Carg00509 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg00509
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	pollen-specific leucine-rich repeat extensin-like protein 1
Location	Cucurbita_argyrosperma_scaffold_014 : 89169 .. 90015 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTTTTCTTTTGGTCTTCCTCCATTTAAGCTCAGTTCCAGATCGGAGCAGCTTCACTTGAGCTTCAGCCATGGAGGAAAAGGTATCTTCTTCCTTGATCTCCTTCACCGGCGCACTGATTTTGATATCACTTTCTAAAAATTCTAACTTTTTTTTTGTTGCAGACGGTGCTCATGGTGTTGAAAGTTGACCTCCAATGCGATCGTTGTTTCAAGAAAGTCAAGAAAGTTCTTGCCAAAATTCCTCGTACGTCGTCGTTCCATTAACAATTTTATTGCTGAATCTTTACCCACTTACGTTTATAATTTTTTGATTCTAGAAATTCGAGACCAGGCTTATAATGAGAAGCAAGGAATCGTGTTGATCAAAGTTGTGTGCTGTAAGCCTGAAATGATTATGAACAAAATTTGCTGCAAAGGGAATGGATCCATTAAGAGCATCGAGATCAAAGAGCCTGAAAAGAATAAAGAAGAGAAGAAAGGAGGGGAAAAGCCAAAAGTGGTGGCGCAACTGGTTCGAGGCTATTCGCCGCCGCCCGACTCTGTTTACTGCTATTCATGTTACGAGGGTCGACCCTGTTACCGATGCCACGTCTACGGGATTCCGACGGCACCGCCCTGCTATGTCGGGATGCCGGTTTATGACAGCTACGGCGGTGGGTACGGTGGAAGTGGGTACTGTCATACCGGGTGCTCTGTTATGTGAATCCAATCTGCTATGAGACCCATGTTCGTCCGGAGGGTAAATTATGAACAATCTTGAAAATGTGTGCCCTTTTTGTTTTTTTGTATTGAAACTAAATTGGTTTCTTTTAAGAAAATAAAGAAAATGAGCAACATTGTGTCGCG

mRNA sequence

TGTTTTCTTTTGGTCTTCCTCCATTTAAGCTCAGTTCCAGATCGGAGCAGCTTCACTTGAGCTTCAGCCATGGAGGAAAAGACGGTGCTCATGGTGTTGAAAGTTGACCTCCAATGCGATCGTTGTTTCAAGAAAGTCAAGAAAGTTCTTGCCAAAATTCCTCAAATTCGAGACCAGGCTTATAATGAGAAGCAAGGAATCGTGTTGATCAAAGTTGTGTGCTGTAAGCCTGAAATGATTATGAACAAAATTTGCTGCAAAGGGAATGGATCCATTAAGAGCATCGAGATCAAAGAGCCTGAAAAGAATAAAGAAGAGAAGAAAGGAGGGGAAAAGCCAAAAGTGGTGGCGCAACTGGTTCGAGGCTATTCGCCGCCGCCCGACTCTGTTTACTGCTATTCATGTTACGAGGGTCGACCCTGTTACCGATGCCACGTCTACGGGATTCCGACGGCACCGCCCTGCTATGTCGGGATGCCGGTTTATGACAGCTACGGCGGTGGGTACGGTGGAAGTGGGTACTGTCATACCGGGTGCTCTGTTATGTGAATCCAATCTGCTATGAGACCCATGTTCGTCCGGAGGGTAAATTATGAACAATCTTGAAAATGTGTGCCCTTTTTGTTTTTTTGTATTGAAACTAAATTGGTTTCTTTTAAGAAAATAAAGAAAATGAGCAACATTGTGTCGCG

Coding sequence (CDS)

