Carg01003 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAACTCGGGAACTGGGCTCACAACCAGCTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGACGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGACGAAGAAGAAGAAGAAGAAGAAGAACCAGTGCTTTCTTCACCACTTCTCATTTTGGCACTTCCAATTCAATCCTAGGTTCAAGAGGAAAAAACTACCAGGTTTCTCTCATTTCAAGCGGAATAGCAGAGGTAGACTTCCATTTTCGGGTAGGATTTTAAGAACACTCTGTTTTGTCCCGCATTTCGCTTCGTCAAATGCTGTCAAGCAAGAAGAATGCTGGCTTTTTCTTTGTTTTATGCTCTCTTGGTTTTCTGTTCTAGTTGCTGAAAGATCTGAGTTCGCTTGGTGTTGCATCCGAGTATTGCTTAATATTGTGTATTTTTGGAAGTTATCATCGTGTTTTTCGGATAGGTCTGCTTTTGATGATGCAAAACTGTTTGAAGATTTGCTTGTTTTTTCCCTTGAAGCTTATTATTCCTCGCTGGCAAGTTTGATGTTGTGTTTCTGCTTCTTATTTTTTTTGTATGTTGAATGCTTTATATTCTCAGATCTGTGAGTTCAATGCGTTTGAAGCTTCAGAGCTCTTTTTTCGTTTGGATTTTCAGTTTGTTTACCCAACTTGGAGACTCTGAAAGCACTTCTTCACCATTCTCCATTAATGTTTTTGCTTCTTCCTCGGATGTGTGTTTTTTATTCAATCTACTTTTTAGGATCCACTGTTGAGTACATTGCTTTAGAGTTTGTTTAACTTTATGCGAAATGACATTTACTGAAAGAGAAATACTGCTTTTCCCAAAATCAAATACATATCCTAAAGTGAGTATGTGTTTTTCCATATCTGAGTGATTCTGGAAATTACATACTCAAAGTATTGATAATCTTCCTCTGAAGAACTGTGCGAAATACACTTCATAAAATACAGTAATTTCATGTCATAATTCTTTTGAATGAATTTCAGGGGTCCATTTGGTCACTGTAGGGCAAAAAGGAGAAGCAAAAGGGAGAAAGTAAAGGGTAAAAAGTCTGAAATATGTTTTGTAGCATAATGATAAATATATGCTTTTCTTTCTTGCAGTTTTTTATTTACTTTATTATTTGAAAAAAGGTTGAAGTAAAATTATGCTATGGTTTGGCTTTTGTTGGTTGTAGTGGGGTTAGATTTTTGGGGTTTCTTTGAAGGGATTGTATTGTGTGTTGTCTTTTTTTGTTAAGTTTGGTACTGATGTTGATCTATGGTAGTAAGGTTGCTATCCTTTGTGAATGATTTTTGTACAAACATATATTGTCCTCCATTTTCTGTTTATTTCTCAGTCAAGATTCTCTCTGCTGTTTCAGGTATTGTGGGTCAGACGACTCTAGAACTCAATTATTTTATTACCTGCTTGATTATTTTTCTAAAGGAAACACACAAGCATGCAGACCCCAAAAGCAAAGTAAGATTATCTTTAGTTTTTGAATTGCTTAGCTAAGATTATCTTTAGTTTTTGAATTGCTTAGCTGCTTGCTTCCTGTCAGCTTAATCAAACGGTTTTCTTTTGTTCATCTTTTGACTCCCCACAAACCAGAGCAGAACTCCCCACTTTCATTCTTGAGCTCTGTTTGTTTCTTACTGTAATCTTGTTATGTATGTCTTTTTTCAAGATCCAACATGGTCTAAGAACAAAAATGTAGTAGGGTCAGGTGGATGTCTTCTAAGAAGGGTCGAGTTACGTGCAAACAGATATGCATATATATAAACTGTTCAAGAAGCAATCATCTTAGACTCTCTGCTTGTATGTAGCTACGCCATATTGTCAATGTACTGGCTGATTTTTTTTTTTTTTTTTTTTTTTGTTGGGTTAGATGGTAATTCTCAGTTTTGATTTTTCAAGTTGGTGATTGCAAAAAGAGGGAGAGGGTAAGAAGAAGATGAATAAGACTAGTAGCACATAGATACAGTAATTTAGTATATACTAAACGTGTTTGAAAGCATATGATTTTTAGAATTGTTCTTTTCATTGCTGGGAATGCAAATGGGAATATGGAATGTAGTTGATACGGTAGTTTGTATGCATCATCATAGTTTCGAGGAGGGAATTGTTGAACCTTATGAGTGTGAATGATTTTCCTAATCTGTTTGAACCCATTTTTTAGAACCCTTTTCTTGTACTTTTTTTAAAACTTAACTTGTTCTTGAAATTCATGTAAAAAGTAACAAGAAAATTTATTGGTAGAAATCAGAAAGTTATCTAAGGGGCTTAAAGAGTTGAACTAATATTATGGCTAGATCTTACAGTTGTTTGAATTGGATTGCAGAGCTAGCTCCTCAGAGGTAACTCAAAGAAAATCCCCCAGAACACCCCGAACCGCTCGTCAACTTAAAACTCCAGCCATAGATCCTGATTCCGTTTCCACTTCTCCACTTGCTGCTAGTAAGACGCCTAAAGAGAGAAGTCCAAGGGTAGTGACTGACCGCAAGTCACCACGATGTCTGGCCGCTGAGGTACTTGTTTTATATTTTACGACTAACTATATAGAGATTCACATCAGTTATGTTAAAAGTTTTGTCTCAAGACTTTTATTTTCAATGTCTGCCCGCAACTCTATTTTCAATTGAGTAACTATTAAGCCTATGAAATTAAAAAAATATCGAAAAAGTCGAGATCTATTGAAAACAAAAATCTAGTAACTTATTATAAGTTCATAAACTTCTTAAAATAGAAAGGGAGAGATTAAACTCAGTAATTTTGCTTTGGTCAATGTTGGTAACATTTTTCTCACTTCAGAGTAAAGGGTCCAGTAAAGTGGTTGAATTGGAATCACGGATTTCTCAACTCCAGGAGGAGCTGAAGAAAACAAGTGATCAACTGAGCGCATCTGAATCACACAAAAAGCAAGCCCAACAGGAAGCAGAAGAAGTAAAGAAACAACTATCAGACATGTCTGCAAAGCTTGAAGAATCCCAACAGCAGGTGCTTGATCTCTCAGCTTCTGAGGAAGATCGTGTTCAAGAACTGCACAAACTTTCTCAAGATCGAGATCGAGCATGGGAATCCGAGCTCGAAGCTGTTCAGAAGCAGCACGCTATGGATGCTGCTGCATTGGCCTCCGCCATGAATGAAGTTCAGAGGCTCAAGGTCCAGCTGAACATGGTGTCTGAATCCGGCGAAACCCGAAGTAAGCTCGCCGAGTCTGCCCAAGTTGAGATGGATTATCTAAGAACACAGCTCTCAGAGACTCTCTCCCTTGTTGAAAAACTGAAAAACGAGCTTAGTTACTGCAGAGAATCTGAAGCTCAAGCCCTCAACATCGCAAGAAAAAACCAAAATCAATTTGAAACAGCCAAAGCAGCTGTGGAAAAGCTTCAATCAGATGGAATCAAAGCCGTTGAAGTTTACAACTCTTTGTCATTAGAATTGGAGCAATCAAAAGCTCATATTCAATCATTGGAGGATGATATCAGCAAGACTCAAAAAGGCTCAGATTCAATCCCGGGCAGTAAGAATGAAATCAATGACATTAAAACTGAGCTTGCCGCTATGAGATTGGAATCAGATAAATCAAAATCTGCATTAAGTGCAGCTGAGACAAGGTTTGAAGAGGAATCTGTTCGTACAGCCATGCAAATTAGAATTGCCCATGAACTTGTGGAACAAATGAAGGTAGAGTCATGTCAGAAAGAGGAAGAATTAGATGCAGAACTCAAGGAAGCCAGAAAAGACATTGAACAATTGAGAGAAGACCTTAAAGAAAAAGAAACACAATTGTGCAGTGTCGTGGAGGTAAACAAGGACTCTGAACTAGCAATGGAGCTAAAGAAGCTGGAGGCCGACATGGCAGAGTTAAAGACCAAACTGTTGGATAAGGAGACAGAATTGCAAAGTACATCCGAGGAAAACAATGCACTTAAAAACAAGATCCAAAACATAGAAATGGAAATGAATAGAATCAACGATGAAGCAGTCACTTTGGCAGAAACAACCAAAGCTGCAGAGCAAGAGGCAGATAAAAATGGCCAAAGAGCGGCGCGAGCCGCCGAGCAGTTGGATGCTGCACAGGCTGCAAATGCCGAAATGGAGGCTGAGCTAAGGAGGCTAAAGGTGCAAACAGACCAGTGGAGGAAAGCAGCTGAGGCTGCAGCTGCTATACTGTCAACCGGCAACAATGGGAAGCTTGTTGATAGAATAGTTTCATTGGAGAACAATTATCCTCTAGGCTCGCCGTACTCGGAAGACCTCGACGACGAGTCGCCGAAGAAGAAGAACGGAAATATGTTGAAGAAGATAGGAGTTTTGTGGAGAAAAAACCATAAGTAA AAACTCGGGAACTGGGCTCACAACCAGCTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGACGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGACGAAGAAGAAGAAGAAGAAGAAGAACCAGTGCTTTCTTCACCACTTCTCATTTTGGCACTTCCAATTCAATCCTAGGTTCAAGAGGAAAAAACTACCAGGTTTCTCTCATTTCAAGCGGAATAGCAGAGGTAGACTTCCATTTTCGGTTTGTTTACCCAACTTGGAGACTCTGAAAGCACTTCTTCACCATTCTCCATTAATGGGTCCATTTGGTCACTGTAGGGCAAAAAGGAGAAGCAAAAGGGAGAAAGTAAAGGGTATTGTGGGTCAGACGACTCTAGAACTCAATTATTTTATTACCTGCTTGATTATTTTTCTAAAGGAAACACACAAGCATGCAGACCCCAAAAGCAAAGTAACTCAAAGAAAATCCCCCAGAACACCCCGAACCGCTCGTCAACTTAAAACTCCAGCCATAGATCCTGATTCCGTTTCCACTTCTCCACTTGCTGCTAGTAAGACGCCTAAAGAGAGAAGTCCAAGGGTAGTGACTGACCGCAAGTCACCACGATGTCTGGCCGCTGAGCTTGCCGCTATGAGATTGGAATCAGATAAATCAAAATCTGCATTAAGTGCAGCTGAGACAAGGTTTGAAGAGGAATCTGTTCGTACAGCCATGCAAATTAGAATTGCCCATGAACTTGTGGAACAAATGAAGGTAGAGTCATGTCAGAAAGAGGAAGAATTAGATGCAGAACTCAAGGAAGCCAGAAAAGACATTGAACAATTGAGAGAAGACCTTAAAGAAAAAGAAACACAATTGTGCAGTGTCGTGGAGGTAAACAAGGACTCTGAACTAGCAATGGAGCTAAAGAAGCTGGAGGCCGACATGGCAGAGTTAAAGACCAAACTGTTGGATAAGGAGACAGAATTGCAAAGTACATCCGAGGAAAACAATGCACTTAAAAACAAGATCCAAAACATAGAAATGGAAATGAATAGAATCAACGATGAAGCAGTCACTTTGGCAGAAACAACCAAAGCTGCAGAGCAAGAGGCAGATAAAAATGGCCAAAGAGCGGCGCGAGCCGCCGAGCAGTTGGATGCTGCACAGGCTGCAAATGCCGAAATGGAGGCTGAGCTAAGGAGGCTAAAGGTGCAAACAGACCAGTGGAGGAAAGCAGCTGAGGCTGCAGCTGCTATACTGTCAACCGGCAACAATGGGAAGCTTGTTGATAGAATAGTTTCATTGGAGAACAATTATCCTCTAGGCTCGCCGTACTCGGAAGACCTCGACGACGAGTCGCCGAAGAAGAAGAACGGAAATATGTTGAAGAAGATAGGAGTTTTGTGGAGAAAAAACCATAAGTAA AAACTCGGGAACTGGGCTCACAACCAGCTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGACGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGACGAAGAAGAAGAAGAAGAAGAAGAACCAGTGCTTTCTTCACCACTTCTCATTTTGGCACTTCCAATTCAATCCTAGGTTCAAGAGGAAAAAACTACCAGGTTTCTCTCATTTCAAGCGGAATAGCAGAGGTAGACTTCCATTTTCGGTTTGTTTACCCAACTTGGAGACTCTGAAAGCACTTCTTCACCATTCTCCATTAATGGGTCCATTTGGTCACTGTAGGGCAAAAAGGAGAAGCAAAAGGGAGAAAGTAAAGGGTATTGTGGGTCAGACGACTCTAGAACTCAATTATTTTATTACCTGCTTGATTATTTTTCTAAAGGAAACACACAAGCATGCAGACCCCAAAAGCAAAGTAACTCAAAGAAAATCCCCCAGAACACCCCGAACCGCTCGTCAACTTAAAACTCCAGCCATAGATCCTGATTCCGTTTCCACTTCTCCACTTGCTGCTAGTAAGACGCCTAAAGAGAGAAGTCCAAGGGTAGTGACTGACCGCAAGTCACCACGATGTCTGGCCGCTGAGCTTGCCGCTATGAGATTGGAATCAGATAAATCAAAATCTGCATTAAGTGCAGCTGAGACAAGGTTTGAAGAGGAATCTGTTCGTACAGCCATGCAAATTAGAATTGCCCATGAACTTGTGGAACAAATGAAGGTAGAGTCATGTCAGAAAGAGGAAGAATTAGATGCAGAACTCAAGGAAGCCAGAAAAGACATTGAACAATTGAGAGAAGACCTTAAAGAAAAAGAAACACAATTGTGCAGTGTCGTGGAGGTAAACAAGGACTCTGAACTAGCAATGGAGCTAAAGAAGCTGGAGGCCGACATGGCAGAGTTAAAGACCAAACTGTTGGATAAGGAGACAGAATTGCAAAGTACATCCGAGGAAAACAATGCACTTAAAAACAAGATCCAAAACATAGAAATGGAAATGAATAGAATCAACGATGAAGCAGTCACTTTGGCAGAAACAACCAAAGCTGCAGAGCAAGAGGCAGATAAAAATGGCCAAAGAGCGGCGCGAGCCGCCGAGCAGTTGGATGCTGCACAGGCTGCAAATGCCGAAATGGAGGCTGAGCTAAGGAGGCTAAAGGTGCAAACAGACCAGTGGAGGAAAGCAGCTGAGGCTGCAGCTGCTATACTGTCAACCGGCAACAATGGGAAGCTTGTTGATAGAATAGTTTCATTGGAGAACAATTATCCTCTAGGCTCGCCGTACTCGGAAGACCTCGACGACGAGTCGCCGAAGAAGAAGAACGGAAATATGTTGAAGAAGATAGGAGTTTTGTGGAGAAAAAACCATAAGTAA KLGNWAHNQLKKKKKKKKKKKTKKKKKKKKKKKTKKKKKKKNQCFLHHFSFWHFQFNPRFKRKKLPGFSHFKRNSRGRLPFSVCLPNLETLKALLHHSPLMGPFGHCRAKRRSKREKVKGIVGQTTLELNYFITCLIIFLKETHKHADPKSKVTQRKSPRTPRTARQLKTPAIDPDSVSTSPLAASKTPKERSPRVVTDRKSPRCLAAELAAMRLESDKSKSALSAAETRFEEESVRTAMQIRIAHELVEQMKVESCQKEEELDAELKEARKDIEQLREDLKEKETQLCSVVEVNKDSELAMELKKLEADMAELKTKLLDKETELQSTSEENNALKNKIQNIEMEMNRINDEAVTLAETTKAAEQEADKNGQRAARAAEQLDAAQAANAEMEAELRRLKVQTDQWRKAAEAAAAILSTGNNGKLVDRIVSLENNYPLGSPYSEDLDDESPKKKNGNMLKKIGVLWRKNHK
BLAST of Carg01003 vs. NCBI nr
