPIWKALCA
Sbjct: 124 VLLECVTPVTCYWSLSFIVHGEAELVLVFKELRPPMKMLVPIWKALCA 168

[Close]

BLAST of Carg01173 vs. TrEMBL
Match: tr|A0A067KP52|A0A067KP52_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_07155 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 8.6e-50
Identity = 102/180 (56.67%), Postives = 127/180 (70.56%), Query Frame = 0


Query: 1   MAKFSITDWRYGYFSDSKWQSEAVDIHHVVVLRNRSNGKGFLFYILAAL----AFCFFIL 60
           MA  SITD RY Y  D KW SEA+D+HH+VV   +S  K F  Y+ A +    A C F++
Sbjct: 1   MADLSITDRRYTYIHDCKWPSEAIDVHHIVV--RKSKTKSFFVYLSAFVLLPNALCLFLV 60

Query: 61  KGQSIFAVLWCWVLNVLFAKKLFKGTVEKESVMVMPNFGVQLETHYTSGKVICRFVPVDK 120
           K  SI  + W ++L+ +  K +    V KESV+VMP FGVQ ETHYTSG+++  FVP+ K
Sbjct: 61  KDISINILFWSFILSAILVKLIIWKPVVKESVVVMPAFGVQFETHYTSGRIVRHFVPIGK 120

Query: 121 ILKPVLLECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCAGKNKDACS 177
           ILKPVLLECVTP+TCYWSLSLI+ GE +L+LVFKEL PPVKMLVPIWKALC+    +  S
Sbjct: 121 ILKPVLLECVTPITCYWSLSLILHGEGELMLVFKELYPPVKMLVPIWKALCSATGNEESS 178

The following BLAST results are available for this feature:

BLAST of Carg01173 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022946831.1	2.4e-96	98.30	uncharacterized protein LOC111450501 [Cucurbita moschata]	[more]
XP_022971392.1	5.4e-96	98.86	uncharacterized protein LOC111470129 [Cucurbita maxima]	[more]
XP_023539514.1	1.2e-95	97.73	uncharacterized protein LOC111800156 [Cucurbita pepo subsp. pepo]	[more]
XP_008448466.1	9.6e-77	81.11	PREDICTED: uncharacterized protein LOC103490645 [Cucumis melo] >XP_008448467.1 P...	[more]
XP_022158291.1	2.2e-73	79.44	uncharacterized protein LOC111024811 isoform X1 [Momordica charantia] >XP_022158...	[more]

BLAST of Carg01173 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G35530.1	7.6e-44	49.45	phosphatidylinositolglycan-related	[more]

BLAST of Carg01173 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg01173 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BKL9\|A0A1S3BKL9_CUCME	6.3e-77	81.11	uncharacterized protein LOC103490645 OS=Cucumis melo OX=3656 GN=LOC103490645 PE=...	[more]
tr\|A0A0A0L3J5\|A0A0A0L3J5_CUCSA	7.3e-73	77.22	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G000720 PE=4 SV=1	[more]
tr\|A0A2K1WUW4\|A0A2K1WUW4_POPTR	1.4e-52	61.40	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_018G026700v3 PE=...	[more]
tr\|M5VS39\|M5VS39_PRUPE	7.8e-51	63.69	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G183400 PE=4 SV=1	[more]
tr\|A0A067KP52\|A0A067KP52_JATCU	8.6e-50	56.67	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_07155 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0017176	phosphatidylinositol N-acetylglucosaminyltransferase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR019328	GPI-GlcNAc_Trfase_PIG-H_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0017176	phosphatidylinositol N-acetylglucosaminyltransferase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg01173-RA	Carg01173-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019328	GPI-GlcNAc transferase complex, PIG-H component, conserved domain	PFAM	PF10181	PIG-H	coord: 87..150 e-value: 8.9E-14 score: 51.0
None	No IPR available	PANTHER	PTHR15231	PHOSPHATIDYLINOSITOL GLYCAN, CLASS H	coord: 21..169

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg01173	Cla008951	Watermelon (97103) v1	carwmB0149
Carg01173	Csa3G000720	Cucumber (Chinese Long) v2	carcuB0173
Carg01173	MELO3C013716	Melon (DHL92) v3.5.1	carmeB0165
Carg01173	ClCG10G000190	Watermelon (Charleston Gray)	carwcgB0148
Carg01173	CSPI03G00220	Wild cucumber (PI 183967)	carcpiB0179
Carg01173	Cucsa.323170	Cucumber (Gy14) v1	carcgyB0197
Carg01173	CmaCh06G001620	Cucurbita maxima (Rimu)	carcmaB0216
Carg01173	CmoCh06G001520	Cucurbita moschata (Rifu)	carcmoB0227
Carg01173	Lsi07G010470	Bottle gourd (USVL1VR-Ls)	carlsiB146
Carg01173	Cp4.1LG08g12830	Cucurbita pepo (Zucchini)	carcpeB0233
Carg01173	CsGy3G000180	Cucumber (Gy14) v2	carcgybB0168
Carg01173	MELO3C013716.2	Melon (DHL92) v3.6.1	carmedB0166
Carg01173	CsaV3_3G000210	Cucumber (Chinese Long) v3	carcucB0179
Carg01173	Cla97C10G184730	Watermelon (97103) v2	carwmbB0160

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg01173	Silver-seed gourd	carcarB189
Carg01173	Silver-seed gourd	carcarB191
Carg01173	Cucurbita maxima (Rimu)	carcmaB0205
Carg01173	Cucurbita moschata (Rifu)	carcmoB0216
Carg01173	Cucurbita pepo (Zucchini)	carcpeB0223
Carg01173	Wax gourd	carwgoB0201