Carg00305 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg00305
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	arabinosyltransferase XEG113
Location	Cucurbita_argyrosperma_scaffold_001 : 1685254 .. 1687391 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTATTCATTCCTTGGAAAATTCTGCAGGAGGTTACCTGTCATTTAAGCCATCAATCCCTAGGAACCTACTACTTGAAGGAGAGCATAACGTTGATACACACTTCATTCTTATTAACTACCAGGTTGTGTGTTCTAACAATAGACCTAAGTGTTTCTCATATGATGTCCTAAAACATCGCATTTCTGATTTTCTGCTTCGTGTTTTTTTTTTTCTTTCTGTCAGATGAAACAAATAAGAACTGCACTTGCAATTGCTTCATTATTGAATCGTACACTGGTAAGAACACTTGAATCCGATGGCAGTTTTTATTTAAGTTTCGCAATAGTTTCGTCACAGCAAGTATGTGTGTTTCTAATCGATCGAAACCACATCTCGTTGATGTTCATCGTCTCACTTGTGAACTCTAGATAATGCCTCAACTATGGTGCCGGTTAGATAGGCTATGGTTTGGACATCCCGGAGTTCTGCCGGGTTCAGTGACTCGACAACCTTTTATTTGCCCATTGGATCATGTTTTTGAGGTATCTCTAAACTTGTATTAATGTGATTTTCATCATCATGCTAGTCTAATTCCAAAACTAGATAGCTTCTATGGGATTGCAGGCATGGTAAGATTAGATGGCAATAATATTCATATTCAACTAATCTGCTACAGAAAGAACCATACATTCAACACACATTAATTTGACTTTAACCTGTCTGGTTGACTGCAAAAAGGGACATTTTTGTTCATTTATACTGTCGTTGTCCGAGATATGATATGTTTTTGTTCTTTTTTATGTCAAGCAGGTCAATGTGATGTTGAAAGACTTACCAGAGGAAGAGTTTGGCCCAGGAATCAACTTTAGAGAATATTCTTTCTTGGATAATCCATTACTCCCAAAACAGGTTAGTGACTGTACTGATTATAGAAACTGTTAGTTTTTCACTTTTTCTTGACTAATAGCATTTGCTGAGGAAGTTTTGCCTTGATTATGTCTTTAGGTGAAAGAATCATGGCTTGATGTTCATCTTTGTAAACAAGATAATGAAGATTGTCATGCATCAAATGATACGGTACATCCGGGCGTCCTCAAATTTCCTAAGGGCAGCAATGAAGACACGGTAATTAGTGCTTTTGACATATGAACTTTTTCACTCTAATAAAAAAGAGTCTATGAAACAACTCAAGCTCACCGCTAGCAAATATTATCTGCTTTGACCCATTACAAATGGTACCAAAGTCAGACACCGGGTGGTGTGCCAGCGAGGACGTTGGGCCCCTGTGGGTGGATTGTGAGGTCCCACGTCGGTTGGAGAGGGGAACGAAACATTCGTTATAAGAATGTGGAAACCTCTCCCTAATAGAGGCACATTTTAAAACCATGAGCCTAACAGCAATACATAACGAGCCAAAGCGGACAATATTTGCTAGCGGTGGGCTTGGGCCGTTATAGTTTAACCTTTTAGTAATACGATGATTGTATTACACAACTTGGATAAATATGCATCTTATACTTTCGAAAATTTTATGGGGCTGCGAACAATGGAACAGCACCGAGATTGAACGACTACTTTTGCAGTTCCAGAGCAACATATTAAAGATTTTACCTTTTAGTGCAGCCTTCGAATAGGTCGTCATTAATATTTTGTGATACGAGATGCCCGTTTTCGTGAAGGTTTAACCGTTAAAAATGCAGTTCTGGTTTGCTTCAGACATCTGTTTATGCATTCTAGGAATGAATCCCCTTTTGCTTGTTGCAAGTCTCCATTGAACTTACTCTATTATATTTGACGTTTTTCCTGTAGTTCAAGGCAATATTTTCCACTTTCAAGGATGTCAAAGTCATCCAGTTCTCAACGATGCAAGACGCTTTCCTTGGTTTCTCTGATAAGGTAACTAAAACATACCCTTTTCATCCATTTGATCAACAAACAGATTTCATGTCAAGTCTCATAAACATTAATTAAATTTTGATCGAACAGAAAAGGGAAGAGAAGTTCAGGAACCGTGTCAAGCGTTACGTTGGCATATGGTGTTGTGTGGAGAATACTACTATTGGCCACATATATTATGACATGTACTGGGATGAGACGCCCGATTGGAAACCACACCCACCTCGAACACCCGAGGAAGATCGACCACATTTTTAA

