Carg00749 (gene) Silver-seed gourd

Overview
NameCarg00749
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionCOMPASS-like H3K4 histone methylase component WDR5A
LocationCucurbita_argyrosperma_scaffold_014 : 1272703 .. 1275264 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAAATTAAGCGTGGAGCTGTGAAAGAAGATCGTTCATCGCGTTAGGGCGGTCTGAAAATAGTAGAGATCTGTACTGCTGTCATTGGAGCCGGAGGCCTTGACTCTTCGCCTCCATCTCCGGCTTTCTCCCGTTGGGTTCTTCAATTTCAAAAGCCACATATTAGAACCATTGGAATCTCCTTTTCCAGCGATAGATTGAAGGGATGTCCTCGGAGCCATCTCAATCGGATTCCTATAAACCTTACACTCTGTCCCAAACCCTAACTGGCCACAAGCGGGCGATCTCATCCGTCAAATTCTCAGCGGATGGCCGTCTTCTTGGCTCCTCCTCCGCCGATAAGACCCTTCGCACTTACTCCTGCTCAAATTCTACTCTGACCCCACTTCATGAATTCCAAGGCCATGAACAGGGTGTCTCCGACTTGGCTTTCTCCTCCGATTCTCGTTTTCTTGTGTCCGCCTCTGACGACAAGACTCTTCGCCTTTGGGATGTCTCTACTGGATCCCTTATCAAGACGCTCAATGGCCATACTAACTATGTGTTCTGTGTCAACTTCAATCCCCAATCCAACATGATTGTGTCTGGCTCCTTCGATGAGACCGTCCGCATTTGGGACGTCAAATCTGGCAAGTGTCTTAAAGTCCTTCCGGCCCACTCTGATCCTGTCACTGGCGTGGATTTCAATCGTGATGGCTCGCTGATTGTTTCGAGTAGCTATGATGGGCTGTGCCGAATTTGGGATGCCTCTACCGGGCATTGTGTGAAAACTTTGATTGATGATGAAAACCCACCTGTTTCTTTCGTCAAGTTCTCCCCCAATGGGAAATTTATTCTTGTTGGGACTTTAGATAATACTTTGGTAAGTATCTTCTTACATCCTTTTCTTCCTGATTTAGGCTTATGTATTGTGCTACTTATCGCATATTTTGTGCTTTGTGGATGAGTGGTTGCCGGTTGGTTATTGGGTGTTTTAGGTTCATATGCTCAGATTTCGTATTGAGAGGTCTGGAAATTATTCATCATCTGAATGGCTTTCGATTGGAATTTTTTATTGTTAATTACCTATGCTAAAAATATTACGTATGGAACATTTCATCTAGGTTGAAAGTCTCAGAGTATTTTAAAAAGAATATTCACCAAACATTTACTTCGAAGAGGTTGTGGGTGAACCTTCTATATGAATTTTGCTCTATGACTTAGGTTGAAGGTACTTATGGGCCGCTTCTGCGTTTCTGTTGCTTGATTTTGCTTGATCTATCTGTATATAGTTTGGCGATTTTTCAGAAGTTTTAGTGATTATTAATGTCTAAGGATAAAGTGGAAACTAGGAATATCTATATCAGTATTACATAGATTTAAATATAATCTTGCATCCTGTGGGTGGGGGTTAGAAAAACAACTGATTTACAATTATGTGGCTTCTTTTGAGGTCACTTTAAGTTTTGAACTCTTGATGAAGATAGTTATCATCTTGTCAGAAGTCAAATTTTGAACATCTTGTAAATACAGAACATTTCGTTTCTTTTGGTTTGAATTTATTGTTGTTACTTTTTATTTTAACTCTGAATGTCGGGATCATGCATCTTATATGTTGATGCATAGACGACTAGGCAAGGTTTATGAATGTAAATCCAATTTGATAATTAGAAAAGCTTCTCTTTTGGGCTATAGGATAGCAGGCAAGCCAAACTGCTGATCTTCACACTCCACTATTTCTATTTTTCTATCATTTCGTCAGTATTGATTATTTACATACTATATTTTTTTTTTTTCTGTTTTAAATCACAGAGATTGTGGAACTTCTCTACTGGAAAATTTCTGAAAACTTATACAGGCCATGCTAACTCGAAATTCTGCATCGCCTCCACCTTTTCTGTGACAAATGGAAAGTATATCGTGAGTGGTTCAGAAGACAATTGTGTGTACCTGTGGGAACTGCAGACCAGGGAAATAGTTCAGAAACTAGAAGGTCACTCTGACACAGTTATATCAGTATCTTGTCACCCCAGCGAGAACCTGATTGCTTCTGGAGCACTGGGCAATGATAAAACTGTGAAGATCTGGACCCAGAAGAAAGACTAGTTCATTTGTCATCAAGGCAATCCATGATCAAGGTTTGAACATATAACTCTGTGGTGGTGGCACAATTCTTGTAGCTTAGTTTTATTAAGTAGAAACTGTTAAAAACATAACCTTTTTAAAGTTAAGCATGTAAGTTTTGTTTTTATTCTCCGCGTCTCTGTTGTTGTCACCCTAACGATTGCTATCACAGATTCGGTGATGTTTATGAATGTAGTGTAGTTGGTTTGCTGCACCCAAGAGTTAAGGATTGTAGGTTCTTTTCGTTTATTTTACTTTCACCAGAATGTTGTTCGAATAACAGAGTTTAGGTTGTAAGAATGAATGACAGAAGCTAAGAAATAGGAGGCAAGACTATAATATATATCATAACGAGACTTCAACTCAATCAATAATAGGTGTATTGACTAGTCTGTTTCTGCGTTGCTGGCAGTAGGAACATCAGACTATTGGAAGGTGTATGTTGTAGAAACTACAGTAG

