Carg00865 (gene) Silver-seed gourd

NameCarg00865
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionDof zinc finger protein like
LocationCucurbita_argyrosperma_scaffold_014 : 1864859 .. 1865569 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTTCCGACGTCGGTGACCACCGCAAGACTGCTTCCAAGCTCCTCGGATCCGGTGGGGGTGTCTGCCCTCCATCGGAGCAAGAGCACCTCCCTTGCCCACGCTGTGATTCAACTAATACTAAGTTCTGTTATTACAACAACTATAATTTCTCTCAGCCCAGGCACTTTTGTAAGTCCTGCCGTCGTTATTGGACTCATGGTGGGACCCTTCGCGACATTCCCGTCGGTGGTGGTAGCCGGAAGAATGCTAAACGCTCTCGTACTTGCTTTCCCGCGGCTACGGCGGTTGTCTCTTCTTCATCTGGGTCGTTGGGTTACTCTGCTTCTCAACTGGATCATCATTCGTTACCGGCGACTTCGATGCTGCTGCCTCTTGTCAGTGGCCACGGCGGTGGCGGAGGAGACTCGAAGGCGGCCGGTGGGAATATGTGTGGGAGCTTTACGTCGTTGTTGAACACACACGCTCCTGGGTTTTGGAGTTTGGGTGGGTTCGGGCTCGGGCTCGGGTCGGGGTTCGAGGACCTGGGCTATGGGGCGGCTAGTTCTAGGGTGTCTTGGCCGTTTCTCGGACTGGGAGAAAGCGGGCACGGCGGAGCGCCGAATGCGTGGCAGTTTGAGAATGGAGACGCCGCCGGATTTGTAGGGGCTGCTGATTGCTTGTCTTGGCCTGAATTGGCAATTTCCACTCCGGGAAATGGGCTTAAATGA

mRNA sequence

ATGCCTTCCGACGTCGGTGACCACCGCAAGACTGCTTCCAAGCTCCTCGGATCCGGTGGGGGTGTCTGCCCTCCATCGGAGCAAGAGCACCTCCCTTGCCCACGCTGTGATTCAACTAATACTAAGTTCTGTTATTACAACAACTATAATTTCTCTCAGCCCAGGCACTTTTGTAAGTCCTGCCGTCGTTATTGGACTCATGGTGGGACCCTTCGCGACATTCCCGTCGGTGGTGGTAGCCGGAAGAATGCTAAACGCTCTCGTACTTGCTTTCCCGCGGCTACGGCGGTTGTCTCTTCTTCATCTGGGTCGTTGGGTTACTCTGCTTCTCAACTGGATCATCATTCGTTACCGGCGACTTCGATGCTGCTGCCTCTTGTCAGTGGCCACGGCGGTGGCGGAGGAGACTCGAAGGCGGCCGGTGGGAATATGTGTGGGAGCTTTACGTCGTTGTTGAACACACACGCTCCTGGGTTTTGGAGTTTGGGTGGGTTCGGGCTCGGGCTCGGGTCGGGGTTCGAGGACCTGGGCTATGGGGCGGCTAGTTCTAGGGTGTCTTGGCCGTTTCTCGGACTGGGAGAAAGCGGGCACGGCGGAGCGCCGAATGCGTGGCAGTTTGAGAATGGAGACGCCGCCGGATTTGTAGGGGCTGCTGATTGCTTGTCTTGGCCTGAATTGGCAATTTCCACTCCGGGAAATGGGCTTAAATGA

Coding sequence (CDS)

ATGCCTTCCGACGTCGGTGACCACCGCAAGACTGCTTCCAAGCTCCTCGGATCCGGTGGGGGTGTCTGCCCTCCATCGGAGCAAGAGCACCTCCCTTGCCCACGCTGTGATTCAACTAATACTAAGTTCTGTTATTACAACAACTATAATTTCTCTCAGCCCAGGCACTTTTGTAAGTCCTGCCGTCGTTATTGGACTCATGGTGGGACCCTTCGCGACATTCCCGTCGGTGGTGGTAGCCGGAAGAATGCTAAACGCTCTCGTACTTGCTTTCCCGCGGCTACGGCGGTTGTCTCTTCTTCATCTGGGTCGTTGGGTTACTCTGCTTCTCAACTGGATCATCATTCGTTACCGGCGACTTCGATGCTGCTGCCTCTTGTCAGTGGCCACGGCGGTGGCGGAGGAGACTCGAAGGCGGCCGGTGGGAATATGTGTGGGAGCTTTACGTCGTTGTTGAACACACACGCTCCTGGGTTTTGGAGTTTGGGTGGGTTCGGGCTCGGGCTCGGGTCGGGGTTCGAGGACCTGGGCTATGGGGCGGCTAGTTCTAGGGTGTCTTGGCCGTTTCTCGGACTGGGAGAAAGCGGGCACGGCGGAGCGCCGAATGCGTGGCAGTTTGAGAATGGAGACGCCGCCGGATTTGTAGGGGCTGCTGATTGCTTGTCTTGGCCTGAATTGGCAATTTCCACTCCGGGAAATGGGCTTAAATGA

Protein sequence

MPSDVGDHRKTASKLLGSGGGVCPPSEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGGSRKNAKRSRTCFPAATAVVSSSSGSLGYSASQLDHHSLPATSMLLPLVSGHGGGGGDSKAAGGNMCGSFTSLLNTHAPGFWSLGGFGLGLGSGFEDLGYGAASSRVSWPFLGLGESGHGGAPNAWQFENGDAAGFVGAADCLSWPELAISTPGNGLK
BLAST of Carg00865 vs. NCBI nr
Match: XP_023544852.1 (dof zinc finger protein DOF3.4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 472.6 bits (1215), Expect = 7.7e-130
Identity = 224/236 (94.92%), Postives = 226/236 (95.76%), Query Frame = 0

