Carg00864 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg00864
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Nuclear pore complex protein nup58
Location	Cucurbita_argyrosperma_scaffold_014 : 1858466 .. 1863287 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTTTTCGCTGTTCTCAACTTCGCAACCGCAGCAGTCTCAGCAGTTATTTCAATCGCAGCCACAATCACAGCCGCAACTTTTTCAGCAGAGCAGCGCATTGTTCTCACAGCAGCCACAGCAATTTCAACTGCAACAGCAGCAGTTAATGCAGCAACAGCAGCAGTTAATGCAGCAACAGCAGCAGTTGTTCATTTTTACTAATGATAAGGCTCCTGCAAGTTATGGTACTAAGTGGGCGGACCTCCATCCAGATTCGCAGAAAATCCTCATTCAGATAGAGTATGTGCTTTTATACTCGCTTTGAAACTTGTTGCTCTGTCTTGTTTTTTATCTTAATTGTTTGGGTTGAAGTTTAAAAGATATTGGGCAAGAAGTAATATTTCGAGTCTTTGATGGGTTTCTGCGAAGAAATGCATTTTTGTATTCAAGCAAAATTTTTGGCCGTTTAGCTAAGGTTTGAACATTTTATGATTTTCCATATTATATGGCTATTTAGATAATGTGTCACTACAGGGAACGAATTTTGGAGTATCGGGATGAAAGTCAGAGGCTGGATCAGTGTAGTCGCCTCTACGATTCTTCAGTTTCTAATGATGGATTTGAGCTTGATGCCAGTCGAATTGTTCAGGTTGCTTTTGACGTTATCAGCTTCGTTTTCATTTCCTTTCGGACTTCACATCAAATAACTATTGGACAGTTGAGCATACTGACAATATATTTGTGTACCAAGATATGCATGTGAAAATGCATGCAGCTTCATTCTATTTTTCACATTTATGCCAACTACAAGGCCGTATGGAGGGAAGGATCCCTCTGTCCTTTCATTTTCTGTTGGAAGAGGCGATTGTTTCTTTTGTAGCTGACGGAAGAAAGGTCCACGTGAAACCTGTTTACTACATGCATCTTTCTTAGTGTTCAACTTTAAAGCATCTGAGAGAAATTATTTGTTTGAGTTTTATAGTATTGAACTGCACATCCATCAACTACATGAATTCTCTTTGCTTTCATGTTTGATACATGTTTATTGATTTTTTTGTATTGTAAAATTCTGGGATTATTTGAAATCATTACAAATTCCTTATCAGGAACTTGGGGGAATTAGTACGTCTACAGAACATCAAAAAGTACTGCTTCAAGAGCTGATGACTACTGCGAAAGGGATGCTTTGGAACACGGAAGTTGCTATTCGCTCTTTCATGAAGATACGCCCAAGGTTCCTTAATCAGAGTGAAGGAGGTGCTTCAAATTCCACTGCACCGCCACAGGTCTCTGGAGCAACATCACCAATAGGTTCTAGTGGTCAACCGACATCTACCTCAATTGCTCCAGTTTTTGATTTCTACAGTGGGCTCCCAAGTAAACCATCTCCATTTTTGCAACAAACTGTTTCAAGATTTGAGAAGTATCTTGGTGAATGTCGCCAGTGGATTGAAGAGTTAGAGCAATTCCTTGCCCTAGATTCTAATAGGAGTGCTTCCAATTCTAGCACTTCATTGTTTCATTCACTTCCTAAAATCATGTCAAATGTGCACGAATTCTTTGTTCATGTGGCTGCCAAGGTAGGAGTAATGTTGTCCTTAACGGGCAATAATTTGAAATAGTGGGCCTTTTTGAAATGGTTGTTCTCCTCTTAGGTTGTCCTGTACATGTCGATGGATATCAAAATACCTGGTTCTTATTAGTGAAGGGATCTTCATATCTGATAAGGATTGTAATAAGTTGCTCTTCAAAGTGTACATGTCACCGTTGTAAGTTGGTTAGGGGAGAGTGATTGTAAGTAATATAATGTAAATTTGAGTCCCTTCTTTGGCAATGAGTTTGACTTAAATTGTTATATCATGCATGAAAACAGAGTCTAATTTTTTTTTTCAAGTGATGGTTTTTAAGTTTGGAAAATCTCTCCCGCTTTTTCTTTCAGAGTGAGAAAATTCTTCAACTTATCTACATGCGCATGATCTCACAGGAGAGAGTAGTATGCTACACGTGCACATTCTTATAATAACATGTTCAACATTATCCCTCAGGTTGAGAGCATTCATCAGTACATTGACTCAATGAAGGCGGCTTATCTTGCGGACCAGCGTTGCAGAGGGGATGGAAACAATCCCTTTCTTGAGGCTGATCGGAGGGAAACTGCACGCCAAGAAGCGGCAGCTAAGAGGGTACATCCAACTTTACATTTGACTGCAAATACACAACCATCAACACAAGCTGCTGGATTACTTGCCAGCTCAGGTAGCCATGGTGCGTCAACAGTACAACAGTTGTCTACAGTTGCTACACCAGCTTCTTCCGGTGGTGGATTGTCACTATTTAGCACTCCCTCTGCTCCATCCACTACATCATCTTCTCTTTTCATGACACCAACAGCATCTGTTCAAACATCCTCTCTGTTTAGTTCTTCTGGTGCAACAGGTCCTACAACACTTTTTGGCTCGTCATCTGCACCATTGTTTAATTCTGCTATTACTCCCTTTGGCAGTACTGCTCAATCTTTTGGGCAATCTGCTTCTGCAGGAAGTTCACTATTTTCGACACCCTTTGCTTCAGGTAAATTCTTGACATATTTTTTTGTTTGGAGTAGTACTGAGCTTATTGTTTATTAATAATAGTCAATCACCTATTATCTATCTTTATCCCGAAATGTTAGAAAACGTCTATTCTCTGGAAAACTTGCTAAAATAGCAAAAAATAAATACCCCAAAATTCATATTCATATATTTTTAGACAGCGCCATGTGGTGTGGTAGGGTCTGAGCACAATGGGGCTCTCATCTCACCTTATCTGGCATCTCCTTCCAGAGAACTTGTGCCTGATCTGCCGCTGAGCCGCTGAGATGCAATTCACATTATAATACTGGAAAGGAAATGATGAACCATTTGATTGATAGGAATGCCTTCCGATGGTTAGAAATGTTAACCTAGGGTCAAGGGTATATTAGTAATCAGGTCGAGGAGTTTATTGTTAGGAGTTAATCGTCAATGGGCAACTGGGTGGATAGGAAGGTAGTCTGCATAATATGATTGCATTTTGTCAGATGATTTTTTAATAGAAATTTCAATCCCAGCAGCCTTTTTGTTTTTTTACTTTTAACTTTCAATTTTATCATTATTATTTAAGCAGTGCTTGATTTCAATCTGTGGGGGTTGTATTTATCCTGAGAGATCTTTGGATCAATGGTTGTTGCCTTGCATTTGAACAAGCTTTTTCCTGTACAAATTGTTAAATGAGTTATAATTCTTGCTATTACCATGTGTTGGCCCCAGTCAATGATATAAGTTTCAATAAGAGAAATTGTATGGGGTTAGCAGTTGCTAGTTTGGATCTGTTTGTAACGATGACTTGTACTGTTTTCATAGGTGCTGCAATAGGATCTGGGGCTAGCTTTGGAGCAACTTCGGTGAGTTACATATTTCTCATATCAGGTTTTGGTTCTTCGGTTTATTCCCTTTTATGAACGTTTTTAGCGCTACTAGTCTATGACTCTGAAGTCCTTAACTTAAGGTGTAACATTCGTAGTATCAATTCGGCACTTCTGCTTATGAATGGAAGATCTGTTGGGGATTTATGGGGTCGTGTGTATTTGTAGAAAACATAAAATCTCATGCTTATGCTTGGTATATTTGCTTGGTACATGCAAACTATATGACCAATCTTATTCTATTGCAGAAATCATCGAAGCCAAAGTCCCGAACGGCACGACGCTACTAGTCATAAATGACCATGTAAGATTATTACCAGCTACAAGTAACAACTGATGAAAAAAAATAGCCAAGGTTCACAAGAAACAACGGTGTCATATTTTGGGGGAAAGGCCAATTCCTTAGTTACCCGAACCTTTCTTGCAAAGTAGAAGGAAATTGGAATGTTTTCTCAAGACATCCGCTTCGGCTCATTGCCTTCTGAAGGAGAGTGGCGAGGTGACGCGAGAATTCTGTAACTCTGTAGAATACGCATAGGTGCGATCGATTCTTCTCGTGAAAACTCAAAGAACAGGACTTGTTTTTCTTTTGTCACACACCATTTTCTTGTCATTCTTAGTGGCCTGCAGTACAGAAAATTTGACATTGCGGTTTCAGGAAACAAGAATATGCTCAAGTGGGAGACTATATTCAAAAGCTCGAGTGTTTACCGGATATTCTTCTTGGACATGTCGATGCCTCCGACTCAGCCGCCGTCAGGGTTGGCAAGTTCACTTTTTAAGAGGTTCATACATCTTCTCTACAGTATCTTTAAAGAATTTTGTTCGCATCTGCATTACTCGTGTAATTTGTGTACTGAATTTTTGGTGAGTTTTCATCCCTTTTTACCTTTTATATACACATATATATTGATTATCATATCTCCCCAGAATTGACCTTTTGTAATTTAGTTGTGCATAGTATTTTTGGTGATTTTTCATCCCTTTGTTTTGAGTCTTAGCCCCATATCCATTCACCGAAATTTCTGGTCCATCCAAAATTCAGCCCACTGTTTAACCAAACAGCTCTGATAACATTGGGCATCTGTTCGGATATGCATGTCTTGTGTGGGTGTGGCTCCACTGATTGACGACCATTTAAAAGCTCCAATATGACGACATGTCTTCCATTCACCATCTCCACCCACTAAGTTCTGTCTTTTATCTCAATTGAGGTTGTCTTTTATCTCAATTCAAACTGATAAGCAGTTTGTACTGAGAAATTGAAAAAATATATCAATTTTGTATCCAAATAATGTCTCAAACTTAATTTAAAATTTGTTTTTTCTAACAAAAACTTCTCAACAGTAATTTGAAATTTTGTTTCTCCTTTTTTTTTCTTTGGAATCAGGGGTAG