mRNA sequence

CAAAATTAAGCGTGGAGCTGTGAAAGAAGATCGTTCATCGCGTTAGGGCGGTCTGAAAATAGTAGAGATCTGTACTGCTGTCATTGGAGCCGGAGGCCTTGACTCTTCGCCTCCATCTCCGGCTTTCTCCCGTTGGGTTCTTCAATTTCAAAAGCCACATATTAGAACCATTGGAATCTCCTTTTCCAGCGATAGATTGAAGGGATGTCCTCGGAGCCATCTCAATCGGATTCCTATAAACCTTACACTCTGTCCCAAACCCTAACTGGCCACAAGCGGGCGATCTCATCCGTCAAATTCTCAGCGGATGGCCGTCTTCTTGGCTCCTCCTCCGCCGATAAGACCCTTCGCACTTACTCCTGCTCAAATTCTACTCTGACCCCACTTCATGAATTCCAAGGCCATGAACAGGGTGTCTCCGACTTGGCTTTCTCCTCCGATTCTCGTTTTCTTGTGTCCGCCTCTGACGACAAGACTCTTCGCCTTTGGGATGTCTCTACTGGATCCCTTATCAAGACGCTCAATGGCCATACTAACTATGTGTTCTGTGTCAACTTCAATCCCCAATCCAACATGATTGTGTCTGGCTCCTTCGATGAGACCGTCCGCATTTGGGACGTCAAATCTGGCAAGTGTCTTAAAGTCCTTCCGGCCCACTCTGATCCTGTCACTGGCGTGGATTTCAATCGTGATGGCTCGCTGATTGTTTCGAGTAGCTATGATGGGCTGTGCCGAATTTGGGATGCCTCTACCGGGCATTGTGTGAAAACTTTGATTGATGATGAAAACCCACCTGTTTCTTTCGTCAAGTTCTCCCCCAATGGGAAATTTATTCTTGTTGGGACTTTAGATAATACTTTGAGATTGTGGAACTTCTCTACTGGAAAATTTCTGAAAACTTATACAGGCCATGCTAACTCGAAATTCTGCATCGCCTCCACCTTTTCTGTGACAAATGGAAAGTATATCGTGAGTGGTTCAGAAGACAATTGTGTGTACCTGTGGGAACTGCAGACCAGGGAAATAGTTCAGAAACTAGAAGGTCACTCTGACACAGTTATATCAGTATCTTGTCACCCCAGCGAGAACCTGATTGCTTCTGGAGCACTGGGCAATGATAAAACTGTGAAGATCTGGACCCAGAAGAAAGACTAGTTCATTTGTCATCAAGGCAATCCATGATCAAGGTTTGAACATATAACTCTGTGGTGGTGGCACAATTCTTGTAGCTTAGTTTTATTAAGTAGAAACTGTTAAAAACATAACCTTTTTAAAGTTAAGCATGTAAGTTTTGTTTTTATTCTCCGCGTCTCTGTTGTTGTCACCCTAACGATTGCTATCACAGATTCGGTGATGTTTATGAATGTAGTGTAGTTGGTTTGCTGCACCCAAGAGTTAAGGATTGTAGGTTCTTTTCGTTTATTTTACTTTCACCAGAATGTTGTTCGAATAACAGAGTTTAGGTTGTAAGAATGAATGACAGAAGCTAAGAAATAGGAGGCAAGACTATAATATATATCATAACGAGACTTCAACTCAATCAATAATAGGTGTATTGACTAGTCTGTTTCTGCGTTGCTGGCAGTAGGAACATCAGACTATTGGAAGGTGTATGTTGTAGAAACTACAGTAG