mRNA sequence

ATGTTTATTCATTCCTTGGAAAATTCTGCAGGAGGTTACCTGTCATTTAAGCCATCAATCCCTAGGAACCTACTACTTGAAGGAGAGCATAACGTTGATACACACTTCATTCTTATTAACTACCAGATGAAACAAATAAGAACTGCACTTGCAATTGCTTCATTATTGAATCGTACACTGATAATGCCTCAACTATGGTGCCGGTTAGATAGGCTATGGTTTGGACATCCCGGAGTTCTGCCGGGTTCAGTGACTCGACAACCTTTTATTTGCCCATTGGATCATGTTTTTGAGGTCAATGTGATGTTGAAAGACTTACCAGAGGAAGAGTTTGGCCCAGGAATCAACTTTAGAGAATATTCTTTCTTGGATAATCCATTACTCCCAAAACAGGTGAAAGAATCATGGCTTGATGTTCATCTTTGTAAACAAGATAATGAAGATTGTCATGCATCAAATGATACGTTCAAGGCAATATTTTCCACTTTCAAGGATGTCAAAGTCATCCAGTTCTCAACGATGCAAGACGCTTTCCTTGGTTTCTCTGATAAGAAAAGGGAAGAGAAGTTCAGGAACCGTGTCAAGCGTTACGTTGGCATATGGTGTTGTGTGGAGAATACTACTATTGGCCACATATATTATGACATGTACTGGGATGAGACGCCCGATTGGAAACCACACCCACCTCGAACACCCGAGGAAGATCGACCACATTTTTAA

Coding sequence (CDS)

ATGTTTATTCATTCCTTGGAAAATTCTGCAGGAGGTTACCTGTCATTTAAGCCATCAATCCCTAGGAACCTACTACTTGAAGGAGAGCATAACGTTGATACACACTTCATTCTTATTAACTACCAGATGAAACAAATAAGAACTGCACTTGCAATTGCTTCATTATTGAATCGTACACTGATAATGCCTCAACTATGGTGCCGGTTAGATAGGCTATGGTTTGGACATCCCGGAGTTCTGCCGGGTTCAGTGACTCGACAACCTTTTATTTGCCCATTGGATCATGTTTTTGAGGTCAATGTGATGTTGAAAGACTTACCAGAGGAAGAGTTTGGCCCAGGAATCAACTTTAGAGAATATTCTTTCTTGGATAATCCATTACTCCCAAAACAGGTGAAAGAATCATGGCTTGATGTTCATCTTTGTAAACAAGATAATGAAGATTGTCATGCATCAAATGATACGTTCAAGGCAATATTTTCCACTTTCAAGGATGTCAAAGTCATCCAGTTCTCAACGATGCAAGACGCTTTCCTTGGTTTCTCTGATAAGAAAAGGGAAGAGAAGTTCAGGAACCGTGTCAAGCGTTACGTTGGCATATGGTGTTGTGTGGAGAATACTACTATTGGCCACATATATTATGACATGTACTGGGATGAGACGCCCGATTGGAAACCACACCCACCTCGAACACCCGAGGAAGATCGACCACATTTTTAA

Protein sequence

MFIHSLENSAGGYLSFKPSIPRNLLLEGEHNVDTHFILINYQMKQIRTALAIASLLNRTLIMPQLWCRLDRLWFGHPGVLPGSVTRQPFICPLDHVFEVNVMLKDLPEEEFGPGINFREYSFLDNPLLPKQVKESWLDVHLCKQDNEDCHASNDTFKAIFSTFKDVKVIQFSTMQDAFLGFSDKKREEKFRNRVKRYVGIWCCVENTTIGHIYYDMYWDETPDWKPHPPRTPEEDRPHF

Homology

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BLAST of Carg00305 vs. NCBI nr
Match: XP_022941191.1 (arabinosyltransferase XEG113-like [Cucurbita moschata])

HSP 1 Score: 486.9 bits (1252), Expect = 4.0e-134
Identity = 229/248 (92.34%), Postives = 231/248 (93.15%), Query Frame = 0


Query: 8   NSAGGYLSFKPSIPRNLLLEGEHNVDTHFILINYQMKQIRTALAIASLLNRTLIMPQLWC 67
           ++ GGYLSFKPSIPRNLLLEGEHNVDTHFILINYQMKQIRTALAIASLLNRTLIMPQLWC
Sbjct: 394 DTPGGYLSFKPSIPRNLLLEGEHNVDTHFILINYQMKQIRTALAIASLLNRTLIMPQLWC 453

Query: 68  RLDRLWFGHPGVLPGSVTRQPFICPLDHVFEVNVMLKDLPEEEFGPGINFREYSFLDNPL 127
           RLDRLWFGHPGVLPGSVTRQPFICPLDHVFEVNVMLKDLPEEEFGPGINFREYSFLDNPL
Sbjct: 454 RLDRLWFGHPGVLPGSVTRQPFICPLDHVFEVNVMLKDLPEEEFGPGINFREYSFLDNPL 513