Query: 1   MPSDVGDHRKTASKLLGSGGGVCPPSEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKS 60
           MPSDVGDHRKTASKLLGSGGGVCPPSEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKS
Sbjct: 1   MPSDVGDHRKTASKLLGSGGGVCPPSEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKS 60

Query: 61  CRRYWTHGGTLRDIPVGGGSRKNAKRSRTCFPAATAVVSSSSGSLGYSASQLDHHSLPAT 120
           CRRYWTHGGTLRDIPVGGGSRKNAKRSRTCFPAATAVVSSSSGSLGYSASQLDHHSLPAT
Sbjct: 61  CRRYWTHGGTLRDIPVGGGSRKNAKRSRTCFPAATAVVSSSSGSLGYSASQLDHHSLPAT 120

Query: 121 SMLLPLVSGHGXXXXXXXXXXGNMCGSFTSLLNTHAPGFWSLGGFGLGLGSGFEDLGYGA 180
           SMLLPLVSGHG          GNMCGSFTSLLNTHAPGFWSLGGFGLGLGSGFEDLGYGA
Sbjct: 121 SMLLPLVSGHGGGGGDLKAASGNMCGSFTSLLNTHAPGFWSLGGFGLGLGSGFEDLGYGA 180

Query: 181 ASSRVSWPFLGLGESGHGGAPNAWQFENGDAAGFVGAADCLSWPELAISTPGNGLK 237
           ASSRV+WPFLGLGESGHGGAP+AWQFENGDAAGFVGAADCLSWPELAISTPGNGLK
Sbjct: 181 ASSRVAWPFLGLGESGHGGAPSAWQFENGDAAGFVGAADCLSWPELAISTPGNGLK 236

BLAST of Carg00865 vs. NCBI nr
Match: XP_022950525.1 (dof zinc finger protein DOF3.4-like [Cucurbita moschata])

HSP 1 Score: 467.2 bits (1201), Expect = 3.2e-128
Identity = 232/236 (98.31%), Postives = 233/236 (98.73%), Query Frame = 0

Query: 1   MPSDVGDHRKTASKLLGSGGGVCPPSEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKS 60
           MPSDVGDHRKTASKLLGSGGGVCPPSEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKS
Sbjct: 1   MPSDVGDHRKTASKLLGSGGGVCPPSEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKS 60

Query: 61  CRRYWTHGGTLRDIPVGGGSRKNAKRSRTCFPAATAVVSSSSGSLGYSASQLDHHSLPAT 120
           CRRYWTHGGTLRDIPVGGGSRKNAKRSRTCFPAATAVVSSSSGS GYSASQLDHHSLPAT
Sbjct: 61  CRRYWTHGGTLRDIPVGGGSRKNAKRSRTCFPAATAVVSSSSGSFGYSASQLDHHSLPAT 120

Query: 121 SMLLPLVSGHGXXXXXXXXXXGNMCGSFTSLLNTHAPGFWSLGGFGLGLGSGFEDLGYGA 180
           SMLLPLVSGH XXXXXXXXXXGNMCGSFTSLLNTHA GFWSLGGFGLGLGSGFEDLGYGA
Sbjct: 121 SMLLPLVSGHXXXXXXXXXXXGNMCGSFTSLLNTHASGFWSLGGFGLGLGSGFEDLGYGA 180

Query: 181 ASSRVSWPFLGLGESGHGGAPNAWQFENGDAAGFVGAADCLSWPELAISTPGNGLK 237
           ASSRV+WPFLGLGESGHGGAPNAWQFENGDAAGFVGAADCLSWPELAISTPGNGLK
Sbjct: 181 ASSRVAWPFLGLGESGHGGAPNAWQFENGDAAGFVGAADCLSWPELAISTPGNGLK 236

BLAST of Carg00865 vs. NCBI nr
Match: XP_022979126.1 (dof zinc finger protein DOF3.4-like [Cucurbita maxima])

HSP 1 Score: 466.5 bits (1199), Expect = 5.5e-128
Identity = 219/236 (92.80%), Postives = 222/236 (94.07%), Query Frame = 0

Query: 1   MPSDVGDHRKTASKLLGSGGGVCPPSEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKS 60
           MPSD GDHRKTASKLLGSGGGVCPPSEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKS
Sbjct: 1   MPSDAGDHRKTASKLLGSGGGVCPPSEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKS 60

Query: 61  CRRYWTHGGTLRDIPVGGGSRKNAKRSRTCFPAATAVVSSSSGSLGYSASQLDHHSLPAT 120
           CRRYWTHGGTLRDIPVGGGSRKNAKRSRTCFP ATAVVSSSSGSLGYSASQLDHHSLP T
Sbjct: 61  CRRYWTHGGTLRDIPVGGGSRKNAKRSRTCFPTATAVVSSSSGSLGYSASQLDHHSLPTT 120

Query: 121 SMLLPLVSGHGXXXXXXXXXXGNMCGSFTSLLNTHAPGFWSLGGFGLGLGSGFEDLGYGA 180
           SM+LPLVSGHG          GNMCGSFTSLLNTHAPGFWSLGGFGLG+GSGFEDLGYGA
Sbjct: 121 SMVLPLVSGHGSGGGDLKAAGGNMCGSFTSLLNTHAPGFWSLGGFGLGIGSGFEDLGYGA 180

Query: 181 ASSRVSWPFLGLGESGHGGAPNAWQFENGDAAGFVGAADCLSWPELAISTPGNGLK 237
           ASSRV+WPFLGLGE GHGGAPNAWQFENGDAAGFVGAADCLSWPELAISTPGNGLK
Sbjct: 181 ASSRVAWPFLGLGEGGHGGAPNAWQFENGDAAGFVGAADCLSWPELAISTPGNGLK 236

BLAST of Carg00865 vs. NCBI nr
Match: XP_008440229.1 (PREDICTED: dof zinc finger protein DOF3.4 [Cucumis melo])

HSP 1 Score: 402.9 bits (1034), Expect = 7.5e-109
Identity = 194/242 (80.17%), Postives = 205/242 (84.71%), Query Frame = 0

Query: 1   MPSDVGDHRKTASKLLGSGGGVCPPSEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKS 60
           MPSD GDHRK  +K L SG GVCPP EQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKS
Sbjct: 1   MPSDAGDHRKAPTKPLASGSGVCPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKS 60

Query: 61  CRRYWTHGGTLRDIPVGGGSRKNAKRSRTCFPAATAVV-SSSSGSLGYSASQLDHHSLPA 120
           CRRYWTHGGTLRDIPVGGGSRKNAKRSRTC PA+ A+V SSSSGS   SAS++DHH LPA
Sbjct: 61  CRRYWTHGGTLRDIPVGGGSRKNAKRSRTCIPASAAIVSSSSSGSFSNSASRMDHHPLPA 120

Query: 121 TSMLLPLVSGHGXXXXXXXXXXGNMCGSFTSLLNTHAPGFWSLGGFGLGLGSGFEDLGYG 180
           T +L+PL  G G          GNMCGS TSLLNTHAPGFWSLGGFGLGLGSGFED+GYG
Sbjct: 121 TPVLVPLGGGVG---GDLKVGGGNMCGSITSLLNTHAPGFWSLGGFGLGLGSGFEDVGYG 180

Query: 181 AASSRVSWPFLGLGE-----SGHGGAPNAWQFENGDAAGFVGAADCLSWPELAISTPGNG 237
           AASSRV+WPFLGLG+      GHGG PN WQFENGDAAGFVG+ADCLSWPELAISTPGNG
Sbjct: 181 AASSRVAWPFLGLGDGGAGVGGHGGTPNTWQFENGDAAGFVGSADCLSWPELAISTPGNG 239

BLAST of Carg00865 vs. NCBI nr
Match: XP_004141936.1 (PREDICTED: dof zinc finger protein DOF3.4 [Cucumis sativus] >KGN48488.1 hypothetical protein Csa_6G490030 [Cucumis sativus])

HSP 1 Score: 401.4 bits (1030), Expect = 2.2e-108
Identity = 193/242 (79.75%), Postives = 203/242 (83.88%), Query Frame = 0

Query: 1   MPSDVGDHRKTASKLLGSGGGVCPPSEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKS 60
           MPSD GDHRK  +K L SG GVCPP EQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKS
Sbjct: 1   MPSDAGDHRKAPTKPLASGSGVCPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKS 60

Query: 61  CRRYWTHGGTLRDIPVGGGSRKNAKRSRTCFPAATAVV-SSSSGSLGYSASQLDHHSLPA 120
           CRRYWTHGGTLRDIPVGGGSRKNAKRSRTC P + A+V SSSSGS   S S+LDHH LPA
Sbjct: 61  CRRYWTHGGTLRDIPVGGGSRKNAKRSRTCIPTSAAIVSSSSSGSFSNSVSRLDHHPLPA 120

Query: 121 TSMLLPLVSGHGXXXXXXXXXXGNMCGSFTSLLNTHAPGFWSLGGFGLGLGSGFEDLGYG 180
           T +L+PL  G G          GNMCGSFTSLLNTHAPGFWSLGGFGLGLGSGFED+GYG
Sbjct: 121 TPVLVPLGGGVG---GDLKVGGGNMCGSFTSLLNTHAPGFWSLGGFGLGLGSGFEDVGYG 180

Query: 181 AASSRVSWPFLGLGE-----SGHGGAPNAWQFENGDAAGFVGAADCLSWPELAISTPGNG 237
            ASSRV+WPFLGLG+      GHGG PN WQFENGDAAGFVG+ADCLSWPELAISTPGNG
Sbjct: 181 TASSRVAWPFLGLGDGGAGVGGHGGTPNTWQFENGDAAGFVGSADCLSWPELAISTPGNG 239

BLAST of Carg00865 vs. TAIR10
Match: AT3G50410.1 (OBF binding protein 1)

HSP 1 Score: 176.0 bits (445), Expect = 2.7e-44
Identity = 111/261 (42.53%), Postives = 139/261 (53.26%), Query Frame = 0

Query: 3   SDVGDHRKTASKLLGSGGGVCPPSEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCR 62
           SD G+ R+ A K   +G  V    +QE LPCPRCDS+NTKFCYYNNYNFSQPRHFCK+CR
Sbjct: 4   SDSGEPRRIAMK--PNGVTVPISDQQEQLPCPRCDSSNTKFCYYNNYNFSQPRHFCKACR 63

Query: 63  RYWTHGGTLRDIPVGGGSRKNAKRSRTCFPAATAVVSSSSGSLGYSASQLDHHSLPATSM 122
           RYWTHGGTLRD+PVGGG+RK+AKRSRTC        +SSS S+    S  +   L  T +
Sbjct: 64  RYWTHGGTLRDVPVGGGTRKSAKRSRTC-------SNSSSSSVSGVVSNSNGVPLQTTPV 123

Query: 123 LLPLVSGHGXXXXXXXXXXG-----NMCGSFTSLLNTH---------APGFWSLGGFGLG 182
           L P  S             G     ++CGSFTS L  H                      
Sbjct: 124 LFPQSSISNGVTHTVTESDGKGSALSLCGSFTSTLLNHXXXXXXXXXXXXXXXXXXXXXX 183

Query: 183 LGSGFEDLGYGAASSRVSWPFLGLGES------GHGG-----APNAWQFE--NGDAAGFV 237
               F+D+ +G    R  WPF  +G +       +GG      P  WQFE    +A G  
Sbjct: 184 XXXXFDDVSFGL--GRAMWPFSTVGTATTTNVGSNGGHHAVPMPATWQFEGLESNAGGGF 243

BLAST of Carg00865 vs. TAIR10
Match: AT5G66940.1 (Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 167.2 bits (422), Expect = 1.3e-41
Identity = 108/233 (46.35%), Postives = 127/233 (54.51%), Query Frame = 0

Query: 1   MPSDVGDHRKTASKLLGSGGGVC-PPSEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCK 60
           MPS+  + R+      G GG V  P  +QE L CPRC+STNTKFCYYNNYNFSQPRHFCK
Sbjct: 1   MPSEFSESRRVPKIPHGQGGSVAIPTDQQEQLSCPRCESTNTKFCYYNNYNFSQPRHFCK 60

Query: 61  SCRRYWTHGGTLRDIPVGGGSRKNAKRSRTCFPAATAVVSSSSGSLGYSASQLDHHSLPA 120
           SCRRYWTHGGTLRDIPVGG SRK++KRSRT   AAT  V  S            +  L A
Sbjct: 61  SCRRYWTHGGTLRDIPVGGVSRKSSKRSRTYSSAATTSVVGSR-----------NFPLQA 120

Query: 121 TSMLLPLVSGHGXXXXXXXXXXGNMCGSFTSLLNTHAP--------GFWSLGGFGLGLGS 180
           T +L P  S +G           +  G F+SL+N +A         GF     FGLGLG 
Sbjct: 121 TPVLFPQSSSNG-GITTAKGSASSFYGGFSSLINYNAAVSRNGPGGGFNGPDAFGLGLGH 180

Query: 181 G--FEDLGYGAASSRVSWPF------LGLGESGHGGAPNAWQFENGDA-AGFV 216
           G  +ED+ YG   +   WPF           S     P  WQFE  ++  GFV
Sbjct: 181 GSYYEDVRYGQGIT--VWPFSSGATDAATTTSHIAQIPATWQFEGQESKVGFV 219

BLAST of Carg00865 vs. TAIR10
Match: AT3G21270.1 (DOF zinc finger protein 2)

HSP 1 Score: 119.8 bits (299), Expect = 2.3e-27
Identity = 50/61 (81.97%), Postives = 54/61 (88.52%), Query Frame = 0

Query: 26 SEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGGSRKNAK 85
          +EQE L CPRCDS NTKFCYYNNYN SQPRHFCKSCRRYWT GG LR++PVGGGSRKNA 
Sbjct: 24 AEQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGALRNVPVGGGSRKNAT 83

Query: 86 R 87
          +
Sbjct: 84 K 84

BLAST of Carg00865 vs. TAIR10
Match: AT1G51700.1 (DOF zinc finger protein 1)

HSP 1 Score: 118.2 bits (295), Expect = 6.7e-27
Identity = 50/61 (81.97%), Postives = 54/61 (88.52%), Query Frame = 0

Query: 27 EQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGGSRKNAKR 86
          EQE L CPRCDS NTKFCYYNNYN SQPRHFCK+CRRYWT GG LR+IPVGGG+RK+ KR
Sbjct: 29 EQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRKSNKR 88

Query: 87 S 88
          S
Sbjct: 89 S 89

BLAST of Carg00865 vs. TAIR10
Match: AT5G65590.1 (Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 110.5 bits (275), Expect = 1.4e-24
Identity = 46/79 (58.23%), Postives = 56/79 (70.89%), Query Frame = 0

Query: 7  DHRKTASKLLGSGGGVCPPSEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRRYWT 66
          DHR + +             +Q++L CPRC+S NTKFCYYNNY+ SQPRHFCKSCRRYWT
Sbjct: 17 DHRISGTSQTKKPPSSSVAQDQQNLKCPRCNSPNTKFCYYNNYSLSQPRHFCKSCRRYWT 76

Query: 67 HGGTLRDIPVGGGSRKNAK 86
           GG LR++P+GGG RK  K
Sbjct: 77 RGGALRNVPIGGGCRKTKK 95

BLAST of Carg00865 vs. Swiss-Prot
Match: sp|Q39088|DOF34_ARATH (Dof zinc finger protein DOF3.4 OS=Arabidopsis thaliana OX=3702 GN=DOF3.4 PE=1 SV=2)

HSP 1 Score: 176.0 bits (445), Expect = 4.9e-43
Identity = 111/261 (42.53%), Postives = 139/261 (53.26%), Query Frame = 0

Query: 3   SDVGDHRKTASKLLGSGGGVCPPSEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCR 62
           SD G+ R+ A K   +G  V    +QE LPCPRCDS+NTKFCYYNNYNFSQPRHFCK+CR
Sbjct: 4   SDSGEPRRIAMK--PNGVTVPISDQQEQLPCPRCDSSNTKFCYYNNYNFSQPRHFCKACR 63

Query: 63  RYWTHGGTLRDIPVGGGSRKNAKRSRTCFPAATAVVSSSSGSLGYSASQLDHHSLPATSM 122
           RYWTHGGTLRD+PVGGG+RK+AKRSRTC        +SSS S+    S  +   L  T +
Sbjct: 64  RYWTHGGTLRDVPVGGGTRKSAKRSRTC-------SNSSSSSVSGVVSNSNGVPLQTTPV 123

Query: 123 LLPLVSGHGXXXXXXXXXXG-----NMCGSFTSLLNTH---------APGFWSLGGFGLG 182
           L P  S             G     ++CGSFTS L  H                      
Sbjct: 124 LFPQSSISNGVTHTVTESDGKGSALSLCGSFTSTLLNHXXXXXXXXXXXXXXXXXXXXXX 183

Query: 183 LGSGFEDLGYGAASSRVSWPFLGLGES------GHGG-----APNAWQFE--NGDAAGFV 237
               F+D+ +G    R  WPF  +G +       +GG      P  WQFE    +A G  
Sbjct: 184 XXXXFDDVSFGL--GRAMWPFSTVGTATTTNVGSNGGHHAVPMPATWQFEGLESNAGGGF 243

BLAST of Carg00865 vs. Swiss-Prot
Match: sp|Q9FGD6|DOF58_ARATH (Dof zinc finger protein DOF5.8 OS=Arabidopsis thaliana OX=3702 GN=DOF5.8 PE=2 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 2.3e-40
Identity = 108/233 (46.35%), Postives = 127/233 (54.51%), Query Frame = 0

Query: 1   MPSDVGDHRKTASKLLGSGGGVC-PPSEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCK 60
           MPS+  + R+      G GG V  P  +QE L CPRC+STNTKFCYYNNYNFSQPRHFCK
Sbjct: 1   MPSEFSESRRVPKIPHGQGGSVAIPTDQQEQLSCPRCESTNTKFCYYNNYNFSQPRHFCK 60

Query: 61  SCRRYWTHGGTLRDIPVGGGSRKNAKRSRTCFPAATAVVSSSSGSLGYSASQLDHHSLPA 120
           SCRRYWTHGGTLRDIPVGG SRK++KRSRT   AAT  V  S            +  L A
Sbjct: 61  SCRRYWTHGGTLRDIPVGGVSRKSSKRSRTYSSAATTSVVGSR-----------NFPLQA 120

Query: 121 TSMLLPLVSGHGXXXXXXXXXXGNMCGSFTSLLNTHAP--------GFWSLGGFGLGLGS 180
           T +L P  S +G           +  G F+SL+N +A         GF     FGLGLG 
Sbjct: 121 TPVLFPQSSSNG-GITTAKGSASSFYGGFSSLINYNAAVSRNGPGGGFNGPDAFGLGLGH 180

Query: 181 G--FEDLGYGAASSRVSWPF------LGLGESGHGGAPNAWQFENGDA-AGFV 216
           G  +ED+ YG   +   WPF           S     P  WQFE  ++  GFV
Sbjct: 181 GSYYEDVRYGQGIT--VWPFSSGATDAATTTSHIAQIPATWQFEGQESKVGFV 219

BLAST of Carg00865 vs. Swiss-Prot
Match: sp|Q94AR6|DOF31_ARATH (Dof zinc finger protein DOF3.1 OS=Arabidopsis thaliana OX=3702 GN=DOF3.1 PE=2 SV=2)

HSP 1 Score: 119.8 bits (299), Expect = 4.1e-26
Identity = 50/61 (81.97%), Postives = 54/61 (88.52%), Query Frame = 0

Query: 26 SEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGGSRKNAK 85
          +EQE L CPRCDS NTKFCYYNNYN SQPRHFCKSCRRYWT GG LR++PVGGGSRKNA 
Sbjct: 24 AEQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGALRNVPVGGGSRKNAT 83

Query: 86 R 87
          +
Sbjct: 84 K 84

BLAST of Carg00865 vs. Swiss-Prot
Match: sp|O82155|DOF17_ARATH (Dof zinc finger protein DOF1.7 OS=Arabidopsis thaliana OX=3702 GN=DOF1.7 PE=2 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.2e-25
Identity = 50/61 (81.97%), Postives = 54/61 (88.52%), Query Frame = 0

Query: 27 EQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGGSRKNAKR 86
          EQE L CPRCDS NTKFCYYNNYN SQPRHFCK+CRRYWT GG LR+IPVGGG+RK+ KR
Sbjct: 29 EQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRKSNKR 88

Query: 87 S 88
          S
Sbjct: 89 S 89

BLAST of Carg00865 vs. Swiss-Prot
Match: sp|O24463|PBF_MAIZE (Dof zinc finger protein PBF OS=Zea mays OX=4577 GN=PBF PE=1 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.7e-25
Identity = 58/116 (50.00%), Postives = 73/116 (62.93%), Query Frame = 0

Query: 17  GSGGGVCPPSEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPV 76
           GSG     P   E L CPRCDS NTKFCYYNNY+ SQPR+FCK+CRRYWTHGGTLR++P+
Sbjct: 46  GSGERKPRPQLPEALKCPRCDSNNTKFCYYNNYSMSQPRYFCKACRRYWTHGGTLRNVPI 105

Query: 77  GGGSRKNAKRSRTCFPAATAVVSSS-------SGSLGYSASQLDHHSLPATSMLLP 126
           GGG RKN   SR    + T+  SS+       S +   S   ++ H +   +M +P
Sbjct: 106 GGGCRKNKHASRFVLGSHTSSSSSATYAPLSPSTNASSSNMSINKHMMMVPNMTMP 161

BLAST of Carg00865 vs. TrEMBL
Match: tr|A0A1S3B0L0|A0A1S3B0L0_CUCME (dof zinc finger protein DOF3.4 OS=Cucumis melo OX=3656 GN=LOC103484745 PE=4 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 4.9e-109
Identity = 194/242 (80.17%), Postives = 205/242 (84.71%), Query Frame = 0

Query: 1   MPSDVGDHRKTASKLLGSGGGVCPPSEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKS 60
           MPSD GDHRK  +K L SG GVCPP EQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKS
Sbjct: 1   MPSDAGDHRKAPTKPLASGSGVCPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKS 60

Query: 61  CRRYWTHGGTLRDIPVGGGSRKNAKRSRTCFPAATAVV-SSSSGSLGYSASQLDHHSLPA 120
           CRRYWTHGGTLRDIPVGGGSRKNAKRSRTC PA+ A+V SSSSGS   SAS++DHH LPA
Sbjct: 61  CRRYWTHGGTLRDIPVGGGSRKNAKRSRTCIPASAAIVSSSSSGSFSNSASRMDHHPLPA 120

Query: 121 TSMLLPLVSGHGXXXXXXXXXXGNMCGSFTSLLNTHAPGFWSLGGFGLGLGSGFEDLGYG 180
           T +L+PL  G G          GNMCGS TSLLNTHAPGFWSLGGFGLGLGSGFED+GYG
Sbjct: 121 TPVLVPLGGGVG---GDLKVGGGNMCGSITSLLNTHAPGFWSLGGFGLGLGSGFEDVGYG 180

Query: 181 AASSRVSWPFLGLGE-----SGHGGAPNAWQFENGDAAGFVGAADCLSWPELAISTPGNG 237
           AASSRV+WPFLGLG+      GHGG PN WQFENGDAAGFVG+ADCLSWPELAISTPGNG
Sbjct: 181 AASSRVAWPFLGLGDGGAGVGGHGGTPNTWQFENGDAAGFVGSADCLSWPELAISTPGNG 239

BLAST of Carg00865 vs. TrEMBL
Match: tr|A0A0A0KG50|A0A0A0KG50_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G490030 PE=4 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 1.4e-108
Identity = 193/242 (79.75%), Postives = 203/242 (83.88%), Query Frame = 0

Query: 1   MPSDVGDHRKTASKLLGSGGGVCPPSEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKS 60
           MPSD GDHRK  +K L SG GVCPP EQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKS
Sbjct: 1   MPSDAGDHRKAPTKPLASGSGVCPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKS 60

Query: 61  CRRYWTHGGTLRDIPVGGGSRKNAKRSRTCFPAATAVV-SSSSGSLGYSASQLDHHSLPA 120
           CRRYWTHGGTLRDIPVGGGSRKNAKRSRTC P + A+V SSSSGS   S S+LDHH LPA
Sbjct: 61  CRRYWTHGGTLRDIPVGGGSRKNAKRSRTCIPTSAAIVSSSSSGSFSNSVSRLDHHPLPA 120

Query: 121 TSMLLPLVSGHGXXXXXXXXXXGNMCGSFTSLLNTHAPGFWSLGGFGLGLGSGFEDLGYG 180
           T +L+PL  G G          GNMCGSFTSLLNTHAPGFWSLGGFGLGLGSGFED+GYG
Sbjct: 121 TPVLVPLGGGVG---GDLKVGGGNMCGSFTSLLNTHAPGFWSLGGFGLGLGSGFEDVGYG 180

Query: 181 AASSRVSWPFLGLGE-----SGHGGAPNAWQFENGDAAGFVGAADCLSWPELAISTPGNG 237
            ASSRV+WPFLGLG+      GHGG PN WQFENGDAAGFVG+ADCLSWPELAISTPGNG
Sbjct: 181 TASSRVAWPFLGLGDGGAGVGGHGGTPNTWQFENGDAAGFVGSADCLSWPELAISTPGNG 239

BLAST of Carg00865 vs. TrEMBL
Match: tr|A0A061DG25|A0A061DG25_THECC (Dof-type zinc finger DNA-binding family protein, putative OS=Theobroma cacao OX=3641 GN=TCM_000526 PE=4 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 9.1e-71
Identity = 147/248 (59.27%), Postives = 172/248 (69.35%), Query Frame = 0

Query: 1   MPSDVGDHRKTASKLLGSGGGVCPPSEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKS 60
           MPSD GD  +  +K L SG    PP EQE LPCPRCDSTNTKFCYYNNYNFSQPRHFCKS
Sbjct: 1   MPSDSGDQNRRLTKALNSG---APPPEQEQLPCPRCDSTNTKFCYYNNYNFSQPRHFCKS 60

Query: 61  CRRYWTHGGTLRDIPVGGGSRKNAKRSRTCFPAATAVVSSSSGSLGYSASQLDHHSLPAT 120
           CRRYWTHGGTLRDIPVGGG+RKNAKRSRT    ATA+ ++++ +   + +  ++  LPAT
Sbjct: 61  CRRYWTHGGTLRDIPVGGGTRKNAKRSRT-NTHATAISATNAAT---TTTSHNNFPLPAT 120

Query: 121 SMLLPLVSGH---GXXXXXXXXXXGNMCGSFTSLLNTHAPGFWSLGGFGLGLGSGFEDLG 180
            +LLPL +     G          GN+CGSFTSLLNT  PGF +LGGFGLG+G G ED+G
Sbjct: 121 PVLLPLSANQGTFGIGGESKGNGGGNICGSFTSLLNTQGPGFLALGGFGLGIGPGLEDVG 180

Query: 181 YGAASSRVSWPFLGLGE---------SGHGGAPNAWQFENGDAAGFVGAADCLSWPELAI 237
           +G    R  WPF G+G+         S   G  N WQFE+G+  GFVG  DC SWP+LAI
Sbjct: 181 FGL--GRGMWPFSGMGDGAAAVGGNVSAANGMGNTWQFESGE-TGFVG-GDCFSWPDLAI 237

BLAST of Carg00865 vs. TrEMBL
Match: tr|A0A1R3GFB5|A0A1R3GFB5_COCAP (Zinc finger, Dof-type OS=Corchorus capsularis OX=210143 GN=CCACVL1_26287 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 1.9e-68
Identity = 145/254 (57.09%), Postives = 163/254 (64.17%), Query Frame = 0

Query: 1   MPSDVGDHRKTASKLLGSGGGVCPPSEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKS 60
           MPSD GD  +  +K L SG    PP EQE LPCPRCDSTNTKFCYYNNYNFSQPRHFCKS
Sbjct: 1   MPSDSGDSNRRLTKALNSG---APPPEQEQLPCPRCDSTNTKFCYYNNYNFSQPRHFCKS 60

Query: 61  CRRYWTHGGTLRDIPVGGGSRKNAKRSRTCFPAATA---VVSSSSGSLGYSASQLDHHSL 120
           CRRYWTHGGTLRDIPVGGG+RKNAKRSRT    AT+   ++S               + L
Sbjct: 61  CRRYWTHGGTLRDIPVGGGTRKNAKRSRTATSIATSHATIMSXXXXXXXXXXXXXXXYPL 120

Query: 121 PATSMLLPLVSGH---GXXXXXXXXXXGNMCGSFTSLLNTHAP-GFWSLGGFGLGLGSGF 180
           PAT +LLPL +     G          GN+CGSFTSLLNT  P GF +LGGFGLG+G G 
Sbjct: 121 PATPVLLPLSANQGSFGIGGESKGNGGGNLCGSFTSLLNTQGPAGFLALGGFGLGIGPGL 180

Query: 181 EDLGYGAASSRVSWPFLG-----------LGESGHGGAPNAWQFENGDAAGFVGAADCLS 237
           ED+G+G    R  WPF G                  G  N+WQFE+G+  GFVG  DC S
Sbjct: 181 EDVGFGL--GRGMWPFSGXXXXXXXXXXXXXXXXXXGMGNSWQFESGE-TGFVGGGDCFS 240

BLAST of Carg00865 vs. TrEMBL
Match: tr|A0A2I4F3X6|A0A2I4F3X6_9ROSI (dof zinc finger protein DOF3.4-like OS=Juglans regia OX=51240 GN=LOC108995274 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 2.5e-68
Identity = 145/257 (56.42%), Postives = 170/257 (66.15%), Query Frame = 0

Query: 1   MPSDVGDHRKTASKLLGSGGGVCPPSEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKS 60
           MPSD  +HR+       +G    PP EQE LPCPRCDSTNTKFCYYNNYNFSQPRHFCKS
Sbjct: 1   MPSDSSEHRRPTKPTHNTG---APPPEQEQLPCPRCDSTNTKFCYYNNYNFSQPRHFCKS 60

Query: 61  CRRYWTHGGTLRDIPVGGGSRKNAKRSRTCFPAATAVVSSSSGSLGYSASQLDHHSLPAT 120
           CRRYWTHGGTLRDIPVGGGSRKNAKRSRT    + AV S+++       S +D   LP T
Sbjct: 61  CRRYWTHGGTLRDIPVGGGSRKNAKRSRTAIATSGAVSSTAT-------SHVD--PLPVT 120

Query: 121 SMLLPLVSGHGXXXXXXXXXXG---------NMCGSFTSLLNTHAPGFWSLGGFGLGLGS 180
            +L+P    HG          G         ++CGSFTSLLNT  PGF +LGGFGLG+G 
Sbjct: 121 PVLVPFTHNHGSSVHFGAGINGGGAEGKGNVSVCGSFTSLLNTQGPGFLALGGFGLGVGP 180

Query: 181 GFEDLGYGAASSRVSWPFLGLGE--------SGHGGAP---NAWQFENGDAAGFVGA-AD 237
           GFE++G+G   +R  WPF G+G+         G+GGA    N WQFE+G+ +GFVG    
Sbjct: 181 GFEEMGFGL--NRGMWPFPGVGDGGSSGCVVGGNGGATGMGNTWQFESGE-SGFVGGDHH 240