ATGGAGGAAAAGACGGTGCTCATGGTGTTGAAAGTTGACCTCCAATGCGATCGTTGTTTCAAGAAAGTCAAGAAAGTTCTTGCCAAAATTCCTCAAATTCGAGACCAGGCTTATAATGAGAAGCAAGGAATCGTGTTGATCAAAGTTGTGTGCTGTAAGCCTGAAATGATTATGAACAAAATTTGCTGCAAAGGGAATGGATCCATTAAGAGCATCGAGATCAAAGAGCCTGAAAAGAATAAAGAAGAGAAGAAAGGAGGGGAAAAGCCAAAAGTGGTGGCGCAACTGGTTCGAGGCTATTCGCCGCCGCCCGACTCTGTTTACTGCTATTCATGTTACGAGGGTCGACCCTGTTACCGATGCCACGTCTACGGGATTCCGACGGCACCGCCCTGCTATGTCGGGATGCCGGTTTATGACAGCTACGGCGGTGGGTACGGTGGAAGTGGGTACTGTCATACCGGGTGCTCTGTTATGTGA

Protein sequence

MEEKTVLMVLKVDLQCDRCFKKVKKVLAKIPQIRDQAYNEKQGIVLIKVVCCKPEMIMNKICCKGNGSIKSIEIKEPEKNKEEKKGGEKPKVVAQLVRGYSPPPDSVYCYSCYEGRPCYRCHVYGIPTAPPCYVGMPVYDSYGGGYGGSGYCHTGCSVM

Homology

[Close]

BLAST of Carg00509 vs. NCBI nr
Match: XP_022949890.1 (protein PYRICULARIA ORYZAE RESISTANCE 21-like [Cucurbita moschata])

HSP 1 Score: 310.5 bits (794), Expect = 3.4e-81
Identity = 150/159 (94.34%), Postives = 150/159 (94.34%), Query Frame = 0


Query: 1   MEEKTVLMVLKVDLQCDRCFKKVKKVLAKIPQIRDQAYNEKQGIVLIKVVCCKPEMIMNK 60
           MEEKTVLMVLKVDLQCDRCFKKVKKVLAKIPQIRDQAYNEKQGIVLIKVVCCKPEMIMNK
Sbjct: 1   MEEKTVLMVLKVDLQCDRCFKKVKKVLAKIPQIRDQAYNEKQGIVLIKVVCCKPEMIMNK 60

Query: 61  ICCKGNGSIKSIEIKEPEKNKEEKKGGEKPKVVAQLVRGYSPPPDSVYCYSCYEGRPCYR 120
           ICCKGNGSIKSIEIKEPEKNKEEKKGGEKPKVVAQLVRGYSPPPDSVYCYSCYEGRPCYR
Sbjct: 61  ICCKGNGSIKSIEIKEPEKNKEEKKGGEKPKVVAQLVRGYSPPPDSVYCYSCYEGRPCYR 120

Query: 121 CHVYGIPTAPPCYVGMPVYDSYGGGYGGSGYCHTGCSVM 160
           CHVYGIP APP        DSYGGGYGGSGYCHTGCSVM
Sbjct: 121 CHVYGIPAAPPXXXXXXXXDSYGGGYGGSGYCHTGCSVM 159

[Close]

BLAST of Carg00509 vs. NCBI nr
Match: XP_023544776.1 (protein PYRICULARIA ORYZAE RESISTANCE 21-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 280.0 bits (715), Expect = 4.9e-72
Identity = 140/159 (88.05%), Postives = 143/159 (89.94%), Query Frame = 0


Query: 1   MEEKTVLMVLKVDLQCDRCFKKVKKVLAKIPQIRDQAYNEKQGIVLIKVVCCKPEMIMNK 60
           MEEKTVLMVLKVDLQCDRCFKKVKKVLAK PQIRDQAYNEKQGIVLIKVVCCKPEMIMNK
Sbjct: 1   MEEKTVLMVLKVDLQCDRCFKKVKKVLAKFPQIRDQAYNEKQGIVLIKVVCCKPEMIMNK 60

Query: 61  ICCKGNGSIKSIEIKEPEKNKEEKKGGEKPKVVAQLVRGYSPPPDSVYCYSCYEGRPCYR 120
           ICCKGNGSIKSIEIK+PEK KE    GEKPKVVAQ V+GYSPPP SVYC SCYEGRPCYR
Sbjct: 61  ICCKGNGSIKSIEIKQPEKKKE----GEKPKVVAQPVQGYSPPPYSVYCCSCYEGRPCYR 120