Query: 128 LPKQVKESWLDVHLCKQDNEDCHASN----------------DTFKAIFSTFKDVKVIQF 187
           LPKQVKESWLDVHLCKQDNEDCHASN                DTFKAIFSTFKDVKVIQF
Sbjct: 514 LPKQVKESWLDVHLCKQDNEDCHASNDTVHPGVLKFPKGSNEDTFKAIFSTFKDVKVIQF 573

Query: 188 STMQDAFLGFSDKKREEKFRNRVKRYVGIWCCVENTTIGHIYYDMYWDETPDWKPHPPRT 240
           STMQDAFLGFSDKKREEKFRNRVKRYVGIWCCVENTTIGHIYYDMYWDETPDWKPHPPRT
Sbjct: 574 STMQDAFLGFSDKKREEKFRNRVKRYVGIWCCVENTTIGHIYYDMYWDETPDWKPHPPRT 633

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BLAST of Carg00305 vs. NCBI nr
Match: XP_023525381.1 (arabinosyltransferase XEG113-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 478.8 bits (1231), Expect = 1.1e-131
Identity = 224/248 (90.32%), Postives = 229/248 (92.34%), Query Frame = 0


Query: 8   NSAGGYLSFKPSIPRNLLLEGEHNVDTHFILINYQMKQIRTALAIASLLNRTLIMPQLWC 67
           ++ GGY+SFKPSIPR+LLLEGEHNVDTHF LINYQMKQIRTALAIASLLNRTLIMPQLWC
Sbjct: 393 DTPGGYMSFKPSIPRSLLLEGEHNVDTHFTLINYQMKQIRTALAIASLLNRTLIMPQLWC 452

Query: 68  RLDRLWFGHPGVLPGSVTRQPFICPLDHVFEVNVMLKDLPEEEFGPGINFREYSFLDNPL 127
           RLDRLWFGHPGVLPGSVTRQPFICPLDHVFEVNVMLKDLPE EFGPGINFREYSFLDNPL
Sbjct: 453 RLDRLWFGHPGVLPGSVTRQPFICPLDHVFEVNVMLKDLPEGEFGPGINFREYSFLDNPL 512

Query: 128 LPKQVKESWLDVHLCKQDNEDCHASN----------------DTFKAIFSTFKDVKVIQF 187
           LPKQVKESWLDVH+CKQDNEDCHASN                DTFKAIFSTFKDVKVIQF
Sbjct: 513 LPKQVKESWLDVHICKQDNEDCHASNDTVHPGVLKFPKGSNEDTFKAIFSTFKDVKVIQF 572

Query: 188 STMQDAFLGFSDKKREEKFRNRVKRYVGIWCCVENTTIGHIYYDMYWDETPDWKPHPPRT 240
           STMQDAFLGFSDKKREEKFRNRVKRYVGIWCCVENTTIGHIYYDMYWDETPDWKPHPPRT
Sbjct: 573 STMQDAFLGFSDKKREEKFRNRVKRYVGIWCCVENTTIGHIYYDMYWDETPDWKPHPPRT 632

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BLAST of Carg00305 vs. NCBI nr
Match: XP_022981957.1 (arabinosyltransferase XEG113-like [Cucurbita maxima])

HSP 1 Score: 468.0 bits (1203), Expect = 1.9e-128
Identity = 220/248 (88.71%), Postives = 226/248 (91.13%), Query Frame = 0


Query: 8   NSAGGYLSFKPSIPRNLLLEGEHNVDTHFILINYQMKQIRTALAIASLLNRTLIMPQLWC 67
           ++ GGYLSFKPSIPRNLLLEGEHNVDTHFILINYQMKQIRTALAIASLLNRTLIMPQLWC
Sbjct: 394 DTPGGYLSFKPSIPRNLLLEGEHNVDTHFILINYQMKQIRTALAIASLLNRTLIMPQLWC 453

Query: 68  RLDRLWFGHPGVLPGSVTRQPFICPLDHVFEVNVMLKDLPEEEFGPGINFREYSFLDNPL 127
           RLDRLWFGHPGVLPGSVTRQPFICPLDHVFEVNVMLKDLPEEEFGPGINFREYSFL+NPL
Sbjct: 454 RLDRLWFGHPGVLPGSVTRQPFICPLDHVFEVNVMLKDLPEEEFGPGINFREYSFLNNPL 513

Query: 128 LPKQVKESWLDVHLCKQDNEDCHASN----------------DTFKAIFSTFKDVKVIQF 187
           LP QVKESWLDVHLCKQ +EDC  SN                DTFKAIFSTFKDVKVIQF
Sbjct: 514 LPNQVKESWLDVHLCKQGSEDCQPSNDTVHPGVLKFPKGSNEDTFKAIFSTFKDVKVIQF 573