mRNA sequence

ATGGCGTTTTCGCTGTTCTCAACTTCGCAACCGCAGCAGTCTCAGCAGTTATTTCAATCGCAGCCACAATCACAGCCGCAACTTTTTCAGCAGAGCAGCGCATTGTTCTCACAGCAGCCACAGCAATTTCAACTGCAACAGCAGCAGTTAATGCAGCAACAGCAGCAGTTAATGCAGCAACAGCAGCAGTTGTTCATTTTTACTAATGATAAGGCTCCTGCAAGTTATGGTACTAAGTGGGCGGACCTCCATCCAGATTCGCAGAAAATCCTCATTCAGATAGAGGAACGAATTTTGGAGTATCGGGATGAAAGTCAGAGGCTGGATCAGTGTAGTCGCCTCTACGATTCTTCAGTTTCTAATGATGGATTTGAGCTTGATGCCAGTCGAATTGTTCAGGAACTTGGGGGAATTAGTACGTCTACAGAACATCAAAAAGTACTGCTTCAAGAGCTGATGACTACTGCGAAAGGGATGCTTTGGAACACGGAAGTTGCTATTCGCTCTTTCATGAAGATACGCCCAAGGTTCCTTAATCAGAGTGAAGGAGGTGCTTCAAATTCCACTGCACCGCCACAGGTCTCTGGAGCAACATCACCAATAGGTTCTAGTGGTCAACCGACATCTACCTCAATTGCTCCAGTTTTTGATTTCTACAGTGGGCTCCCAAGTAAACCATCTCCATTTTTGCAACAAACTGTTTCAAGATTTGAGAAGTATCTTGGTGAATGTCGCCAGTGGATTGAAGAGTTAGAGCAATTCCTTGCCCTAGATTCTAATAGGAGTGCTTCCAATTCTAGCACTTCATTGTTTCATTCACTTCCTAAAATCATGTCAAATGTGCACGAATTCTTTGTTCATGTGGCTGCCAAGGTTGAGAGCATTCATCAGTACATTGACTCAATGAAGGCGGCTTATCTTGCGGACCAGCGTTGCAGAGGGGATGGAAACAATCCCTTTCTTGAGGCTGATCGGAGGGAAACTGCACGCCAAGAAGCGGCAGCTAAGAGGGTACATCCAACTTTACATTTGACTGCAAATACACAACCATCAACACAAGCTGCTGGATTACTTGCCAGCTCAGGTAGCCATGGTGCGTCAACAGTACAACAGTTGTCTACAGTTGCTACACCAGCTTCTTCCGGTGGTGGATTGTCACTATTTAGCACTCCCTCTGCTCCATCCACTACATCATCTTCTCTTTTCATGACACCAACAGCATCTGTTCAAACATCCTCTCTGTTTAGTTCTTCTGGTGCAACAGGTCCTACAACACTTTTTGGCTCGTCATCTGCACCATTGTTTAATTCTGCTATTACTCCCTTTGGCAGTACTGCTCAATCTTTTGGGCAATCTGCTTCTGCAGGAAGTTCACTATTTTCGACACCCTTTGCTTCAGAAATCATCGAAGCCAAAGTCCCGAACGGCACGACGCTACTAGTCATAAATGACCATGGGTAG

Coding sequence (CDS)

ATGGCGTTTTCGCTGTTCTCAACTTCGCAACCGCAGCAGTCTCAGCAGTTATTTCAATCGCAGCCACAATCACAGCCGCAACTTTTTCAGCAGAGCAGCGCATTGTTCTCACAGCAGCCACAGCAATTTCAACTGCAACAGCAGCAGTTAATGCAGCAACAGCAGCAGTTAATGCAGCAACAGCAGCAGTTGTTCATTTTTACTAATGATAAGGCTCCTGCAAGTTATGGTACTAAGTGGGCGGACCTCCATCCAGATTCGCAGAAAATCCTCATTCAGATAGAGGAACGAATTTTGGAGTATCGGGATGAAAGTCAGAGGCTGGATCAGTGTAGTCGCCTCTACGATTCTTCAGTTTCTAATGATGGATTTGAGCTTGATGCCAGTCGAATTGTTCAGGAACTTGGGGGAATTAGTACGTCTACAGAACATCAAAAAGTACTGCTTCAAGAGCTGATGACTACTGCGAAAGGGATGCTTTGGAACACGGAAGTTGCTATTCGCTCTTTCATGAAGATACGCCCAAGGTTCCTTAATCAGAGTGAAGGAGGTGCTTCAAATTCCACTGCACCGCCACAGGTCTCTGGAGCAACATCACCAATAGGTTCTAGTGGTCAACCGACATCTACCTCAATTGCTCCAGTTTTTGATTTCTACAGTGGGCTCCCAAGTAAACCATCTCCATTTTTGCAACAAACTGTTTCAAGATTTGAGAAGTATCTTGGTGAATGTCGCCAGTGGATTGAAGAGTTAGAGCAATTCCTTGCCCTAGATTCTAATAGGAGTGCTTCCAATTCTAGCACTTCATTGTTTCATTCACTTCCTAAAATCATGTCAAATGTGCACGAATTCTTTGTTCATGTGGCTGCCAAGGTTGAGAGCATTCATCAGTACATTGACTCAATGAAGGCGGCTTATCTTGCGGACCAGCGTTGCAGAGGGGATGGAAACAATCCCTTTCTTGAGGCTGATCGGAGGGAAACTGCACGCCAAGAAGCGGCAGCTAAGAGGGTACATCCAACTTTACATTTGACTGCAAATACACAACCATCAACACAAGCTGCTGGATTACTTGCCAGCTCAGGTAGCCATGGTGCGTCAACAGTACAACAGTTGTCTACAGTTGCTACACCAGCTTCTTCCGGTGGTGGATTGTCACTATTTAGCACTCCCTCTGCTCCATCCACTACATCATCTTCTCTTTTCATGACACCAACAGCATCTGTTCAAACATCCTCTCTGTTTAGTTCTTCTGGTGCAACAGGTCCTACAACACTTTTTGGCTCGTCATCTGCACCATTGTTTAATTCTGCTATTACTCCCTTTGGCAGTACTGCTCAATCTTTTGGGCAATCTGCTTCTGCAGGAAGTTCACTATTTTCGACACCCTTTGCTTCAGAAATCATCGAAGCCAAAGTCCCGAACGGCACGACGCTACTAGTCATAAATGACCATGGGTAG