Query: 121 CHVYGIPTAPPCYVGMPVYDSYGGGYGGSGYCHTGCSVM 160
           CHVYGIP A      +PVYDSYGGGYGGSGYCHTGCSVM
Sbjct: 121 CHVYGIPAAGTV---IPVYDSYGGGYGGSGYCHTGCSVM 152

[Close]

BLAST of Carg00509 vs. NCBI nr
Match: XP_004134803.2 (PREDICTED: protein PXR1-like [Cucumis sativus])

HSP 1 Score: 180.6 bits (457), Expect = 4.1e-42
Identity = 102/199 (51.26%), Postives = 113/199 (56.78%), Query Frame = 0


Query: 1   MEEKTVLMVLKVDLQCDRCFKKVKKVLAKIPQIRDQAYNEKQGIVLIKVVCCKPEMIMNK 60
           MEEK V M+LKVDL+CDRC+KKVKKVLAK PQIRDQ YNEKQG+V+IKVVCC PE IM K
Sbjct: 1   MEEKVVFMMLKVDLECDRCYKKVKKVLAKFPQIRDQVYNEKQGLVIIKVVCCTPEKIMKK 60

Query: 61  ICCKGNGSIKSIEIKEPE------------------------------------------ 120
           IC KG+GSIKSIEIKEPE                                          
Sbjct: 61  ICSKGDGSIKSIEIKEPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 -------------KNKEEKKGGEKPKVVAQLVRGYSPPPDSVYCYSCYEGRPCYRCHVYG 145
                                    KVVA  V+GY PPP SV+  S YEG+PCY+ H YG
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXKVVAHPVQGYPPPPYSVHGGSFYEGQPCYQYHGYG 180

[Close]

BLAST of Carg00509 vs. NCBI nr
Match: XP_022977716.1 (protein PYRICULARIA ORYZAE RESISTANCE 21-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 174.5 bits (441), Expect = 2.9e-40
Identity = 97/159 (61.01%), Postives = 101/159 (63.52%), Query Frame = 0


Query: 1   MEEKTVLMVLKVDLQCDRCFKKVKKVLAKIPQIRDQAYNEKQGIVLIKVVCCKPEMIMNK 60
           MEEKTVLMVLKVDL+CDRC KKVKKVLAK PQIRDQAYNEKQGIVLIKVVCCKPEMI   
Sbjct: 1   MEEKTVLMVLKVDLECDRCCKKVKKVLAKFPQIRDQAYNEKQGIVLIKVVCCKPEMIXXX 60

Query: 61  ICCKGNGSIKSIEIKEPEKNKEEKKGGEKPKVVAQLVRGYSPPPDSVYCYSCYEGRPCYR 120
                +GSIKSIE                    AQ V+GYSPPP  VY  SCYEGRPCYR
Sbjct: 61  XXXXXDGSIKSIEXXXXXXXXXXXXXXXXXXXXAQPVQGYSPPPYPVYYCSCYEGRPCYR 120

Query: 121 CHVYGIPTAPPCYVGMPVYDSYGGGYGGSGYCHTGCSVM 160
           CH YGIP APP                     +TGCSVM
Sbjct: 121 CHGYGIPAAPPXXXXXXXXXXXXXXXXXXXXXNTGCSVM 159

[Close]

BLAST of Carg00509 vs. NCBI nr
Match: KGN49037.1 (hypothetical protein Csa_6G511040 [Cucumis sativus])

HSP 1 Score: 171.8 bits (434), Expect = 1.9e-39
Identity = 97/192 (50.52%), Postives = 108/192 (56.25%), Query Frame = 0


Query: 8   MVLKVDLQCDRCFKKVKKVLAKIPQIRDQAYNEKQGIVLIKVVCCKPEMIMNKICCKGNG 67
           M+LKVDL+CDRC+KKVKKVLAK PQIRDQ YNEKQG+V+IKVVCC PE IM KIC KG+G
Sbjct: 1   MMLKVDLECDRCYKKVKKVLAKFPQIRDQVYNEKQGLVIIKVVCCTPEKIMKKICSKGDG 60