Coding sequence (CDS)

ATGTCCTCGGAGCCATCTCAATCGGATTCCTATAAACCTTACACTCTGTCCCAAACCCTAACTGGCCACAAGCGGGCGATCTCATCCGTCAAATTCTCAGCGGATGGCCGTCTTCTTGGCTCCTCCTCCGCCGATAAGACCCTTCGCACTTACTCCTGCTCAAATTCTACTCTGACCCCACTTCATGAATTCCAAGGCCATGAACAGGGTGTCTCCGACTTGGCTTTCTCCTCCGATTCTCGTTTTCTTGTGTCCGCCTCTGACGACAAGACTCTTCGCCTTTGGGATGTCTCTACTGGATCCCTTATCAAGACGCTCAATGGCCATACTAACTATGTGTTCTGTGTCAACTTCAATCCCCAATCCAACATGATTGTGTCTGGCTCCTTCGATGAGACCGTCCGCATTTGGGACGTCAAATCTGGCAAGTGTCTTAAAGTCCTTCCGGCCCACTCTGATCCTGTCACTGGCGTGGATTTCAATCGTGATGGCTCGCTGATTGTTTCGAGTAGCTATGATGGGCTGTGCCGAATTTGGGATGCCTCTACCGGGCATTGTGTGAAAACTTTGATTGATGATGAAAACCCACCTGTTTCTTTCGTCAAGTTCTCCCCCAATGGGAAATTTATTCTTGTTGGGACTTTAGATAATACTTTGAGATTGTGGAACTTCTCTACTGGAAAATTTCTGAAAACTTATACAGGCCATGCTAACTCGAAATTCTGCATCGCCTCCACCTTTTCTGTGACAAATGGAAAGTATATCGTGAGTGGTTCAGAAGACAATTGTGTGTACCTGTGGGAACTGCAGACCAGGGAAATAGTTCAGAAACTAGAAGGTCACTCTGACACAGTTATATCAGTATCTTGTCACCCCAGCGAGAACCTGATTGCTTCTGGAGCACTGGGCAATGATAAAACTGTGAAGATCTGGACCCAGAAGAAAGACTAG

Protein sequence

MSSEPSQSDSYKPYTLSQTLTGHKRAISSVKFSADGRLLGSSSADKTLRTYSCSNSTLTPLHEFQGHEQGVSDLAFSSDSRFLVSASDDKTLRLWDVSTGSLIKTLNGHTNYVFCVNFNPQSNMIVSGSFDETVRIWDVKSGKCLKVLPAHSDPVTGVDFNRDGSLIVSSSYDGLCRIWDASTGHCVKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNFSTGKFLKTYTGHANSKFCIASTFSVTNGKYIVSGSEDNCVYLWELQTREIVQKLEGHSDTVISVSCHPSENLIASGALGNDKTVKIWTQKKD
Homology
[Close]
BLAST of Carg00749 vs. NCBI nr
Match: XP_022950714.1 (COMPASS-like H3K4 histone methylase component WDR5A [Cucurbita moschata] >XP_022977220.1 COMPASS-like H3K4 histone methylase component WDR5A [Cucurbita maxima] >XP_023544202.1 COMPASS-like H3K4 histone methylase component WDR5A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 138.3 bits (347), Expect = 4.6e-29
Identity = 316/316 (100.00%), Postives = 316/316 (100.00%), Query Frame = 0 

Query: 1   MSSEPSQSDSYKPYTLSQTLTGHKRAISSVKFSADGRLLGSSSADKTLRTYSCSNSTLTP 60
           MSSEPSQSDSYKPYTLSQTLTGHKRAISSVKFSADGRLLGSSSADKTLRTYSCSNSTLTP
Sbjct: 1   MSSEPSQSDSYKPYTLSQTLTGHKRAISSVKFSADGRLLGSSSADKTLRTYSCSNSTLTP 60

Query: 61  LXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIKTLXXXXXXXXXXXXXX 120
           LXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIKTLXXXXXXXXXXXXXX
Sbjct: 61  LXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIKTLXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXIDDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSK 240
           XXXXXXXXXXIDDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSK
Sbjct: 181 XXXXXXXXXXIDDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSK 240