Match: XP_023540342.1 (interactor of constitutive active ROPs 2, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023540343.1 interactor of constitutive active ROPs 2, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023540344.1 interactor of constitutive active ROPs 2, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 272.3 bits (695), Expect = 3.0e-69 Identity = 317/578 (54.84%), Postives = 321/578 (55.54%), Query Frame = 0
BLAST of Carg01003 vs. NCBI nr
Match: XP_023005842.1 (interactor of constitutive active ROPs 2, chloroplastic-like [Cucurbita maxima] >XP_023005844.1 interactor of constitutive active ROPs 2, chloroplastic-like [Cucurbita maxima] >XP_023005845.1 interactor of constitutive active ROPs 2, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 268.9 bits (686), Expect = 3.4e-68 Identity = 256/265 (96.60%), Postives = 260/265 (98.11%), Query Frame = 0
BLAST of Carg01003 vs. NCBI nr
Match: XP_022947737.1 (interactor of constitutive active ROPs 2, chloroplastic-like [Cucurbita moschata] >XP_022947745.1 interactor of constitutive active ROPs 2, chloroplastic-like [Cucurbita moschata] >XP_022947754.1 interactor of constitutive active ROPs 2, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 268.1 bits (684), Expect = 5.7e-68 Identity = 298/577 (51.65%), Postives = 302/577 (52.34%), Query Frame = 0
BLAST of Carg01003 vs. NCBI nr
Match: XP_023528745.1 (interactor of constitutive active ROPs 2, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 199.9 bits (507), Expect = 1.9e-47 Identity = 141/323 (43.65%), Postives = 165/323 (51.08%), Query Frame = 0
BLAST of Carg01003 vs. NCBI nr
Match: XP_022983518.1 (interactor of constitutive active ROPs 2, chloroplastic [Cucurbita maxima]) HSP 1 Score: 180.6 bits (457), Expect = 1.2e-41 Identity = 133/324 (41.05%), Postives = 156/324 (48.15%), Query Frame = 0
BLAST of Carg01003 vs. TAIR10
Match: AT5G60210.1 (ROP interactive partner 5) HSP 1 Score: 107.8 bits (268), Expect = 1.8e-23 Identity = 56/85 (65.88%), Postives = 65/85 (76.47%), Query Frame = 0
HSP 2 Score: 38.5 bits (88), Expect = 1.3e-02 Identity = 22/49 (44.90%), Postives = 35/49 (71.43%), Query Frame = 0
BLAST of Carg01003 vs. TAIR10
Match: AT2G37080.1 (ROP interactive partner 3) HSP 1 Score: 65.1 bits (157), Expect = 1.3e-10 Identity = 122/305 (40.00%), Postives = 148/305 (48.52%), Query Frame = 0
BLAST of Carg01003 vs. TAIR10
Match: AT1G78430.1 (ROP interactive partner 2) HSP 1 Score: 52.0 bits (123), Expect = 1.2e-06 Identity = 33/73 (45.21%), Postives = 48/73 (65.75%), Query Frame = 0
BLAST of Carg01003 vs. TAIR10