Query: 68  SIKSIEIKEPE------------------------------------------------- 127
           SIKSIEIKEPE                                                 
Sbjct: 61  SIKSIEIKEPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 128 ------KNKEEKKGGEKPKVVAQLVRGYSPPPDSVYCYSCYEGRPCYRCHVYGIPTAPPC 145
                             KVVA  V+GY PPP SV+  S YEG+PCY+ H YGIP APPC
Sbjct: 121 XXXXXXXXXXXXXXXXXXKVVAHPVQGYPPPPYSVHGGSFYEGQPCYQYHGYGIPAAPPC 180

[Close]

BLAST of Carg00509 vs. TAIR10
Match: AT4G16380.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 99.0 bits (245), Expect = 2.8e-21
Identity = 46/70 (65.71%), Postives = 56/70 (80.00%), Query Frame = 0


Query: 2  EEKTVLMVLKVDLQCDRCFKKVKKVLAKIPQIRDQAYNEKQGIVLIKVVCCKPEMIMNKI 61
          +EK  +M LKVDL C +C+KKVKKVL K PQIRDQ ++EK  IV+IKVVCC PE IM+K+
Sbjct: 6  KEKVTMMKLKVDLDCAKCYKKVKKVLCKFPQIRDQLFDEKSNIVIIKVVCCSPERIMDKL 65

Query: 62 CCKGNGSIKS 72
          C KG GSIK+
Sbjct: 66 CSKGGGSIKT 75

[Close]

BLAST of Carg00509 vs. TAIR10
Match: AT1G51090.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 93.2 bits (230), Expect = 1.5e-19
Identity = 65/175 (37.14%), Postives = 80/175 (45.71%), Query Frame = 0


Query: 1   MEEKTVLMVLKVDLQCDRCFKKVKKVLAKIPQIRDQAYNEKQGIVLIKVVCCKPEMIMNK 60
           M EK V+M LKVDL C +C+KKVKK + K PQI D+ ++EK   ++IKVVC  PE +MNK
Sbjct: 1   MAEKVVMMKLKVDLNCSKCYKKVKKAIRKFPQITDELFDEKSNTIIIKVVCYDPERLMNK 60

Query: 61  ICCKGNGSIKSIEIKEPEKNKEEKKGGEKPKVVAQLVRGYSPPPDSVYCYSCYEGRPC-- 120
           +C KG+GSIKSI I EP                                           
Sbjct: 61  LCYKGDGSIKSIVILEPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 ---------YRCHVYGIPTAPPCYVGMPVYDSYGGGYGGSGYCH-----TGCSVM 160
                    Y C  Y       CY G PVY+S+G   GG   CH      GCS+M
Sbjct: 121 XXXXXXWQPYHCGPYYEAQQYQCY-GRPVYESWG---GGRQCCHEDMNSQGCSIM 171

[Close]

BLAST of Carg00509 vs. TAIR10
Match: AT1G49420.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 77.4 bits (189), Expect = 8.8e-15
Identity = 64/193 (33.16%), Postives = 90/193 (46.63%), Query Frame = 0


Query: 2   EEKTVLMVLKVD-LQCDRCFKKVKKVLAKIPQIRDQAYNEKQGIVLIKVVCCKPEMIMNK 61
           +EK   M LK + L  ++ F KVKK L+ IPQ+RDQ + E+   V IKVVCC PE +M+K
Sbjct: 6   KEKVTWMKLKTEPLSNEKNFSKVKKALSSIPQVRDQKFEEETNTVTIKVVCCSPEKVMDK 65

Query: 62  ICCKGNGSIKSIEIKEPEKNKEEK-------------------------KGGEKPKVVAQ 121
           +C KG G+IK IE  +P K+  +K                           G+      +
Sbjct: 66  LCSKGRGAIKLIETIDPAKHVAQKPKEXXXXXXXXXXXXXXXXXXXXXXXXGDPSS--QR 125

Query: 122 LVRGYSPPPDSVYCYSCYEGRPCYRCHVYGIPTAPPCYVGMPVYDSYGG------GYGGS 160
           +  GY+PPP   +     +G P Y        + P  Y   P+Y+SYGG       YGG 
Sbjct: 126 VTHGYNPPPMMGHPVPWSDG-PNYGW------SRPNGYDERPIYNSYGGWQPPPSQYGGR 185