Query: 241 FCIASTFSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSCHPSENLIASG 300
           FCIASTFSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSCHPSENLIASG
Sbjct: 241 FCIASTFSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSCHPSENLIASG 300

Query: 301 ALGNDKTVKIWTQKKD 317
           ALGNDKTVKIWTQKKD
Sbjct: 301 ALGNDKTVKIWTQKKD 316

[Close]
BLAST of Carg00749 vs. NCBI nr
Match: XP_022133170.1 (COMPASS-like H3K4 histone methylase component WDR5A [Momordica charantia])

HSP 1 Score: 114.0 bits (284), Expect = 9.3e-22
Identity = 304/318 (95.60%), Postives = 308/318 (96.86%), Query Frame = 0 

Query: 1   MSSEPSQSDSYKPYTLSQTLTGHKRAISSVKFSADGRLLGSSSADKTLRTYSCSNSTLTP 60
           MSSEP QS+ YKPYTLSQTLTGHKRAISSVKFSADGRLLGSSSADKTLRTY+CSNSTLT 
Sbjct: 1   MSSEPPQSEPYKPYTLSQTLTGHKRAISSVKFSADGRLLGSSSADKTLRTYACSNSTLTX 60

Query: 61  LXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIKTLXXXXXXXXXXXXXX 120
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIKT XXXXXXXXXXXXXX
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIKTXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXIDDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSK 240
           XXXXXXXXXXIDDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX NSK
Sbjct: 181 XXXXXXXXXXIDDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANSK 240

Query: 241 FCIASTFSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSCHPSENLIASG 300
           FCI+STFSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  CHPSEN+IASG
Sbjct: 241 FCISSTFSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCHPSENMIASG 300

Query: 301 ALGNDKTVKIWT--QKKD 317
           ALGNDKTVKIWT  QKKD
Sbjct: 301 ALGNDKTVKIWTQNQKKD 318

[Close]
BLAST of Carg00749 vs. NCBI nr
Match: XP_008440490.1 (PREDICTED: COMPASS-like H3K4 histone methylase component WDR5A [Cucumis melo])

HSP 1 Score: 107.8 bits (268), Expect = 6.7e-20
Identity = 300/314 (95.54%), Postives = 304/314 (96.82%), Query Frame = 0 

Query: 1   MSSEPSQSDSYKPYTLSQTLTGHKRAISSVKFSADGRLLGSSSADKTLRTYSCSNSTLTP 60
           M SEPSQ+DSYKPYTLSQTLT HKR ISSVKFSADGRLLGSSSADKTLRTYSCSNST+  
Sbjct: 1   MLSEPSQTDSYKPYTLSQTLTSHKRCISSVKFSADGRLLGSSSADKTLRTYSCSNSTVXX 60

Query: 61  LXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIKTLXXXXXXXXXXXXXX 120
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    XXXXXXXXXXXXXX
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXIDDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSK 240
           XXXXXXXXXXIDDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSK
Sbjct: 181 XXXXXXXXXXIDDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSK 240

Query: 241 FCIASTFSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSCHPSENLIASG 300
           FCIASTFSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSCHPSEN+IASG
Sbjct: 241 FCIASTFSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSCHPSENMIASG 300

Query: 301 ALGNDKTVKIWTQK 315
           A+GNDKTVKIWTQK
Sbjct: 301 AVGNDKTVKIWTQK 314

[Close]
BLAST of Carg00749 vs. NCBI nr
Match: XP_004143426.1 (PREDICTED: COMPASS-like H3K4 histone methylase component WDR5A [Cucumis sativus] >KGN48663.1 hypothetical protein Csa_6G497140 [Cucumis sativus])

HSP 1 Score: 103.6 bits (257), Expect = 1.3e-18
Identity = 53/58 (91.38%), Postives = 55/58 (94.83%), Query Frame = 0 

Query: 1  MSSEPSQSDSYKPYTLSQTLTGHKRAISSVKFSADGRLLGSSSADKTLRTYSCSNSTL 59
          M SEPSQ+DSYKPYTLSQTLT HKR ISSVKFSADGRLLGSSSADKTLRTYSCSNST+
Sbjct: 1  MLSEPSQTDSYKPYTLSQTLTSHKRCISSVKFSADGRLLGSSSADKTLRTYSCSNSTV 58

[Close]
BLAST of Carg00749 vs. NCBI nr
Match: XP_012079498.1 (COMPASS-like H3K4 histone methylase component WDR5A [Jatropha curcas] >KDP32146.1 hypothetical protein JCGZ_12607 [Jatropha curcas])

HSP 1 Score: 87.8 bits (216), Expect = 7.1e-14
Identity = 280/313 (89.46%), Postives = 294/313 (93.93%), Query Frame = 0 

Query: 9   DSYKPYTLSQTLTGHKRAISSVKFSADGRLLGSSSADKTLRTYSCS-----NSTLTPLXX 68
           DS+KPY L+QTLTGHKRAIS+VKFS+DGR L SSSADKTLRTYS S      S LTPL  
Sbjct: 8   DSFKPYHLTQTLTGHKRAISAVKFSSDGRFLASSSADKTLRTYSLSPSNPPTSPLTPLHE 67

Query: 69  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIKTLXXXXXXXXXXXXXXXXX 128
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    IKTLXXXXXXXXXXXXXXXXX
Sbjct: 68  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGSQIKTLXXXXXXXXXXXXXXXXX 127

Query: 129 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 188
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 128 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 187

Query: 189 XXXXXXXIDDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSKFCI 248
           XXXXXXXIDDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX NSK+CI
Sbjct: 188 XXXXXXXIDDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNSKYCI 247

Query: 249 ASTFSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSCHPSENLIASGALG 308
           +STFS+XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX V+CHPS+N+IASGALG
Sbjct: 248 SSTFSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVACHPSQNMIASGALG 307

Query: 309 NDKTVKIWTQKKD 317
           NDKTV+IWTQ+++
Sbjct: 308 NDKTVRIWTQERE 320

[Close]
BLAST of Carg00749 vs. TAIR10
Match: AT3G49660.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 65.5 bits (158), Expect = 6.9e-11
Identity = 33/52 (63.46%), Postives = 41/52 (78.85%), Query Frame = 0 

Query: 1  MSSEPSQSDSYKPYTLSQTLTGHKRAISSVKFSADGRLLGSSSADKTLRTYS 53
          M+ E   + S+ PY  SQTLT H RA+SSVKFS+DGRLL S+SADKT+RTY+
Sbjct: 1  MAEEIPATASFTPYVHSQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYT 52

[Close]
BLAST of Carg00749 vs. TAIR10
Match: AT4G02730.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 51.6 bits (122), Expect = 1.0e-06
Identity = 27/48 (56.25%), Postives = 33/48 (68.75%), Query Frame = 0 

Query: 11 YKPYTLSQTLTGHKRAISSVKFSADGRLLGSSSADKTLRTYSCSNSTL 59
          YKPY   +TL GH  AIS VKFS DG LL S+S DKT+  +S +N +L
Sbjct: 30 YKPYRHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSL 77

[Close]
BLAST of Carg00749 vs. Swiss-Prot
Match: sp|Q9M2Z2|WDR5A_ARATH (COMPASS-like H3K4 histone methylase component WDR5A OS=Arabidopsis thaliana OX=3702 GN=WDR5A PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.2e-09
Identity = 33/52 (63.46%), Postives = 41/52 (78.85%), Query Frame = 0 

Query: 1  MSSEPSQSDSYKPYTLSQTLTGHKRAISSVKFSADGRLLGSSSADKTLRTYS 53
          M+ E   + S+ PY  SQTLT H RA+SSVKFS+DGRLL S+SADKT+RTY+
Sbjct: 1  MAEEIPATASFTPYVHSQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYT 52

[Close]
BLAST of Carg00749 vs. Swiss-Prot
Match: sp|Q9SY00|WDR5B_ARATH (COMPASS-like H3K4 histone methylase component WDR5B OS=Arabidopsis thaliana OX=3702 GN=WDR5B PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.9e-05
Identity = 27/48 (56.25%), Postives = 33/48 (68.75%), Query Frame = 0 

Query: 11 YKPYTLSQTLTGHKRAISSVKFSADGRLLGSSSADKTLRTYSCSNSTL 59
          YKPY   +TL GH  AIS VKFS DG LL S+S DKT+  +S +N +L
Sbjct: 30 YKPYRHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSL 77

[Close]
BLAST of Carg00749 vs. Swiss-Prot
Match: sp|Q54KL5|WDR5_DICDI (WD repeat-containing protein 5 homolog OS=Dictyostelium discoideum OX=44689 GN=wdr5 PE=3 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 7.8e-04
Identity = 22/38 (57.89%), Postives = 29/38 (76.32%), Query Frame = 0 

Query: 14 YTLSQTLTGHKRAISSVKFSADGRLLGSSSADKTLRTY 52
          Y L  TL GH ++ISSVKFS DG+ L S+SADKT++ +
Sbjct: 36 YILKYTLKGHLKSISSVKFSPDGKWLASASADKTIKIW 73

[Close]
BLAST of Carg00749 vs. TrEMBL
Match: tr|A0A1S3B1Z0|A0A1S3B1Z0_CUCME (COMPASS-like H3K4 histone methylase component WDR5A OS=Cucumis melo OX=3656 GN=LOC103484903 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 4.4e-20
Identity = 300/314 (95.54%), Postives = 304/314 (96.82%), Query Frame = 0 

Query: 1   MSSEPSQSDSYKPYTLSQTLTGHKRAISSVKFSADGRLLGSSSADKTLRTYSCSNSTLTP 60
           M SEPSQ+DSYKPYTLSQTLT HKR ISSVKFSADGRLLGSSSADKTLRTYSCSNST+  
Sbjct: 1   MLSEPSQTDSYKPYTLSQTLTSHKRCISSVKFSADGRLLGSSSADKTLRTYSCSNSTVXX 60

Query: 61  LXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIKTLXXXXXXXXXXXXXX 120
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    XXXXXXXXXXXXXX
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXIDDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSK 240
           XXXXXXXXXXIDDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSK
Sbjct: 181 XXXXXXXXXXIDDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSK 240

Query: 241 FCIASTFSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSCHPSENLIASG 300
           FCIASTFSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSCHPSEN+IASG
Sbjct: 241 FCIASTFSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSCHPSENMIASG 300

Query: 301 ALGNDKTVKIWTQK 315
           A+GNDKTVKIWTQK
Sbjct: 301 AVGNDKTVKIWTQK 314

[Close]
BLAST of Carg00749 vs. TrEMBL
Match: tr|A0A0A0KGK9|A0A0A0KGK9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G497140 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 8.3e-19
Identity = 53/58 (91.38%), Postives = 55/58 (94.83%), Query Frame = 0 

Query: 1  MSSEPSQSDSYKPYTLSQTLTGHKRAISSVKFSADGRLLGSSSADKTLRTYSCSNSTL 59
          M SEPSQ+DSYKPYTLSQTLT HKR ISSVKFSADGRLLGSSSADKTLRTYSCSNST+
Sbjct: 1  MLSEPSQTDSYKPYTLSQTLTSHKRCISSVKFSADGRLLGSSSADKTLRTYSCSNSTV 58

[Close]
BLAST of Carg00749 vs. TrEMBL
Match: tr|A0A067K7C9|A0A067K7C9_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_12607 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 4.7e-14
Identity = 280/313 (89.46%), Postives = 294/313 (93.93%), Query Frame = 0 

Query: 9   DSYKPYTLSQTLTGHKRAISSVKFSADGRLLGSSSADKTLRTYSCS-----NSTLTPLXX 68
           DS+KPY L+QTLTGHKRAIS+VKFS+DGR L SSSADKTLRTYS S      S LTPL  
Sbjct: 8   DSFKPYHLTQTLTGHKRAISAVKFSSDGRFLASSSADKTLRTYSLSPSNPPTSPLTPLHE 67

Query: 69  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIKTLXXXXXXXXXXXXXXXXX 128
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    IKTLXXXXXXXXXXXXXXXXX
Sbjct: 68  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGSQIKTLXXXXXXXXXXXXXXXXX 127

Query: 129 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 188
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 128 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 187

Query: 189 XXXXXXXIDDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSKFCI 248
           XXXXXXXIDDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX NSK+CI
Sbjct: 188 XXXXXXXIDDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNSKYCI 247

Query: 249 ASTFSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSCHPSENLIASGALG 308
           +STFS+XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX V+CHPS+N+IASGALG
Sbjct: 248 SSTFSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVACHPSQNMIASGALG 307

Query: 309 NDKTVKIWTQKKD 317
           NDKTV+IWTQ+++
Sbjct: 308 NDKTVRIWTQERE 320

[Close]
BLAST of Carg00749 vs. TrEMBL
Match: tr|A0A1S3UN45|A0A1S3UN45_VIGRR (COMPASS-like H3K4 histone methylase component WDR5A OS=Vigna radiata var. radiata OX=3916 GN=LOC106767058 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 3.1e-13
Identity = 46/59 (77.97%), Postives = 52/59 (88.14%), Query Frame = 0 