Match: AT3G53350.1 (ROP interactive partner 4) HSP 1 Score: 52.0 bits (123), Expect = 1.2e-06 Identity = 38/85 (44.71%), Postives = 48/85 (56.47%), Query Frame = 0
BLAST of Carg01003 vs. Swiss-Prot
Match: sp|Q9LSS5|ICR3_ARATH (Interactor of constitutive active ROPs 3 OS=Arabidopsis thaliana OX=3702 GN=ICR3 PE=1 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 3.2e-22 Identity = 56/85 (65.88%), Postives = 65/85 (76.47%), Query Frame = 0
BLAST of Carg01003 vs. Swiss-Prot
Match: sp|Q9ZQC5|ICR2_ARATH (Interactor of constitutive active ROPs 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ICR2 PE=1 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 2.4e-09 Identity = 122/305 (40.00%), Postives = 148/305 (48.52%), Query Frame = 0
BLAST of Carg01003 vs. Swiss-Prot
Match: sp|Q9M9F9|ICR4_ARATH (Interactor of constitutive active ROPs 4 OS=Arabidopsis thaliana OX=3702 GN=ICR4 PE=1 SV=2) HSP 1 Score: 52.0 bits (123), Expect = 2.1e-05 Identity = 33/73 (45.21%), Postives = 48/73 (65.75%), Query Frame = 0
BLAST of Carg01003 vs. Swiss-Prot
Match: sp|Q8VYU8|ICR5_ARATH (Interactor of constitutive active ROPs 5 OS=Arabidopsis thaliana OX=3702 GN=ICR5 PE=1 SV=2) HSP 1 Score: 52.0 bits (123), Expect = 2.1e-05 Identity = 38/85 (44.71%), Postives = 48/85 (56.47%), Query Frame = 0
BLAST of Carg01003 vs. TrEMBL
Match: tr|A0A0A0LDX4|A0A0A0LDX4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G736850 PE=4 SV=1) HSP 1 Score: 178.7 bits (452), Expect = 3.0e-41 Identity = 216/637 (33.91%), Postives = 234/637 (36.73%), Query Frame = 0
BLAST of Carg01003 vs. TrEMBL
Match: tr|A0A1S3B5P5|A0A1S3B5P5_CUCME (LOW QUALITY PROTEIN: interactor of constitutive active ROPs 3-like OS=Cucumis melo OX=3656 GN=LOC103486455 PE=4 SV=1) HSP 1 Score: 170.2 bits (430), Expect = 1.1e-38 Identity = 250/662 (37.76%), Postives = 269/662 (40.63%), Query Frame = 0
BLAST of Carg01003 vs. TrEMBL
Match: tr|A0A2N9IKB8|A0A2N9IKB8_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS52626 PE=4 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 1.4e-33 Identity = 109/290 (37.59%), Postives = 143/290 (49.31%), Query Frame = 0
BLAST of Carg01003 vs. TrEMBL
Match: tr|A0A251NV17|A0A251NV17_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G241200 PE=4 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 2.0e-32 Identity = 111/291 (38.14%), Postives = 139/291 (47.77%), Query Frame = 0
BLAST of Carg01003 vs. TrEMBL
Match: tr|A0A251NV22|A0A251NV22_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G241200 PE=4 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 2.0e-32 Identity = 111/291 (38.14%), Postives = 139/291 (47.77%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |