Carg00471 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg00471
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Serine-rich protein
Location	Cucurbita_argyrosperma_scaffold_001 : 2645998 .. 2647323 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGACTTCTTCTTCGAAAACCAGATCCACCGGCCCGGTGCACCGATCACAGTCGCCGGGCGGACGGTTCTGTAACTCCCCGGCGCTGTCGTCTTTTACGTCGGCGTTTGCTTCATCCACTAGCTTAAACTTTTACTCGCATTCTTCTACTTTCCGTTCCGTTGATCACCGCGATTTCCGCAGCCACCATCATCATCGTCGATGCACCTCCCCTAGCCGTGTTAATGTTTTTTCGTCTCCTTCTCTTACTTCTTCTGTCCGTTTTTTAAATTGATAACCGTTCGATTTCTCCGAATCGGTCCGTTATTGTTTCGAGGAAGAATCATCCGGCGTCTAATGTTAAGAGGACCTGTATGTGCTCTCCGACGACGCATCCACGATCGTTCCGGTGTAGTTTTCACAAAAACGTCTCGAGTAGCCATAGCCAGACGGTGTCGTTTCCTTCAATCAGGTTAAATATGCGGAGATCGGCTATGGCCAACTCGATCGTTCGAATCGGCGGTGTGGAAGGAGAGTTGGTGAAGCGAGCATTGACTACTTTGATTCGGCCTTCGTCGCACCAGCAGAGGAGGATAGCGGCATTTATACCTAGATCAAGTCGGCTCGCTGTCATGTCCAAGGTTGACGATGCTTGAATTTACAGCAGAAGATACGGTGATGCCTAAAACTTTATGATCTCAGGTTCGTTGAAGAGCATCAATTTGTGAACGTTTCTGGTTTAGAATTATAGCCGAAAAGAAAACACACCACACGAAGTTGCATAATCGTTCAAAGCAGTATCTGTAGTGAAATTCATTAGATTCAGAATTTGTGACTCGGAAGCAGGACTACTGAGTCGACTGGCCGAGTGTTGTTCGCAGGCTTCGTGGTTTTTTGGCAGAGGATTGAAGAAGAAGAAGAAGAAAAAAAAAACGAACGAACTTACACCTTTGTACATACAACATTGTTTGCTGTGGAAGGAGAAATTCAGACATTTTTACTTAGAATTGAAACCAAACGAAAGCAAAACAAAATTCGAAGATTAATTTCAACAACCTGCAACCGGCATCAATTTGAAAATGATTTATAACACCGTTGGATGATGAGAATTGTGACCTGCTCAATTCCGTTCTATGTGCAGCCTTGGGCTTCCGTGTGTGCCGCCATCGTGATCTGCTCCGATGATCGTGATTTTCGTCCACGTCGTTTCACGTGGTTCCGCTTAATCCGTCCCGTTCATTCCGGTGCCAGGTATTTATTTCTTTACTTTTGCTATGATTCGTTTATTTAGTTGGTGCAGGACGTGCCGCTGGGTGAAATAAAGTCGTCACGATTCAGGCGCTGA

mRNA sequence

ATGGTGACTTCTTCTTCGAAAACCAGATCCACCGGCCCGGTGCACCGATCACAGTCGCCGGGCGGACGGTTCTGTAACTCCCCGGCGCTGTCGTCTTTTACGTCGGCGTTTGCTTCATCCACTAGCTTAAACTTTTACTCGCATTCTTCTACTTTCCGTTCCGTTGATCACCGCGATTTCCGCAGCCACCATCATCATCGTCGATGCACCTCCCCTAGCCGTGTTAATGTTTTTTCGAAGAATCATCCGGCGTCTAATGTTAAGAGGACCTGTATGTGCTCTCCGACGACGCATCCACGATCGTTCCGGTGTAGTTTTCACAAAAACGTCTCGAGTAGCCATAGCCAGACGGTGTCGTTTCCTTCAATCAGGTTAAATATGCGGAGATCGGCTATGGCCAACTCGATCGTTCGAATCGGCGGTGTGGAAGGAGAGTTGGTGAAGCGAGCATTGACTACTTTGATTCGGCCTTCGTCGCACCAGCAGAGGAGGATAGCGGCATTTATACCTAGATCAAGTCGGCTCGCTGTCATGTCCAAGCCTTGGGCTTCCGTGTGTGCCGCCATCGTGATCTGCTCCGATGATCGTGATTTTCGTCCACGTCGTTTCACGTGGTTCCGCTTAATCCGTCCCGTTCATTCCGGTGCCAGGCGCTGA

Coding sequence (CDS)

ATGGTGACTTCTTCTTCGAAAACCAGATCCACCGGCCCGGTGCACCGATCACAGTCGCCGGGCGGACGGTTCTGTAACTCCCCGGCGCTGTCGTCTTTTACGTCGGCGTTTGCTTCATCCACTAGCTTAAACTTTTACTCGCATTCTTCTACTTTCCGTTCCGTTGATCACCGCGATTTCCGCAGCCACCATCATCATCGTCGATGCACCTCCCCTAGCCGTGTTAATGTTTTTTCGAAGAATCATCCGGCGTCTAATGTTAAGAGGACCTGTATGTGCTCTCCGACGACGCATCCACGATCGTTCCGGTGTAGTTTTCACAAAAACGTCTCGAGTAGCCATAGCCAGACGGTGTCGTTTCCTTCAATCAGGTTAAATATGCGGAGATCGGCTATGGCCAACTCGATCGTTCGAATCGGCGGTGTGGAAGGAGAGTTGGTGAAGCGAGCATTGACTACTTTGATTCGGCCTTCGTCGCACCAGCAGAGGAGGATAGCGGCATTTATACCTAGATCAAGTCGGCTCGCTGTCATGTCCAAGCCTTGGGCTTCCGTGTGTGCCGCCATCGTGATCTGCTCCGATGATCGTGATTTTCGTCCACGTCGTTTCACGTGGTTCCGCTTAATCCGTCCCGTTCATTCCGGTGCCAGGCGCTGA

Protein sequence

MVTSSSKTRSTGPVHRSQSPGGRFCNSPALSSFTSAFASSTSLNFYSHSSTFRSVDHRDFRSHHHHRRCTSPSRVNVFSKNHPASNVKRTCMCSPTTHPRSFRCSFHKNVSSSHSQTVSFPSIRLNMRRSAMANSIVRIGGVEGELVKRALTTLIRPSSHQQRRIAAFIPRSSRLAVMSKPWASVCAAIVICSDDRDFRPRRFTWFRLIRPVHSGARR

Homology

[Close]

BLAST of Carg00471 vs. NCBI nr
Match: XP_022981771.1 (uncharacterized protein LOC111480822 [Cucurbita maxima] >XP_022981772.1 uncharacterized protein LOC111480822 [Cucurbita maxima] >XP_022981773.1 uncharacterized protein LOC111480822 [Cucurbita maxima] >XP_022981774.1 uncharacterized protein LOC111480822 [Cucurbita maxima])

HSP 1 Score: 287.0 bits (733), Expect = 5.5e-74
Identity = 162/209 (77.51%), Postives = 167/209 (79.90%), Query Frame = 0


Query: 1   MVTSSSKTRSTGPVHRSQSPGGRFCNSPALSSFTSAFASSTSLNFYSHSSTFRSVDHRDF 60
           MVTSSSKTRS+GPV RSQSPGGR CN PALSSFTSAFASSTSLNFYSHSSTFRSVDHRDF
Sbjct: 1   MVTSSSKTRSSGPVRRSQSPGGRLCNFPALSSFTSAFASSTSLNFYSHSSTFRSVDHRDF 60

Query: 61  RSHHHHRRCTSPSRVNVFS---------------------------KNHPASNVKRTCMC 120
           RSHHH  RCTSPSRVN FS                           KN  ASNVKRTC+C
Sbjct: 61  RSHHHQPRCTSPSRVNFFSSPSLTSAVRFFVDNRSISPNRSVIVSRKNRSASNVKRTCIC 120

Query: 121 SPTTHPRSFRCSFHKNVSSS--HSQTVSFPSIRLNMRRSAMANSIVRIGGVEGELVKRAL 180
           SPTTHP SFRCS HKNVSSS  +SQTVSFPS RLNMRRSAMANS+VRIGGVEGELVKRAL
Sbjct: 121 SPTTHPGSFRCSLHKNVSSSGGNSQTVSFPSTRLNMRRSAMANSLVRIGGVEGELVKRAL 180

[Close]

BLAST of Carg00471 vs. NCBI nr
Match: XP_023524377.1 (uncharacterized protein LOC111788286 [Cucurbita pepo subsp. pepo] >XP_023524379.1 uncharacterized protein LOC111788286 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 253.1 bits (645), Expect = 8.8e-64
Identity = 147/209 (70.33%), Postives = 151/209 (72.25%), Query Frame = 0


Query: 1   MVTSSSKTRSTGPVHRSQSPGGRFCNSPALSSFTSAFASSTSLNFYSHSSTFRSVDHRDF 60
           MVTSSSKTRS+GPV RSQSPGGRFCNSPALSSFTSA                 SVDHRDF
Sbjct: 1   MVTSSSKTRSSGPVRRSQSPGGRFCNSPALSSFTSAXXXXXXXXXXXXXXXXXSVDHRDF 60

Query: 61  RSHHHHRRCTSPSRVNVFS---------------------------KNHPASNVKRTCMC 120
             HHH  RCTSPSRVNVFS                           KN PASNVKR CMC
Sbjct: 61  VIHHHQPRCTSPSRVNVFSSPSLTSSVRFFVDNRSISPNRSVIVSRKNRPASNVKRICMC 120

Query: 121 SPTTHPRSFRCSFHKNVSSS--HSQTVSFPSIRLNMRRSAMANSIVRIGGVEGELVKRAL 180
           SPTTHP SFRCS HKNVSSS  HSQTVSFPSIRLNMRRSAMANS++RIGGVEGELVKR L
Sbjct: 121 SPTTHPGSFRCSLHKNVSSSGGHSQTVSFPSIRLNMRRSAMANSLIRIGGVEGELVKRVL 180

[Close]

BLAST of Carg00471 vs. NCBI nr
Match: XP_022142372.1 (uncharacterized protein DDB_G0271670 [Momordica charantia])

HSP 1 Score: 213.8 bits (543), Expect = 5.9e-52
Identity = 130/207 (62.80%), Postives = 139/207 (67.15%), Query Frame = 0


Query: 3   TSSSKTRSTGPVHRSQSPGGRFCNSPALSSFTSAFASSTSLNFYSHSSTFRSVDHRDFRS 62
           +SSSKTRS+GPV RS SPGGRFCNSP+LS                        DHRDFRS
Sbjct: 5   SSSSKTRSSGPVIRSLSPGGRFCNSPSLSXXXXXXXXXXXXXXXXXXXXXXXXDHRDFRS 64

Query: 63  HHHHRRCTSPSRVNVFS---------------------------KNHPASNVKRTCMCSP 122
            HH  R TSPSRVNV+S                           KN P SNVK+TCMCSP
Sbjct: 65  -HHQPRSTSPSRVNVYSSPSLAPSVRFFIDNRSISPNRSVIVSRKNRPVSNVKKTCMCSP 124

Query: 123 TTHPRSFRCSFHKNVSSS--HSQTVSFPSIRLNMRRSAMANSIVRIGGVEGELVKRALTT 181
           TTHP SFRCS HKNVSSS  H Q+VSFPS RLNMRRSAMANS+VRIGGVEGE +KRALTT
Sbjct: 125 TTHPGSFRCSLHKNVSSSGGHGQSVSFPSTRLNMRRSAMANSLVRIGGVEGEWMKRALTT 184

[Close]

BLAST of Carg00471 vs. NCBI nr
Match: XP_022976197.1 (uncharacterized protein LOC111476660 [Cucurbita maxima])

HSP 1 Score: 210.3 bits (534), Expect = 6.6e-51
Identity = 129/209 (61.72%), Postives = 136/209 (65.07%), Query Frame = 0


Query: 1   MVTSSSKTRSTGPVHRSQSPGGRFCNSPALSSFTSAFASSTSLNFYSHSSTFRSVDHRDF 60
           + +SSSKTRS+GPV RS SPGGRFCNS +LSS                           F
Sbjct: 2   VTSSSSKTRSSGPVLRSHSPGGRFCNSSSLSSSXXXXXXXXXXXXXXXXXXXXXXXXXXF 61

Query: 61  RSHHHHRRCTSPSRVNVFS---------------------------KNHPASNVKRTCMC 120
           RSHHH  R TSPSRVNV+S                           KN P SNVKRTCMC
Sbjct: 62  RSHHHQPRSTSPSRVNVYSSPSLSPSVRFFIDNRSSSPNRSVIVSRKNRPVSNVKRTCMC 121

Query: 121 SPTTHPRSFRCSFHKNVSS--SHSQTVSFPSIRLNMRRSAMANSIVRIGGVEGELVKRAL 180
           SPTTHP SFRCS HKNVSS  SHSQ  SFPS RLNM RSAMANSIVRIGGVEGELVKRAL
Sbjct: 122 SPTTHPGSFRCSLHKNVSSSGSHSQAASFPSTRLNMWRSAMANSIVRIGGVEGELVKRAL 181

[Close]

BLAST of Carg00471 vs. NCBI nr
Match: XP_008452898.1 (PREDICTED: putative protein TPRXL [Cucumis melo] >ADN34124.1 serine-rich protein [Cucumis melo subsp. melo])

HSP 1 Score: 209.5 bits (532), Expect = 1.1e-50
Identity = 130/207 (62.80%), Postives = 137/207 (66.18%), Query Frame = 0


Query: 3   TSSSKTRSTGPVHRSQSPGGRFCNSPALSSFTSAFASSTSLNFYSHSSTFRSVDHRDFRS 62
           +SSSKTRS+GPV RS SPGGRFCNSP+L                         DHRDF +
Sbjct: 5   SSSSKTRSSGPVLRSLSPGGRFCNSPSLXXXXXXXXXXXXXXXXXXXXXHD--DHRDFPT 64

Query: 63  HHHHRRCTSPSRVNVFS---------------------------KNHPASNVKRTCMCSP 122
           H+H  R TSPSRVNV+S                           KN P SNVKRTCMCSP
Sbjct: 65  HNHQTRSTSPSRVNVYSSPSLTPSVRFFIDNRSSSPNRSVIVSRKNRPVSNVKRTCMCSP 124

Query: 123 TTHPRSFRCSFHKNVSS--SHSQTVSFPSIRLNMRRSAMANSIVRIGGVEGELVKRALTT 181
           TTHP SFRCS HKNVSS   HSQ VSFPS RLNM RSAMANSIVRIGGVEGELVKRALTT
Sbjct: 125 TTHPGSFRCSLHKNVSSGGGHSQMVSFPSTRLNMWRSAMANSIVRIGGVEGELVKRALTT 184

[Close]

BLAST of Carg00471 vs. TAIR10
Match: AT5G11090.1 (serine-rich protein-related)

HSP 1 Score: 141.4 bits (355), Expect = 6.8e-34
Identity = 100/218 (45.87%), Postives = 123/218 (56.42%), Query Frame = 0


Query: 1   MVTSSSKTRSTGPVHRSQSPGGRFCN--SPALSS-------------------------- 60
           MVT+SS+T+S GPV RSQSP GRFC   S A+ S                          
Sbjct: 1   MVTTSSRTKSNGPVLRSQSPSGRFCGGYSRAVPSXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  ------FTSAFASSTSLNFYSHSSTFRSVDHRDFRSHHHHRRCTSPSRVNVFSKNHPASN 120
                       S T +N Y+     +S     FR     R  +  ++    SKN P S+
Sbjct: 61  XXXXXXXXXXXXSPTRVNLYTAQPMSQS-----FRYSLDSRSISPTNKSISVSKNQPPSH 120

Query: 121 ---VKRTCMCSPTTHPRSFRCSFHKNVSSSHSQ-TVSFPSIRLNMRRSAMANSIVRIGGV 180
              + R CMCSPTTHP SFRCS HKNV++ H Q T S+ +  LNMRRSAM NS+VRIGGV
Sbjct: 121 NHKISRRCMCSPTTHPGSFRCSLHKNVANPHGQGTASYTTNGLNMRRSAMTNSLVRIGGV 180

[Close]

BLAST of Carg00471 vs. TAIR10
Match: AT5G25280.1 (serine-rich protein-related)

HSP 1 Score: 129.0 bits (323), Expect = 3.5e-30
Identity = 99/220 (45.00%), Postives = 121/220 (55.00%), Query Frame = 0


Query: 2   VTSSSKTRSTGPVH-RSQSPGGRFCN--SPALSSFTSAF--------------------- 61
           +TSS  TRS G    RS+SP GRFC   S  + S                          
Sbjct: 3   ITSSRTTRSNGSASLRSKSPSGRFCGVYSNRMPSXXXXXXXXXXXXXXXXXXXXXXXXXX 62

Query: 62  -----------ASSTSLNFYSHSSTFRSVDHRDFRSHHHHRRCTSPSRVNVFSKNHPASN 121
                      AS T +N ++ +   +S     FR +    R  SP+R    S N P+++
Sbjct: 63  XXXXXXXXXXSASPTRVNLFTSAPMTQS-----FR-YSIDNRSISPNRSIAVSSNKPSNH 122

Query: 122 VK-----RTCMCSPTTHPRSFRCSFHKNVSSSHSQ-TVSFPSIRLNMRRSAMANSIVRIG 181
            K     R CMCSPTTHP SFRCS HKNV++ H Q T S+ +  LNMRRSAM NS+VRIG
Sbjct: 123 HKIPDSRRRCMCSPTTHPGSFRCSLHKNVANPHGQGTASYTTNGLNMRRSAMTNSLVRIG 182

[Close]

BLAST of Carg00471 vs. TAIR10
Match: AT5G20370.1 (serine-rich protein-related)

HSP 1 Score: 76.6 bits (187), Expect = 2.1e-14
Identity = 49/118 (41.53%), Postives = 66/118 (55.93%), Query Frame = 0


Query: 72  PSRVNVFSKNHPASNVKRTCMCSPTTHPRSFRCSFHKNVSSSHSQTVSFPSIR------- 131
           PS V V S NH     KR C+CSPTTHP SFRCSFH+ +    S+T++  +++       
Sbjct: 56  PSVVTV-SSNH---QTKRKCLCSPTTHPGSFRCSFHRRLEHEKSKTLASSTVKRNNRGDN 115

Query: 132 -------LNMRRSAMANSIVRIGGVEGELVKRAL-TTLIRPSSHQQRRIAAFIPRSSR 175
                  LN+R+ A+ NS+ +IG VE E  +R+L   L +PSS    R   F PR SR
Sbjct: 116 TIRVNVGLNLRKLALMNSLAKIGSVEAERFRRSLAANLAKPSSLHSHRRPEFRPRLSR 169

[Close]

BLAST of Carg00471 vs. TAIR10
Match: AT3G13227.1 (serine-rich protein-related)

HSP 1 Score: 43.5 bits (101), Expect = 1.9e-04
Identity = 23/53 (43.40%), Postives = 34/53 (64.15%), Query Frame = 0


Query: 84  ASNVKRTCMCSPTTHPRSFRCSFH-KNVSSSHSQTVSFPSIRLNMRRSAMANS 136
           +S+V++ C+C+PTTHP SFRC +H +N     S+  S PS  L+M     +NS
Sbjct: 58  SSSVRQNCLCAPTTHPGSFRCRYHRRNAGLGMSRGTSVPS-NLSMLAGGDSNS 109

[Close]

BLAST of Carg00471 vs. TAIR10
Match: AT1G67910.1 (unknown protein)

HSP 1 Score: 42.4 bits (98), Expect = 4.3e-04
Identity = 20/58 (34.48%), Postives = 30/58 (51.72%), Query Frame = 0


Query: 66  HRRCTSPSRVNVFSKNHPASNVKRTCMCSPTTHPRSFRCSFHKNVSSSHSQTVSFPSI 124
           H    S   V     +   S  K  C+CSPTTHP SFRC  H+++S   ++++   S+
Sbjct: 19  HSHFNSAVEVGSRGLSRQTSMTKTNCLCSPTTHPGSFRCRIHRSLSLQRTKSIEAASL 76

[Close]

BLAST of Carg00471 vs. TrEMBL
Match: tr|A0A1S3BUD9|A0A1S3BUD9_CUCME (Uncharacterized protein OS=Cucumis melo OX=3656 GN=LOC103493784 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 7.4e-51
Identity = 130/207 (62.80%), Postives = 137/207 (66.18%), Query Frame = 0


Query: 3   TSSSKTRSTGPVHRSQSPGGRFCNSPALSSFTSAFASSTSLNFYSHSSTFRSVDHRDFRS 62
           +SSSKTRS+GPV RS SPGGRFCNSP+L                         DHRDF +
Sbjct: 5   SSSSKTRSSGPVLRSLSPGGRFCNSPSLXXXXXXXXXXXXXXXXXXXXXHD--DHRDFPT 64

Query: 63  HHHHRRCTSPSRVNVFS---------------------------KNHPASNVKRTCMCSP 122
           H+H  R TSPSRVNV+S                           KN P SNVKRTCMCSP
Sbjct: 65  HNHQTRSTSPSRVNVYSSPSLTPSVRFFIDNRSSSPNRSVIVSRKNRPVSNVKRTCMCSP 124

Query: 123 TTHPRSFRCSFHKNVSS--SHSQTVSFPSIRLNMRRSAMANSIVRIGGVEGELVKRALTT 181
           TTHP SFRCS HKNVSS   HSQ VSFPS RLNM RSAMANSIVRIGGVEGELVKRALTT
Sbjct: 125 TTHPGSFRCSLHKNVSSGGGHSQMVSFPSTRLNMWRSAMANSIVRIGGVEGELVKRALTT 184

[Close]

BLAST of Carg00471 vs. TrEMBL
Match: tr|E5GCC5|E5GCC5_CUCME (Serine-rich protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 7.4e-51
Identity = 130/207 (62.80%), Postives = 137/207 (66.18%), Query Frame = 0


Query: 3   TSSSKTRSTGPVHRSQSPGGRFCNSPALSSFTSAFASSTSLNFYSHSSTFRSVDHRDFRS 62
           +SSSKTRS+GPV RS SPGGRFCNSP+L                         DHRDF +
Sbjct: 5   SSSSKTRSSGPVLRSLSPGGRFCNSPSLXXXXXXXXXXXXXXXXXXXXXHD--DHRDFPT 64

Query: 63  HHHHRRCTSPSRVNVFS---------------------------KNHPASNVKRTCMCSP 122
           H+H  R TSPSRVNV+S                           KN P SNVKRTCMCSP
Sbjct: 65  HNHQTRSTSPSRVNVYSSPSLTPSVRFFIDNRSSSPNRSVIVSRKNRPVSNVKRTCMCSP 124

Query: 123 TTHPRSFRCSFHKNVSS--SHSQTVSFPSIRLNMRRSAMANSIVRIGGVEGELVKRALTT 181
           TTHP SFRCS HKNVSS   HSQ VSFPS RLNM RSAMANSIVRIGGVEGELVKRALTT
Sbjct: 125 TTHPGSFRCSLHKNVSSGGGHSQMVSFPSTRLNMWRSAMANSIVRIGGVEGELVKRALTT 184

[Close]

BLAST of Carg00471 vs. TrEMBL
Match: tr|A0A0A0L364|A0A0A0L364_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G652810 PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 8.2e-50
Identity = 128/207 (61.84%), Postives = 135/207 (65.22%), Query Frame = 0


Query: 3   TSSSKTRSTGPVHRSQSPGGRFCNSPALSSFTSAFASSTSLNFYSHSSTFRSVDHRDFRS 62
           +SSSKTRS+GPV RS SPGGRFCNS                            DHRDF +
Sbjct: 5   SSSSKTRSSGPVLRSLSPGGRFCNSXXXXXXXXXXXXXXXXXXXXXXXXHD--DHRDFPN 64

Query: 63  HHHHRRCTSPSRVNVFS---------------------------KNHPASNVKRTCMCSP 122
           H+HH R TSPSRVNV+S                           KN P SNVKRTCMCSP
Sbjct: 65  HNHHTRSTSPSRVNVYSSPSLTSSVRFFIDNRSSSPNRSVIVSRKNRPVSNVKRTCMCSP 124

Query: 123 TTHPRSFRCSFHKNVSS--SHSQTVSFPSIRLNMRRSAMANSIVRIGGVEGELVKRALTT 181
           TTHP SFRCS HKNVSS   HSQ VSFPS RLNM RSAMANSIVRIGGVEGELVKRALTT
Sbjct: 125 TTHPGSFRCSLHKNVSSGGGHSQVVSFPSTRLNMWRSAMANSIVRIGGVEGELVKRALTT 184

[Close]

BLAST of Carg00471 vs. TrEMBL
Match: tr|K7KTG2|K7KTG2_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100775494 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 4.4e-35
Identity = 103/212 (48.58%), Postives = 120/212 (56.60%), Query Frame = 0


Query: 1   MVTSSSKTRSTGPVHRSQSPGGRFCN-SPALSSFTSAFASSTSLNFYSHSSTFRSVDHRD 60
           M +SSS+T+S+GPV RS SP  RFC+ + + + F                        R 
Sbjct: 1   MASSSSRTKSSGPVLRSLSPSTRFCSYTTSKTPFXXXXXXXXXXXXXXXXXXXXFNQPRQ 60

Query: 61  FRSHHHHRRCTSPSRVNVFS-------------------------------KNHPASNVK 120
             +H HH R  SP+RVN+ S                                N P S  K
Sbjct: 61  HHAHSHH-RAASPTRVNLCSPAPLSSAVRFSIDPRSISPNRSISNQIITTKNNRPISGQK 120

Query: 121 RTCMCSPTTHPRSFRCSFHKNVSSSHSQTVSFPSIRLNMRRSAMANSIVRIGGVEGELVK 180
           +TCMCSPTTHP SFRCS HKN+ SS+    S+PS RLNMRRSAM NS+VRIGGVEGE VK
Sbjct: 121 KTCMCSPTTHPGSFRCSLHKNIGSSNHNADSYPSNRLNMRRSAMKNSLVRIGGVEGEWVK 180

[Close]

BLAST of Carg00471 vs. TrEMBL
Match: tr|A0A251JTP5|A0A251JTP5_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_14G120900 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 7.4e-35
Identity = 110/212 (51.89%), Postives = 128/212 (60.38%), Query Frame = 0


Query: 1   MVTSSSKTRSTGPVHRSQSPGGRFCNSPALSSFTSAFASSTSLNFYSHSSTFRSVDHRDF 60
           M  + S+  S+GPV RS SP GRF + P  S  ++AFASSTS +F S SST        F
Sbjct: 1   MAATDSRRSSSGPVIRSLSPSGRF-HLPR-SPCSNAFASSTS-SFASRSSTL-------F 60

Query: 61  RSHHHHRRCTSPSRVNV-----------FSKNHPA---------------------SNVK 120
            SHH + R  SP+RVN+           FS + P                      S  K
Sbjct: 61  SSHHQNHRSASPTRVNLYGSTPSVPSVRFSLDRPVSPNRAISTINPSRGQQVVRKPSTPK 120

Query: 121 RTCMCSPTTHPRSFRCSFHKNVSSSHSQTVSFPSIRLNMRRSAMANSIVRIGGVEGELVK 180
           RTCMCSPT HP SFRCS HKNV++SHS     P+ RLN RRSAM NS+VRI GVEG+LVK
Sbjct: 121 RTCMCSPTNHPGSFRCSLHKNVNNSHSAVNCSPNTRLNARRSAMTNSLVRICGVEGDLVK 180

The following BLAST results are available for this feature:

BLAST of Carg00471 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022981771.1	5.5e-74	77.51	uncharacterized protein LOC111480822 [Cucurbita maxima] >XP_022981772.1 uncharac...	[more]
XP_023524377.1	8.8e-64	70.33	uncharacterized protein LOC111788286 [Cucurbita pepo subsp. pepo] >XP_023524379....	[more]
XP_022142372.1	5.9e-52	62.80	uncharacterized protein DDB_G0271670 [Momordica charantia]	[more]
XP_022976197.1	6.6e-51	61.72	uncharacterized protein LOC111476660 [Cucurbita maxima]	[more]
XP_008452898.1	1.1e-50	62.80	PREDICTED: putative protein TPRXL [Cucumis melo] >ADN34124.1 serine-rich protein...	[more]

BLAST of Carg00471 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G11090.1	6.8e-34	45.87	serine-rich protein-related	[more]
AT5G25280.1	3.5e-30	45.00	serine-rich protein-related	[more]
AT5G20370.1	2.1e-14	41.53	serine-rich protein-related	[more]
AT3G13227.1	1.9e-04	43.40	serine-rich protein-related	[more]
AT1G67910.1	4.3e-04	34.48	unknown protein	[more]

BLAST of Carg00471 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg00471 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BUD9\|A0A1S3BUD9_CUCME	7.4e-51	62.80	Uncharacterized protein OS=Cucumis melo OX=3656 GN=LOC103493784 PE=4 SV=1	[more]
tr\|E5GCC5\|E5GCC5_CUCME	7.4e-51	62.80	Serine-rich protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|A0A0A0L364\|A0A0A0L364_CUCSA	8.2e-50	61.84	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G652810 PE=4 SV=1	[more]
tr\|K7KTG2\|K7KTG2_SOYBN	4.4e-35	48.58	Uncharacterized protein OS=Glycine max OX=3847 GN=100775494 PE=4 SV=1	[more]
tr\|A0A251JTP5\|A0A251JTP5_MANES	7.4e-35	51.89	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_14G120900 PE=4 SV=...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg00471-RA	Carg00471-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	PANTHER	PTHR33132	FAMILY NOT NAMED	coord: 5..84
None	No IPR available	PANTHER	PTHR33132:SF12	SUBFAMILY NOT NAMED	coord: 5..84 coord: 81..180
None	No IPR available	PANTHER	PTHR33132	FAMILY NOT NAMED	coord: 81..180

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg00471	Cla020996	Watermelon (97103) v1	carwmB0670
Carg00471	ClCG05G016650	Watermelon (Charleston Gray)	carwcgB0650
Carg00471	CmaCh01G015210	Cucurbita maxima (Rimu)	carcmaB0947
Carg00471	CmaCh09G004350	Cucurbita maxima (Rimu)	carcmaB0935
Carg00471	CmoCh09G004410	Cucurbita moschata (Rifu)	carcmoB0909
Carg00471	Lsi04G021050	Bottle gourd (USVL1VR-Ls)	carlsiB611
Carg00471	Cp4.1LG06g03210	Cucurbita pepo (Zucchini)	carcpeB0950
Carg00471	Cla97C05G097670	Watermelon (97103) v2	carwmbB0699
Carg00471	Cla97C08G156870	Watermelon (97103) v2	carwmbB0701

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg00471	Carg02864	Silver-seed gourd	carcarB555

The following block(s) are covering this gene:


Gene	Organism	Block
Carg00471	Silver-seed gourd	carcarB553
Carg00471	Silver-seed gourd	carcarB572
Carg00471	Cucumber (Gy14) v2	carcgybB0656
Carg00471	Cucumber (Gy14) v1	carcgyB0752
Carg00471	Cucurbita maxima (Rimu)	carcmaB0933
Carg00471	Cucurbita maxima (Rimu)	carcmaB0938
Carg00471	Cucurbita moschata (Rifu)	carcmoB0907
Carg00471	Cucurbita moschata (Rifu)	carcmoB0912
Carg00471	Cucurbita moschata (Rifu)	carcmoB0922
Carg00471	Cucurbita pepo (Zucchini)	carcpeB0943
Carg00471	Cucurbita pepo (Zucchini)	carcpeB0948
Carg00471	Wild cucumber (PI 183967)	carcpiB0693
Carg00471	Cucumber (Chinese Long) v2	carcuB0681
Carg00471	Cucumber (Chinese Long) v3	carcucB0695
Carg00471	Bottle gourd (USVL1VR-Ls)	carlsiB606
Carg00471	Watermelon (Charleston Gray)	carwcgB0649
Carg00471	Watermelon (97103) v1	carwmB0669
Carg00471	Watermelon (97103) v2	carwmbB0696
Carg00471	Wax gourd	carwgoB0788