Query: 1  MSSEP---SQSDSYKPYTLSQTLTGHKRAISSVKFSADGRLLGSSSADKTLRTYSCSNS 57
          MS+EP   S SDS+KPYTLSQTLTGHKRAIS+VKFS++GRLL SSSADKTLRTY  +NS
Sbjct: 1  MSTEPKPSSDSDSFKPYTLSQTLTGHKRAISAVKFSSNGRLLASSSADKTLRTYGFTNS 59

[Close]
BLAST of Carg00749 vs. TrEMBL
Match: tr|A0A0S3R9A4|A0A0S3R9A4_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.01G524100 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 3.1e-13
Identity = 46/59 (77.97%), Postives = 52/59 (88.14%), Query Frame = 0 

Query: 1  MSSEP---SQSDSYKPYTLSQTLTGHKRAISSVKFSADGRLLGSSSADKTLRTYSCSNS 57
          MS+EP   S SDS+KPYTLSQTLTGHKRAIS+VKFS++GRLL SSSADKTLRTY  +NS
Sbjct: 1  MSTEPKSSSDSDSFKPYTLSQTLTGHKRAISAVKFSSNGRLLASSSADKTLRTYGFTNS 59

The following BLAST results are available for this feature:
BLAST of Carg00749 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022950714.14.6e-29100.00COMPASS-like H3K4 histone methylase component WDR5A [Cucurbita moschata] >XP_022... [more]
XP_022133170.19.3e-2295.60COMPASS-like H3K4 histone methylase component WDR5A [Momordica charantia][more]
XP_008440490.16.7e-2095.54PREDICTED: COMPASS-like H3K4 histone methylase component WDR5A [Cucumis melo][more]
XP_004143426.11.3e-1891.38PREDICTED: COMPASS-like H3K4 histone methylase component WDR5A [Cucumis sativus]... [more]
XP_012079498.17.1e-1489.46COMPASS-like H3K4 histone methylase component WDR5A [Jatropha curcas] >KDP32146.... [more]
BLAST of Carg00749 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G49660.16.9e-1163.46Transducin/WD40 repeat-like superfamily protein[more]
AT4G02730.11.0e-0656.25Transducin/WD40 repeat-like superfamily protein[more]
BLAST of Carg00749 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9M2Z2|WDR5A_ARATH1.2e-0963.46COMPASS-like H3K4 histone methylase component WDR5A OS=Arabidopsis thaliana OX=3... [more]
sp|Q9SY00|WDR5B_ARATH1.9e-0556.25COMPASS-like H3K4 histone methylase component WDR5B OS=Arabidopsis thaliana OX=3... [more]
sp|Q54KL5|WDR5_DICDI7.8e-0457.89WD repeat-containing protein 5 homolog OS=Dictyostelium discoideum OX=44689 GN=w... [more]
BLAST of Carg00749 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3B1Z0|A0A1S3B1Z0_CUCME4.4e-2095.54COMPASS-like H3K4 histone methylase component WDR5A OS=Cucumis melo OX=3656 GN=L... [more]
tr|A0A0A0KGK9|A0A0A0KGK9_CUCSA8.3e-1991.38Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G497140 PE=4 SV=1[more]
tr|A0A067K7C9|A0A067K7C9_JATCU4.7e-1489.46Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_12607 PE=4 SV=1[more]
tr|A0A1S3UN45|A0A1S3UN45_VIGRR3.1e-1377.97COMPASS-like H3K4 histone methylase component WDR5A OS=Vigna radiata var. radiat... [more]
tr|A0A0S3R9A4|A0A0S3R9A4_PHAAN3.1e-1377.97Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.01G... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR017986WD40_repeat_dom
IPR019775WD40_repeat_CS
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR001680WD40_repeat
IPR020472G-protein_beta_WD-40_rep
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg00749-RACarg00749-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 125..139
score: 42.73
coord: 255..269
score: 34.51
coord: 83..97
score: 44.15
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 57..96
e-value: 3.0E-12
score: 56.7
coord: 141..180
e-value: 3.3E-12
score: 56.6
coord: 183..223
e-value: 2.8E-6
score: 36.9
coord: 13..52
e-value: 7.3E-7
score: 38.8
coord: 99..138
e-value: 3.1E-12
score: 56.7
coord: 271..312
e-value: 2.5E-5
score: 33.7
coord: 226..268
e-value: 6.2E-4
score: 29.1
IPR001680WD40 repeatPFAMPF00400WD40coord: 274..311
e-value: 7.9E-6
score: 26.4
coord: 185..223
e-value: 4.3E-5
score: 24.1
coord: 59..96
e-value: 1.2E-10
score: 41.6
coord: 101..138
e-value: 9.2E-9
score: 35.7
coord: 227..267
e-value: 1.7E-4
score: 22.2
coord: 142..180
e-value: 5.3E-10
score: 39.6
coord: 17..49
e-value: 2.8E-4
score: 21.5
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 106..147
score: 18.963
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 64..105
score: 18.696
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 148..189
score: 15.956
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 191..232
score: 13.783
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 20..52
score: 11.277
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 233..277
score: 10.542
NoneNo IPR availablePIRSFPIRSF002394GNBP_Bcoord: 1..314
e-value: 5.4E-80
score: 266.7
NoneNo IPR availablePANTHERPTHR22847WD40 REPEAT PROTEINcoord: 6..314
NoneNo IPR availablePANTHERPTHR22847:SF602COMPASS-LIKE H3K4 HISTONE METHYLASE COMPONENT WDR5Bcoord: 6..314
NoneNo IPR availableCDDcd00200WD40coord: 16..311
e-value: 2.97743E-95
score: 285.768
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3DG3DSA:2.130.10.10coord: 2..315
e-value: 6.3E-133
score: 444.4
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 125..139
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 83..97
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 167..181
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 255..269
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 20..316
score: 72.107
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILYSSF50978WD40 repeat-likecoord: 11..311

