Carg00653 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg00653
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Anti-muellerian hormone type-2 receptor
Location	Cucurbita_argyrosperma_scaffold_014 : 801262 .. 801744 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTACTGTCATCATCCTCTTTAGTTCGAGCATTGCCGGTTAATCGTTTGAATTCGTTTTGTAAACCGGCGAATCCACGGACGGCAGTGAAGATTCAGGCCATGGCAAAGGAAGGAAGCGAGAGCGAAGGGGGCATTGCAGAGACGTTGGCAATAGCCGGGGGGTTAGTGGCGACCCCAGTGATCGGTTGGTCGCTGTACACCCTGAAAACAACCGGGTGCGGGCTGCCGCCGGGGCCAGGCGGGTCACTCGGCGCATTGGAAGGCGTCAGCTACTTGGCGGTGGTGGGCATCGTGGGTTGGTCGGCATACACGAAGACGAAAACTGGATCTGGCCTGCCCAACGGCCCTTTTGGGCTATTGGGCGCGGTGGAAGGTCTGTCGTACTTGAGTTTATTGGCTATCTTGGTCGTTTTTGGGTTGCAATACTTCGAACAGGGGTACATCCCCGGCCCTCTTCCGGCTGATCAGTGCTTTGGTTGA

mRNA sequence

ATGCTACTGTCATCATCCTCTTTAGTTCGAGCATTGCCGGTTAATCGTTTGAATTCGTTTTGTAAACCGGCGAATCCACGGACGGCAGTGAAGATTCAGGCCATGGCAAAGGAAGGAAGCGAGAGCGAAGGGGGCATTGCAGAGACGTTGGCAATAGCCGGGGGGTTAGTGGCGACCCCAGTGATCGGTTGGTCGCTGTACACCCTGAAAACAACCGGGTGCGGGCTGCCGCCGGGGCCAGGCGGGTCACTCGGCGCATTGGAAGGCGTCAGCTACTTGGCGGTGGTGGGCATCGTGGGTTGGTCGGCATACACGAAGACGAAAACTGGATCTGGCCTGCCCAACGGCCCTTTTGGGCTATTGGGCGCGGTGGAAGGTCTGTCGTACTTGAGTTTATTGGCTATCTTGGTCGTTTTTGGGTTGCAATACTTCGAACAGGGGTACATCCCCGGCCCTCTTCCGGCTGATCAGTGCTTTGGTTGA

Coding sequence (CDS)

ATGCTACTGTCATCATCCTCTTTAGTTCGAGCATTGCCGGTTAATCGTTTGAATTCGTTTTGTAAACCGGCGAATCCACGGACGGCAGTGAAGATTCAGGCCATGGCAAAGGAAGGAAGCGAGAGCGAAGGGGGCATTGCAGAGACGTTGGCAATAGCCGGGGGGTTAGTGGCGACCCCAGTGATCGGTTGGTCGCTGTACACCCTGAAAACAACCGGGTGCGGGCTGCCGCCGGGGCCAGGCGGGTCACTCGGCGCATTGGAAGGCGTCAGCTACTTGGCGGTGGTGGGCATCGTGGGTTGGTCGGCATACACGAAGACGAAAACTGGATCTGGCCTGCCCAACGGCCCTTTTGGGCTATTGGGCGCGGTGGAAGGTCTGTCGTACTTGAGTTTATTGGCTATCTTGGTCGTTTTTGGGTTGCAATACTTCGAACAGGGGTACATCCCCGGCCCTCTTCCGGCTGATCAGTGCTTTGGTTGA

Protein sequence

MLLSSSSLVRALPVNRLNSFCKPANPRTAVKIQAMAKEGSESEGGIAETLAIAGGLVATPVIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSAYTKTKTGSGLPNGPFGLLGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG

Homology

[Close]

BLAST of Carg00653 vs. NCBI nr
Match: XP_022950150.1 (uncharacterized protein LOC111453326 [Cucurbita moschata] >XP_023544302.1 uncharacterized protein LOC111803919 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 199.5 bits (506), Expect = 8.5e-48
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 1   MLLSSSSLVRALPVNRLNSFCKPANPRTAVKIQAMAKEGSESEGGIAETLAIAGGLVATP 60
           MLLSSSSLVRALPVNRLNSFCKPANPRTAVKIQAMAKEGSESEGGIAETLAIAGGLVATP
Sbjct: 1   MLLSSSSLVRALPVNRLNSFCKPANPRTAVKIQAMAKEGSESEGGIAETLAIAGGLVATP 60