Query: 188 STMQDAFLGFSDKKREEKFRNRVKRYVGIWCCVENTTIGHIYYDMYWDETPDWKPHPPRT 240
           STMQDAF GFSDKKREE+F+NRVKRYVGIWCCVENTTIGHIYYDMYWDETPDWKPHPPRT
Sbjct: 574 STMQDAFPGFSDKKREEQFKNRVKRYVGIWCCVENTTIGHIYYDMYWDETPDWKPHPPRT 633

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BLAST of Carg00305 vs. NCBI nr
Match: XP_008444233.1 (PREDICTED: arabinosyltransferase XEG113 [Cucumis melo])

HSP 1 Score: 444.5 bits (1142), Expect = 2.3e-121
Identity = 209/246 (84.96%), Postives = 218/246 (88.62%), Query Frame = 0


Query: 8   NSAGGYLSFKPSIPRNLLLEGEHNVDTHFILINYQMKQIRTALAIASLLNRTLIMPQLWC 67
           ++ GGYLSFKPSIP+NL+LEGEHN+DTHF LINYQMKQIRTALAIASLLNRTLIMP LWC
Sbjct: 393 DAPGGYLSFKPSIPKNLILEGEHNLDTHFTLINYQMKQIRTALAIASLLNRTLIMPPLWC 452

Query: 68  RLDRLWFGHPGVLPGSVTRQPFICPLDHVFEVNVMLKDLPEEEFGPGINFREYSFLDNPL 127
           RLDRLWFGHPGVL GSVTRQPFICPLDHVFEVNVMLK+LPE EFGPGINFREYSFL+NPL
Sbjct: 453 RLDRLWFGHPGVLQGSVTRQPFICPLDHVFEVNVMLKELPEAEFGPGINFREYSFLENPL 512

Query: 128 LPKQVKESWLDVHLCKQDNEDCHASN----------------DTFKAIFSTFKDVKVIQF 187
           LPKQVKESWLDVHLCKQ++E C ASN                DTFKAIFSTFKDVKVIQF
Sbjct: 513 LPKQVKESWLDVHLCKQESEGCSASNDTVLPGVLKFPKGSNEDTFKAIFSTFKDVKVIQF 572

Query: 188 STMQDAFLGFSDKKREEKFRNRVKRYVGIWCCVENTTIGHIYYDMYWDETPDWKPHPPRT 238
           STMQDAF GFSDKKREEKFRNRVKRYVGIWCCVEN   GHIYYDMYWDE PDWKPHPPRT
Sbjct: 573 STMQDAFPGFSDKKREEKFRNRVKRYVGIWCCVENAAPGHIYYDMYWDEKPDWKPHPPRT 632

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BLAST of Carg00305 vs. NCBI nr
Match: XP_004142646.1 (PREDICTED: uncharacterized protein LOC101203732 [Cucumis sativus] >KGN54526.1 hypothetical protein Csa_4G358640 [Cucumis sativus])

HSP 1 Score: 439.5 bits (1129), Expect = 7.3e-120
Identity = 207/246 (84.15%), Postives = 218/246 (88.62%), Query Frame = 0


Query: 8   NSAGGYLSFKPSIPRNLLLEGEHNVDTHFILINYQMKQIRTALAIASLLNRTLIMPQLWC 67
           ++ GGYLSFKPSIP+NL+LEGEHN+DTHF LINYQMKQIRTALAIASLLNRTLIMP LWC
Sbjct: 393 DAPGGYLSFKPSIPKNLVLEGEHNLDTHFTLINYQMKQIRTALAIASLLNRTLIMPPLWC 452

Query: 68  RLDRLWFGHPGVLPGSVTRQPFICPLDHVFEVNVMLKDLPEEEFGPGINFREYSFLDNPL 127
           RLDRLWFGHPGVL GSVTRQPFICPLDHVFEVNVMLK+LPEEEFGPGI+FREYSFL+NPL
Sbjct: 453 RLDRLWFGHPGVLQGSVTRQPFICPLDHVFEVNVMLKELPEEEFGPGIDFREYSFLENPL 512

Query: 128 LPKQVKESWLDVHLCKQDNEDCHASN----------------DTFKAIFSTFKDVKVIQF 187
           LPKQVKESWLDV LCKQ++E C ASN                DTFKAIFSTFKDVKVIQF
Sbjct: 513 LPKQVKESWLDVQLCKQESEGCSASNDTVLPGVLKFPKGSNEDTFKAIFSTFKDVKVIQF 572

Query: 188 STMQDAFLGFSDKKREEKFRNRVKRYVGIWCCVENTTIGHIYYDMYWDETPDWKPHPPRT 238
           STMQDAF GFSDKKREEKFRNRVKRYVGIWCCVEN   GHIYYDMYWDE P+WKPHPPRT
Sbjct: 573 STMQDAFPGFSDKKREEKFRNRVKRYVGIWCCVENAAPGHIYYDMYWDEKPNWKPHPPRT 632