Protein sequence

MAFSLFSTSQPQQSQQLFQSQPQSQPQLFQQSSALFSQQPQQFQLQQQQLMQQQQQLMQQQQQLFIFTNDKAPASYGTKWADLHPDSQKILIQIEERILEYRDESQRLDQCSRLYDSSVSNDGFELDASRIVQELGGISTSTEHQKVLLQELMTTAKGMLWNTEVAIRSFMKIRPRFLNQSEGGASNSTAPPQVSGATSPIGSSGQPTSTSIAPVFDFYSGLPSKPSPFLQQTVSRFEKYLGECRQWIEELEQFLALDSNRSASNSSTSLFHSLPKIMSNVHEFFVHVAAKVESIHQYIDSMKAAYLADQRCRGDGNNPFLEADRRETARQEAAAKRVHPTLHLTANTQPSTQAAGLLASSGSHGASTVQQLSTVATPASSGGGLSLFSTPSAPSTTSSSLFMTPTASVQTSSLFSSSGATGPTTLFGSSSAPLFNSAITPFGSTAQSFGQSASAGSSLFSTPFASEIIEAKVPNGTTLLVINDHG

Homology

[Close]

BLAST of Carg00864 vs. NCBI nr
Match: XP_022949627.1 (nuclear pore complex protein NUP58 isoform X2 [Cucurbita moschata])

HSP 1 Score: 699.1 bits (1803), Expect = 1.0e-197
Identity = 457/466 (98.07%), Postives = 457/466 (98.07%), Query Frame = 0


Query: 1   MAFSLFSTSQPQQSQQLFQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MAFSLFSTSQPQQSQQLFQ       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MAFSLFSTSQPQQSQQLFQ-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXIFTNDKAPASYGTKWADLHPDSQKILIQIEERILEYRDESQRLDQCSRLYDSSVS 120
           XXXXXIFTNDKAPASYGTKWADLHPDSQKILIQIEERILEYRDESQRLDQCSRLYDSSVS
Sbjct: 61  XXXXXIFTNDKAPASYGTKWADLHPDSQKILIQIEERILEYRDESQRLDQCSRLYDSSVS 120

Query: 121 NDGFELDASRIVQELGGISTSTEHQKVLLQELMTTAKGMLWNTEVAIRSFMKIRPRFLNQ 180
           NDGFELDASRIVQELGGISTSTEHQKVLLQELMTTAKGMLWNTEVAIRSFMKIRPRFLNQ
Sbjct: 121 NDGFELDASRIVQELGGISTSTEHQKVLLQELMTTAKGMLWNTEVAIRSFMKIRPRFLNQ 180

Query: 181 SEGGASNSTAPPQVSGATSPIGSSGQPTSTSIAPVFDFYSGLPSKPSPFLQQTVSRFEKY 240
           SEGGASNSTAPPQVSGATSPIGSSGQPTSTSIAPVFDFYSGLPSKPSPFLQQTVSRFEKY
Sbjct: 181 SEGGASNSTAPPQVSGATSPIGSSGQPTSTSIAPVFDFYSGLPSKPSPFLQQTVSRFEKY 240

Query: 241 LGECRQWIEELEQFLALDSNRSASNSSTSLFHSLPKIMSNVHEFFVHVAAKVESIHQYID 300
           LGECRQWIEELEQFLALDSNRSASNSSTSLFHSLPKIMSNVHEFFVHVAAKVESIHQYID
Sbjct: 241 LGECRQWIEELEQFLALDSNRSASNSSTSLFHSLPKIMSNVHEFFVHVAAKVESIHQYID 300

Query: 301 SMKAAYLADQRCRGDGNNPFLEADRRETARQEAAAKRVHPTLHLTANTQPSTQAAGLLAS 360
           SMKAAYLADQRCRGDGNNPFLEADRRETARQEAAAKRVHPTLHLTANTQPSTQAAGLLAS
Sbjct: 301 SMKAAYLADQRCRGDGNNPFLEADRRETARQEAAAKRVHPTLHLTANTQPSTQAAGLLAS 360

Query: 361 SGSHGASTVQQLSTVATPASSGGGLSLFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           SGSHGASTVQQLSTVATPASSGGGLSLFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 SGSHGASTVQQLSTVATPASSGGGLSLFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXPTTLFGSSSAPLFNSAITPFGSTAQSFGQSASAGSSLFSTPFAS 467
           XX  TLFGSSSAPLFNSAITPFGSTAQSFGQSASAGSSLFSTPFAS
Sbjct: 421 XXXXTLFGSSSAPLFNSAITPFGSTAQSFGQSASAGSSLFSTPFAS 459

[Close]

BLAST of Carg00864 vs. NCBI nr
Match: XP_022949626.1 (nuclear pore complex protein NUP58 isoform X1 [Cucurbita moschata])

HSP 1 Score: 675.6 bits (1742), Expect = 1.2e-190
Identity = 442/449 (98.44%), Postives = 442/449 (98.44%), Query Frame = 0


Query: 1   MAFSLFSTSQPQQSQQLFQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MAFSLFSTSQPQQSQQLFQ       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MAFSLFSTSQPQQSQQLFQ-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXIFTNDKAPASYGTKWADLHPDSQKILIQIEERILEYRDESQRLDQCSRLYDSSVS 120
           XXXXXIFTNDKAPASYGTKWADLHPDSQKILIQIEERILEYRDESQRLDQCSRLYDSSVS
Sbjct: 61  XXXXXIFTNDKAPASYGTKWADLHPDSQKILIQIEERILEYRDESQRLDQCSRLYDSSVS 120

Query: 121 NDGFELDASRIVQELGGISTSTEHQKVLLQELMTTAKGMLWNTEVAIRSFMKIRPRFLNQ 180
           NDGFELDASRIVQELGGISTSTEHQKVLLQELMTTAKGMLWNTEVAIRSFMKIRPRFLNQ
Sbjct: 121 NDGFELDASRIVQELGGISTSTEHQKVLLQELMTTAKGMLWNTEVAIRSFMKIRPRFLNQ 180