Query: 61  VIGWSLYTLKTTGCGLPPGPGGSLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           VIGWSLYTLKTTGCGLPPGPGGSLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  VIGWSLYTLKTTGCGLPPGPGGSLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXVVFGLQYFEQGYIPGPLPADQCFG 161
           XXXXXXXXXXXXXXXXVVFGLQYFEQGYIPGPLPADQCFG
Sbjct: 121 XXXXXXXXXXXXXXXXVVFGLQYFEQGYIPGPLPADQCFG 160

[Close]

BLAST of Carg00653 vs. NCBI nr
Match: XP_022978571.1 (uncharacterized protein LOC111478511 [Cucurbita maxima])

HSP 1 Score: 196.4 bits (498), Expect = 7.2e-47
Identity = 158/160 (98.75%), Postives = 158/160 (98.75%), Query Frame = 0


Query: 1   MLLSSSSLVRALPVNRLNSFCKPANPRTAVKIQAMAKEGSESEGGIAETLAIAGGLVATP 60
           MLLSSSSLVRALPVNRLNSFCKPANPRTAVKIQAMAKEGSESEGGIAETLAIAGGLVATP
Sbjct: 1   MLLSSSSLVRALPVNRLNSFCKPANPRTAVKIQAMAKEGSESEGGIAETLAIAGGLVATP 60

Query: 61  VIGWSLYTLKTTGCGLPPGPGGSLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           VIGWSLYTLKTTGCGLPPGPGGSLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  VIGWSLYTLKTTGCGLPPGPGGSLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXVVFGLQYFEQGYIPGPLPADQCFG 161
           XXXXXXXXXXXXXXX VVFGLQYFEQGYIPGPLPA QCFG
Sbjct: 121 XXXXXXXXXXXXXXXLVVFGLQYFEQGYIPGPLPAAQCFG 160

[Close]

BLAST of Carg00653 vs. NCBI nr
Match: XP_008440700.1 (PREDICTED: uncharacterized protein LOC103485040 [Cucumis melo])

HSP 1 Score: 184.1 bits (466), Expect = 3.7e-43
Identity = 144/160 (90.00%), Postives = 148/160 (92.50%), Query Frame = 0


Query: 1   MLLSSSSLVRALPVNRLNSFCKPANPRTAVKIQAMAKEGSESEGGIAETLAIAGGLVATP 60
           MLLSSSSL+R+LPV R N  CKPANPRT VK+QAMAKEGSESEGGIAET+AIAGGLVATP
Sbjct: 1   MLLSSSSLLRSLPVTRQNLACKPANPRTGVKVQAMAKEGSESEGGIAETVAIAGGLVATP 60

Query: 61  VIGWSLYTLKTTGCGLPPGPGGSLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           VIGWSLYTLKTTGCGLPPGPGGSLG      XXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXVVFGLQYFEQGYIPGPLPADQCFG 161
           XXXXXXXXXXXXXXX VVFGLQYFEQGYIPGPLPADQCFG
Sbjct: 121 XXXXXXXXXXXXXXXLVVFGLQYFEQGYIPGPLPADQCFG 160

[Close]

BLAST of Carg00653 vs. NCBI nr
Match: XP_004143505.1 (PREDICTED: uncharacterized protein LOC101218070 [Cucumis sativus] >KGN48822.1 hypothetical protein Csa_6G502600 [Cucumis sativus])

HSP 1 Score: 181.0 bits (458), Expect = 3.1e-42
Identity = 142/160 (88.75%), Postives = 148/160 (92.50%), Query Frame = 0


Query: 1   MLLSSSSLVRALPVNRLNSFCKPANPRTAVKIQAMAKEGSESEGGIAETLAIAGGLVATP 60
           MLLSSSSL+++LPVNR N  CKPANPRT VK+QAMAKEGSESEGGIAET+AIAGGLVATP
Sbjct: 1   MLLSSSSLLQSLPVNRPNLACKPANPRTGVKVQAMAKEGSESEGGIAETVAIAGGLVATP 60

Query: 61  VIGWSLYTLKTTGCGLPPGPGGSLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           VIGWSLYTLKTTGCGLPPGPGGSLG      XXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXVVFGLQYFEQGYIPGPLPADQCFG 161
           XXXXXXXXXXXXXXX VVFGLQY +QGYIPGPLPADQCFG
Sbjct: 121 XXXXXXXXXXXXXXXLVVFGLQYLDQGYIPGPLPADQCFG 160

[Close]