[Close]

BLAST of Carg00509 vs. TrEMBL
Match: tr|A0A0A0KL24|A0A0A0KL24_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511040 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.2e-39
Identity = 97/192 (50.52%), Postives = 108/192 (56.25%), Query Frame = 0


Query: 8   MVLKVDLQCDRCFKKVKKVLAKIPQIRDQAYNEKQGIVLIKVVCCKPEMIMNKICCKGNG 67
           M+LKVDL+CDRC+KKVKKVLAK PQIRDQ YNEKQG+V+IKVVCC PE IM KIC KG+G
Sbjct: 1   MMLKVDLECDRCYKKVKKVLAKFPQIRDQVYNEKQGLVIIKVVCCTPEKIMKKICSKGDG 60

Query: 68  SIKSIEIKEPE------------------------------------------------- 127
           SIKSIEIKEPE                                                 
Sbjct: 61  SIKSIEIKEPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 128 ------KNKEEKKGGEKPKVVAQLVRGYSPPPDSVYCYSCYEGRPCYRCHVYGIPTAPPC 145
                             KVVA  V+GY PPP SV+  S YEG+PCY+ H YGIP APPC
Sbjct: 121 XXXXXXXXXXXXXXXXXXKVVAHPVQGYPPPPYSVHGGSFYEGQPCYQYHGYGIPAAPPC 180

[Close]

BLAST of Carg00509 vs. TrEMBL
Match: tr|A0A1S3B2D2|A0A1S3B2D2_CUCME (protein PXR1-like OS=Cucumis melo OX=3656 GN=LOC103485231 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 2.4e-38
Identity = 101/206 (49.03%), Postives = 110/206 (53.40%), Query Frame = 0


Query: 1   MEEKTVLMVLKVDLQCDRCFKKVKKVLAKIPQIRDQAYNEKQGIVLIKVVCCKPEMIMNK 60
           MEEK VLMVLKVDL+C RC+KKVKKVLAK PQIRDQ YNEKQG V+IKVVCC PE IM K
Sbjct: 1   MEEKVVLMVLKVDLECHRCYKKVKKVLAKFPQIRDQVYNEKQGFVMIKVVCCTPEKIMKK 60

Query: 61  ICCKGNGSIKSIEIKEPE------------------------------------------ 120
           IC KG+GSIKSIEIKEPE                                          
Sbjct: 61  ICSKGDGSIKSIEIKEPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 ------------------KNKEEKKGGEKPKVVAQLVRGYSPPPDSVYCYSCYEGRPCYR 145
                                         KV  Q V+GY PPP SV+  S YEG+PCY+
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVAVQPVQGYPPPPYSVHGGSFYEGQPCYQ 180

[Close]

BLAST of Carg00509 vs. TrEMBL
Match: tr|A0A2P6SFA3|A0A2P6SFA3_ROSCH (Putative heavy metal-associated domain, HMA OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0347351 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 4.2e-27
Identity = 79/163 (48.47%), Postives = 95/163 (58.28%), Query Frame = 0


Query: 2   EEKTVLMVLKVDLQCDRCFKKVKKVLAKIPQIRDQAYNEKQGIVLIKVVCCKPEMIMNKI 61
           E+K  +M+LKVDLQC++C++KVKKVL K P+IRDQ Y+EK   V+IKVVCC PE I +K+
Sbjct: 3   EKKVTIMILKVDLQCEKCYRKVKKVLCKFPEIRDQTYDEKNNQVIIKVVCCSPEKIRDKL 62

Query: 62  CCKGNGSIKSIEIKEPEK--NKEEKKGGEKPKVVAQLVRGYSPPPDSVYCYSCYEGR--- 121
           CCKG G+IKSIEIKEPEK                            +  C  CY GR   
Sbjct: 63  CCKGGGAIKSIEIKEPEKPXXXXXXXXXXXXXXXXXXXXXXXXXXKNPCCMECYGGRPGG 122

Query: 122 PCYRCHVYGIPTAP----PCYVGMPVYDSYGGGYG-GSGYCHT 155
           PC   + YG P AP      Y G PVYDSYGGG    + YC T
Sbjct: 123 PCETGYGYGGP-APYIQYDGYYGRPVYDSYGGGRSYTTSYCVT 164