Query: 181 SEGGASNSTAPPQVSGATSPIGSSGQPTSTSIAPVFDFYSGLPSKPSPFLQQTVSRFEKY 240
           SEGGASNSTAPPQVSGATSPIGSSGQPTSTSIAPVFDFYSGLPSKPSPFLQQTVSRFEKY
Sbjct: 181 SEGGASNSTAPPQVSGATSPIGSSGQPTSTSIAPVFDFYSGLPSKPSPFLQQTVSRFEKY 240

Query: 241 LGECRQWIEELEQFLALDSNRSASNSSTSLFHSLPKIMSNVHEFFVHVAAKVESIHQYID 300
           LGECRQWIEELEQFLALDSNRSASNSSTSLFHSLPKIMSNVHEFFVHVAAKVESIHQYID
Sbjct: 241 LGECRQWIEELEQFLALDSNRSASNSSTSLFHSLPKIMSNVHEFFVHVAAKVESIHQYID 300

Query: 301 SMKAAYLADQRCRGDGNNPFLEADRRETARQEAAAKRVHPTLHLTANTQPSTQAAGLLAS 360
           SMKAAYLADQRCRGDGNNPFLEADRRETARQEAAAKRVHPTLHLTANTQPSTQAAGLLAS
Sbjct: 301 SMKAAYLADQRCRGDGNNPFLEADRRETARQEAAAKRVHPTLHLTANTQPSTQAAGLLAS 360

Query: 361 SGSHGASTVQQLSTVATPASSGGGLSLFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           SGSHGASTVQQLSTVATPASSGGGLSLFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 SGSHGASTVQQLSTVATPASSGGGLSLFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXPTTLFGSSSAPLFNSAITPFGSTAQSF 450
           XXPTTLFGSSSAPLFNSAITPFGSTAQSF
Sbjct: 421 XXPTTLFGSSSAPLFNSAITPFGSTAQSF 442

[Close]

BLAST of Carg00864 vs. NCBI nr
Match: XP_022979120.1 (nuclear pore complex protein NUP58-like [Cucurbita maxima])

HSP 1 Score: 655.6 bits (1690), Expect = 1.3e-184
Identity = 416/455 (91.43%), Postives = 417/455 (91.65%), Query Frame = 0


Query: 1   MAFSLFSTSQPQQSQQLFQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MAFSLFST QPQQSQQLFQ    XXXXXXXXXXXXX       XXXXXXXXXXXXXXXXX
Sbjct: 1   MAFSLFSTPQPQQSQQLFQ---SXXXXXXXXXXXXXALFSQKPXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXIFTNDKAPASYGTKWADLHPDSQKILIQIEERILEYRDESQRLDQCSRLYDSSVS 120
           XXXXX FT DKAPASYGTKWADLHPDSQKIL+QIEERILEYRDESQRLDQCSRLYD SVS
Sbjct: 61  XXXXXXFTYDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLDQCSRLYDPSVS 120

Query: 121 NDGFELDASRIVQELGGISTSTEHQKVLLQELMTTAKGMLWNTEVAIRSFMKIRPRFLNQ 180
           NDGFELDASRIVQELGGISTSTEHQKVLLQELMTTAKGMLWNTEVAIRSFM IRPRFLNQ
Sbjct: 121 NDGFELDASRIVQELGGISTSTEHQKVLLQELMTTAKGMLWNTEVAIRSFMMIRPRFLNQ 180

Query: 181 SEGGASNSTAPPQVSGATSPIGSSGQPTSTSIAPVFDFYSGLPSKPSPFLQQTVSRFEKY 240
           S GGASNSTA PQVSGATSPIGSSGQPTSTSIAPVFDFY GLP KPSPFLQQTVSRFEKY
Sbjct: 181 SAGGASNSTASPQVSGATSPIGSSGQPTSTSIAPVFDFYRGLPRKPSPFLQQTVSRFEKY 240

Query: 241 LGECRQWIEELEQFLALDSNRSASNSSTSLFHSLPKIMSNVHEFFVHVAAKVESIHQYID 300
           LGECRQWIEELEQFLALDSNRSASNSSTSLFHSLPKIMSNVHEFFVHVAAKVESIHQYID
Sbjct: 241 LGECRQWIEELEQFLALDSNRSASNSSTSLFHSLPKIMSNVHEFFVHVAAKVESIHQYID 300

Query: 301 SMKAAYLADQRCRGDGNNPFLEADRRETARQEAAAKRVHPTLHLTANTQPSTQAAGLLAS 360
           SMKA YLADQRCRGDGNNPFLEADRRETARQEAAAKRVHPT HL ANTQPSTQAAGLLAS
Sbjct: 301 SMKATYLADQRCRGDGNNPFLEADRRETARQEAAAKRVHPTSHLPANTQPSTQAAGLLAS 360

Query: 361 SGSHGASTVQQLSTVATPASSGGGLSLFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           SGSHGASTVQQLSTVATPAS GGGLSLFS         XXXXXXXXXXXXXXXXXXX   
Sbjct: 361 SGSHGASTVQQLSTVATPASFGGGLSLFSTPSAPSTTSXXXXXXXXXXXXXXXXXXXSGA 420

Query: 421 XXPTTLFGSSSAPLFNSAITPFGSTAQSFGQSASA 456
             PTTLFGSSSAPLFNSAITPFGSTAQSFGQSASA
Sbjct: 421 TGPTTLFGSSSAPLFNSAITPFGSTAQSFGQSASA 452

[Close]

BLAST of Carg00864 vs. NCBI nr
Match: XP_023543262.1 (nuclear pore complex protein NUP58-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 653.3 bits (1684), Expect = 6.5e-184
Identity = 409/449 (91.09%), Postives = 410/449 (91.31%), Query Frame = 0


Query: 1   MAFSLFSTSQPQQSQQLFQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MAFSLFST QPQQSQQLFQ                       XXXXXXXXXXXXXXXXXX
Sbjct: 1   MAFSLFSTPQPQQSQQLFQ-------------SQPQSQPQLFXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXIFTNDKAPASYGTKWADLHPDSQKILIQIEERILEYRDESQRLDQCSRLYDSSVS 120
           XXXXX  TNDKAPASYGTKWADLHPDSQK L+QIEERILE RDESQRLDQCSRLYDSSVS
Sbjct: 61  XXXXXXXTNDKAPASYGTKWADLHPDSQKTLLQIEERILECRDESQRLDQCSRLYDSSVS 120

Query: 121 NDGFELDASRIVQELGGISTSTEHQKVLLQELMTTAKGMLWNTEVAIRSFMKIRPRFLNQ 180
           NDGFELDASRIVQELGGISTSTEHQKVLLQELMTTAKGMLWNTEVAIRSFM IRPRFLNQ
Sbjct: 121 NDGFELDASRIVQELGGISTSTEHQKVLLQELMTTAKGMLWNTEVAIRSFMMIRPRFLNQ 180

Query: 181 SEGGASNSTAPPQVSGATSPIGSSGQPTSTSIAPVFDFYSGLPSKPSPFLQQTVSRFEKY 240
           SEGGASNSTAPPQVSGATSPIGSSGQPTSTSIAPVF FYSGLP KPSPFLQQTVSRFEKY
Sbjct: 181 SEGGASNSTAPPQVSGATSPIGSSGQPTSTSIAPVFYFYSGLPRKPSPFLQQTVSRFEKY 240

Query: 241 LGECRQWIEELEQFLALDSNRSASNSSTSLFHSLPKIMSNVHEFFVHVAAKVESIHQYID 300
           LGECRQWIEELEQFLALD NRSASNSSTSLFHSLPKIMSNVHEFFVHVAAKVESIHQYID
Sbjct: 241 LGECRQWIEELEQFLALDCNRSASNSSTSLFHSLPKIMSNVHEFFVHVAAKVESIHQYID 300

Query: 301 SMKAAYLADQRCRGDGNNPFLEADRRETARQEAAAKRVHPTLHLTANTQPSTQAAGLLAS 360
           SMKAAYLADQRCRGDGNNPFLEADRRETARQEAAAKRVHPTLHLTANTQPSTQAAGLLAS
Sbjct: 301 SMKAAYLADQRCRGDGNNPFLEADRRETARQEAAAKRVHPTLHLTANTQPSTQAAGLLAS 360

Query: 361 SGSHGASTVQQLSTVATPASSGGGLSLFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           SGSHGASTVQQLSTVATPASSGGGLSLFS  XXXXXXXXXXXXXXXXXXXXXXXXXX   
Sbjct: 361 SGSHGASTVQQLSTVATPASSGGGLSLFSTPXXXXXXXXXXXXXXXXXXXXXXXXXXSGA 420

Query: 421 XXPTTLFGSSSAPLFNSAITPFGSTAQSF 450
             PTTLFGSSSAPLFNSAITPFGSTAQSF
Sbjct: 421 RGPTTLFGSSSAPLFNSAITPFGSTAQSF 436

[Close]

BLAST of Carg00864 vs. NCBI nr
Match: XP_022949628.1 (nuclear pore complex protein NUP58 isoform X3 [Cucurbita moschata])

HSP 1 Score: 600.5 bits (1547), Expect = 5.0e-168
Identity = 354/354 (100.00%), Postives = 354/354 (100.00%), Query Frame = 0


Query: 96  ERILEYRDESQRLDQCSRLYDSSVSNDGFELDASRIVQELGGISTSTEHQKVLLQELMTT 155
           ERILEYRDESQRLDQCSRLYDSSVSNDGFELDASRIVQELGGISTSTEHQKVLLQELMTT
Sbjct: 6   ERILEYRDESQRLDQCSRLYDSSVSNDGFELDASRIVQELGGISTSTEHQKVLLQELMTT 65

Query: 156 AKGMLWNTEVAIRSFMKIRPRFLNQSEGGASNSTAPPQVSGATSPIGSSGQPTSTSIAPV 215
           AKGMLWNTEVAIRSFMKIRPRFLNQSEGGASNSTAPPQVSGATSPIGSSGQPTSTSIAPV
Sbjct: 66  AKGMLWNTEVAIRSFMKIRPRFLNQSEGGASNSTAPPQVSGATSPIGSSGQPTSTSIAPV 125

Query: 216 FDFYSGLPSKPSPFLQQTVSRFEKYLGECRQWIEELEQFLALDSNRSASNSSTSLFHSLP 275
           FDFYSGLPSKPSPFLQQTVSRFEKYLGECRQWIEELEQFLALDSNRSASNSSTSLFHSLP
Sbjct: 126 FDFYSGLPSKPSPFLQQTVSRFEKYLGECRQWIEELEQFLALDSNRSASNSSTSLFHSLP 185

Query: 276 KIMSNVHEFFVHVAAKVESIHQYIDSMKAAYLADQRCRGDGNNPFLEADRRETARQEAAA 335
           KIMSNVHEFFVHVAAKVESIHQYIDSMKAAYLADQRCRGDGNNPFLEADRRETARQEAAA
Sbjct: 186 KIMSNVHEFFVHVAAKVESIHQYIDSMKAAYLADQRCRGDGNNPFLEADRRETARQEAAA 245

Query: 336 KRVHPTLHLTANTQPSTQAAGLLASSGSHGASTVQQLSTVATPASSGGGLSLFSXXXXXX 395
           KRVHPTLHLTANTQPSTQAAGLLASSGSHGASTVQQLSTVATPASSGGGLSLFSXXXXXX
Sbjct: 246 KRVHPTLHLTANTQPSTQAAGLLASSGSHGASTVQQLSTVATPASSGGGLSLFSXXXXXX 305

Query: 396 XXXXXXXXXXXXXXXXXXXXXXXXXXXPTTLFGSSSAPLFNSAITPFGSTAQSF 450
           XXXXXXXXXXXXXXXXXXXXXXXXXXXPTTLFGSSSAPLFNSAITPFGSTAQSF
Sbjct: 306 XXXXXXXXXXXXXXXXXXXXXXXXXXXPTTLFGSSSAPLFNSAITPFGSTAQSF 359

[Close]

BLAST of Carg00864 vs. TAIR10
Match: AT4G37130.1 (hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 393.3 bits (1009), Expect = 2.2e-109
Identity = 212/327 (64.83%), Postives = 254/327 (77.68%), Query Frame = 0


Query: 66  IFTNDKAPASYGTKWADLHPDSQKILIQIEERILEYRDESQRLDQCSRLYDSSVSNDGFE 125
           +FTNDKAPA+Y TKWADLHPDSQK+L+QIEE+ILE+R ESQRLDQCSRLYDSSVS++GFE
Sbjct: 95  LFTNDKAPANYSTKWADLHPDSQKLLLQIEEKILEHRSESQRLDQCSRLYDSSVSSEGFE 154

Query: 126 LDASRIVQELGGISTSTEHQKVLLQELMTTAKGMLWNTEVAIRSFMKIRPRFLNQSEGG- 185
            DASRIVQELGGI+T+ + QK +L ELM  AK ML N E+A+RSFM ++PRF +  +GG 
Sbjct: 155 FDASRIVQELGGINTAMDRQKAVLHELMIVAKDMLRNAEIAVRSFMMLQPRFPHWKQGGG 214

Query: 186 -ASNSTAPPQVSGATSPIGSSGQPTS-TSIAPVFDFYSGLPSKPSPFLQQTVSRFEKYLG 245
             S  + P Q  G      SSGQ  + T+   V DFY G+P KP+ FL QTV RFEKYL 
Sbjct: 215 VVSVGSQPSQGQGTNPAPASSGQQQAVTTTVQVSDFYRGIPKKPTAFLLQTVVRFEKYLN 274

Query: 246 ECRQWIEELEQFLALDSNRSASNSSTSLFHSLPKIMSNVHEFFVHVAAKVESIHQYIDSM 305
           ECRQW+EELEQ LALDS++ + ++  SL  SLPK+MSNVH+FFVHVAAKVESIHQYI+SM
Sbjct: 275 ECRQWVEELEQLLALDSDKYSRHA--SLLESLPKVMSNVHDFFVHVAAKVESIHQYIESM 334

Query: 306 KAAYLADQRCRGDGNNPFLEADRRETARQEAAAKRVHPTLHL---TANTQPSTQAAGLLA 365
           + +YLADQR RG+ ++PFLEADRRETA+QEAAAKRVHPTLHL   T +TQPSTQ AGL+A
Sbjct: 335 RTSYLADQRRRGECHDPFLEADRRETAKQEAAAKRVHPTLHLPASTTSTQPSTQVAGLIA 394

Query: 366 SSGSHGASTVQQLSTVATPASSGGGLS 387
           SS + G S   Q S   +  SSG G S
Sbjct: 395 SSATPGGSNPPQTSVPTSNPSSGAGFS 419

[Close]

BLAST of Carg00864 vs. Swiss-Prot
Match: sp|Q8RWH9|NUP58_ARATH (Nuclear pore complex protein NUP58 OS=Arabidopsis thaliana OX=3702 GN=NUP58 PE=1 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 4.0e-108
Identity = 212/327 (64.83%), Postives = 254/327 (77.68%), Query Frame = 0


Query: 66  IFTNDKAPASYGTKWADLHPDSQKILIQIEERILEYRDESQRLDQCSRLYDSSVSNDGFE 125
           +FTNDKAPA+Y TKWADLHPDSQK+L+QIEE+ILE+R ESQRLDQCSRLYDSSVS++GFE
Sbjct: 95  LFTNDKAPANYSTKWADLHPDSQKLLLQIEEKILEHRSESQRLDQCSRLYDSSVSSEGFE 154

