Carg00585 (gene) Silver-seed gourd

Overview
NameCarg00585
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionRhodanese-like domain containing protein
LocationCucurbita_argyrosperma_scaffold_014 : 434268 .. 436224 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTTTTCCATTGAGGAAGTGGAGTCACCTCCATCCCAACGCCTATTCCCACTTACTTCTCCAGCAGATGTGGCAAAAAACGACATGTCGTCTCAATGGATTGAATCTGTTTCAATTTCCGGCTTCAATTCAATCCCCTTATTTCATTATAAATAGAAACTTCCATACCGCTCATTCGCAGTCAAATTTCGCCGGCAGTTTCCGCCGCCGTTGTTATTCCGCCCACTTTTCCGCGACGGTTTCTGGTTTTCCAGACTTCAAAAACCGCCCACAGATCTCGAACCACCGGAATCGCACCGCTAATCATGGGCTCCCTCGATAGGTCTCTCGTCTCTTTTATTTAATTTATACATCCTTCCTTCTTTTTCTCTCATTATAATTCTCCAATGACGGCTAATTCCTTTCTCCTTCTTCCATTTGGATTCCTGCTCTGTTTTCTCGTCTCCGGCAGCTTCGAAGCCGGAATCGTCACCGTCGACGTCAAAACCGCCAAGAACCTCCTCCATTCCGGCTACGCTTTTCTCGACGTCAGGTTGAATTTGCTCGTTTTTTGCGTCAATTTTTTTCCGCATTTTAGTTGATTTTGTTAAAATTATCGGTAGGACTGTCGAGGAGTTCAAGGAAGGGCACGTAGCGACGGAGAAGATCGTCAATATTCCGTATCAATTCAATTCTCCAGACGGTTAATTCTTTTTATAATCGCTTCGGTATCCTTCTGTTCTTCCGTTTGAATTTTCCGGTGAAGTGACTGAACGCCGCGGCGATGGACTTTTCAGGTAGGGTGAAGAATGATCGGTTTCTGGAGGAGGTGTCGGCGGTCTTTAAGAAAGACGACCGCCTCGTCGTGGTAATTTCCCTTTTTATCCTTTTATTCACTAAATATTTATTAAATTATTACGTATTTATTCTATAAACGTTCAATTTAGCTAATTTAGCTAATTTAGCTTTAGGAACTATTAAATTATTATATGTAAAATTAAAATAAACTTAAACCTTTTATATTATAAAATAAAAAAGTGTCCAAAATATAATATTATTTTATTTTAAGTGTTTTGAATTTTAAAAATATCTAATAAGTTATTTAATTTTAAATTTCAATTATTAAAAAAAAAAACCCCTTTAACTTTTATGGATAAATTTTTAAAAGATTAGATATAAAATAAATAATTTAATAATTTATTTAATTACAGAATTTAAAATTTAGAATGATAATCGGTTGAATTTAAAATTATTTCAAATAATATATTTCGTTGGTAAAAATAAATTATGGAAACCAATGTTACGTATACAAAAGAGATTTTATAAATAATTGACATAATTAAATTTTATACATTATCGTCGAGTATTTTATATGATTCAAACTACGATTTTTTTCAAATAGGGTTGTCGAAGTGGGGTAAGATCTTTGCTCGCCATTGAAGACCTCCGAAATGATGTAAGTTATATTTTAATTTTTTTAATTATTATAGGTTTCGTTCAATTTTAACATTTAAATGTTTAAATAAATCGACGTAAATTCATTTAAAATTTCAAAAGAAAATGGAAATCAATTGATTTAATAATTAAAGTATACTAATTACTATTAATTATTTAATTCTTAATCATGCACAGAATAAAATTTAAAATTCCAATGGATTAAATTATAATTCTTTATAGGGGAAAAAATAAAATAATATTAAAAAAATCTGCAGGGCTTCAAGCATTTGACAGATCTGGGCGGAGGGCATCTGGCTTGGCTGGAGTATGGATTTCCTGTGGCTAAGCCAAAAGTGAAGACAACTGATCCAAAGAGTGTGGACCTTAAGGCTGACGAGCTTTGATCGTACAATAAATAAATAAATAAAAATAAATAAAACGCATCAATAATTTGTCTTCTGGTTGTAAAGTTTATTATTGAATAATTTTATTTTATCTGATAAGTTTTAAAATAATAATATATTTAAATCAGTTGATTT

mRNA sequence

ATGCTTTTTCCATTGAGGAAGTGGAGTCACCTCCATCCCAACGCCTATTCCCACTTACTTCTCCAGCAGATGTGGCAAAAAACGACATGTCGTCTCAATGGATTGAATCTGTTTCAATTTCCGGCTTCAATTCAATCCCCTTATTTCATTATAAATAGAAACTTCCATACCGCTCATTCGCAGTCAAATTTCGCCGGCAGTTTCCGCCGCCGTTGTTATTCCGCCCACTTTTCCGCGACGACTTCAAAAACCGCCCACAGATCTCGAACCACCGGAATCGCACCGCTAATCATGGGCTCCCTCGATAGCTTCGAAGCCGGAATCGTCACCGTCGACGTCAAAACCGCCAAGAACCTCCTCCATTCCGGCTACGCTTTTCTCGACGTCAGGACTGTCGAGGAGTTCAAGGAAGGGCACGTAGCGACGGAGAAGATCGTCAATATTCCGTATCAATTCAATTCTCCAGACGGTAGGGTGAAGAATGATCGGTTTCTGGAGGAGGTGTCGGCGGTCTTTAAGAAAGACGACCGCCTCGTCGTGGGTTGTCGAAGTGGGGTAAGATCTTTGCTCGCCATTGAAGACCTCCGAAATGATGGCTTCAAGCATTTGACAGATCTGGGCGGAGGGCATCTGGCTTGGCTGGAGTATGGATTTCCTGTGGCTAAGCCAAAAGTGAAGACAACTGATCCAAAGAGTGTGGACCTTAAGGCTGACGAGCTTTGATCGTACAATAAATAAATAAATAAAAATAAATAAAACGCATCAATAATTTGTCTTCTGGTTGTAAAGTTTATTATTGAATAATTTTATTTTATCTGATAAGTTTTAAAATAATAATATATTTAAATCAGTTGATTT

Coding sequence (CDS)

ATGCTTTTTCCATTGAGGAAGTGGAGTCACCTCCATCCCAACGCCTATTCCCACTTACTTCTCCAGCAGATGTGGCAAAAAACGACATGTCGTCTCAATGGATTGAATCTGTTTCAATTTCCGGCTTCAATTCAATCCCCTTATTTCATTATAAATAGAAACTTCCATACCGCTCATTCGCAGTCAAATTTCGCCGGCAGTTTCCGCCGCCGTTGTTATTCCGCCCACTTTTCCGCGACGACTTCAAAAACCGCCCACAGATCTCGAACCACCGGAATCGCACCGCTAATCATGGGCTCCCTCGATAGCTTCGAAGCCGGAATCGTCACCGTCGACGTCAAAACCGCCAAGAACCTCCTCCATTCCGGCTACGCTTTTCTCGACGTCAGGACTGTCGAGGAGTTCAAGGAAGGGCACGTAGCGACGGAGAAGATCGTCAATATTCCGTATCAATTCAATTCTCCAGACGGTAGGGTGAAGAATGATCGGTTTCTGGAGGAGGTGTCGGCGGTCTTTAAGAAAGACGACCGCCTCGTCGTGGGTTGTCGAAGTGGGGTAAGATCTTTGCTCGCCATTGAAGACCTCCGAAATGATGGCTTCAAGCATTTGACAGATCTGGGCGGAGGGCATCTGGCTTGGCTGGAGTATGGATTTCCTGTGGCTAAGCCAAAAGTGAAGACAACTGATCCAAAGAGTGTGGACCTTAAGGCTGACGAGCTTTGA

Protein sequence

MLFPLRKWSHLHPNAYSHLLLQQMWQKTTCRLNGLNLFQFPASIQSPYFIINRNFHTAHSQSNFAGSFRRRCYSAHFSATTSKTAHRSRTTGIAPLIMGSLDSFEAGIVTVDVKTAKNLLHSGYAFLDVRTVEEFKEGHVATEKIVNIPYQFNSPDGRVKNDRFLEEVSAVFKKDDRLVVGCRSGVRSLLAIEDLRNDGFKHLTDLGGGHLAWLEYGFPVAKPKVKTTDPKSVDLKADEL
Homology
[Close]
BLAST of Carg00585 vs. NCBI nr
Match: XP_023545011.1 (thiosulfate sulfurtransferase 18-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 317.0 bits (811), Expect = 5.5e-83
Identity = 158/160 (98.75%), Postives = 159/160 (99.38%), Query Frame = 0 

Query: 81  TSKTAHRSRTTGIAPLIMGSLDSFEAGIVTVDVKTAKNLLHSGYAFLDVRTVEEFKEGHV 140
           TSKTAHRSRTTGIAPLIMGSLDSFEAGIVTVDVKTAKNLLHSGYAFLDVRTVEEFKEGHV
Sbjct: 28  TSKTAHRSRTTGIAPLIMGSLDSFEAGIVTVDVKTAKNLLHSGYAFLDVRTVEEFKEGHV 87

Query: 141 ATEKIVNIPYQFNSPDGRVKNDRFLEEVSAVFKKDDRLVVGCRSGVRSLLAIEDLRNDGF 200
           ATEKIVNIPYQFNSPDGRVKNDRFLE+VSAVFKKDDRLVVGCRSGVRSLLAIEDLRNDGF
Sbjct: 88  ATEKIVNIPYQFNSPDGRVKNDRFLEDVSAVFKKDDRLVVGCRSGVRSLLAIEDLRNDGF 147

Query: 201 KHLTDLGGGHLAWLEYGFPVAKPKVKTTDPKSVDLKADEL 241
           KHLTDLGGGHLAWLEYGFPVAKPKVK TDPKSVDLKADEL
Sbjct: 148 KHLTDLGGGHLAWLEYGFPVAKPKVK-TDPKSVDLKADEL 186

[Close]
BLAST of Carg00585 vs. NCBI nr
Match: XP_022949669.1 (thiosulfate sulfurtransferase 18-like [Cucurbita moschata])

HSP 1 Score: 285.0 bits (728), Expect = 2.3e-73
Identity = 138/143 (96.50%), Postives = 141/143 (98.60%), Query Frame = 0 

Query: 98  MGSLDSFEAGIVTVDVKTAKNLLHSGYAFLDVRTVEEFKEGHVATEKIVNIPYQFNSPDG 157
           MGSLDSFEAGIVTVDVKTAKNLLHSGYAFLDVRTVEEFKEGHVA EKIVNIPYQFNSPDG
Sbjct: 1   MGSLDSFEAGIVTVDVKTAKNLLHSGYAFLDVRTVEEFKEGHVANEKIVNIPYQFNSPDG 60

Query: 158 RVKNDRFLEEVSAVFKKDDRLVVGCRSGVRSLLAIEDLRNDGFKHLTDLGGGHLAWLEYG 217
           RVKND+FLEEVSAVFKKDDRLVVGCRSGVRSLLAIEDLRNDGF+HLTDLGGGHLAWL YG
Sbjct: 61  RVKNDQFLEEVSAVFKKDDRLVVGCRSGVRSLLAIEDLRNDGFEHLTDLGGGHLAWLAYG 120

Query: 218 FPVAKPKVKTTDPKSVDLKADEL 241
           FPVAKPKVKTTDPKSVDL+ADEL
Sbjct: 121 FPVAKPKVKTTDPKSVDLQADEL 143

[Close]
BLAST of Carg00585 vs. NCBI nr
Match: XP_022977637.1 (thiosulfate sulfurtransferase 18-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 283.5 bits (724), Expect = 6.7e-73
Identity = 139/143 (97.20%), Postives = 139/143 (97.20%), Query Frame = 0 

Query: 98  MGSLDSFEAGIVTVDVKTAKNLLHSGYAFLDVRTVEEFKEGHVATEKIVNIPYQFNSPDG 157
           MGSLDSFEAGIVTVDVKTAKNLLHSGYAFLDVRTVEEFKEGHVATEKIVNIPYQFNSPDG
Sbjct: 1   MGSLDSFEAGIVTVDVKTAKNLLHSGYAFLDVRTVEEFKEGHVATEKIVNIPYQFNSPDG 60

Query: 158 RVKNDRFLEEVSAVFKKDDRLVVGCRSGVRSLLAIEDLRNDGFKHLTDLGGGHLAWLEYG 217
           RVKNDRFLEEVSAVFKKDDRLVV CRSGVRSLLAIEDL NDGFKHLTDLGGGHLAWLE G
Sbjct: 61  RVKNDRFLEEVSAVFKKDDRLVVSCRSGVRSLLAIEDLLNDGFKHLTDLGGGHLAWLENG 120

Query: 218 FPVAKPKVKTTDPKSVDLKADEL 241
           FPVAKPKVKT DPKSVDLKADEL
Sbjct: 121 FPVAKPKVKTADPKSVDLKADEL 143

[Close]
BLAST of Carg00585 vs. NCBI nr
Match: XP_022977636.1 (thiosulfate sulfurtransferase 18-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 273.9 bits (699), Expect = 5.3e-70
Identity = 134/138 (97.10%), Postives = 134/138 (97.10%), Query Frame = 0 

Query: 103 SFEAGIVTVDVKTAKNLLHSGYAFLDVRTVEEFKEGHVATEKIVNIPYQFNSPDGRVKND 162
           SFEAGIVTVDVKTAKNLLHSGYAFLDVRTVEEFKEGHVATEKIVNIPYQFNSPDGRVKND
Sbjct: 22  SFEAGIVTVDVKTAKNLLHSGYAFLDVRTVEEFKEGHVATEKIVNIPYQFNSPDGRVKND 81

Query: 163 RFLEEVSAVFKKDDRLVVGCRSGVRSLLAIEDLRNDGFKHLTDLGGGHLAWLEYGFPVAK 222
           RFLEEVSAVFKKDDRLVV CRSGVRSLLAIEDL NDGFKHLTDLGGGHLAWLE GFPVAK
Sbjct: 82  RFLEEVSAVFKKDDRLVVSCRSGVRSLLAIEDLLNDGFKHLTDLGGGHLAWLENGFPVAK 141

Query: 223 PKVKTTDPKSVDLKADEL 241
           PKVKT DPKSVDLKADEL
Sbjct: 142 PKVKTADPKSVDLKADEL 159

[Close]
BLAST of Carg00585 vs. NCBI nr
Match: XP_011658053.1 (PREDICTED: uncharacterized protein LOC101221593 isoform X2 [Cucumis sativus])

HSP 1 Score: 256.5 bits (654), Expect = 8.8e-65
Identity = 147/244 (60.25%), Postives = 165/244 (67.62%), Query Frame = 0 

Query: 1   MLFPLRKWSHLHPNAYSHLLLQQMWQKTTCRLNGLNLFQFPASIQ--SPYFIINRNFHTA 60
           ++  LRKWSHL PN        +   KTTCR         P + Q    Y  I RNF+  
Sbjct: 7   IILQLRKWSHLQPNPTPSFFSGRCC-KTTCR---------PTNQQRSESYLTIKRNFNVL 66

Query: 61  HSQSNFAGSFRRRCYSAHFSATTSKTAHRSRTTGIAPLIMGSLDSFEAGIVTVDVKTAKN 120
               N               + T KTAH  RT GI P IMGSLDS ++GIVTVDVKTA N
Sbjct: 67  LRHQNLPAVSAAVLLPP--QSPTLKTAHGFRTAGIRPPIMGSLDSSDSGIVTVDVKTADN 126

Query: 121 LLHSGYAFLDVRTVEEFKEGHVATEKIVNIPYQFNSPDGRVKNDRFLEEVSAVFKKDDRL 180
           LLHSGYAFLDVRTVEEFKEGH+ATE+IVNIPY  NSP+GRVKN +FL EVSAVFKKDDRL
Sbjct: 127 LLHSGYAFLDVRTVEEFKEGHMATERIVNIPYLLNSPNGRVKNAQFLAEVSAVFKKDDRL 186

Query: 181 VVGCRSGVRSLLAIEDLRNDGFKHLTDLGGGHLAWLEYGFPVAKPKVK-TTDPKSV-DLK 240
           VVGCRSGVRSLLAIE+L+NDG+KHL DLGGGHLAWL+   PVA P  K T DPK + D K
Sbjct: 187 VVGCRSGVRSLLAIEELQNDGYKHLKDLGGGHLAWLDNALPVANPIEKLTNDPKVIEDRK 238

[Close]
BLAST of Carg00585 vs. TAIR10
Match: AT5G66170.2 (sulfurtransferase 18)

HSP 1 Score: 129.8 bits (325), Expect = 2.3e-30
Identity = 59/115 (51.30%), Postives = 82/115 (71.30%), Query Frame = 0 

Query: 108 IVTVDVKTAKNLLHSGYAFLDVRTVEEFKEGHVATEKIVNIPYQFNSPDGRVKNDRFLEE 167
           +V+VDV  AK LL SG+ +LDVRT +EF+ GH    KIVNIPY  N+P GRVKN  FLE+
Sbjct: 14  VVSVDVSQAKTLLQSGHQYLDVRTQDEFRRGHCEAAKIVNIPYMLNTPQGRVKNQEFLEQ 73

Query: 168 VSAVFKKDDRLVVGCRSGVRSLLAIEDL--RNDGFKHLTDLGGGHLAWLEYGFPV 221
           VS++    D ++VGC+SG RSL A  +L     G+K + ++GGG+LAW+++ FP+
Sbjct: 74  VSSLLNPADDILVGCQSGARSLKATTELVAAVSGYKKVRNVGGGYLAWVDHSFPI 128

[Close]
BLAST of Carg00585 vs. TAIR10
Match: AT2G17850.1 (Rhodanese/Cell cycle control phosphatase superfamily protein)

HSP 1 Score: 127.5 bits (319), Expect = 1.1e-29
Identity = 64/136 (47.06%), Postives = 91/136 (66.91%), Query Frame = 0 

Query: 105 EAGIVTVDVKTAKNLLHSGYAFLDVRTVEEFKEGHVATEKIVNIPYQFNSPDGRVKNDRF 164
           E  ++T+DV  A+ LL SGY FLDVRTVEEFK+GHV +E + N+PY   +P G+  N  F
Sbjct: 29  EPKVITIDVNQAQKLLDSGYTFLDVRTVEEFKKGHVDSENVFNVPYWLYTPQGQEINPNF 88

Query: 165 LEEVSAVFKKDDRLVVGCRSGVRSLLAIEDLRNDGFKHLTDLGGGHLAWLEYGFPVAKPK 224
           L+ VS++  + D L++GC+SGVRSL A + L + GFK + ++ GG++AW+   FPV   K
Sbjct: 89  LKHVSSLCNQTDHLILGCKSGVRSLHATKFLVSSGFKTVRNMDGGYIAWVNKRFPV---K 148

Query: 225 VKTTDPKSVDLKADEL 241
           V     +  +LK DEL
Sbjct: 149 V-----EHKELKYDEL 156

[Close]
BLAST of Carg00585 vs. TAIR10
Match: AT2G21045.1 (Rhodanese/Cell cycle control phosphatase superfamily protein)

HSP 1 Score: 119.0 bits (297), Expect = 4.0e-27
Identity = 56/116 (48.28%), Postives = 79/116 (68.10%), Query Frame = 0 

Query: 108 IVTVDVKTAKNLLHSGYAFLDVRTVEEFKEGHVATEKIVNIPYQFNSPDGRVKNDRFLEE 167
           + TVDV TAK  L +G+ +LDVRT EEF + HV  E+ +NIPY F + +GRV N  FL +
Sbjct: 41  VETVDVYTAKGFLSTGHRYLDVRTNEEFAKSHV--EEALNIPYMFKTDEGRVINPDFLSQ 100

Query: 168 VSAVFKKDDRLVVGCRSGVRSLLAIEDLRNDGFKHLTDLGGGHLAWLEYGFPVAKP 224
           V++V KKD+ L+V C +G R   A  DL N+G+ H+ ++GGG+ AW++ GF   KP
Sbjct: 101 VASVCKKDEHLIVACNAGGRGSRACVDLLNEGYDHVANMGGGYSAWVDAGFAGDKP 154

[Close]
BLAST of Carg00585 vs. TAIR10
Match: AT4G35770.1 (Rhodanese/Cell cycle control phosphatase superfamily protein)

HSP 1 Score: 106.3 bits (264), Expect = 2.7e-23
Identity = 48/111 (43.24%), Postives = 69/111 (62.16%), Query Frame = 0 

Query: 110 TVDVKTAKNLLHSGYAFLDVRTVEEFKEGHVATEKIVNIPYQFNSPDGRVKNDRFLEEVS 169
           +V V+ A+ L  +GY +LDVRT +EF  GH    + +N+PY +    G VKN  FL +VS
Sbjct: 72  SVPVRVARELAQAGYRYLDVRTPDEFSIGH--PTRAINVPYMYRVGSGMVKNPSFLRQVS 131

Query: 170 AVFKKDDRLVVGCRSGVRSLLAIEDLRNDGFKHLTDLGGGHLAWLEYGFPV 221
           + F+K D +++GC SG  S +A  DL   GF  +TD+ GG++AW E   PV
Sbjct: 132 SHFRKHDEIIIGCESGQMSFMASTDLLTAGFTAITDIAGGYVAWTENELPV 180

[Close]
BLAST of Carg00585 vs. TAIR10
Match: AT5G66040.1 (sulfurtransferase protein 16)

HSP 1 Score: 99.0 bits (245), Expect = 4.3e-21
Identity = 48/110 (43.64%), Postives = 68/110 (61.82%), Query Frame = 0 

Query: 110 TVDVKTAKNLLHSGYAFLDVRTVEEFKEGHVATEKIVNIPYQFNSPDGRVKNDRFLEEVS 169
           +V V  A +LL +G+ +LDVRT EEF +GH      +N+PY      G  KN  FLE+VS
Sbjct: 10  SVSVTVAHDLLLAGHRYLDVRTPEEFSQGHAC--GAINVPYMNRGASGMSKNPDFLEQVS 69

Query: 170 AVFKKDDRLVVGCRSGVRSLLAIEDLRNDGFKHLTDLGGGHLAWLEYGFP 220
           + F + D ++VGC+SG RS+ A  DL + GF  + D+ GG+ AW + G P
Sbjct: 70  SHFGQSDNIIVGCQSGGRSIKATTDLLHAGFTGVKDIVGGYSAWAKNGLP 117

[Close]
BLAST of Carg00585 vs. Swiss-Prot
Match: sp|Q9FKW8|STR18_ARATH (Thiosulfate sulfurtransferase 18 OS=Arabidopsis thaliana OX=3702 GN=STR18 PE=1 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 2.8e-30
Identity = 59/113 (52.21%), Postives = 82/113 (72.57%), Query Frame = 0 

Query: 108 IVTVDVKTAKNLLHSGYAFLDVRTVEEFKEGHVATEKIVNIPYQFNSPDGRVKNDRFLEE 167
           +V+VDV  AK LL SG+ +LDVRT +EF+ GH    KIVNIPY  N+P GRVKN  FLE+
Sbjct: 14  VVSVDVSQAKTLLQSGHQYLDVRTQDEFRRGHCEAAKIVNIPYMLNTPQGRVKNQEFLEQ 73

Query: 168 VSAVFKKDDRLVVGCRSGVRSLLAIEDLRNDGFKHLTDLGGGHLAWLEYGFPV 221
           VS++    D ++VGC+SG RSL A  +L   G+K + ++GGG+LAW+++ FP+
Sbjct: 74  VSSLLNPADDILVGCQSGARSLKATTELVAAGYKKVRNVGGGYLAWVDHSFPI 126

[Close]
BLAST of Carg00585 vs. Swiss-Prot
Match: sp|F4IPI4|STR17_ARATH (Rhodanese-like domain-containing protein 17 OS=Arabidopsis thaliana OX=3702 GN=STR17 PE=2 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 2.0e-28
Identity = 64/136 (47.06%), Postives = 91/136 (66.91%), Query Frame = 0 

Query: 105 EAGIVTVDVKTAKNLLHSGYAFLDVRTVEEFKEGHVATEKIVNIPYQFNSPDGRVKNDRF 164
           E  ++T+DV  A+ LL SGY FLDVRTVEEFK+GHV +E + N+PY   +P G+  N  F
Sbjct: 29  EPKVITIDVNQAQKLLDSGYTFLDVRTVEEFKKGHVDSENVFNVPYWLYTPQGQEINPNF 88

Query: 165 LEEVSAVFKKDDRLVVGCRSGVRSLLAIEDLRNDGFKHLTDLGGGHLAWLEYGFPVAKPK 224
           L+ VS++  + D L++GC+SGVRSL A + L + GFK + ++ GG++AW+   FPV   K
Sbjct: 89  LKHVSSLCNQTDHLILGCKSGVRSLHATKFLVSSGFKTVRNMDGGYIAWVNKRFPV---K 148

Query: 225 VKTTDPKSVDLKADEL 241
           V     +  +LK DEL
Sbjct: 149 V-----EHKELKYDEL 156

[Close]
BLAST of Carg00585 vs. Swiss-Prot
Match: sp|Q8RUD6|HARC1_ARATH (Protein HIGH ARSENIC CONTENT 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=HAC1 PE=1 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 7.2e-26
Identity = 56/116 (48.28%), Postives = 79/116 (68.10%), Query Frame = 0 

Query: 108 IVTVDVKTAKNLLHSGYAFLDVRTVEEFKEGHVATEKIVNIPYQFNSPDGRVKNDRFLEE 167
           + TVDV TAK  L +G+ +LDVRT EEF + HV  E+ +NIPY F + +GRV N  FL +
Sbjct: 41  VETVDVYTAKGFLSTGHRYLDVRTNEEFAKSHV--EEALNIPYMFKTDEGRVINPDFLSQ 100

Query: 168 VSAVFKKDDRLVVGCRSGVRSLLAIEDLRNDGFKHLTDLGGGHLAWLEYGFPVAKP 224
           V++V KKD+ L+V C +G R   A  DL N+G+ H+ ++GGG+ AW++ GF   KP
Sbjct: 101 VASVCKKDEHLIVACNAGGRGSRACVDLLNEGYDHVANMGGGYSAWVDAGFAGDKP 154

[Close]
BLAST of Carg00585 vs. Swiss-Prot
Match: sp|Q38853|STR15_ARATH (Rhodanese-like domain-containing protein 15, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=STR15 PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 4.8e-22
Identity = 48/111 (43.24%), Postives = 69/111 (62.16%), Query Frame = 0 

Query: 110 TVDVKTAKNLLHSGYAFLDVRTVEEFKEGHVATEKIVNIPYQFNSPDGRVKNDRFLEEVS 169
           +V V+ A+ L  +GY +LDVRT +EF  GH    + +N+PY +    G VKN  FL +VS
Sbjct: 72  SVPVRVARELAQAGYRYLDVRTPDEFSIGH--PTRAINVPYMYRVGSGMVKNPSFLRQVS 131

Query: 170 AVFKKDDRLVVGCRSGVRSLLAIEDLRNDGFKHLTDLGGGHLAWLEYGFPV 221
           + F+K D +++GC SG  S +A  DL   GF  +TD+ GG++AW E   PV
Sbjct: 132 SHFRKHDEIIIGCESGQMSFMASTDLLTAGFTAITDIAGGYVAWTENELPV 180

[Close]
BLAST of Carg00585 vs. Swiss-Prot
Match: sp|P27626|DIN1_RAPSA (Senescence-associated protein DIN1 OS=Raphanus sativus OX=3726 GN=DIN1 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.1e-21
Identity = 48/111 (43.24%), Postives = 69/111 (62.16%), Query Frame = 0 