[Close]

BLAST of Carg00509 vs. TrEMBL
Match: tr|A0A1U8L9P6|A0A1U8L9P6_GOSHI (uncharacterized protein LOC107925210 isoform X1 OS=Gossypium hirsutum OX=3635 GN=LOC107925210 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 6.0e-26
Identity = 94/211 (44.55%), Postives = 110/211 (52.13%), Query Frame = 0


Query: 1   MEEKTVLMVLKVDLQCDRCFKKVKKVLAKIPQIRDQAYNEKQGIVLIKVVCCKPEMIMNK 60
           M EK  +MVLKVDLQC +C+KKVKKVL K PQIRDQ Y+EK   V IKVVCC PE I +K
Sbjct: 1   MAEKVTIMVLKVDLQCRKCYKKVKKVLCKFPQIRDQIYDEKTNTVTIKVVCCSPEKIRDK 60

Query: 61  ICCKGNGSIKSIEIKEPEKNKEEK---------------------------KGGEKPKVV 120
           +C KG GSIKSIE+K P K KE +                              + P+ V
Sbjct: 61  LCYKGGGSIKSIELKSPAKPKESEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIPREV 120

Query: 121 A--QLVRGYSPPPDSVYC--YSC-------YEGRPCYRCHVYGIPTAP-PCY--VGMPVY 160
           A  Q V   +P P   Y   Y+C       Y G P Y     G P  P PCY   G PVY
Sbjct: 121 ASQQKVAAPAPLPPMTYAVGYNCSEGYYNGYGGGPTY---YGGPPQQPFPCYETYGRPVY 180

[Close]

BLAST of Carg00509 vs. TrEMBL
Match: tr|A0A2P6SF90|A0A2P6SF90_ROSCH (Putative heavy metal-associated domain, HMA OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0347291 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 7.9e-26
Identity = 77/168 (45.83%), Postives = 93/168 (55.36%), Query Frame = 0


Query: 8   MVLKVDLQCDRCFKKVKKVLAKIPQIRDQAYNEKQGIVLIKVVCCKPEMIMNKICCKGNG 67
           M+LKVDLQC++C++KVKKVL K PQIRDQ Y+EK   V+IKVVCC PE I +K+CCKG G
Sbjct: 1   MILKVDLQCEKCYRKVKKVLCKFPQIRDQTYDEKNNQVIIKVVCCSPEKIRDKLCCKGGG 60

Query: 68  SIKSIEIKEPEKNKEEKKGGEKPKVVAQLVRGYSPPPDSVY--------------CYSCY 127
           +IKSIEIKEPEK K++ K  +                                  C  CY
Sbjct: 61  AIKSIEIKEPEKLKDKPKEAKDVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPCCMDCY 120

Query: 128 EGR---PCYRCHVYG---IPTAPPCYVGMPVYDSYGGGYG-GSGYCHT 155
            GR   PC   + YG   +      Y G PVYDSYGGG    + YC T
Sbjct: 121 GGRPGGPCETGYGYGRLALYIQYDGYYGRPVYDSYGGGRSYTTSYCVT 168

The following BLAST results are available for this feature:

BLAST of Carg00509 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022949890.1	3.4e-81	94.34	protein PYRICULARIA ORYZAE RESISTANCE 21-like [Cucurbita moschata]	[more]
XP_023544776.1	4.9e-72	88.05	protein PYRICULARIA ORYZAE RESISTANCE 21-like [Cucurbita pepo subsp. pepo]	[more]
XP_004134803.2	4.1e-42	51.26	PREDICTED: protein PXR1-like [Cucumis sativus]	[more]
XP_022977716.1	2.9e-40	61.01	protein PYRICULARIA ORYZAE RESISTANCE 21-like isoform X1 [Cucurbita maxima]	[more]
KGN49037.1	1.9e-39	50.52	hypothetical protein Csa_6G511040 [Cucumis sativus]	[more]