Query: 126 LDASRIVQELGGISTSTEHQKVLLQELMTTAKGMLWNTEVAIRSFMKIRPRFLNQSEGG- 185
            DASRIVQELGGI+T+ + QK +L ELM  AK ML N E+A+RSFM ++PRF +  +GG 
Sbjct: 155 FDASRIVQELGGINTAMDRQKAVLHELMIVAKDMLRNAEIAVRSFMMLQPRFPHWKQGGG 214

Query: 186 -ASNSTAPPQVSGATSPIGSSGQPTS-TSIAPVFDFYSGLPSKPSPFLQQTVSRFEKYLG 245
             S  + P Q  G      SSGQ  + T+   V DFY G+P KP+ FL QTV RFEKYL 
Sbjct: 215 VVSVGSQPSQGQGTNPAPASSGQQQAVTTTVQVSDFYRGIPKKPTAFLLQTVVRFEKYLN 274

Query: 246 ECRQWIEELEQFLALDSNRSASNSSTSLFHSLPKIMSNVHEFFVHVAAKVESIHQYIDSM 305
           ECRQW+EELEQ LALDS++ + ++  SL  SLPK+MSNVH+FFVHVAAKVESIHQYI+SM
Sbjct: 275 ECRQWVEELEQLLALDSDKYSRHA--SLLESLPKVMSNVHDFFVHVAAKVESIHQYIESM 334

Query: 306 KAAYLADQRCRGDGNNPFLEADRRETARQEAAAKRVHPTLHL---TANTQPSTQAAGLLA 365
           + +YLADQR RG+ ++PFLEADRRETA+QEAAAKRVHPTLHL   T +TQPSTQ AGL+A
Sbjct: 335 RTSYLADQRRRGECHDPFLEADRRETAKQEAAAKRVHPTLHLPASTTSTQPSTQVAGLIA 394

Query: 366 SSGSHGASTVQQLSTVATPASSGGGLS 387
           SS + G S   Q S   +  SSG G S
Sbjct: 395 SSATPGGSNPPQTSVPTSNPSSGAGFS 419

[Close]

BLAST of Carg00864 vs. Swiss-Prot
Match: sp|P84752|PERA_ALOVR (Peroxidase A (Fragments) OS=Aloe vera OX=34199 PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 4.4e-06
Identity = 24/33 (72.73%), Postives = 30/33 (90.91%), Query Frame = 0


Query: 276 KIMSNVHEFFVHVAAKVESIHQYIDSMKAAYLA 309
           ++MSNVH+FFVHVAAKVESIHQYI+SM+   L+
Sbjct: 79  RVMSNVHDFFVHVAAKVESIHQYIESMRYGSLS 111

[Close]

BLAST of Carg00864 vs. TrEMBL
Match: tr|A0A1S3B190|A0A1S3B190_CUCME (nuclear pore complex protein NUP58 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484746 PE=4 SV=1)

HSP 1 Score: 575.1 bits (1481), Expect = 1.5e-160
Identity = 355/393 (90.33%), Postives = 368/393 (93.64%), Query Frame = 0


Query: 1   MAFSLFSTSQPQQSQQLFQ----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MAFSLFST QPQQ QQLFQ    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MAFSLFSTPQPQQPQQLFQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXIFTNDKAPASYGTKWADLHPDSQKILIQIEERILEYRDESQRLDQCSRLYD 120
           XXXXXXXX IFTNDKAPASYGTKWADLHPDSQKIL+QIEERILEYRDESQRLDQCSRLYD
Sbjct: 61  XXXXXXXXFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLDQCSRLYD 120

Query: 121 SSVSNDGFELDASRIVQELGGISTSTEHQKVLLQELMTTAKGMLWNTEVAIRSFMKIRPR 180
           SSVSNDGFELDASRIVQELGGIS STEHQKV+LQELM  AK MLWNTEVAIRSFM IRPR
Sbjct: 121 SSVSNDGFELDASRIVQELGGISASTEHQKVMLQELMAAAKEMLWNTEVAIRSFMMIRPR 180

Query: 181 FLNQSEGGASNSTAPPQVSGATSPIGSSGQPTSTSIAPVFDFYSGLPSKPSPFLQQTVSR 240
           FL+QS  GASN TAP QVSGAT+P+G SGQPTSTSIAPVFDFYSGLP KPSPFLQQTVSR
Sbjct: 181 FLHQSARGASNPTAPSQVSGATTPLGPSGQPTSTSIAPVFDFYSGLPRKPSPFLQQTVSR 240

Query: 241 FEKYLGECRQWIEELEQFLALDSNRSASNSSTSLFHSLPKIMSNVHEFFVHVAAKVESIH 300
           FEKYLGECRQWIE+LEQ L LDSNRSASNSS+SLF SLPKIMSNVHEFFVHVAAKVESIH
Sbjct: 241 FEKYLGECRQWIEDLEQLLILDSNRSASNSSSSLFQSLPKIMSNVHEFFVHVAAKVESIH 300

Query: 301 QYIDSMKAAYLADQRCRGDGNNPFLEADRRETARQEAAAKRVHPTLHLTANTQPSTQAAG 360
           QYI+SMK+AYLADQR RGDGNNPFLEADRRETARQEAAAKR HPTLHL AN+QPSTQAAG
Sbjct: 301 QYIESMKSAYLADQRRRGDGNNPFLEADRRETARQEAAAKRAHPTLHLPANSQPSTQAAG 360

Query: 361 LLASSGSHGASTVQQLSTVATPASSGGGLSLFS 390
           LLA+SG+HGAST+QQ STVATPASSGGGLSLFS
Sbjct: 361 LLANSGNHGASTIQQSSTVATPASSGGGLSLFS 393

[Close]

BLAST of Carg00864 vs. TrEMBL
Match: tr|A0A0A0KI61|A0A0A0KI61_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G490040 PE=4 SV=1)

HSP 1 Score: 568.2 bits (1463), Expect = 1.8e-158
Identity = 353/400 (88.25%), Postives = 366/400 (91.50%), Query Frame = 0


Query: 1   MAFSLFSTSQPQQSQQLFQ-----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MAFSLFST QPQQ QQLFQ           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MAFSLFSTPQPQQPQQLFQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXIFTNDKAPASYGTKWADLHPDSQKILIQIEERILEYRDESQRLD 120
           XXXXXXXXXXXXXXXXIFTNDKAPASYGTKWADLHPDSQKIL+QIEERILEYRDESQRLD
Sbjct: 61  XXXXXXXXXXXXXXXXIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLD 120

Query: 121 QCSRLYDSSVSNDGFELDASRIVQELGGISTSTEHQKVLLQELMTTAKGMLWNTEVAIRS 180
           QCSRLYDSSVSNDGFE DASRIVQELGGIS STEHQKV+LQELM  AK MLWNTEVAIRS
Sbjct: 121 QCSRLYDSSVSNDGFEFDASRIVQELGGISASTEHQKVMLQELMAAAKEMLWNTEVAIRS 180

Query: 181 FMKIRPRFLNQSEGGASNSTAPPQVSGATSPIGSSGQPTSTSIAPVFDFYSGLPSKPSPF 240
           FM IRPRFL+QS GGASN TAP QV GAT+P+GSSGQPTSTSIAPVFDFYSGLP KPSPF
Sbjct: 181 FMMIRPRFLHQSAGGASNPTAPSQVPGATTPLGSSGQPTSTSIAPVFDFYSGLPRKPSPF 240