BLAST of Carg00653 vs. NCBI nr
Match: XP_018829482.1 (PREDICTED: uncharacterized protein LOC108997585 [Juglans regia])

HSP 1 Score: 124.4 bits (311), Expect = 3.5e-25
Identity = 118/158 (74.68%), Postives = 127/158 (80.38%), Query Frame = 0


Query: 4   SSSSLVRALPVNRLNSFCKPANPRTAVKIQAMAKEGSESEG-GIAETLAIAGGLVATPVI 63
           +S+SL         NS  + A   T +K+  MAKE SES G G+ E  AIAGGLV+TPVI
Sbjct: 13  ASNSLSSPRSNGPFNSTHERARSYTPLKLLGMAKESSESSGNGVVEKAAIAGGLVSTPVI 72

Query: 64  GWSLYTLKTTGCGLPPGPGGSLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 123
           GWSLYTLKTTGCGLPPGPGGS+G       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 73  GWSLYTLKTTGCGLPPGPGGSIGALEGVSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 132

Query: 124 XXXXXXXXXXXXXXVVFGLQYFEQGYIPGPLPADQCFG 161
           XXXXXXXXXXXXXXVVFGLQYFEQGYIPGPLPAD+CFG
Sbjct: 133 XXXXXXXXXXXXXXVVFGLQYFEQGYIPGPLPADKCFG 170

[Close]

BLAST of Carg00653 vs. TAIR10
Match: AT3G50685.1 (unknown protein)

HSP 1 Score: 97.1 bits (240), Expect = 1.1e-20
Identity = 97/130 (74.62%), Postives = 110/130 (84.62%), Query Frame = 0


Query: 31  KIQAMAKEGSESEGGIAETLAIAGGLVATPVIGWSLYTLKTTGCGLPPGPGGSLGXXXXX 90
           ++ A AK+ +++ GG  ET AIAG LV+TPVIGWSLYTLKTTGCGLPPGP G +G     
Sbjct: 30  RVVAKAKDNTDT-GGFLETAAIAGSLVSTPVIGWSLYTLKTTGCGLPPGPAGLIGALEGV 89

Query: 91  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVFGLQYFEQGYIP 150
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VVFG+Q+ + G +P
Sbjct: 90  SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVVFGIQFLDNGSVP 149

Query: 151 GPLPADQCFG 161
           GPLP+DQCFG
Sbjct: 150 GPLPSDQCFG 158

[Close]

BLAST of Carg00653 vs. TrEMBL
Match: tr|A0A1S3B1A0|A0A1S3B1A0_CUCME (uncharacterized protein LOC103485040 OS=Cucumis melo OX=3656 GN=LOC103485040 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 2.4e-43
Identity = 144/160 (90.00%), Postives = 148/160 (92.50%), Query Frame = 0


Query: 1   MLLSSSSLVRALPVNRLNSFCKPANPRTAVKIQAMAKEGSESEGGIAETLAIAGGLVATP 60
           MLLSSSSL+R+LPV R N  CKPANPRT VK+QAMAKEGSESEGGIAET+AIAGGLVATP
Sbjct: 1   MLLSSSSLLRSLPVTRQNLACKPANPRTGVKVQAMAKEGSESEGGIAETVAIAGGLVATP 60

Query: 61  VIGWSLYTLKTTGCGLPPGPGGSLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           VIGWSLYTLKTTGCGLPPGPGGSLG      XXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXVVFGLQYFEQGYIPGPLPADQCFG 161
           XXXXXXXXXXXXXXX VVFGLQYFEQGYIPGPLPADQCFG
Sbjct: 121 XXXXXXXXXXXXXXXLVVFGLQYFEQGYIPGPLPADQCFG 160

[Close]

BLAST of Carg00653 vs. TrEMBL
Match: tr|A0A0A0KKC0|A0A0A0KKC0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G502600 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.1e-42
Identity = 142/160 (88.75%), Postives = 148/160 (92.50%), Query Frame = 0


Query: 1   MLLSSSSLVRALPVNRLNSFCKPANPRTAVKIQAMAKEGSESEGGIAETLAIAGGLVATP 60
           MLLSSSSL+++LPVNR N  CKPANPRT VK+QAMAKEGSESEGGIAET+AIAGGLVATP
Sbjct: 1   MLLSSSSLLQSLPVNRPNLACKPANPRTGVKVQAMAKEGSESEGGIAETVAIAGGLVATP 60