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BLAST of Carg00305 vs. TAIR10
Match: AT2G35610.1 (xyloglucanase 113)

HSP 1 Score: 396.0 bits (1016), Expect = 1.7e-110
Identity = 179/246 (72.76%), Postives = 209/246 (84.96%), Query Frame = 0


Query: 8   NSAGGYLSFKPSIPRNLLLEGEHNVDTHFILINYQMKQIRTALAIASLLNRTLIMPQLWC 67
           +S GG+++FKPSIP++LLL+G+H +++HFIL+N+QMKQIR+ALAIASLLNRTL+MP +WC
Sbjct: 397 DSPGGFIAFKPSIPKSLLLDGKHTIESHFILVNHQMKQIRSALAIASLLNRTLVMPPIWC 456

Query: 68  RLDRLWFGHPGVLPGSVTRQPFICPLDHVFEVNVMLKDLPEEEFGPGINFREYSFLDNPL 127
           RLDRLWFGHPG L GS+TRQPFICPLDHVFEVN+MLK+LPEEEFGPGI  REYSFLDNPL
Sbjct: 457 RLDRLWFGHPGTLQGSMTRQPFICPLDHVFEVNIMLKELPEEEFGPGIGIREYSFLDNPL 516

Query: 128 LPKQVKESWLDVHLCKQDNEDCHASN----------------DTFKAIFSTFKDVKVIQF 187
           LPKQVKESWLDV LC++  E C ASN                DTFKAIFS+F DVKVI+F
Sbjct: 517 LPKQVKESWLDVQLCQEGKEGCEASNNTSPSRVLKFPKRSNEDTFKAIFSSFDDVKVIKF 576

Query: 188 STMQDAFLGFSDKKREEKFRNRVKRYVGIWCCVENTTIGHIYYDMYWDETPDWKPHPPRT 238
           S+++DAF+GFSDK+REE+FR RVKRYVGIWCC EN T GHIYYDMYWDE P WKP PP+T
Sbjct: 577 SSIEDAFIGFSDKEREERFRRRVKRYVGIWCCEENKTPGHIYYDMYWDEKPGWKPVPPQT 636

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BLAST of Carg00305 vs. Swiss-Prot
Match: sp|Q8VXZ5|XG113_ARATH (Arabinosyltransferase XEG113 OS=Arabidopsis thaliana OX=3702 GN=XEG113 PE=2 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 3.0e-109
Identity = 179/246 (72.76%), Postives = 209/246 (84.96%), Query Frame = 0


Query: 8   NSAGGYLSFKPSIPRNLLLEGEHNVDTHFILINYQMKQIRTALAIASLLNRTLIMPQLWC 67
           +S GG+++FKPSIP++LLL+G+H +++HFIL+N+QMKQIR+ALAIASLLNRTL+MP +WC
Sbjct: 397 DSPGGFIAFKPSIPKSLLLDGKHTIESHFILVNHQMKQIRSALAIASLLNRTLVMPPIWC 456

Query: 68  RLDRLWFGHPGVLPGSVTRQPFICPLDHVFEVNVMLKDLPEEEFGPGINFREYSFLDNPL 127
           RLDRLWFGHPG L GS+TRQPFICPLDHVFEVN+MLK+LPEEEFGPGI  REYSFLDNPL
Sbjct: 457 RLDRLWFGHPGTLQGSMTRQPFICPLDHVFEVNIMLKELPEEEFGPGIGIREYSFLDNPL 516

Query: 128 LPKQVKESWLDVHLCKQDNEDCHASN----------------DTFKAIFSTFKDVKVIQF 187
           LPKQVKESWLDV LC++  E C ASN                DTFKAIFS+F DVKVI+F
Sbjct: 517 LPKQVKESWLDVQLCQEGKEGCEASNNTSPSRVLKFPKRSNEDTFKAIFSSFDDVKVIKF 576

Query: 188 STMQDAFLGFSDKKREEKFRNRVKRYVGIWCCVENTTIGHIYYDMYWDETPDWKPHPPRT 238
           S+++DAF+GFSDK+REE+FR RVKRYVGIWCC EN T GHIYYDMYWDE P WKP PP+T
Sbjct: 577 SSIEDAFIGFSDKEREERFRRRVKRYVGIWCCEENKTPGHIYYDMYWDEKPGWKPVPPQT 636

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BLAST of Carg00305 vs. TrEMBL
Match: tr|A0A1S3BAN6|A0A1S3BAN6_CUCME (arabinosyltransferase XEG113 OS=Cucumis melo OX=3656 GN=LOC103487624 PE=4 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 1.5e-121
Identity = 209/246 (84.96%), Postives = 218/246 (88.62%), Query Frame = 0