Query: 241 LQQTVSRFEKYLGECRQWIEELEQFLALDSNRSASNSSTSLFHSLPKIMSNVHEFFVHVA 300
           LQQTVSRFEKYL ECRQWIE+LEQ L LDSNRSASNSS+SLF SLPKIMSNVHEFFVHVA
Sbjct: 241 LQQTVSRFEKYLAECRQWIEDLEQLLVLDSNRSASNSSSSLFQSLPKIMSNVHEFFVHVA 300

Query: 301 AKVESIHQYIDSMKAAYLADQRCRGDGNNPFLEADRRETARQEAAAKRVHPTLHLTANTQ 360
           +KVESIHQYI+SMK+AYLADQR RGDGNNPFLEADRRETARQEAAAKR HPTLHL  N+Q
Sbjct: 301 SKVESIHQYIESMKSAYLADQRRRGDGNNPFLEADRRETARQEAAAKRAHPTLHLPTNSQ 360

Query: 361 PSTQAAGLLASSGSHGASTVQQLSTVATPASSGGGLSLFS 390
           PSTQA GLLA+SG+HGASTVQQ STVATPASSGGGLSLFS
Sbjct: 361 PSTQATGLLANSGNHGASTVQQSSTVATPASSGGGLSLFS 400

[Close]

BLAST of Carg00864 vs. TrEMBL
Match: tr|A0A1S3B1D2|A0A1S3B1D2_CUCME (nuclear pore complex protein NUP58 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484746 PE=4 SV=1)

HSP 1 Score: 505.8 bits (1301), Expect = 1.1e-139
Identity = 264/294 (89.80%), Postives = 276/294 (93.88%), Query Frame = 0


Query: 96  ERILEYRDESQRLDQCSRLYDSSVSNDGFELDASRIVQELGGISTSTEHQKVLLQELMTT 155
           ERILEYRDESQRLDQCSRLYDSSVSNDGFELDASRIVQELGGIS STEHQKV+LQELM  
Sbjct: 6   ERILEYRDESQRLDQCSRLYDSSVSNDGFELDASRIVQELGGISASTEHQKVMLQELMAA 65

Query: 156 AKGMLWNTEVAIRSFMKIRPRFLNQSEGGASNSTAPPQVSGATSPIGSSGQPTSTSIAPV 215
           AK MLWNTEVAIRSFM IRPRFL+QS  GASN TAP QVSGAT+P+G SGQPTSTSIAPV
Sbjct: 66  AKEMLWNTEVAIRSFMMIRPRFLHQSARGASNPTAPSQVSGATTPLGPSGQPTSTSIAPV 125

Query: 216 FDFYSGLPSKPSPFLQQTVSRFEKYLGECRQWIEELEQFLALDSNRSASNSSTSLFHSLP 275
           FDFYSGLP KPSPFLQQTVSRFEKYLGECRQWIE+LEQ L LDSNRSASNSS+SLF SLP
Sbjct: 126 FDFYSGLPRKPSPFLQQTVSRFEKYLGECRQWIEDLEQLLILDSNRSASNSSSSLFQSLP 185

Query: 276 KIMSNVHEFFVHVAAKVESIHQYIDSMKAAYLADQRCRGDGNNPFLEADRRETARQEAAA 335
           KIMSNVHEFFVHVAAKVESIHQYI+SMK+AYLADQR RGDGNNPFLEADRRETARQEAAA
Sbjct: 186 KIMSNVHEFFVHVAAKVESIHQYIESMKSAYLADQRRRGDGNNPFLEADRRETARQEAAA 245

Query: 336 KRVHPTLHLTANTQPSTQAAGLLASSGSHGASTVQQLSTVATPASSGGGLSLFS 390
           KR HPTLHL AN+QPSTQAAGLLA+SG+HGAST+QQ STVATPASSGGGLSLFS
Sbjct: 246 KRAHPTLHLPANSQPSTQAAGLLANSGNHGASTIQQSSTVATPASSGGGLSLFS 299

[Close]

BLAST of Carg00864 vs. TrEMBL
Match: tr|A0A2P4KIU2|A0A2P4KIU2_QUESU (Nuclear pore complex protein nup58 OS=Quercus suber OX=58331 GN=CFP56_06822 PE=4 SV=1)

HSP 1 Score: 478.8 bits (1231), Expect = 1.5e-131
Identity = 248/324 (76.54%), Postives = 278/324 (85.80%), Query Frame = 0


Query: 66  IFTNDKAPASYGTKWADLHPDSQKILIQIEERILEYRDESQRLDQCSRLYDSSVSNDGFE 125
           +FTNDK PA+Y TKW+DLHP+SQKIL+QIEERIL YRDESQRLDQC+RLYDSSVSN+GFE
Sbjct: 82  LFTNDKTPANYSTKWSDLHPESQKILLQIEERILGYRDESQRLDQCNRLYDSSVSNEGFE 141

Query: 126 LDASRIVQELGGISTSTEHQKVLLQELMTTAKGMLWNTEVAIRSFMKIRPRFLNQSEGGA 185
           LDAS IVQELGGIST+ E QK LLQELM+  K ML NTEVA+RSFM +RPRFL+ + GGA
Sbjct: 142 LDASHIVQELGGISTAMERQKALLQELMSVVKDMLRNTEVAVRSFMMLRPRFLHPNSGGA 201

Query: 186 SNSTAPPQVSGATSPIGSSGQPTSTSIAPVFDFYSGLPSKPSPFLQQTVSRFEKYLGECR 245
           SN+T P Q  G T P GSS Q  + SI PVFDFYSG+P KPSPFLQQTVSRFEKYLGECR
Sbjct: 202 SNATVPSQAPGPTGPSGSSSQTAANSIVPVFDFYSGVPRKPSPFLQQTVSRFEKYLGECR 261

Query: 246 QWIEELEQFLALDSNRSASNSSTSLFHSLPKIMSNVHEFFVHVAAKVESIHQYIDSMKAA 305
           QW+EELEQ L LDS+R++SN  +SL  SLPK+MSNVH+FFVHVAAKVESIHQYI+SMKAA
Sbjct: 262 QWVEELEQLLLLDSDRNSSNFRSSLLLSLPKVMSNVHDFFVHVAAKVESIHQYIESMKAA 321

Query: 306 YLADQRCRGDGNNPFLEADRRETARQEAAAKRVHPTLHLTANTQPSTQAAGLLASSGSHG 365
           YLADQR RGDGN+PFLEADRRETARQEAAAKRVHPTL+L A +QPSTQ AGLL+SSG+ G
Sbjct: 322 YLADQRRRGDGNDPFLEADRRETARQEAAAKRVHPTLNLPAKSQPSTQVAGLLSSSGTQG 381

Query: 366 -ASTVQQLSTVATPASSGGGLSLF 389
            +ST QQ S   T ASSG GLSLF
Sbjct: 382 VSSTAQQTSAATTFASSGSGLSLF 405

[Close]

BLAST of Carg00864 vs. TrEMBL
Match: tr|A0A0L9UR63|A0A0L9UR63_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan06g037300 PE=4 SV=1)

HSP 1 Score: 468.4 bits (1204), Expect = 2.0e-128
Identity = 244/324 (75.31%), Postives = 271/324 (83.64%), Query Frame = 0


Query: 66  IFTNDKAPASYGTKWADLHPDSQKILIQIEERILEYRDESQRLDQCSRLYDSSVSNDGFE 125
           +FTNDK PASY T WADLHPDSQKIL+QIEERILEYRDESQRLDQCSRLYDSSVSNDGFE
Sbjct: 55  LFTNDKTPASYSTNWADLHPDSQKILLQIEERILEYRDESQRLDQCSRLYDSSVSNDGFE 114

Query: 126 LDASRIVQELGGISTSTEHQKVLLQELMTTAKGMLWNTEVAIRSFMKIRPRFLNQSEGGA 185
           LDA  IVQELGGIST  E QK LLQELM+T K ML NTEVA+RSFM +RPRFL+ S GG+
Sbjct: 115 LDAGHIVQELGGISTGMERQKTLLQELMSTVKEMLRNTEVAVRSFMILRPRFLHPS-GGS 174

Query: 186 SNSTAPPQVSGATSPIGSSGQPTSTSIAPVFDFYSGLPSKPSPFLQQTVSRFEKYLGECR 245
           S++TAP Q  GAT   GSSGQP + SI PVFDFYSGLP KPSPFLQQT+ RFEKYLGEC 
Sbjct: 175 SSATAPSQTPGATIAPGSSGQPINASIMPVFDFYSGLPKKPSPFLQQTILRFEKYLGECH 234

Query: 246 QWIEELEQFLALDSNRSASNSSTSLFHSLPKIMSNVHEFFVHVAAKVESIHQYIDSMKAA 305
           QWIEELEQ L LDS R+AS++ +SL  SLPK+M+NVH+FFVHVAAKVESIHQ+I+SMK++
Sbjct: 235 QWIEELEQLLLLDSERNASSNGSSLLQSLPKVMTNVHDFFVHVAAKVESIHQFIESMKSS 294

Query: 306 YLADQRCRGDGNNPFLEADRRETARQEAAAKRVHPTLHLTANTQPSTQAAGLLASSGSHG 365
           YLADQR RG+ N+PFLEADRRETARQEAA+KRVHPTLHL AN QPSTQ AGL +SSG+  
Sbjct: 295 YLADQRHRGEVNDPFLEADRRETARQEAASKRVHPTLHLPANPQPSTQVAGLFSSSGTQA 354

Query: 366 ASTVQQLSTVATPASSGGGLSLFS 390
           A    Q S   T  SSG G SLFS
Sbjct: 355 ALPAPQTSAATTSLSSGSGFSLFS 377

The following BLAST results are available for this feature:

BLAST of Carg00864 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022949627.1	1.0e-197	98.07	nuclear pore complex protein NUP58 isoform X2 [Cucurbita moschata]	[more]
XP_022949626.1	1.2e-190	98.44	nuclear pore complex protein NUP58 isoform X1 [Cucurbita moschata]	[more]
XP_022979120.1	1.3e-184	91.43	nuclear pore complex protein NUP58-like [Cucurbita maxima]	[more]
XP_023543262.1	6.5e-184	91.09	nuclear pore complex protein NUP58-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022949628.1	5.0e-168	100.00	nuclear pore complex protein NUP58 isoform X3 [Cucurbita moschata]	[more]

BLAST of Carg00864 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G37130.1	2.2e-109	64.83	hydroxyproline-rich glycoprotein family protein	[more]

BLAST of Carg00864 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8RWH9\|NUP58_ARATH	4.0e-108	64.83	Nuclear pore complex protein NUP58 OS=Arabidopsis thaliana OX=3702 GN=NUP58 PE=1...	[more]
sp\|P84752\|PERA_ALOVR	4.4e-06	72.73	Peroxidase A (Fragments) OS=Aloe vera OX=34199 PE=1 SV=1	[more]

BLAST of Carg00864 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B190\|A0A1S3B190_CUCME	1.5e-160	90.33	nuclear pore complex protein NUP58 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
tr\|A0A0A0KI61\|A0A0A0KI61_CUCSA	1.8e-158	88.25	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G490040 PE=4 SV=1	[more]
tr\|A0A1S3B1D2\|A0A1S3B1D2_CUCME	1.1e-139	89.80	nuclear pore complex protein NUP58 isoform X2 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
tr\|A0A2P4KIU2\|A0A2P4KIU2_QUESU	1.5e-131	76.54	Nuclear pore complex protein nup58 OS=Quercus suber OX=58331 GN=CFP56_06822 PE=4...	[more]
tr\|A0A0L9UR63\|A0A0L9UR63_PHAAN	2.0e-128	75.31	Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan06g037300 PE...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005643	nuclear pore

Vocabulary: **Biological Process**
Term	Definition
GO:0006913	nucleocytoplasmic transport

Vocabulary: **INTERPRO**
Term	Definition
IPR024882	Nucleoporin_p58/p45

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006913	nucleocytoplasmic transport
cellular_component	GO:0005643	nuclear pore
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg00864-RA	Carg00864-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 43..63
None	No IPR available	PFAM	PF15967	Nucleoporin_FG2	coord: 225..448 e-value: 9.9E-12 score: 44.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 181..208
IPR024882	Nucleoporin p58/p45	PANTHER	PTHR13437	NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1	coord: 4..458

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg00864	Cla001813	Watermelon (97103) v1	carwmB0407
Carg00864	Csa6G490040	Cucumber (Chinese Long) v2	carcuB0441
Carg00864	MELO3C007529	Melon (DHL92) v3.5.1	carmeB0414
Carg00864	ClCG01G016580	Watermelon (Charleston Gray)	carwcgB0397
Carg00864	CSPI06G27740	Wild cucumber (PI 183967)	carcpiB0446
Carg00864	Cucsa.102130	Cucumber (Gy14) v1	carcgyB0467
Carg00864	CmaCh07G007270	Cucurbita maxima (Rimu)	carcmaB0571
Carg00864	CmaCh03G010010	Cucurbita maxima (Rimu)	carcmaB0567
Carg00864	CmoCh07G007440	Cucurbita moschata (Rifu)	carcmoB0554
Carg00864	CmoCh03G010120	Cucurbita moschata (Rifu)	carcmoB0551
Carg00864	Lsi01G010090	Bottle gourd (USVL1VR-Ls)	carlsiB364
Carg00864	Cp4.1LG10g02740	Cucurbita pepo (Zucchini)	carcpeB0554
Carg00864	Cp4.1LG19g11610	Cucurbita pepo (Zucchini)	carcpeB0563
Carg00864	CsGy6G027230	Cucumber (Gy14) v2	carcgybB0418
Carg00864	MELO3C007529.2	Melon (DHL92) v3.6.1	carmedB0418
Carg00864	CsaV3_6G042900	Cucumber (Chinese Long) v3	carcucB0442
Carg00864	Cla97C01G015590	Watermelon (97103) v2	carwmbB0426
Carg00864	Bhi03G001477	Wax gourd	carwgoB0489

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg00864	Carg05234	Silver-seed gourd	carcarB428

The following block(s) are covering this gene:


Gene	Organism	Block
Carg00864	Melon (DHL92) v3.5.1	carmeB0403
Carg00864	Melon (DHL92) v3.5.1	carmeB0408
Carg00864	Melon (DHL92) v3.6.1	carmedB0412
Carg00864	Watermelon (Charleston Gray)	carwcgB0404
Carg00864	Watermelon (97103) v1	carwmB0401
Carg00864	Watermelon (97103) v2	carwmbB0434
Carg00864	Silver-seed gourd	carcarB218
Carg00864	Silver-seed gourd	carcarB427
Carg00864	Cucumber (Gy14) v2	carcgybB0411
Carg00864	Cucumber (Gy14) v1	carcgyB0470
Carg00864	Cucurbita maxima (Rimu)	carcmaB0569
Carg00864	Cucurbita pepo (Zucchini)	carcpeB0556
Carg00864	Cucurbita pepo (Zucchini)	carcpeB0568
Carg00864	Cucurbita pepo (Zucchini)	carcpeB0570
Carg00864	Wild cucumber (PI 183967)	carcpiB0438
Carg00864	Cucumber (Chinese Long) v2	carcuB0433
Carg00864	Cucumber (Chinese Long) v3	carcucB0435