BLAST of Carg00509 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G16380.1	2.8e-21	65.71	Heavy metal transport/detoxification superfamily protein	[more]
AT1G51090.1	1.5e-19	37.14	Heavy metal transport/detoxification superfamily protein	[more]
AT1G49420.1	8.8e-15	33.16	Heavy metal transport/detoxification superfamily protein	[more]

BLAST of Carg00509 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg00509 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KL24\|A0A0A0KL24_CUCSA	1.2e-39	50.52	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511040 PE=4 SV=1	[more]
tr\|A0A1S3B2D2\|A0A1S3B2D2_CUCME	2.4e-38	49.03	protein PXR1-like OS=Cucumis melo OX=3656 GN=LOC103485231 PE=4 SV=1	[more]
tr\|A0A2P6SFA3\|A0A2P6SFA3_ROSCH	4.2e-27	48.47	Putative heavy metal-associated domain, HMA OS=Rosa chinensis OX=74649 GN=RchiOB...	[more]
tr\|A0A1U8L9P6\|A0A1U8L9P6_GOSHI	6.0e-26	44.55	uncharacterized protein LOC107925210 isoform X1 OS=Gossypium hirsutum OX=3635 GN...	[more]
tr\|A0A2P6SF90\|A0A2P6SF90_ROSCH	7.9e-26	45.83	Putative heavy metal-associated domain, HMA OS=Rosa chinensis OX=74649 GN=RchiOB...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0030001	metal ion transport

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036163	HMA_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030001	metal ion transport
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg00509-RA	Carg00509-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR22814	COPPER TRANSPORT PROTEIN ATOX1-RELATED	coord: 1..97
None	No IPR available	PANTHER	PTHR22814:SF163	METAL ION BINDING PROTEIN-RELATED	coord: 1..97
IPR036163	Heavy metal-associated domain superfamily	SUPERFAMILY	SSF55008	HMA, heavy metal-associated domain	coord: 8..65

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg00509	Cla014389	Watermelon (97103) v1	carwmB0407
Carg00509	Csa6G511040	Cucumber (Chinese Long) v2	carcuB0441
Carg00509	MELO3C008011	Melon (DHL92) v3.5.1	carmeB0414
Carg00509	ClCG01G021270	Watermelon (Charleston Gray)	carwcgB0397
Carg00509	CSPI06G32830	Wild cucumber (PI 183967)	carcpiB0446
Carg00509	CmaCh13G003650	Cucurbita maxima (Rimu)	carcmaB0559
Carg00509	CmaCh18G006120	Cucurbita maxima (Rimu)	carcmaB0562
Carg00509	CmaCh03G005890	Cucurbita maxima (Rimu)	carcmaB0567
Carg00509	CmaCh07G003590	Cucurbita maxima (Rimu)	carcmaB0571
Carg00509	CmoCh03G006150	Cucurbita moschata (Rifu)	carcmoB0551
Carg00509	CmoCh07G003510	Cucurbita moschata (Rifu)	carcmoB0554
Carg00509	Lsi01G004970	Bottle gourd (USVL1VR-Ls)	carlsiB364
Carg00509	Cp4.1LG19g08080	Cucurbita pepo (Zucchini)	carcpeB0563
Carg00509	Cp4.1LG10g09990	Cucurbita pepo (Zucchini)	carcpeB0554
Carg00509	MELO3C008011.2	Melon (DHL92) v3.6.1	carmedB0418
Carg00509	CsaV3_6G048280	Cucumber (Chinese Long) v3	carcucB0442
Carg00509	Cla97C01G010740	Watermelon (97103) v2	carwmbB0425
Carg00509	Cla97C01G020840	Watermelon (97103) v2	carwmbB0426
Carg00509	Bhi03G000517	Wax gourd	carwgoB0488

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg00509	Carg07885	Silver-seed gourd	carcarB425

The following block(s) are covering this gene:


Gene	Organism	Block
Carg00509	Cucumber (Gy14) v2	carcgybB0408
Carg00509	Cucumber (Gy14) v2	carcgybB0418
Carg00509	Cucumber (Gy14) v1	carcgyB0466
Carg00509	Cucurbita pepo (Zucchini)	carcpeB0564
Carg00509	Wild cucumber (PI 183967)	carcpiB0435