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg00749Cla014075Watermelon (97103) v1carwmB0407
Carg00749Csa6G497140Cucumber (Chinese Long) v2carcuB0441
Carg00749MELO3C007681Melon (DHL92) v3.5.1carmeB0414
Carg00749ClCG01G018070Watermelon (Charleston Gray)carwcgB0397
Carg00749CSPI06G29380Wild cucumber (PI 183967)carcpiB0446
Carg00749Cucsa.103640Cucumber (Gy14) v1carcgyB0467
Carg00749CmaCh03G008660Cucurbita maxima (Rimu)carcmaB0567
Carg00749CmoCh03G009060Cucurbita moschata (Rifu)carcmoB0551
Carg00749Cp4.1LG19g10260Cucurbita pepo (Zucchini)carcpeB0563
Carg00749Cp4.1LG02g03690Cucurbita pepo (Zucchini)carcpeB0565
Carg00749Cp4.1LG10g01660Cucurbita pepo (Zucchini)carcpeB0554
Carg00749CsGy6G028950Cucumber (Gy14) v2carcgybB0418
Carg00749CsaV3_6G044600Cucumber (Chinese Long) v3carcucB0442
Carg00749Cla97C01G017310Watermelon (97103) v2carwmbB0426
Carg00749Bhi03G000847Wax gourdcarwgoB0491
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg00749Silver-seed gourdcarcarB064
Carg00749Silver-seed gourdcarcarB001
Carg00749Silver-seed gourdcarcarB401
Carg00749Silver-seed gourdcarcarB424
Carg00749Cucumber (Gy14) v2carcgybB0410
Carg00749Cucumber (Gy14) v1carcgyB0469
Carg00749Cucurbita maxima (Rimu)carcmaB0556
Carg00749Cucurbita maxima (Rimu)carcmaB0568
Carg00749Cucurbita maxima (Rimu)carcmaB0571
Carg00749Cucurbita moschata (Rifu)carcmoB0540
Carg00749Cucurbita moschata (Rifu)carcmoB0544
Carg00749Cucurbita moschata (Rifu)carcmoB0552
Carg00749Cucurbita moschata (Rifu)carcmoB0554
Carg00749Cucurbita pepo (Zucchini)carcpeB0555
Carg00749Cucurbita pepo (Zucchini)carcpeB0571
Carg00749Wild cucumber (PI 183967)carcpiB0437
Carg00749Cucumber (Chinese Long) v2carcuB0432
Carg00749Cucumber (Chinese Long) v3carcucB0434
Carg00749Bottle gourd (USVL1VR-Ls)carlsiB364
Carg00749Bottle gourd (USVL1VR-Ls)carlsiB366
Carg00749Bottle gourd (USVL1VR-Ls)carlsiB370
Carg00749Melon (DHL92) v3.5.1carmeB0407
Carg00749Melon (DHL92) v3.6.1carmedB0411
Carg00749Melon (DHL92) v3.6.1carmedB0418
Carg00749Watermelon (Charleston Gray)carwcgB0396
Carg00749Watermelon (Charleston Gray)carwcgB0402
Carg00749Watermelon (97103) v1carwmB0399
Carg00749Watermelon (97103) v1carwmB0408
Carg00749Watermelon (97103) v2carwmbB0431