Query: 8   NSAGGYLSFKPSIPRNLLLEGEHNVDTHFILINYQMKQIRTALAIASLLNRTLIMPQLWC 67
           ++ GGYLSFKPSIP+NL+LEGEHN+DTHF LINYQMKQIRTALAIASLLNRTLIMP LWC
Sbjct: 393 DAPGGYLSFKPSIPKNLILEGEHNLDTHFTLINYQMKQIRTALAIASLLNRTLIMPPLWC 452

Query: 68  RLDRLWFGHPGVLPGSVTRQPFICPLDHVFEVNVMLKDLPEEEFGPGINFREYSFLDNPL 127
           RLDRLWFGHPGVL GSVTRQPFICPLDHVFEVNVMLK+LPE EFGPGINFREYSFL+NPL
Sbjct: 453 RLDRLWFGHPGVLQGSVTRQPFICPLDHVFEVNVMLKELPEAEFGPGINFREYSFLENPL 512

Query: 128 LPKQVKESWLDVHLCKQDNEDCHASN----------------DTFKAIFSTFKDVKVIQF 187
           LPKQVKESWLDVHLCKQ++E C ASN                DTFKAIFSTFKDVKVIQF
Sbjct: 513 LPKQVKESWLDVHLCKQESEGCSASNDTVLPGVLKFPKGSNEDTFKAIFSTFKDVKVIQF 572

Query: 188 STMQDAFLGFSDKKREEKFRNRVKRYVGIWCCVENTTIGHIYYDMYWDETPDWKPHPPRT 238
           STMQDAF GFSDKKREEKFRNRVKRYVGIWCCVEN   GHIYYDMYWDE PDWKPHPPRT
Sbjct: 573 STMQDAFPGFSDKKREEKFRNRVKRYVGIWCCVENAAPGHIYYDMYWDEKPDWKPHPPRT 632

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BLAST of Carg00305 vs. TrEMBL
Match: tr|A0A0A0L348|A0A0A0L348_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G358640 PE=4 SV=1)

HSP 1 Score: 439.5 bits (1129), Expect = 4.8e-120
Identity = 207/246 (84.15%), Postives = 218/246 (88.62%), Query Frame = 0


Query: 8   NSAGGYLSFKPSIPRNLLLEGEHNVDTHFILINYQMKQIRTALAIASLLNRTLIMPQLWC 67
           ++ GGYLSFKPSIP+NL+LEGEHN+DTHF LINYQMKQIRTALAIASLLNRTLIMP LWC
Sbjct: 393 DAPGGYLSFKPSIPKNLVLEGEHNLDTHFTLINYQMKQIRTALAIASLLNRTLIMPPLWC 452

Query: 68  RLDRLWFGHPGVLPGSVTRQPFICPLDHVFEVNVMLKDLPEEEFGPGINFREYSFLDNPL 127
           RLDRLWFGHPGVL GSVTRQPFICPLDHVFEVNVMLK+LPEEEFGPGI+FREYSFL+NPL
Sbjct: 453 RLDRLWFGHPGVLQGSVTRQPFICPLDHVFEVNVMLKELPEEEFGPGIDFREYSFLENPL 512

Query: 128 LPKQVKESWLDVHLCKQDNEDCHASN----------------DTFKAIFSTFKDVKVIQF 187
           LPKQVKESWLDV LCKQ++E C ASN                DTFKAIFSTFKDVKVIQF
Sbjct: 513 LPKQVKESWLDVQLCKQESEGCSASNDTVLPGVLKFPKGSNEDTFKAIFSTFKDVKVIQF 572

Query: 188 STMQDAFLGFSDKKREEKFRNRVKRYVGIWCCVENTTIGHIYYDMYWDETPDWKPHPPRT 238
           STMQDAF GFSDKKREEKFRNRVKRYVGIWCCVEN   GHIYYDMYWDE P+WKPHPPRT
Sbjct: 573 STMQDAFPGFSDKKREEKFRNRVKRYVGIWCCVENAAPGHIYYDMYWDEKPNWKPHPPRT 632

[Close]

BLAST of Carg00305 vs. TrEMBL
Match: tr|A0A2I4EPW1|A0A2I4EPW1_9ROSI (arabinosyltransferase XEG113 OS=Juglans regia OX=51240 GN=LOC108991574 PE=4 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 2.2e-109
Identity = 182/246 (73.98%), Postives = 211/246 (85.77%), Query Frame = 0


Query: 8   NSAGGYLSFKPSIPRNLLLEGEHNVDTHFILINYQMKQIRTALAIASLLNRTLIMPQLWC 67
           NS GG+LSF+PSIP++LLL+GEHN+++HF L+NYQMKQIRTALAIASLLNRTL+MP LWC
Sbjct: 395 NSPGGFLSFRPSIPKSLLLDGEHNIESHFSLVNYQMKQIRTALAIASLLNRTLVMPPLWC 454