Query: 61  VIGWSLYTLKTTGCGLPPGPGGSLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           VIGWSLYTLKTTGCGLPPGPGGSLG      XXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXVVFGLQYFEQGYIPGPLPADQCFG 161
           XXXXXXXXXXXXXXX VVFGLQY +QGYIPGPLPADQCFG
Sbjct: 121 XXXXXXXXXXXXXXXLVVFGLQYLDQGYIPGPLPADQCFG 160

[Close]

BLAST of Carg00653 vs. TrEMBL
Match: tr|A0A2I4FCV4|A0A2I4FCV4_9ROSI (uncharacterized protein LOC108997585 OS=Juglans regia OX=51240 GN=LOC108997585 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 2.3e-25
Identity = 118/158 (74.68%), Postives = 127/158 (80.38%), Query Frame = 0


Query: 4   SSSSLVRALPVNRLNSFCKPANPRTAVKIQAMAKEGSESEG-GIAETLAIAGGLVATPVI 63
           +S+SL         NS  + A   T +K+  MAKE SES G G+ E  AIAGGLV+TPVI
Sbjct: 13  ASNSLSSPRSNGPFNSTHERARSYTPLKLLGMAKESSESSGNGVVEKAAIAGGLVSTPVI 72

Query: 64  GWSLYTLKTTGCGLPPGPGGSLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 123
           GWSLYTLKTTGCGLPPGPGGS+G       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 73  GWSLYTLKTTGCGLPPGPGGSIGALEGVSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 132

Query: 124 XXXXXXXXXXXXXXVVFGLQYFEQGYIPGPLPADQCFG 161
           XXXXXXXXXXXXXXVVFGLQYFEQGYIPGPLPAD+CFG
Sbjct: 133 XXXXXXXXXXXXXXVVFGLQYFEQGYIPGPLPADKCFG 170

[Close]

BLAST of Carg00653 vs. TrEMBL
Match: tr|A0A2N9IYS5|A0A2N9IYS5_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57185 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 8.7e-25
Identity = 121/163 (74.23%), Postives = 128/163 (78.53%), Query Frame = 0


Query: 1   MLLSSSSLVRALPVNRLNSF---CKPANPRTAVKIQAMAKEGSESEGGIAETLAIAGGLV 60
           +LLS  S   +LP  R NSF      A   T +K+  MAKE S+S   I E  AIAGGLV
Sbjct: 2   LLLSPPS--TSLPSPRCNSFNFKHGRARLHTPLKLLGMAKESSDSNNDIIEKAAIAGGLV 61

Query: 61  ATPVIGWSLYTLKTTGCGLPPGPGGSLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           +TPVIGWSLYTLK TGCGLPPGPGGS+G       XXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 62  STPVIGWSLYTLKITGCGLPPGPGGSIGALEGVSYXXXXXXXXXXXXXXXXXXXXXXXXX 121

Query: 121 XXXXXXXXXXXXXXXXXXXVVFGLQYFEQGYIPGPLPADQCFG 161
           XXXXXXXXXXXXXXXXXXXVVFGLQYFEQGYIPGPLPADQCFG
Sbjct: 122 XXXXXXXXXXXXXXXXXXXVVFGLQYFEQGYIPGPLPADQCFG 162

[Close]

BLAST of Carg00653 vs. TrEMBL
Match: tr|A0A2P4I0A8|A0A2P4I0A8_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_55537 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 8.7e-25
Identity = 119/163 (73.01%), Postives = 129/163 (79.14%), Query Frame = 0


Query: 1   MLLSSSSLVRALPVNRLNSFC---KPANPRTAVKIQAMAKEGSESEGGIAETLAIAGGLV 60
           +LLS  S   +LP    NSF      A   T +K+  MAKE S+S   I E +A+AGGLV
Sbjct: 2   LLLSPPS--TSLPSPLRNSFSFKDGRARSHTPLKLVGMAKESSDSNNDIIEKVAVAGGLV 61

Query: 61  ATPVIGWSLYTLKTTGCGLPPGPGGSLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           +TPVIGWSLYTLKTTGCGLPPGPGGS+G       XXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 62  STPVIGWSLYTLKTTGCGLPPGPGGSIGALEGVSYXXXXXXXXXXXXXXXXXXXXXXXXX 121

Query: 121 XXXXXXXXXXXXXXXXXXXVVFGLQYFEQGYIPGPLPADQCFG 161
           XXXXXXXXXXXXXXXXXXXVVFGLQYF+QGYIPGPLPADQCFG
Sbjct: 122 XXXXXXXXXXXXXXXXXXXVVFGLQYFQQGYIPGPLPADQCFG 162