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_023544852.17.7e-13094.92dof zinc finger protein DOF3.4-like [Cucurbita pepo subsp. pepo][more]
XP_022950525.13.2e-12898.31dof zinc finger protein DOF3.4-like [Cucurbita moschata][more]
XP_022979126.15.5e-12892.80dof zinc finger protein DOF3.4-like [Cucurbita maxima][more]
XP_008440229.17.5e-10980.17PREDICTED: dof zinc finger protein DOF3.4 [Cucumis melo][more]
XP_004141936.12.2e-10879.75PREDICTED: dof zinc finger protein DOF3.4 [Cucumis sativus] >KGN48488.1 hypothet... [more]
Match NameE-valueIdentityDescription
AT3G50410.12.7e-4442.53OBF binding protein 1[more]
AT5G66940.11.3e-4146.35Dof-type zinc finger DNA-binding family protein[more]
AT3G21270.12.3e-2781.97DOF zinc finger protein 2[more]
AT1G51700.16.7e-2781.97DOF zinc finger protein 1[more]
AT5G65590.11.4e-2458.23Dof-type zinc finger DNA-binding family protein[more]
Match NameE-valueIdentityDescription
sp|Q39088|DOF34_ARATH4.9e-4342.53Dof zinc finger protein DOF3.4 OS=Arabidopsis thaliana OX=3702 GN=DOF3.4 PE=1 SV... [more]
sp|Q9FGD6|DOF58_ARATH2.3e-4046.35Dof zinc finger protein DOF5.8 OS=Arabidopsis thaliana OX=3702 GN=DOF5.8 PE=2 SV... [more]
sp|Q94AR6|DOF31_ARATH4.1e-2681.97Dof zinc finger protein DOF3.1 OS=Arabidopsis thaliana OX=3702 GN=DOF3.1 PE=2 SV... [more]
sp|O82155|DOF17_ARATH1.2e-2581.97Dof zinc finger protein DOF1.7 OS=Arabidopsis thaliana OX=3702 GN=DOF1.7 PE=2 SV... [more]
sp|O24463|PBF_MAIZE2.7e-2550.00Dof zinc finger protein PBF OS=Zea mays OX=4577 GN=PBF PE=1 SV=1[more]
Match NameE-valueIdentityDescription
tr|A0A1S3B0L0|A0A1S3B0L0_CUCME4.9e-10980.17dof zinc finger protein DOF3.4 OS=Cucumis melo OX=3656 GN=LOC103484745 PE=4 SV=1[more]
tr|A0A0A0KG50|A0A0A0KG50_CUCSA1.4e-10879.75Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G490030 PE=4 SV=1[more]
tr|A0A061DG25|A0A061DG25_THECC9.1e-7159.27Dof-type zinc finger DNA-binding family protein, putative OS=Theobroma cacao OX=... [more]
tr|A0A1R3GFB5|A0A1R3GFB5_COCAP1.9e-6857.09Zinc finger, Dof-type OS=Corchorus capsularis OX=210143 GN=CCACVL1_26287 PE=4 SV... [more]
tr|A0A2I4F3X6|A0A2I4F3X6_9ROSI2.5e-6856.42dof zinc finger protein DOF3.4-like OS=Juglans regia OX=51240 GN=LOC108995274 PE... [more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR003851Znf_Dof
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg00865-RACarg00865-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003851Zinc finger, Dof-typePFAMPF02701zf-Dofcoord: 29..85
e-value: 2.1E-33
score: 114.1
IPR003851Zinc finger, Dof-typePROSITEPS01361ZF_DOF_1coord: 33..69
IPR003851Zinc finger, Dof-typePRODOMPD007478coord: 2..85
e-value: 3.0E-29
score: 320.0
IPR003851Zinc finger, Dof-typePROSITEPS50884ZF_DOF_2coord: 31..85
score: 29.264
NoneNo IPR availablePANTHERPTHR31992:SF12DOF ZINC FINGER PROTEIN DOF3.4-RELATEDcoord: 1..233
NoneNo IPR availablePANTHERPTHR31992FAMILY NOT NAMEDcoord: 1..233

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg00865Cla022532Watermelon (97103) v1carwmB0401
Carg00865Cla001812Watermelon (97103) v1carwmB0407
Carg00865Csa6G490030Cucumber (Chinese Long) v2carcuB0441
Carg00865Csa2G360720Cucumber (Chinese Long) v2carcuB0433
Carg00865MELO3C007527Melon (DHL92) v3.5.1carmeB0414
Carg00865MELO3C010904Melon (DHL92) v3.5.1carmeB0408
Carg00865ClCG08G015510Watermelon (Charleston Gray)carwcgB0404
Carg00865ClCG01G016570Watermelon (Charleston Gray)carwcgB0397
Carg00865CSPI06G27730Wild cucumber (PI 183967)carcpiB0446
Carg00865CSPI02G19570Wild cucumber (PI 183967)carcpiB0438
Carg00865Cucsa.102120Cucumber (Gy14) v1carcgyB0467
Carg00865Cucsa.232530Cucumber (Gy14) v1carcgyB0470
Carg00865CmaCh07G007280Cucurbita maxima (Rimu)carcmaB0571
Carg00865CmaCh05G002100Cucurbita maxima (Rimu)carcmaB0569
Carg00865CmaCh03G010020Cucurbita maxima (Rimu)carcmaB0567
Carg00865CmoCh07G007450Cucurbita moschata (Rifu)carcmoB0554
Carg00865Lsi01G010100Bottle gourd (USVL1VR-Ls)carlsiB364
Carg00865Cp4.1LG19g11560Cucurbita pepo (Zucchini)carcpeB0563
Carg00865Cp4.1LG11g01700Cucurbita pepo (Zucchini)carcpeB0556
Carg00865Cp4.1LG10g02710Cucurbita pepo (Zucchini)carcpeB0554
Carg00865CsGy2G019440Cucumber (Gy14) v2carcgybB0411
Carg00865CsGy6G027220Cucumber (Gy14) v2carcgybB0418
Carg00865MELO3C007527.2Melon (DHL92) v3.6.1carmedB0418
Carg00865MELO3C010904.2Melon (DHL92) v3.6.1carmedB0412
Carg00865CsaV3_6G042890Cucumber (Chinese Long) v3carcucB0442
Carg00865CsaV3_2G028270Cucumber (Chinese Long) v3carcucB0435
Carg00865Cla97C01G015580Watermelon (97103) v2carwmbB0426
Carg00865Cla97C08G159100Watermelon (97103) v2carwmbB0434
Carg00865Bhi03G001479Wax gourdcarwgoB0489
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg00865Carg11831Silver-seed gourdcarcarB218
Carg00865Carg05235Silver-seed gourdcarcarB428
The following block(s) are covering this gene:
GeneOrganismBlock
Carg00865Silver-seed gourdcarcarB427
Carg00865Cucurbita moschata (Rifu)carcmoB0551
Carg00865Cucurbita pepo (Zucchini)carcpeB0568
Carg00865Cucurbita pepo (Zucchini)carcpeB0570
Carg00865Melon (DHL92) v3.5.1carmeB0403