Query: 68  RLDRLWFGHPGVLPGSVTRQPFICPLDHVFEVNVMLKDLPEEEFGPGINFREYSFLDNPL 127
           RLDRLWF HPG+L GS+TRQPF+CPLDHVFEVNVMLK++P+EEFGPGI+ REY+FLDNP 
Sbjct: 455 RLDRLWFAHPGILQGSMTRQPFVCPLDHVFEVNVMLKEMPDEEFGPGIDIREYTFLDNPS 514

Query: 128 LPKQVKESWLDVHLCKQDNEDCHASND----------------TFKAIFSTFKDVKVIQF 187
           +PKQVKESWLDV LC++   DC ASND                TFKAIFS+FKDVKVIQF
Sbjct: 515 MPKQVKESWLDVQLCQEGTRDCRASNDTSSPGIIRFPKHSNEETFKAIFSSFKDVKVIQF 574

Query: 188 STMQDAFLGFSDKKREEKFRNRVKRYVGIWCCVENTTIGHIYYDMYWDETPDWKPHPPRT 238
           S+MQDAFLGFSDK RE++FRNRVKRYVGIWCCV++ T GHIYYDMYWDE P WKP PP+T
Sbjct: 575 SSMQDAFLGFSDKTREQRFRNRVKRYVGIWCCVDHHTPGHIYYDMYWDEKPGWKPIPPKT 634

[Close]

BLAST of Carg00305 vs. TrEMBL
Match: tr|A0A061G711|A0A061G711_THECC (Xyloglucanase 113 isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_016700 PE=4 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 5.5e-108
Identity = 185/248 (74.60%), Postives = 210/248 (84.68%), Query Frame = 0


Query: 8   NSAGGYLSFKPSIPRNLLLEGEHNVDTHFILINYQMKQIRTALAIASLLNRTLIMPQLWC 67
           ++ GG+LSFKPSIP++LLLEGE+N+++HF LINYQMKQIR+ALAIASLLNRTL+MP LWC
Sbjct: 389 DAPGGFLSFKPSIPKSLLLEGENNLESHFSLINYQMKQIRSALAIASLLNRTLVMPPLWC 448

Query: 68  RLDRLWFGHPGVLPGSVTRQPFICPLDHVFEVNVMLKDLPEEEFGPGINFREYSFLDNPL 127
           RLDRLWF HPGVL GS+TRQPF+CPLDHVFEVNVMLKDLP EEFGP IN REYSFL+NPL
Sbjct: 449 RLDRLWFPHPGVLVGSMTRQPFLCPLDHVFEVNVMLKDLPVEEFGPAINIREYSFLNNPL 508

Query: 128 LPKQVKESWLDVHLCKQDNEDCHASN----------------DTFKAIFSTFKDVKVIQF 187
           LP+QVKE WLDV LC++  EDCHAS+                +TFK +FS FKDVKVIQF
Sbjct: 509 LPQQVKELWLDVQLCQEGTEDCHASSNTSRPGLLRFPKHSGEETFKTVFSAFKDVKVIQF 568

Query: 188 STMQDAFLGFSDKKREEKFRNRVKRYVGIWCCVENTTIGHIYYDMYWDETPDWKPHPPRT 240
           S+MQDAFLGFSDK REEKFRNRVKRYVGIWCCV++ T GHIYYDMYWDE P WKP PP+T
Sbjct: 569 SSMQDAFLGFSDKTREEKFRNRVKRYVGIWCCVDSHTPGHIYYDMYWDEKPGWKPAPPQT 628

[Close]

BLAST of Carg00305 vs. TrEMBL
Match: tr|A0A2C9U3A2|A0A2C9U3A2_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_17G001100 PE=4 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 7.2e-108
Identity = 184/246 (74.80%), Postives = 209/246 (84.96%), Query Frame = 0


Query: 8   NSAGGYLSFKPSIPRNLLLEGEHNVDTHFILINYQMKQIRTALAIASLLNRTLIMPQLWC 67
           ++ GG+LSFKPSIP++LLL+GEHN+++HF LINYQ+KQIR+ALAIASLLNRTL+MP LWC
Sbjct: 397 DAPGGFLSFKPSIPKSLLLDGEHNLESHFSLINYQIKQIRSALAIASLLNRTLVMPPLWC 456

Query: 68  RLDRLWFGHPGVLPGSVTRQPFICPLDHVFEVNVMLKDLPEEEFGPGINFREYSFLDNPL 127
           RLDRLWF HPGVL G++TRQPFICPLDHVFEVNVMLK LPEEEFGPGI+ REYSFLDNP 
Sbjct: 457 RLDRLWFSHPGVLKGTMTRQPFICPLDHVFEVNVMLKQLPEEEFGPGISIREYSFLDNPS 516