The following BLAST results are available for this feature:

BLAST of Carg00653 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022950150.1	8.5e-48	100.00	uncharacterized protein LOC111453326 [Cucurbita moschata] >XP_023544302.1 unchar...	[more]
XP_022978571.1	7.2e-47	98.75	uncharacterized protein LOC111478511 [Cucurbita maxima]	[more]
XP_008440700.1	3.7e-43	90.00	PREDICTED: uncharacterized protein LOC103485040 [Cucumis melo]	[more]
XP_004143505.1	3.1e-42	88.75	PREDICTED: uncharacterized protein LOC101218070 [Cucumis sativus] >KGN48822.1 hy...	[more]
XP_018829482.1	3.5e-25	74.68	PREDICTED: uncharacterized protein LOC108997585 [Juglans regia]	[more]

BLAST of Carg00653 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G50685.1	1.1e-20	74.62	unknown protein	[more]

BLAST of Carg00653 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg00653 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B1A0\|A0A1S3B1A0_CUCME	2.4e-43	90.00	uncharacterized protein LOC103485040 OS=Cucumis melo OX=3656 GN=LOC103485040 PE=...	[more]
tr\|A0A0A0KKC0\|A0A0A0KKC0_CUCSA	2.1e-42	88.75	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G502600 PE=4 SV=1	[more]
tr\|A0A2I4FCV4\|A0A2I4FCV4_9ROSI	2.3e-25	74.68	uncharacterized protein LOC108997585 OS=Juglans regia OX=51240 GN=LOC108997585 P...	[more]
tr\|A0A2N9IYS5\|A0A2N9IYS5_FAGSY	8.7e-25	74.23	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57185 PE=4 SV=1	[more]
tr\|A0A2P4I0A8\|A0A2P4I0A8_QUESU	8.7e-25	73.01	Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_55537 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg00653-RA	Carg00653-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37231	FAMILY NOT NAMED	coord: 24..160

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg00653	Cla014203	Watermelon (97103) v1	carwmB0407
Carg00653	Csa6G502600	Cucumber (Chinese Long) v2	carcuB0441
Carg00653	MELO3C007820	Melon (DHL92) v3.5.1	carmeB0414
Carg00653	CSPI06G30910	Wild cucumber (PI 183967)	carcpiB0446
Carg00653	Cucsa.127370	Cucumber (Gy14) v1	carcgyB0468
Carg00653	CmaCh03G007590	Cucurbita maxima (Rimu)	carcmaB0567
Carg00653	CmoCh03G007860	Cucurbita moschata (Rifu)	carcmoB0551
Carg00653	Lsi01G006840	Bottle gourd (USVL1VR-Ls)	carlsiB364
Carg00653	CsGy6G030430	Cucumber (Gy14) v2	carcgybB0418
Carg00653	MELO3C007820.2	Melon (DHL92) v3.6.1	carmedB0418
Carg00653	CsaV3_6G046170	Cucumber (Chinese Long) v3	carcucB0442
Carg00653	Cla97C01G018860	Watermelon (97103) v2	carwmbB0426
Carg00653	Bhi03G000996	Wax gourd	carwgoB0491

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg00653	Silver-seed gourd	carcarB426
Carg00653	Silver-seed gourd	carcarB430
Carg00653	Cucumber (Gy14) v2	carcgybB0412
Carg00653	Cucurbita maxima (Rimu)	carcmaB0571
Carg00653	Cucurbita moschata (Rifu)	carcmoB0543
Carg00653	Cucurbita moschata (Rifu)	carcmoB0554
Carg00653	Cucurbita pepo (Zucchini)	carcpeB0554
Carg00653	Cucurbita pepo (Zucchini)	carcpeB0563
Carg00653	Cucurbita pepo (Zucchini)	carcpeB0572
Carg00653	Wild cucumber (PI 183967)	carcpiB0439
Carg00653	Cucumber (Chinese Long) v2	carcuB0434
Carg00653	Cucumber (Chinese Long) v3	carcucB0436
Carg00653	Bottle gourd (USVL1VR-Ls)	carlsiB371
Carg00653	Melon (DHL92) v3.5.1	carmeB0404
Carg00653	Melon (DHL92) v3.6.1	carmedB0408
Carg00653	Watermelon (Charleston Gray)	carwcgB0397
Carg00653	Watermelon (Charleston Gray)	carwcgB0401
Carg00653	Watermelon (97103) v2	carwmbB0432