Query: 110 TVDVKTAKNLLHSGYAFLDVRTVEEFKEGHVATEKIVNIPYQFNSPDGRVKNDRFLEEVS 169
           +V V+ A+ L  +GY  LDVRT +EF  GH    + +N+PY +    G VKN  FL +VS
Sbjct: 73  SVPVRVARELAQAGYKHLDVRTPDEFSIGH--PSRAINVPYMYRVGSGMVKNPSFLRQVS 132

Query: 170 AVFKKDDRLVVGCRSGVRSLLAIEDLRNDGFKHLTDLGGGHLAWLEYGFPV 221
           + F+K D +++GC SG RSL+A  +L   GF  +TD+ GG++ W E   PV
Sbjct: 133 SHFRKHDEIIIGCESGERSLMASTELLTAGFTGVTDIAGGYVPWTENELPV 181

[Close]
BLAST of Carg00585 vs. TrEMBL
Match: tr|A0A0A0KJE7|A0A0A0KJE7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G507040 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 1.4e-63
Identity = 147/245 (60.00%), Postives = 165/245 (67.35%), Query Frame = 0 

Query: 1   MLFPLRKWSHLHPNAYSHLLLQQMWQKTTCRLNGLNLFQFPASIQ--SPYFIINRNFHTA 60
           ++  LRKWSHL PN        +   KTTCR         P + Q    Y  I RNF+  
Sbjct: 7   IILQLRKWSHLQPNPTPSFFSGRCC-KTTCR---------PTNQQRSESYLTIKRNFNVL 66

Query: 61  HSQSNFAGSFRRRCYSAHFSATTSKTAHRSRTTGIAPLIMGSLD-SFEAGIVTVDVKTAK 120
               N               + T KTAH  RT GI P IMGSLD S ++GIVTVDVKTA 
Sbjct: 67  LRHQNLPAVSAAVLLPP--QSPTLKTAHGFRTAGIRPPIMGSLDSSSDSGIVTVDVKTAD 126

Query: 121 NLLHSGYAFLDVRTVEEFKEGHVATEKIVNIPYQFNSPDGRVKNDRFLEEVSAVFKKDDR 180
           NLLHSGYAFLDVRTVEEFKEGH+ATE+IVNIPY  NSP+GRVKN +FL EVSAVFKKDDR
Sbjct: 127 NLLHSGYAFLDVRTVEEFKEGHMATERIVNIPYLLNSPNGRVKNAQFLAEVSAVFKKDDR 186

Query: 181 LVVGCRSGVRSLLAIEDLRNDGFKHLTDLGGGHLAWLEYGFPVAKPKVK-TTDPKSV-DL 240
           LVVGCRSGVRSLLAIE+L+NDG+KHL DLGGGHLAWL+   PVA P  K T DPK + D 
Sbjct: 187 LVVGCRSGVRSLLAIEELQNDGYKHLKDLGGGHLAWLDNALPVANPIEKLTNDPKVIEDR 239

[Close]
BLAST of Carg00585 vs. TrEMBL
Match: tr|A0A1S3B1L3|A0A1S3B1L3_CUCME (thiosulfate sulfurtransferase 18 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485140 PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 1.9e-63
Identity = 144/242 (59.50%), Postives = 162/242 (66.94%), Query Frame = 0 

Query: 1   MLFPLRKWSHLHPNAYSHLLLQQMWQKTTCRLNGLNLFQFPASIQSPYFIINRNFHTAHS 60
           ++  LRKWSHL  N  +         KTTCR       +   +I+        NFH    
Sbjct: 7   IILRLRKWSHLQHNP-TPTFFSGRCCKTTCRPTNQERSESNLTIKG-------NFHVLLR 66

Query: 61  QSNFAGSFRRRCYSAHFSATTSKTAHRSRTTGIAPLIMGSLDSFEAGIVTVDVKTAKNLL 120
             N               + T KTAH  RT GI P IMGSLDS ++GIVTVDVKTA NLL
Sbjct: 67  HQNLPAVSAAVVLPP--QSPTLKTAHGFRTAGIRPPIMGSLDSSDSGIVTVDVKTADNLL 126

Query: 121 HSGYAFLDVRTVEEFKEGHVATEKIVNIPYQFNSPDGRVKNDRFLEEVSAVFKKDDRLVV 180
           HSGYAFLDVRTVEEFKEGHVATE+IVNIPY  NSP+GR+KN +FL EVSAVFKKDDRLVV
Sbjct: 127 HSGYAFLDVRTVEEFKEGHVATERIVNIPYLLNSPNGRMKNAQFLAEVSAVFKKDDRLVV 186

Query: 181 GCRSGVRSLLAIEDLRNDGFKHLTDLGGGHLAWLEYGFPVAKPKVK-TTDPKSV-DLKAD 240
           GCRSGVRSLLAIE+L+N+G+KHL DLGGGHLAWLE   PVA P  K T DPK + D K D
Sbjct: 187 GCRSGVRSLLAIEELQNNGYKHLKDLGGGHLAWLENALPVANPNEKLTNDPKVIKDCKID 238

[Close]
BLAST of Carg00585 vs. TrEMBL
Match: tr|A0A1S3B236|A0A1S3B236_CUCME (uncharacterized protein LOC103485140 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485140 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 1.4e-50
Identity = 129/242 (53.31%), Postives = 144/242 (59.50%), Query Frame = 0 

Query: 1   MLFPLRKWSHLHPNAYSHLLLQQMWQKTTCRLNGLNLFQFPASIQSPYFIINRNFHTAHS 60
           ++  LRKWSHL  N  +         KTTCR       +   +I+        NFH    
Sbjct: 7   IILRLRKWSHLQHNP-TPTFFSGRCCKTTCRPTNQERSESNLTIKG-------NFHVLLR 66

Query: 61  QSNFAGSFRRRCYSAHFSATTSKTAHRSRTTGIAPLIMGSLDSFEAGIVTVDVKTAKNLL 120
             N               + T KTAH  RT GI P IMGSLDS ++GIVTVDVKTA NLL
Sbjct: 67  HQNLPAVSAAVVLPP--QSPTLKTAHGFRTAGIRPPIMGSLDSSDSGIVTVDVKTADNLL 126

Query: 121 HSGYAFLDVRTVEEFKEGHVATEKIVNIPYQFNSPDGRVKNDRFLEEVSAVFKKDDRLVV 180
           HSGYAFLDVRTVEEFKEGHVATE+IVNIPY  NSP+GR+KN +FL EVSAVFKKDDRLVV
Sbjct: 127 HSGYAFLDVRTVEEFKEGHVATERIVNIPYLLNSPNGRMKNAQFLAEVSAVFKKDDRLVV 186

Query: 181 GCRSGVRSLLAIEDLRNDGFKHLTDLGGGHLAWLEYGFPVAKPKVK-TTDPKSV-DLKAD 240
                             G+KHL DLGGGHLAWLE   PVA P  K T DPK + D K D
Sbjct: 187 ------------------GYKHLKDLGGGHLAWLENALPVANPNEKLTNDPKVIKDCKID 220

[Close]
BLAST of Carg00585 vs. TrEMBL
Match: tr|A0A2P4M042|A0A2P4M042_QUESU (Thiosulfate sulfurtransferase 18 OS=Quercus suber OX=58331 GN=CFP56_16054 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.9e-39
Identity = 78/129 (60.47%), Postives = 104/129 (80.62%), Query Frame = 0 

Query: 98  MGSLDSFEAGIVTVDVKTAKNLLHSGYAFLDVRTVEEFKEGHVATEKIVNIPYQFNSPDG 157
           MGSL+S  A +VTVDV   K+L++SG+ +LDVRTVEE+K+GHV  +KI+NIPY FN+P+G
Sbjct: 1   MGSLESSGAEVVTVDVHATKDLINSGHKYLDVRTVEEYKKGHVGADKILNIPYMFNTPEG 60

Query: 158 RVKNDRFLEEVSAVFKKDDRLVVGCRSGVRSLLAIEDLRNDGFKHLTDLGGGHLAWLEYG 217
           RVKN +FL EVS+   K+D+L+VGC+SGVRSL A  DL + GFKH++++GGG+LAW+E G
Sbjct: 61  RVKNPQFLSEVSSACNKEDKLIVGCQSGVRSLSATADLLSAGFKHVSNMGGGYLAWVENG 120

Query: 218 FPVAKPKVK 227
           F V KP  K
Sbjct: 121 FLVQKPDAK 129

[Close]
BLAST of Carg00585 vs. TrEMBL
Match: tr|A0A251NCU1|A0A251NCU1_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G170100 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 3.2e-39
Identity = 79/137 (57.66%), Postives = 106/137 (77.37%), Query Frame = 0 

Query: 98  MGSLDSFEAGIVTVDVKTAKNLLHSGYAFLDVRTVEEFKEGHVATEKIVNIPYQFNSPDG 157
           MGS++S  + +VT+DV+ AK+LL SGY ++DVRTVEE+K+GHV  EKI+NIPY FN+P+G
Sbjct: 1   MGSIESSGSEVVTIDVQAAKDLLKSGYGYVDVRTVEEYKKGHVDAEKILNIPYLFNTPEG 60

Query: 158 RVKNDRFLEEVSAVFKKDDRLVVGCRSGVRSLLAIEDLRNDGFKHLTDLGGGHLAWLEYG 217
           RVKN +FL+EVS+   K+D LVVGC+SGVRSL A  DL   GFKH  ++GGG+ AW+E+ 
Sbjct: 61  RVKNPQFLQEVSSACNKEDLLVVGCQSGVRSLSATTDLLTAGFKHANNMGGGYHAWVEHH 120

Query: 218 FPVAKPKVKTTDPKSVD 235
           FPV KP+    + + VD
Sbjct: 121 FPVTKPEDAGKNNQEVD 137

The following BLAST results are available for this feature:
BLAST of Carg00585 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023545011.15.5e-8398.75thiosulfate sulfurtransferase 18-like isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_022949669.12.3e-7396.50thiosulfate sulfurtransferase 18-like [Cucurbita moschata][more]
XP_022977637.16.7e-7397.20thiosulfate sulfurtransferase 18-like isoform X2 [Cucurbita maxima][more]
XP_022977636.15.3e-7097.10thiosulfate sulfurtransferase 18-like isoform X1 [Cucurbita maxima][more]
XP_011658053.18.8e-6560.25PREDICTED: uncharacterized protein LOC101221593 isoform X2 [Cucumis sativus][more]
BLAST of Carg00585 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G66170.22.3e-3051.30sulfurtransferase 18[more]
AT2G17850.11.1e-2947.06Rhodanese/Cell cycle control phosphatase superfamily protein[more]
AT2G21045.14.0e-2748.28Rhodanese/Cell cycle control phosphatase superfamily protein[more]
AT4G35770.12.7e-2343.24Rhodanese/Cell cycle control phosphatase superfamily protein[more]
AT5G66040.14.3e-2143.64sulfurtransferase protein 16[more]
BLAST of Carg00585 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9FKW8|STR18_ARATH2.8e-3052.21Thiosulfate sulfurtransferase 18 OS=Arabidopsis thaliana OX=3702 GN=STR18 PE=1 S... [more]
sp|F4IPI4|STR17_ARATH2.0e-2847.06Rhodanese-like domain-containing protein 17 OS=Arabidopsis thaliana OX=3702 GN=S... [more]
sp|Q8RUD6|HARC1_ARATH7.2e-2648.28Protein HIGH ARSENIC CONTENT 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN... [more]
sp|Q38853|STR15_ARATH4.8e-2243.24Rhodanese-like domain-containing protein 15, chloroplastic OS=Arabidopsis thalia... [more]
sp|P27626|DIN1_RAPSA1.1e-2143.24Senescence-associated protein DIN1 OS=Raphanus sativus OX=3726 GN=DIN1 PE=2 SV=1[more]
BLAST of Carg00585 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KJE7|A0A0A0KJE7_CUCSA1.4e-6360.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G507040 PE=4 SV=1[more]
tr|A0A1S3B1L3|A0A1S3B1L3_CUCME1.9e-6359.50thiosulfate sulfurtransferase 18 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485... [more]
tr|A0A1S3B236|A0A1S3B236_CUCME1.4e-5053.31uncharacterized protein LOC103485140 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A2P4M042|A0A2P4M042_QUESU1.9e-3960.47Thiosulfate sulfurtransferase 18 OS=Quercus suber OX=58331 GN=CFP56_16054 PE=4 S... [more]
tr|A0A251NCU1|A0A251NCU1_PRUPE3.2e-3957.66Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G170100 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036873Rhodanese-like_dom_sf
IPR001763Rhodanese-like_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg00585-RACarg00585-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001763Rhodanese-like domainSMARTSM00450rhod_4coord: 111..219
e-value: 1.4E-11
score: 54.5
IPR001763Rhodanese-like domainPFAMPF00581Rhodanesecoord: 114..214
e-value: 9.7E-7
score: 29.2
IPR001763Rhodanese-like domainPROSITEPS50206RHODANESE_3coord: 120..222
score: 15.142
IPR036873Rhodanese-like domain superfamilyGENE3DG3DSA:3.40.250.10coord: 103..221
e-value: 1.8E-27
score: 97.7
IPR036873Rhodanese-like domain superfamilySUPERFAMILYSSF52821Rhodanese/Cell cycle control phosphatasecoord: 107..220
NoneNo IPR availablePANTHERPTHR44542FAMILY NOT NAMEDcoord: 105..227
NoneNo IPR availablePANTHERPTHR44542:SF3RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 17-RELATEDcoord: 105..227
NoneNo IPR availableCDDcd00158RHODcoord: 115..213
e-value: 1.23237E-15
score: 68.4802

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg00585CmoCh20G007570Cucurbita moschata (Rifu)carcmoB0549
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg00585Carg16182Silver-seed gourdcarcarB370
The following block(s) are covering this gene:
GeneOrganismBlock
Carg00585Melon (DHL92) v3.6.1carmedB0414
Carg00585Silver-seed gourdcarcarB422
Carg00585Silver-seed gourdcarcarB425
Carg00585Silver-seed gourdcarcarB430
Carg00585Cucumber (Gy14) v2carcgybB0413
Carg00585Cucumber (Gy14) v2carcgybB0418
Carg00585Cucumber (Gy14) v1carcgyB0466
Carg00585Cucumber (Gy14) v1carcgyB0472
Carg00585Cucurbita maxima (Rimu)carcmaB0560
Carg00585Cucurbita maxima (Rimu)carcmaB0564
Carg00585Cucurbita maxima (Rimu)carcmaB0567
Carg00585Cucurbita maxima (Rimu)carcmaB0571
Carg00585Cucurbita moschata (Rifu)carcmoB0543
Carg00585Cucurbita moschata (Rifu)carcmoB0547
Carg00585Cucurbita moschata (Rifu)carcmoB0551
Carg00585Cucurbita moschata (Rifu)carcmoB0554
Carg00585Cucurbita pepo (Zucchini)carcpeB0554
Carg00585Cucurbita pepo (Zucchini)carcpeB0559
Carg00585Cucurbita pepo (Zucchini)carcpeB0561
Carg00585Cucurbita pepo (Zucchini)carcpeB0563
Carg00585Cucurbita pepo (Zucchini)carcpeB0572
Carg00585Wild cucumber (PI 183967)carcpiB0440
Carg00585Wild cucumber (PI 183967)carcpiB0441
Carg00585Wild cucumber (PI 183967)carcpiB0446
Carg00585Cucumber (Chinese Long) v2carcuB0435
Carg00585Cucumber (Chinese Long) v2carcuB0436
Carg00585Cucumber (Chinese Long) v2carcuB0441
Carg00585Cucumber (Chinese Long) v3carcucB0437
Carg00585Cucumber (Chinese Long) v3carcucB0438
Carg00585Cucumber (Chinese Long) v3carcucB0442
Carg00585Bottle gourd (USVL1VR-Ls)carlsiB363
Carg00585Bottle gourd (USVL1VR-Ls)carlsiB364
Carg00585Bottle gourd (USVL1VR-Ls)carlsiB368
Carg00585Bottle gourd (USVL1VR-Ls)carlsiB371
Carg00585Melon (DHL92) v3.5.1carmeB0402
Carg00585Melon (DHL92) v3.5.1carmeB0410
Carg00585Melon (DHL92) v3.5.1carmeB0414
Carg00585Melon (DHL92) v3.6.1carmedB0407
Carg00585Melon (DHL92) v3.6.1carmedB0418
Carg00585Watermelon (Charleston Gray)carwcgB0395
Carg00585Watermelon (Charleston Gray)carwcgB0397
Carg00585Watermelon (Charleston Gray)carwcgB0401
Carg00585Watermelon (97103) v1carwmB0398
Carg00585Watermelon (97103) v1carwmB0407
Carg00585Watermelon (97103) v2carwmbB0426
Carg00585Watermelon (97103) v2carwmbB0427
Carg00585Watermelon (97103) v2carwmbB0432
Carg00585Wax gourdcarwgoB0488