Query: 128 LPKQVKESWLDVHLCKQDNEDCHASNDT----------------FKAIFSTFKDVKVIQF 187
           LPKQVKESWLDV LC++  +DC ASN T                FK IFS+FK+VKVIQF
Sbjct: 517 LPKQVKESWLDVQLCQEGTQDCFASNKTSSSGVLRFPNHSNEEMFKTIFSSFKEVKVIQF 576

Query: 188 STMQDAFLGFSDKKREEKFRNRVKRYVGIWCCVENTTIGHIYYDMYWDETPDWKPHPPRT 238
           S++QDAFLGF+DKK EEKFRNRVKRYVGIWCCVEN T GHIYYDMYWD+ PDWKP PP T
Sbjct: 577 SSVQDAFLGFTDKKIEEKFRNRVKRYVGIWCCVENHTPGHIYYDMYWDDKPDWKPMPPET 636

The following BLAST results are available for this feature:

BLAST of Carg00305 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022941191.1	4.0e-134	92.34	arabinosyltransferase XEG113-like [Cucurbita moschata]	[more]
XP_023525381.1	1.1e-131	90.32	arabinosyltransferase XEG113-like [Cucurbita pepo subsp. pepo]	[more]
XP_022981957.1	1.9e-128	88.71	arabinosyltransferase XEG113-like [Cucurbita maxima]	[more]
XP_008444233.1	2.3e-121	84.96	PREDICTED: arabinosyltransferase XEG113 [Cucumis melo]	[more]
XP_004142646.1	7.3e-120	84.15	PREDICTED: uncharacterized protein LOC101203732 [Cucumis sativus] >KGN54526.1 hy...	[more]

BLAST of Carg00305 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G35610.1	1.7e-110	72.76	xyloglucanase 113	[more]

BLAST of Carg00305 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8VXZ5\|XG113_ARATH	3.0e-109	72.76	Arabinosyltransferase XEG113 OS=Arabidopsis thaliana OX=3702 GN=XEG113 PE=2 SV=1	[more]

BLAST of Carg00305 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BAN6\|A0A1S3BAN6_CUCME	1.5e-121	84.96	arabinosyltransferase XEG113 OS=Cucumis melo OX=3656 GN=LOC103487624 PE=4 SV=1	[more]
tr\|A0A0A0L348\|A0A0A0L348_CUCSA	4.8e-120	84.15	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G358640 PE=4 SV=1	[more]
tr\|A0A2I4EPW1\|A0A2I4EPW1_9ROSI	2.2e-109	73.98	arabinosyltransferase XEG113 OS=Juglans regia OX=51240 GN=LOC108991574 PE=4 SV=1	[more]
tr\|A0A061G711\|A0A061G711_THECC	5.5e-108	74.60	Xyloglucanase 113 isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_016700 PE=4 SV=1	[more]
tr\|A0A2C9U3A2\|A0A2C9U3A2_MANES	7.2e-108	74.80	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_17G001100 PE=4 SV=...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg00305-RA	Carg00305-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR10994	RETICULON	coord: 8..157
None	No IPR available	PANTHER	PTHR10994:SF69	ARABINOSYLTRANSFERASE XEG113	coord: 8..157

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg00305	Cla023200	Watermelon (97103) v1	carwmB0672
Carg00305	Csa4G358640	Cucumber (Chinese Long) v2	carcuB0688
Carg00305	MELO3C010524	Melon (DHL92) v3.5.1	carmeB0673
Carg00305	ClCG11G016080	Watermelon (Charleston Gray)	carwcgB0647
Carg00305	CSPI04G17420	Wild cucumber (PI 183967)	carcpiB0699
Carg00305	Cucsa.018320	Cucumber (Gy14) v1	carcgyB0749
Carg00305	CmaCh01G013600	Cucurbita maxima (Rimu)	carcmaB0947
Carg00305	CmaCh09G007640	Cucurbita maxima (Rimu)	carcmaB0932
Carg00305	CmoCh01G014120	Cucurbita moschata (Rifu)	carcmoB0922
Carg00305	CmoCh09G007540	Cucurbita moschata (Rifu)	carcmoB0906
Carg00305	Lsi04G018450	Bottle gourd (USVL1VR-Ls)	carlsiB612
Carg00305	Cp4.1LG02g03110	Cucurbita pepo (Zucchini)	carcpeB0943
Carg00305	Cp4.1LG06g06120	Cucurbita pepo (Zucchini)	carcpeB0947
Carg00305	CsGy4G016620	Cucumber (Gy14) v2	carcgybB0663
Carg00305	MELO3C010524.2	Melon (DHL92) v3.6.1	carmedB0685
Carg00305	CsaV3_4G027890	Cucumber (Chinese Long) v3	carcucB0701
Carg00305	Cla97C11G222060	Watermelon (97103) v2	carwmbB0692
Carg00305	Bhi09G002285	Wax gourd	carwgoB0789

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg00305	Carg20079	Silver-seed gourd	carcarB574

The following block(s) are covering this gene:

None